I: pbuilder: network access will be disabled during build
I: Current time: Sun May 19 12:31:57 +14 2024
I: pbuilder-time-stamp: 1716071517
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [seqan2_2.4.0+dfsg-16.dsc]
I: copying [./seqan2_2.4.0+dfsg.orig.tar.xz]
I: copying [./seqan2_2.4.0+dfsg-16.debian.tar.xz]
I: Extracting source
gpgv: Signature made Mon Jan 15 15:26:25 2024 
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./seqan2_2.4.0+dfsg-16.dsc: no acceptable signature found
dpkg-source: info: extracting seqan2 in seqan2-2.4.0+dfsg
dpkg-source: info: unpacking seqan2_2.4.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking seqan2_2.4.0+dfsg-16.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying spelling
dpkg-source: info: applying skip-seqan-revision
dpkg-source: info: applying fix-version_check-test
dpkg-source: info: applying skip-some-apps-on-some-archs
dpkg-source: info: applying tweak_readmes
dpkg-source: info: applying install_fiona_illumina
dpkg-source: info: applying ctdVersion.patch
dpkg-source: info: applying fix_manpage_formatting.patch
dpkg-source: info: applying no-unaligned-access.patch
dpkg-source: info: applying ia64_yield
dpkg-source: info: applying python3
dpkg-source: info: applying fix_python3_tests
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/1262419/tmp/hooks/D01_modify_environment starting
debug: Running on infom01-amd64.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
'/bin/sh' -> '/bin/bash'
lrwxrwxrwx 1 root root 9 May 18 22:32 /bin/sh -> /bin/bash
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/1262419/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/1262419/tmp/hooks/D02_print_environment starting
I: set
  BASH=/bin/sh
  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
  BASH_ALIASES=()
  BASH_ARGC=()
  BASH_ARGV=()
  BASH_CMDS=()
  BASH_LINENO=([0]="12" [1]="0")
  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
  BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
  BASH_VERSION='5.2.21(1)-release'
  BUILDDIR=/build/reproducible-path
  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
  BUILDUSERNAME=pbuilder2
  BUILD_ARCH=amd64
  DEBIAN_FRONTEND=noninteractive
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 '
  DIRSTACK=()
  DISTRIBUTION=unstable
  EUID=0
  FUNCNAME=([0]="Echo" [1]="main")
  GROUPS=()
  HOME=/root
  HOSTNAME=i-capture-the-hostname
  HOSTTYPE=x86_64
  HOST_ARCH=amd64
  IFS=' 	
  '
  INVOCATION_ID=b39818f6d7bc48c49f6ffe7570a607bd
  LANG=C
  LANGUAGE=et_EE:et
  LC_ALL=C
  MACHTYPE=x86_64-pc-linux-gnu
  MAIL=/var/mail/root
  OPTERR=1
  OPTIND=1
  OSTYPE=linux-gnu
  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
  PBCURRENTCOMMANDLINEOPERATION=build
  PBUILDER_OPERATION=build
  PBUILDER_PKGDATADIR=/usr/share/pbuilder
  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
  PBUILDER_SYSCONFDIR=/etc
  PIPESTATUS=([0]="0")
  POSIXLY_CORRECT=y
  PPID=1262419
  PS4='+ '
  PWD=/
  SHELL=/bin/bash
  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
  SHLVL=3
  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zSltXL3G/pbuilderrc_PFRb --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zSltXL3G/b2 --logfile b2/build.log seqan2_2.4.0+dfsg-16.dsc'
  SUDO_GID=109
  SUDO_UID=104
  SUDO_USER=jenkins
  TERM=unknown
  TZ=/usr/share/zoneinfo/Etc/GMT-14
  UID=0
  USER=root
  _='I: set'
I: uname -a
  Linux i-capture-the-hostname 6.1.0-21-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 May 18 07:42 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/1262419/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), python3, cmake, fakeroot, zlib1g-dev, libbz2-dev, libbam-dev, libboost-dev, help2man, ctdconverter
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19718 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on python3; however:
  Package python3 is not installed.
 pbuilder-satisfydepends-dummy depends on cmake; however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on zlib1g-dev; however:
  Package zlib1g-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libbz2-dev; however:
  Package libbz2-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libbam-dev; however:
  Package libbam-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libboost-dev; however:
  Package libboost-dev is not installed.
 pbuilder-satisfydepends-dummy depends on help2man; however:
  Package help2man is not installed.
 pbuilder-satisfydepends-dummy depends on ctdconverter; however:
  Package ctdconverter is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} ctdconverter{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbam-dev{a} libboost-dev{a} libboost1.83-dev{a} libbrotli1{a} libbz2-dev{a} libcom-err2{a} libcurl4t64{a} libdata-optlist-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libparams-util-perl{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-install-perl{a} libsub-override-perl{a} libsub-prototype-perl{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} libxslt1.1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} procps{a} python3{a} python3-ctdopts{a} python3-lxml{a} python3-minimal{a} python3-pkg-resources{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  bzip2-doc ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix python3-bs4 python3-cssselect python3-html5lib wget 
0 packages upgraded, 85 newly installed, 0 to remove and 0 not upgraded.
Need to get 56.2 MB of archives. After unpacking 332 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-7 [15.0 kB]
Get: 2 http://deb.debian.org/debian unstable/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB]
Get: 3 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB]
Get: 4 http://deb.debian.org/debian unstable/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB]
Get: 5 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB]
Get: 6 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB]
Get: 7 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB]
Get: 8 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024a-4 [255 kB]
Get: 9 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-4 [69.3 kB]
Get: 10 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-4 [167 kB]
Get: 11 http://deb.debian.org/debian unstable/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB]
Get: 12 http://deb.debian.org/debian unstable/main amd64 python3.11 amd64 3.11.9-1 [602 kB]
Get: 13 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B]
Get: 14 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.11.8-1 [27.4 kB]
Get: 15 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-4 [64.6 kB]
Get: 16 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-4 [880 kB]
Get: 17 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB]
Get: 18 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB]
Get: 19 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB]
Get: 20 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB]
Get: 21 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB]
Get: 22 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB]
Get: 23 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB]
Get: 24 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.1-1 [94.1 kB]
Get: 25 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB]
Get: 26 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB]
Get: 27 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB]
Get: 28 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB]
Get: 29 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 30 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB]
Get: 31 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.21-14 [496 kB]
Get: 32 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB]
Get: 33 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB]
Get: 34 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.2-2 [346 kB]
Get: 35 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB]
Get: 36 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB]
Get: 37 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1~rc2-1 [22.6 kB]
Get: 38 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB]
Get: 39 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B]
Get: 40 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB]
Get: 41 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB]
Get: 42 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB]
Get: 43 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB]
Get: 44 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB]
Get: 45 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB]
Get: 46 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB]
Get: 47 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB]
Get: 48 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB]
Get: 49 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.7.1-5 [441 kB]
Get: 50 http://deb.debian.org/debian unstable/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB]
Get: 51 http://deb.debian.org/debian unstable/main amd64 librhash0 amd64 1.4.3-3+b1 [132 kB]
Get: 52 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-4 [148 kB]
Get: 53 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.29.3-1 [2167 kB]
Get: 54 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.29.3-1+b1 [10.7 MB]
Get: 55 http://deb.debian.org/debian unstable/main amd64 python3-ctdopts all 1.5-2 [22.3 kB]
Get: 56 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1+b1 [232 kB]
Get: 57 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.2.1-1 [1995 kB]
Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB]
Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-ruamel.yaml.clib amd64 0.2.8+ds-1 [188 kB]
Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-ruamel.yaml all 0.18.6+ds-3 [145 kB]
Get: 61 http://deb.debian.org/debian unstable/main amd64 ctdconverter all 2.1-6 [27.7 kB]
Get: 62 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB]
Get: 63 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB]
Get: 64 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 65 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 66 http://deb.debian.org/debian unstable/main amd64 libparams-util-perl amd64 1.102-3 [24.0 kB]
Get: 67 http://deb.debian.org/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB]
Get: 68 http://deb.debian.org/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB]
Get: 69 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB]
Get: 70 http://deb.debian.org/debian unstable/main amd64 libsub-prototype-perl amd64 0.03-2+b2 [9744 B]
Get: 71 http://deb.debian.org/debian unstable/main amd64 libsub-override-perl all 0.11-1 [10.4 kB]
Get: 72 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 73 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 74 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB]
Get: 75 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 76 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB]
Get: 77 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 78 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 79 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.15.3 [901 kB]
Get: 80 http://deb.debian.org/debian unstable/main amd64 help2man amd64 1.49.3 [198 kB]
Get: 81 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB]
Get: 82 http://deb.debian.org/debian unstable/main amd64 libbam-dev amd64 0.1.19+dfsg-6 [118 kB]
Get: 83 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-2.1+b1 [10.6 MB]
Get: 84 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B]
Get: 85 http://deb.debian.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-5.1 [31.3 kB]
Fetched 56.2 MB in 1s (106 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package liblocale-gettext-perl.
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(Reading database ... 19718 files and directories currently installed.)
Preparing to unpack .../liblocale-gettext-perl_1.07-7_amd64.deb ...
Unpacking liblocale-gettext-perl (1.07-7) ...
Selecting previously unselected package libpython3.11-minimal:amd64.
Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ...
Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ...
Selecting previously unselected package libexpat1:amd64.
Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ...
Unpacking libexpat1:amd64 (2.6.2-1) ...
Selecting previously unselected package python3.11-minimal.
Preparing to unpack .../python3.11-minimal_3.11.9-1_amd64.deb ...
Unpacking python3.11-minimal (3.11.9-1) ...
Setting up libpython3.11-minimal:amd64 (3.11.9-1) ...
Setting up libexpat1:amd64 (2.6.2-1) ...
Setting up python3.11-minimal (3.11.9-1) ...
Selecting previously unselected package python3-minimal.
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(Reading database ... 20048 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.11.8-1_amd64.deb ...
Unpacking python3-minimal (3.11.8-1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_10.1.0_all.deb ...
Unpacking media-types (10.1.0) ...
Selecting previously unselected package netbase.
Preparing to unpack .../2-netbase_6.4_all.deb ...
Unpacking netbase (6.4) ...
Selecting previously unselected package tzdata.
Preparing to unpack .../3-tzdata_2024a-4_all.deb ...
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Current default time zone: 'Etc/UTC'
Local time is now:      Sat May 18 22:33:48 UTC 2024.
Universal Time is now:  Sat May 18 22:33:48 UTC 2024.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

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Reading package lists...
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 -> Finished parsing the build-deps
I: Building the package
I: user script /srv/workspace/pbuilder/1262419/tmp/hooks/A99_set_merged_usr starting
Not re-configuring usrmerge for unstable
I: user script /srv/workspace/pbuilder/1262419/tmp/hooks/A99_set_merged_usr finished
hostname: Name or service not known
I: Running cd /build/reproducible-path/seqan2-2.4.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../seqan2_2.4.0+dfsg-16_source.changes
dpkg-buildpackage: info: source package seqan2
dpkg-buildpackage: info: source version 2.4.0+dfsg-16
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
 debian/rules clean
dh clean
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
dh_auto_clean
find . -type f -name "*.pyc" -delete
if [ -d orig ] ; then \
  for header in `find orig -name "*generated_forwards.h"` ; do \
    mv ${header} `echo $header | sed 's?orig/??'` ; \
  done ; \
fi
rm -rf orig
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
   dh_clean
	rm -f debian/debhelper-build-stamp
	rm -rf debian/.debhelper/
	rm -f -- debian/seqan-apps.substvars debian/libseqan2-dev.substvars debian/files
	rm -fr -- debian/seqan-apps/ debian/tmp/ debian/libseqan2-dev/
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \)
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   debian/rules override_dh_auto_configure-arch
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
# Test seems to fail temporarily (see bug #1058548)
find . -name "solution_online_search_finder.cpp*" -delete
export DEB_BUILD_ARCH=amd64 ; \
dh_auto_configure --arch -- \
	-DSEQAN_STATIC_APPS=False -DSEQAN_NO_DOX=1 \
	-DSEQAN_DISABLE_VERSION_CHECK=YES
	cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DSEQAN_STATIC_APPS=False -DSEQAN_NO_DOX=1 -DSEQAN_DISABLE_VERSION_CHECK=YES ..
CMake Warning (dev) at CMakeLists.txt:9 (project):
  cmake_minimum_required() should be called prior to this top-level project()
  call.  Please see the cmake-commands(7) manual for usage documentation of
  both commands.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- The CXX compiler identification is GNU 13.2.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at CMakeLists.txt:16 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Initializing SeqAn Build System...
-- Scanning dependencies once in DEVELOP mode...
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.3.1")
-- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8")
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found version "1.83.0")
-- Performing Test CXX14_BUILTIN
-- Performing Test CXX14_BUILTIN - Success
CMake Warning (dev) at util/cmake/seqan-config.cmake:218 (EXEC_PROGRAM):
  Policy CMP0153 is not set: The exec_program command should not be called.
  Run "cmake --help-policy CMP0153" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.

  Use execute_process() instead.
Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:360 (find_package)
  CMakeLists.txt:123 (seqan_build_system_init)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Looking for C++ include execinfo.h
-- Looking for C++ include execinfo.h - found
-- Found Seqan: /build/reproducible-path/seqan2-2.4.0+dfsg/include (found version "2.4.0")
--   Selected repository dir: /build/reproducible-path/seqan2-2.4.0+dfsg
--   Repository date not determined.
--   Repository revision not determined.
-- Configuring tests
CMake Deprecation Warning at tests/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests
CMake Deprecation Warning at tests/align/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/align
-- Could NOT find SDE: Intel(R) Software Development Emulator (sde) (missing: SDE_EXECUTABLE SDE_VERSION_STRING) 
-- Could NOT find Umesimd (missing: UMESIMD_INCLUDE_DIR) 
-- Performing Test SSE4_SOURCE_RUNS
-- Performing Test SSE4_SOURCE_RUNS - Success (Compiled & Host CPU support)
-- Performing Test AVX2_SOURCE_RUNS
-- Performing Test AVX2_SOURCE_RUNS - Success (Compiled & Host CPU support)
-- Performing Test AVX512_KNL_SOURCE_RUNS
-- Performing Test AVX512_KNL_SOURCE_RUNS - Failed
-- => Abort simd detection of newer instruction sets
-- Performing Test SEQAN_SIMD_SEQANSIMD_SUPPORTED
-- Performing Test SEQAN_SIMD_SEQANSIMD_SUPPORTED - Success
-- Performing Test SEQANSIMD_AVX512_KNL_SOURCE_RUNS
-- Performing Test SEQANSIMD_AVX512_KNL_SOURCE_RUNS - Success (Compiled)
CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_simd_global_equal_length_sse4")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align/CMakeLists.txt:120 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_simd_global_equal_length_avx2")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align/CMakeLists.txt:120 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Intel Software Development Emulator not found, not building platform emulated tests.
CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_simd_global_variable_length_sse4")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align/CMakeLists.txt:121 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_simd_global_variable_length_avx2")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align/CMakeLists.txt:121 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Intel Software Development Emulator not found, not building platform emulated tests.
CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_simd_local_equal_length_sse4")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align/CMakeLists.txt:122 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_simd_local_equal_length_avx2")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align/CMakeLists.txt:122 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Intel Software Development Emulator not found, not building platform emulated tests.
CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_simd_local_variable_length_sse4")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align/CMakeLists.txt:123 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_simd_local_variable_length_avx2")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align/CMakeLists.txt:123 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Intel Software Development Emulator not found, not building platform emulated tests.
CMake Deprecation Warning at tests/align_extend/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/align_extend
CMake Deprecation Warning at tests/align_parallel/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/align_parallel
-- Could NOT find SDE: Intel(R) Software Development Emulator (sde) (missing: SDE_EXECUTABLE SDE_VERSION_STRING) 
-- Could NOT find Umesimd (missing: UMESIMD_INCLUDE_DIR) 
CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_parallel_interface_sse4")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align_parallel/CMakeLists.txt:76 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_parallel_interface_avx2")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align_parallel/CMakeLists.txt:76 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Intel Software Development Emulator not found, not building platform emulated tests.
CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_parallel_algorithm_sse4")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align_parallel/CMakeLists.txt:77 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for
  target("test_align_parallel_algorithm_avx2")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/align_parallel/CMakeLists.txt:77 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Intel Software Development Emulator not found, not building platform emulated tests.
CMake Deprecation Warning at tests/align_profile/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/align_profile
CMake Deprecation Warning at tests/align_split/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/align_split
CMake Deprecation Warning at tests/alignment_free/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/alignment_free
CMake Deprecation Warning at tests/arg_parse/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/arg_parse
CMake Deprecation Warning at tests/bam_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/bam_io
CMake Deprecation Warning at tests/basic/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/basic
CMake Deprecation Warning at tests/bed_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/bed_io
CMake Deprecation Warning at tests/blast/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/blast
CMake Deprecation Warning at tests/consensus/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/consensus
CMake Deprecation Warning at tests/consensus_v2/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/consensus_v2
CMake Deprecation Warning at tests/find/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/find
CMake Deprecation Warning at tests/gff_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/gff_io
CMake Deprecation Warning at tests/graph_algorithms/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/graph_algorithms
CMake Deprecation Warning at tests/graph_align/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/graph_align
CMake Deprecation Warning at tests/graph_msa/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/graph_msa
CMake Deprecation Warning at tests/graph_types/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/graph_types
CMake Deprecation Warning at tests/index/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/index
CMake Deprecation Warning at tests/journaled_set/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/journaled_set
CMake Deprecation Warning at tests/journaled_string_tree/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/journaled_string_tree
CMake Deprecation Warning at tests/map/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/map
CMake Deprecation Warning at tests/misc/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/misc
CMake Deprecation Warning at tests/modifier/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/modifier
CMake Deprecation Warning at tests/modifier_cyclic_shape/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/modifier_cyclic_shape
CMake Deprecation Warning at tests/multiple_translation_units/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/multiple_translation_units
CMake Deprecation Warning at tests/parallel/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/parallel
CMake Deprecation Warning at tests/parse_lm/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/parse_lm
CMake Deprecation Warning at tests/pipe/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/pipe
CMake Deprecation Warning at tests/platform/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/platform
CMake Deprecation Warning at tests/random/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/random
CMake Deprecation Warning at tests/realign/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/realign
CMake Deprecation Warning at tests/reduced_aminoacid/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/reduced_aminoacid
CMake Deprecation Warning at tests/rna_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/rna_io
CMake Deprecation Warning at tests/roi_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/roi_io
CMake Deprecation Warning at tests/score/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/score
CMake Deprecation Warning at tests/seeds/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/seeds
CMake Deprecation Warning at tests/seq_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/seq_io
CMake Deprecation Warning at tests/sequence/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/sequence
CMake Deprecation Warning at tests/sequence_journaled/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/sequence_journaled
CMake Deprecation Warning at tests/simd/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/simd
-- Could NOT find SDE: Intel(R) Software Development Emulator (sde) (missing: SDE_EXECUTABLE SDE_VERSION_STRING) 
-- Could NOT find Umesimd (missing: UMESIMD_INCLUDE_DIR) 
CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for target("test_simd_vector_sse4")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/simd/CMakeLists.txt:51 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnSimdUtility.cmake:488 (set_target_properties):
  Policy CMP0160 is not set: More read-only target properties now error when
  trying to set them.  Run "cmake --help-policy CMP0160" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  SOURCE_DIR property is read-only for target("test_simd_vector_avx2")

Call Stack (most recent call first):
  util/cmake/SeqAnSimdUtility.cmake:506 (transfer_target_property)
  util/cmake/SeqAnSimdUtility.cmake:515 (clone_target)
  util/cmake/SeqAnSimdUtility.cmake:640 (add_simd_executables)
  tests/simd/CMakeLists.txt:51 (add_simd_platform_tests)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Intel Software Development Emulator not found, not building platform emulated tests.
CMake Deprecation Warning at tests/simple_intervals_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/simple_intervals_io
CMake Deprecation Warning at tests/statistics/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/statistics
CMake Deprecation Warning at tests/store/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/store
CMake Deprecation Warning at tests/stream/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/stream
CMake Deprecation Warning at tests/swift_local/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/find_swift
CMake Deprecation Warning at tests/tabix_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/tabix_io
CMake Deprecation Warning at tests/translation/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/translation
CMake Deprecation Warning at tests/ucsc_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/test_ucsc_io
CMake Deprecation Warning at tests/vcf_io/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring tests/vcf_io
-- Configuring demos
CMake Deprecation Warning at demos/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found PythonInterp: /usr/bin/python3 (found suitable version "3.11.9", minimum required is "2.7")
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:761 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  util/cmake/SeqAnBuildSystem.cmake:838 (_seqan_setup_demo_test)
  demos/CMakeLists.txt:15 (seqan_register_demos)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring apps
CMake Deprecation Warning at apps/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


CMake Deprecation Warning at apps/alf/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/alf
CMake Deprecation Warning at apps/bs_tools/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/bs_tools
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/bs_tools/CMakeLists.txt:123 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/dfi/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/dfi
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/dfi/CMakeLists.txt:74 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/fiona/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/fiona
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/fiona/CMakeLists.txt:100 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/fx_tools/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/fx_tools
CMake Deprecation Warning at apps/gustaf/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/gustaf
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/gustaf/CMakeLists.txt:97 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/insegt/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/insegt
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/insegt/CMakeLists.txt:88 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/mason2/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/mason2
CMake Deprecation Warning at apps/micro_razers/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/micro_razers
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/micro_razers/CMakeLists.txt:81 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/ngs_roi/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/ngs_roi
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/ngs_roi/CMakeLists.txt:114 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/pair_align/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/pair_align
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/pair_align/CMakeLists.txt:80 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/param_chooser/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/param_chooser
CMake Deprecation Warning at apps/rabema/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/rabema
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/rabema/CMakeLists.txt:110 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/razers/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/razers
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/razers/CMakeLists.txt:100 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/razers3/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/razers3
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/razers3/CMakeLists.txt:127 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/razers3/CMakeLists.txt:128 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/rep_sep/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/rep_sep
CMake Deprecation Warning at apps/sak/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/sak
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/sak/CMakeLists.txt:86 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/sam2matrix/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/sam2matrix
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/sam2matrix/CMakeLists.txt:74 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/samcat/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/samcat
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/samcat/CMakeLists.txt:81 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/searchjoin/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/searchjoin
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/searchjoin/CMakeLists.txt:84 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/seqan_tcoffee/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/seqan_tcoffee
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/seqan_tcoffee/CMakeLists.txt:73 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/seqcons2/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/seqcons2
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/seqcons2/CMakeLists.txt:80 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/sgip/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/sgip
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/sgip/CMakeLists.txt:80 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/snp_store/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/snp_store
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/snp_store/CMakeLists.txt:89 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/splazers/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/splazers
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/splazers/CMakeLists.txt:87 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/stellar/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/stellar
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/stellar/CMakeLists.txt:79 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/tree_recon/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/tree_recon
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/tree_recon/CMakeLists.txt:73 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Deprecation Warning at apps/yara/CMakeLists.txt:9 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring apps/yara
CMake Warning (dev) at util/cmake/SeqAnBuildSystem.cmake:380 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  apps/yara/CMakeLists.txt:188 (seqan_add_app_test)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (15.6s)
-- Generating done (2.8s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    FETCHCONTENT_FULLY_DISCONNECTED


-- Build files have been written to: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
	rm -f debian/seqan-apps.debhelper.log
   debian/rules override_dh_auto_configure-indep
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
dh_auto_configure --indep -B build -- \
	-DSEQAN_BUILD_SYSTEM=SEQAN_RELEASE_LIBRARY -DSEQAN_NO_DOX=1
	cd build && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DSEQAN_BUILD_SYSTEM=SEQAN_RELEASE_LIBRARY -DSEQAN_NO_DOX=1 ..
CMake Warning (dev) at CMakeLists.txt:9 (project):
  cmake_minimum_required() should be called prior to this top-level project()
  call.  Please see the cmake-commands(7) manual for usage documentation of
  both commands.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- The CXX compiler identification is GNU 13.2.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at CMakeLists.txt:16 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Initializing SeqAn Build System...
--   Selected repository dir: /build/reproducible-path/seqan2-2.4.0+dfsg
--   Repository date not determined.
--   Repository revision not determined.
-- Configuring done (0.7s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    FETCHCONTENT_FULLY_DISCONNECTED


-- Build files have been written to: /build/reproducible-path/seqan2-2.4.0+dfsg/build
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
	rm -f debian/libseqan2-dev.debhelper.log
   debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
dh_auto_build --arch --max-parallel=2
	cd obj-x86_64-linux-gnu && make -j2 "INSTALL=install --strip-program=true" VERBOSE=1
make[2]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/seqan2-2.4.0+dfsg -B/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f CMakeFiles/seqan_library.dir/build.make CMakeFiles/seqan_library.dir/depend
make  -f apps/mason2/CMakeFiles/mason_sim.dir/build.make apps/mason2/CMakeFiles/mason_sim.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/CMakeFiles/seqan_library.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_sim.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f CMakeFiles/seqan_library.dir/build.make CMakeFiles/seqan_library.dir/build
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_sim.dir/build.make apps/mason2/CMakeFiles/mason_sim.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[4]: Nothing to be done for 'CMakeFiles/seqan_library.dir/build'.
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  0%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/external_split_merge.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/external_split_merge.cpp.o -MF CMakeFiles/mason_sim.dir/external_split_merge.cpp.o.d -o CMakeFiles/mason_sim.dir/external_split_merge.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/external_split_merge.cpp
[  0%] Built target seqan_library
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/external_split_merge.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/external_split_merge.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/refwrap.h:39,
                 from /usr/include/c++/13/vector:68,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/external_split_merge.h:49:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/external_split_merge.h:53:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  0%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/genomic_variants.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/genomic_variants.cpp.o -MF CMakeFiles/mason_sim.dir/genomic_variants.cpp.o.d -o CMakeFiles/mason_sim.dir/genomic_variants.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/genomic_variants.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/genomic_variants.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/genomic_variants.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/genomic_variants.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_options.h:53,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, GenomicInterval>, StorePointsOnly>, Alloc<> >; TValue = int; TCargo = GenomicInterval]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1502:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2) [with TValue = int; TCargo = GenomicInterval; TValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/genomic_variants.cpp:718:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1441:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1441 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, GenomicInterval>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1453:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1453 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, GenomicInterval>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1475:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1475 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, GenomicInterval>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, GenomicInterval>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  0%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/mason_options.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/mason_options.cpp.o -MF CMakeFiles/mason_sim.dir/mason_options.cpp.o.d -o CMakeFiles/mason_sim.dir/mason_options.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_options.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_options.h:51,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_options.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_options.h:53:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  0%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/methylation_levels.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/methylation_levels.cpp.o -MF CMakeFiles/mason_sim.dir/methylation_levels.cpp.o.d -o CMakeFiles/mason_sim.dir/methylation_levels.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_options.h:53,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  0%] Built target pair_align_global_1111
make  -f apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o -MF CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o.d -o CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lcs.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lcs.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  0%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_454.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_454.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_454.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_454.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_454.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::Lcs_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lcs.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::Lcs_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lcs.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::Lcs_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lcs.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::Lcs_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lcs.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::Lcs_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::Lcs_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lcs.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_454.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/stdexcept:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_base.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_base.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_base.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/stdexcept:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_genome.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_genome.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_genome.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_genome.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_genome.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Built target pair_align_lcs
make  -f apps/pair_align/lib/CMakeFiles/pair_align_local.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_local.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_local.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_local.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_local.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_local.dir/pair_align_local.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_local.dir/pair_align_local.cpp.o -MF CMakeFiles/pair_align_local.dir/pair_align_local.cpp.o.d -o CMakeFiles/pair_align_local.dir/pair_align_local.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_local.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_genome.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_genome.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_genome.h:42:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_local.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_genome.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_genome.cpp:106:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_genome.cpp:106:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_genome.cpp:106:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::SmithWaterman_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_local.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::SmithWaterman_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_local.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::SmithWaterman_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_local.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::SmithWaterman_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_local.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::Tag<seqan::Nothing_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::SmithWaterman_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TAlignSpec = seqan::Tag<seqan::Nothing_>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::SmithWaterman_>; TSpec = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_local.cpp:41:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[  1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_illumina.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_illumina.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/stdexcept:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_illumina.cpp:264:56:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_illumina.cpp:264:56:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:98:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_illumina.cpp:193:25:   required from 'void {anonymous}::_simulateSequence(TRead&, TRng&, const TFrag&, const TCigarString&) [with TFrag = seqan::ModifiedString<seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >, seqan::Tag<seqan::ModReverse_> >; TRead = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TRng = std::mersenne_twister_engine<long unsigned int, 32, 624, 397, 31, 2567483615, 11, 4294967295, 7, 2636928640, 15, 4022730752, 18, 1812433253>; TCigarString = seqan::String<seqan::CigarElement<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_illumina.cpp:264:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:663:20:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::end(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_illumina.cpp:193:25:   required from 'void {anonymous}::_simulateSequence(TRead&, TRng&, const TFrag&, const TCigarString&) [with TFrag = seqan::ModifiedString<seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >, seqan::Tag<seqan::ModReverse_> >; TRead = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TRng = std::mersenne_twister_engine<long unsigned int, 32, 624, 397, 31, 2567483615, 11, 4294967295, 7, 2636928640, 15, 4022730752, 18, 1812433253>; TCigarString = seqan::String<seqan::CigarElement<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_illumina.cpp:264:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_sanger.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_sanger.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/stdexcept:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_sanger.cpp:153:56:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_sanger.cpp:153:56:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:98:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_sanger.cpp:59:25:   required from 'void {anonymous}::_simulateSequence(TRead&, TRng&, const TFrag&, const TCigarString&) [with TFrag = seqan::ModifiedString<seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >, seqan::Tag<seqan::ModReverse_> >; TRead = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TRng = std::mersenne_twister_engine<long unsigned int, 32, 624, 397, 31, 2567483615, 11, 4294967295, 7, 2636928640, 15, 4022730752, 18, 1812433253>; TCigarString = seqan::String<seqan::CigarElement<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_sanger.cpp:153:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:663:20:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::end(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_sanger.cpp:59:25:   required from 'void {anonymous}::_simulateSequence(TRead&, TRng&, const TFrag&, const TCigarString&) [with TFrag = seqan::ModifiedString<seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >, seqan::Tag<seqan::ModReverse_> >; TRead = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TRng = std::mersenne_twister_engine<long unsigned int, 32, 624, 397, 31, 2567483615, 11, 4294967295, 7, 2636928640, 15, 4022730752, 18, 1812433253>; TCigarString = seqan::String<seqan::CigarElement<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_sanger.cpp:153:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o -MF CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o.d -o CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/stdexcept:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.h:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/genomic_variants.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.cpp:167:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.h:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.cpp:167:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'int getSVLen(const seqan::CharString&)' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.cpp:74:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int getSVLen(const seqan::CharString&)':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Built target pair_align_local
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  1%] Linking CXX static library libmason_sim.a
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -P CMakeFiles/mason_sim.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_sim.dir/link.txt --verbose=1
/usr/bin/ar qc libmason_sim.a CMakeFiles/mason_sim.dir/external_split_merge.cpp.o CMakeFiles/mason_sim.dir/genomic_variants.cpp.o CMakeFiles/mason_sim.dir/mason_options.cpp.o CMakeFiles/mason_sim.dir/methylation_levels.cpp.o CMakeFiles/mason_sim.dir/simulate_454.cpp.o CMakeFiles/mason_sim.dir/simulate_base.cpp.o CMakeFiles/mason_sim.dir/simulate_genome.cpp.o CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/usr/bin/ranlib libmason_sim.a
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Built target mason_sim
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Built target pair_align_global_0000
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Built target pair_align_global_0001
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Built target pair_align_global_0010
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Built target pair_align_global_0011
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  1%] Built target pair_align_global_0100
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_0101
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<false, true, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<false, true, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<false, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_0110
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_0111
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[  2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_1000
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_1001
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, false, true, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, false, true, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, false, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_1010
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_1011
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, false, true>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, false, true>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_1100
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:86:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:184:19:   required from 'void pairwise_align(const TScore&, TSeqFile&, TMethod, TDiag, TDiag, bool, TOutfile&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TAlignConfig = seqan::AlignConfig<true, true, true, false>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TSeqFile = std::__cxx11::basic_string<char>; TMethod = seqan::Tag<seqan::NeedlemanWunsch_>; TDiag = int; TOutfile = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:276:42:   required from 'void _initAlignParams(const Options&, TScore&, const TAlgorithm&, TAlignSpec) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:289:31:   required from 'void _initScoreMatrix(const Options&, seqan::Dna5, const TAlgorithm&, const TAlignSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignSpec = seqan::AlignConfig<true, true, true, false>; seqan::Dna5 = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:364:52:   required from 'void pairAlignConfig(const Options&, const TAlgorithm&, const TSpec&) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TSpec = seqan::AlignConfig<true, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_global.cpp:73:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_1101
make  -f apps/param_chooser/CMakeFiles/param_chooser.dir/build.make apps/param_chooser/CMakeFiles/param_chooser.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser/CMakeFiles/param_chooser.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/param_chooser/CMakeFiles/param_chooser.dir/build.make apps/param_chooser/CMakeFiles/param_chooser.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/param_chooser/CMakeFiles/param_chooser.dir/param_chooser.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/param_chooser/CMakeFiles/param_chooser.dir/param_chooser.cpp.o -MF CMakeFiles/param_chooser.dir/param_chooser.cpp.o.d -o CMakeFiles/param_chooser.dir/param_chooser.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:32:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:33,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:30,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:676:44: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  676 |         struct LessRNoGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:704:47: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  704 |         struct LessRNoGEndPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:730:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  730 |         struct LessErrors : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:748:41: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  748 | struct LessSplicedScore : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                         ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:770:45: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  770 | struct LessSplicedScoreGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:32:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h: In instantiation of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<false, true>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1658:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2250:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1430:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1430 |         TGenomeInfixRev         infRev(inf);
      |                                 ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:222:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1653:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2242:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1653:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2245:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1430:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<false, true>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1658:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2250:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1431:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<false, true>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1658:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2250:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1653:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2253:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1653:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2256:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1399:15:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<false, true>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1658:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2250:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1432:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<false, true>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1658:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2250:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1625:31:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2239:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1625:31:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2242:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1625:31:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2245:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:28:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = void; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1414:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<false, true>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1658:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2250:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:469:24:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1432:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<false, true>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1658:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2250:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:21:   required from 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = void; typename Parameter_<T>::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:1437:13:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2076:18:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2250:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:840:14:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2047:11:   required from 'int seqan::mapSingleReads(TMatches&, TGenomeSet&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2150:24:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = int; TSpec = RazerSSpec<false, true>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:2239:19:   required from 'int seqan::mapReads(TMatches&, TGenomeSet&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<int> >; TGenomeSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = int; TCounts = int; TSpec = RazerSSpec<false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:712:13:   required from 'void seqan::makeSelectedStatsFile(TError&, ParamChooserOptions&) [with TError = String<float>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1079:24:   required from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::parseGappedParams(RazerSOptions<TSpec>&, TFile&, ParamChooserOptions&) [with TFile = std::basic_fstream<char>; TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:829:51,
    inlined from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:1107:20,
    inlined from 'int main(int, const char**)' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/param_chooser.cpp:339:21:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main(int, const char**)':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  2%] Linking CXX executable ../../bin/param_chooser
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser && /usr/bin/cmake -E cmake_link_script CMakeFiles/param_chooser.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/param_chooser.dir/param_chooser.cpp.o -o ../../bin/param_chooser  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target param_chooser
make  -f apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/build.make apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/build.make apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o -MF CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o.d -o CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/test_param_chooser.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/test_param_chooser.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/test_param_chooser.cpp:42:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:33,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/test_param_chooser.cpp:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:30,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:676:44: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  676 |         struct LessRNoGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:704:47: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  704 |         struct LessRNoGEndPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:730:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  730 |         struct LessErrors : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:748:41: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  748 | struct LessSplicedScore : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                         ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:770:45: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  770 | struct LessSplicedScoreGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:32:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[  2%] Built target pair_align_global_1110
make  -f apps/rabema/CMakeFiles/rabema_prepare_sam.dir/build.make apps/rabema/CMakeFiles/rabema_prepare_sam.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_prepare_sam.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/rabema/CMakeFiles/rabema_prepare_sam.dir/build.make apps/rabema/CMakeFiles/rabema_prepare_sam.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/rabema/CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.2.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/rabema/CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o -MF CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o.d -o CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/prepare_sam.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/prepare_sam.cpp:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/prepare_sam.cpp:27:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::parseGappedParams(RazerSOptions<TSpec>&, TFile&, ParamChooserOptions&) [with TFile = std::__cxx11::basic_stringstream<char>; TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/param_chooser/../splazers/paramChooser.h:829:51:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::parseGappedParams(RazerSOptions<TSpec>&, TFile&, ParamChooserOptions&) [with TFile = std::__cxx11::basic_stringstream<char>; TSpec = RazerSSpec<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  2%] Linking CXX executable ../../bin/test_funcs_param_chooser
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_funcs_param_chooser.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o -o ../../bin/test_funcs_param_chooser  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target test_funcs_param_chooser
make  -f apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build.make apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build.make apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Building CXX object apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.2.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o -MF CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o.d -o CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:31:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:105:10: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  105 |     std::binary_function<WeightedMatch, WeightedMatch, bool>
      |          ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<WeightedMatch>; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<WeightedMatch>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:254:100:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<WeightedMatch>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>; TIterator = WeightedMatch*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<WeightedMatch>, InfixSegment>; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:257:52:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<WeightedMatch>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<WeightedMatch>, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<WeightedMatch>, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:469:24:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<WeightedMatch>, InfixSegment>; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:257:52:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<WeightedMatch>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>; TIterator = WeightedMatch*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<WeightedMatch>, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<WeightedMatch>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<WeightedMatch>, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:513:97:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<WeightedMatch>, InfixSegment>; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:257:91:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<WeightedMatch>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>; TIterator = WeightedMatch*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h: In instantiation of 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Myers<seqan::FindInfix> >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Myers<FindInfix> >; TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   required from 'void seqan::_patternFirstInit(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, TNeedle2&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:660:22:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/find_myers_ukkonen_reads.h:94:9:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::MyersUkkonenReads_> >::Pattern(TNeedle2&, int) [with TNeedle2 = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:403:41:   required from 'void buildErrorCurvePoints(seqan::String<WeightedMatch>&, int&, TContigSeq&, size_t, bool, TReadSeq&, size_t, size_t, const TReadNames&, bool, const TPatternSpec&) [with TContigSeq = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TReadSeq = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; TReadNames = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >; size_t = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:899:34:   required from 'int matchesToErrorFunction(TErrorCurves&, seqan::String<int>&, seqan::BamFileIn&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, const seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, const seqan::FaiIndex&, const BuildGoldStandardOptions&, const TPatternSpec&) [with TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; TErrorCurves = std::map<int, seqan::String<WeightedMatch> >; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:1203:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  625 |     return ModifiedString<THost, ModReverse>(host);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:254:13:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/find_myers_ukkonen_reads.h:94:9:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::MyersUkkonenReads_> >::Pattern(TNeedle2&, int) [with TNeedle2 = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:403:41:   required from 'void buildErrorCurvePoints(seqan::String<WeightedMatch>&, int&, TContigSeq&, size_t, bool, TReadSeq&, size_t, size_t, const TReadNames&, bool, const TPatternSpec&) [with TContigSeq = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TReadSeq = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; TReadNames = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >; size_t = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:899:34:   required from 'int matchesToErrorFunction(TErrorCurves&, seqan::String<int>&, seqan::BamFileIn&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, const seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, const seqan::FaiIndex&, const BuildGoldStandardOptions&, const TPatternSpec&) [with TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; TErrorCurves = std::map<int, seqan::String<WeightedMatch> >; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:1203:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12:   required from 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Myers<seqan::FindInfix> >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Myers<FindInfix> >; TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/find_myers_ukkonen_reads.h:94:9:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::MyersUkkonenReads_> >::Pattern(TNeedle2&, int) [with TNeedle2 = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:403:41:   required from 'void buildErrorCurvePoints(seqan::String<WeightedMatch>&, int&, TContigSeq&, size_t, bool, TReadSeq&, size_t, size_t, const TReadNames&, bool, const TPatternSpec&) [with TContigSeq = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TReadSeq = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; TReadNames = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >; size_t = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:899:34:   required from 'int matchesToErrorFunction(TErrorCurves&, seqan::String<int>&, seqan::BamFileIn&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, const seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, const seqan::FaiIndex&, const BuildGoldStandardOptions&, const TPatternSpec&) [with TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; TErrorCurves = std::map<int, seqan::String<WeightedMatch> >; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_build_gold_standard.cpp:1203:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  3%] Linking CXX executable ../../bin/rabema_prepare_sam
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema && /usr/bin/cmake -E cmake_link_script CMakeFiles/rabema_prepare_sam.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o -o ../../bin/rabema_prepare_sam  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target rabema_prepare_sam
make  -f apps/rabema/CMakeFiles/rabema_evaluate.dir/build.make apps/rabema/CMakeFiles/rabema_evaluate.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_evaluate.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/rabema/CMakeFiles/rabema_evaluate.dir/build.make apps/rabema/CMakeFiles/rabema_evaluate.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/rabema/CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.2.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/rabema/CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o -MF CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o.d -o CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:28:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:33:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<unsigned int, unsigned int>, StorePointsOnly>, Alloc<> >; TValue = unsigned int; TCargo = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1502:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2) [with TValue = unsigned int; TCargo = unsigned int; TValue2 = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:644:22:   required from 'int benchmarkReadResult(RabemaStats&, const seqan::String<seqan::BamAlignmentRecord>&, const seqan::BamFileIn&, const seqan::String<GsiRecord>&, const seqan::FaiIndex&, const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&, const RefIdMapping&, const RabemaEvaluationOptions&, const TPatternSpec&, bool, bool) [with TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:1003:42:   required from 'int compareAlignedReadsToReference(RabemaStats&, seqan::BamFileIn&, const seqan::FaiIndex&, const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&, TForwardIter&, const RabemaEvaluationOptions&, const TPatternSpec&) [with TForwardIter = seqan::Iter<seqan::VirtualStream<char, seqan::Tag<seqan::Input_> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > >; TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:1401:45:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1441:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1441 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<unsigned int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1453:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1453 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<unsigned int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1475:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1475 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<unsigned int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h: In instantiation of 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Myers<seqan::FindInfix> >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Myers<FindInfix> >; TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   required from 'void seqan::_patternFirstInit(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, TNeedle2&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:660:22:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/find_myers_ukkonen_reads.h:94:9:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::MyersUkkonenReads_> >::Pattern(TNeedle2&, int) [with TNeedle2 = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:623:51:   required from 'int benchmarkReadResult(RabemaStats&, const seqan::String<seqan::BamAlignmentRecord>&, const seqan::BamFileIn&, const seqan::String<GsiRecord>&, const seqan::FaiIndex&, const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&, const RefIdMapping&, const RabemaEvaluationOptions&, const TPatternSpec&, bool, bool) [with TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:1003:42:   required from 'int compareAlignedReadsToReference(RabemaStats&, seqan::BamFileIn&, const seqan::FaiIndex&, const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&, TForwardIter&, const RabemaEvaluationOptions&, const TPatternSpec&) [with TForwardIter = seqan::Iter<seqan::VirtualStream<char, seqan::Tag<seqan::Input_> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > >; TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:1401:45:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  625 |     return ModifiedString<THost, ModReverse>(host);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:254:13:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/find_myers_ukkonen_reads.h:94:9:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::MyersUkkonenReads_> >::Pattern(TNeedle2&, int) [with TNeedle2 = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:623:51:   required from 'int benchmarkReadResult(RabemaStats&, const seqan::String<seqan::BamAlignmentRecord>&, const seqan::BamFileIn&, const seqan::String<GsiRecord>&, const seqan::FaiIndex&, const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&, const RefIdMapping&, const RabemaEvaluationOptions&, const TPatternSpec&, bool, bool) [with TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:1003:42:   required from 'int compareAlignedReadsToReference(RabemaStats&, seqan::BamFileIn&, const seqan::FaiIndex&, const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&, TForwardIter&, const RabemaEvaluationOptions&, const TPatternSpec&) [with TForwardIter = seqan::Iter<seqan::VirtualStream<char, seqan::Tag<seqan::Input_> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > >; TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:1401:45:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12:   required from 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Myers<seqan::FindInfix> >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Myers<FindInfix> >; TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/find_myers_ukkonen_reads.h:94:9:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::MyersUkkonenReads_> >::Pattern(TNeedle2&, int) [with TNeedle2 = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:623:51:   required from 'int benchmarkReadResult(RabemaStats&, const seqan::String<seqan::BamAlignmentRecord>&, const seqan::BamFileIn&, const seqan::String<GsiRecord>&, const seqan::FaiIndex&, const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&, const RefIdMapping&, const RabemaEvaluationOptions&, const TPatternSpec&, bool, bool) [with TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:1003:42:   required from 'int compareAlignedReadsToReference(RabemaStats&, seqan::BamFileIn&, const seqan::FaiIndex&, const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&, TForwardIter&, const RabemaEvaluationOptions&, const TPatternSpec&) [with TForwardIter = seqan::Iter<seqan::VirtualStream<char, seqan::Tag<seqan::Input_> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > >; TPatternSpec = seqan::Tag<seqan::MyersUkkonenReads_>; seqan::BamFileIn = seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/rabema_evaluate.cpp:1401:45:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  3%] Linking CXX executable ../../bin/rabema_build_gold_standard
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema && /usr/bin/cmake -E cmake_link_script CMakeFiles/rabema_build_gold_standard.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o -o ../../bin/rabema_build_gold_standard  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target rabema_build_gold_standard
make  -f apps/rabema/CMakeFiles/rabema_do_search.dir/build.make apps/rabema/CMakeFiles/rabema_do_search.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_do_search.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/rabema/CMakeFiles/rabema_do_search.dir/build.make apps/rabema/CMakeFiles/rabema_do_search.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/rabema/CMakeFiles/rabema_do_search.dir/do_search.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.2.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/rabema/CMakeFiles/rabema_do_search.dir/do_search.cpp.o -MF CMakeFiles/rabema_do_search.dir/do_search.cpp.o.d -o CMakeFiles/rabema_do_search.dir/do_search.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/do_search.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/do_search.cpp:8:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/do_search.cpp:3:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/do_search.cpp:11:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/do_search.cpp:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:105:10: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  105 |     std::binary_function<WeightedMatch, WeightedMatch, bool>
      |          ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<WeightedMatch>; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<WeightedMatch>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:254:100:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<WeightedMatch>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/do_search.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>; TIterator = WeightedMatch*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<WeightedMatch>, InfixSegment>; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:257:52:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<WeightedMatch>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<WeightedMatch>, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<WeightedMatch>, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:469:24:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<WeightedMatch>, InfixSegment>; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:257:52:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<WeightedMatch>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>; TIterator = WeightedMatch*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<WeightedMatch>, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<WeightedMatch>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<WeightedMatch>, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:513:97:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<WeightedMatch>, InfixSegment>; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<WeightedMatch>, InfixSegment>, AdaptorIterator<WeightedMatch*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/curve_smoothing.h:257:91:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<WeightedMatch>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>; TIterator = WeightedMatch*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<WeightedMatch>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h: In instantiation of 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Myers<seqan::FindInfix> >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Myers<FindInfix> >; TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   required from 'void seqan::_patternFirstInit(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, TNeedle2&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:660:22:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/find_myers_ukkonen_reads.h:94:9:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::MyersUkkonenReads_> >::Pattern(TNeedle2&, int) [with TNeedle2 = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/do_search.cpp:27:89:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  625 |     return ModifiedString<THost, ModReverse>(host);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:840:14:   required from 'void seqan::setValue(Holder<TValue, Tag<Tristate_> >&, const TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:254:13:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/find_myers_ukkonen_reads.h:94:9:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::MyersUkkonenReads_> >::Pattern(TNeedle2&, int) [with TNeedle2 = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/do_search.cpp:27:89:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12:   required from 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Myers<seqan::FindInfix> >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Myers<FindInfix> >; TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   required from 'void seqan::_patternFirstInit(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, TNeedle2&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:660:22:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/find_myers_ukkonen_reads.h:94:9:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::MyersUkkonenReads_> >::Pattern(TNeedle2&, int) [with TNeedle2 = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/do_search.cpp:27:89:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  3%] Linking CXX executable ../../bin/rabema_do_search
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema && /usr/bin/cmake -E cmake_link_script CMakeFiles/rabema_do_search.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/rabema_do_search.dir/do_search.cpp.o -o ../../bin/rabema_do_search  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target rabema_do_search
make  -f apps/razers/CMakeFiles/razers.dir/build.make apps/razers/CMakeFiles/razers.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers/CMakeFiles/razers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/razers/CMakeFiles/razers.dir/build.make apps/razers/CMakeFiles/razers.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/razers/CMakeFiles/razers.dir/razers.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.5.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/razers/CMakeFiles/razers.dir/razers.cpp.o -MF CMakeFiles/razers.dir/razers.cpp.o.d -o CMakeFiles/razers.dir/razers.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:28,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:696:44: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  696 |         struct LessRNoGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:728:47: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  728 |         struct LessRNoGEndPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:760:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  760 |         struct LessErrors : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:51:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/outputFormat.h:126:44: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  126 |         struct LessGPosRNo : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:221:47: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  221 |         struct LessPairErrors : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:622:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:622:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:622:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h: In instantiation of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:492:40:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1471:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1471 |         TGenomeInfixRev         infRev(inf);
      |                                 ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h: In instantiation of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1471:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1471 |         TGenomeInfixRev         infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:622:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna5Q_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = VirtualStream<char, Tag<Output_> >; THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/outputFormat.h:722:12:   required from 'void seqan::dumpMatches(TMatches&, const TGenomeNames&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReads&, TCounts&, const TReadNames&, CharString, CharString, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenomeNames = StringSet<String<char, Alloc<> > >; TReads = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadNames = StringSet<String<char, Alloc<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:232:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:622:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:395:32:   required from 'seqan::Finder<THaystack, seqan::Swift<TSpec> >::Finder(THaystack&, TRepeatSize, TPeriodSize) [with TRepeatSize = int; TPeriodSize = int; THaystack = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:394:16:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1928:77:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:222:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2268:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1699:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2268:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2271:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1699:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2271:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1928:77:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1471:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:492:40:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1472:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:492:40:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2279:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1699:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2279:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2282:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1699:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2282:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1866:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1876:41:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1845:48:   required from 'bool seqan::_nextNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1965:37:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1866:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1473:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:492:40:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna5Q_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = VirtualStream<char, Tag<Output_> >; THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/outputFormat.h:722:12:   required from 'void seqan::dumpMatches(TMatches&, const TGenomeNames&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReads&, TCounts&, const TReadNames&, CharString, CharString, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenomeNames = StringSet<String<char, Alloc<> > >; TReads = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadNames = StringSet<String<char, Alloc<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:232:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:375:32:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1666:31:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:375:32:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2268:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1666:31:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2268:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:375:32:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2271:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1666:31:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2271:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = void; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = FindInfix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1455:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:492:40:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:469:24:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1473:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:492:40:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1845:33:   required from 'bool seqan::_nextNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1965:37:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:428:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:21:   required from 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = void; typename Parameter_<T>::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1478:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:492:40:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:254:13:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix, True, void>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:1971:11:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_wotd.h:259:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:394:16:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers_matepairs.h:777:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2203:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:209:25:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/razers.cpp:697:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  3%] Linking CXX executable ../../bin/rabema_evaluate
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema && /usr/bin/cmake -E cmake_link_script CMakeFiles/rabema_evaluate.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o -o ../../bin/rabema_evaluate  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target rabema_evaluate
make  -f apps/razers3/CMakeFiles/razers3.dir/build.make apps/razers3/CMakeFiles/razers3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/razers3/CMakeFiles/razers3.dir/build.make apps/razers3/CMakeFiles/razers3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/razers3/CMakeFiles/razers3.dir/razers.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"3.5.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/razers3/CMakeFiles/razers3.dir/razers.cpp.o -MF CMakeFiles/razers3.dir/razers.cpp.o.d -o CMakeFiles/razers3.dir/razers.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:57:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:63:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:34,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:845:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  845 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:862:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  862 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:896:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  896 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:934:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  934 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:968:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  968 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1009:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1009 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1046:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1046 |     public std::binary_function<TReadMatch, TReadMatch, int>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1087:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1087 |     public std::binary_function<typename Value<TAlignedReadStore>::Type, typename Value<TAlignedReadStore>::Type, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1130:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1130 |     public std::binary_function<typename Value<TAlignedReadStore>::Type, typename Value<TAlignedReadStore>::Type, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1174:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1174 |     public std::binary_function<typename Value<TAlignedReadStore>::Type, typename Value<TAlignedReadStore>::Type, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1218:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1218 |     public std::binary_function<typename Value<TAlignedReadStore>::Type, typename Value<TAlignedReadStore>::Type, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:127:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  127 |     public std::binary_function<typename Value<TAlignedReadStore>::Type, typename Value<TAlignedReadStore>::Type, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:83:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:265:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  265 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:321:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  321 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:366:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  366 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:785:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSScore, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1304:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSQuality<>, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1307:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSPrefix, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSPrefix; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1348:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSPrefix, RazerSGapped, RazerSScore, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1304:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSPrefix; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1348:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSPrefix, RazerSGapped, RazerSQuality<>, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1307:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSPrefix; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1348:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1351:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSScore, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1304:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1351:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSQuality<>, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1307:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1351:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSUngapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1356:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSUngapped, RazerSScore, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1304:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1356:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSUngapped, RazerSQuality<>, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1307:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1356:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSPrefix, RazerSUngapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSPrefix; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1359:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSPrefix, RazerSUngapped, RazerSScore, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1304:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSPrefix; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1359:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSPrefix, RazerSUngapped, RazerSQuality<>, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1307:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSPrefix; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1359:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1362:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSScore, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1304:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1362:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h: In instantiation of 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSQuality<>, NMatchesNone_>; CharString = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1307:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1362:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:87:30: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
   87 |   #define SEQAN_DO_PRAGMA(x) _Pragma(# x)
      |                              ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_macros.h:88:31: note: in expansion of macro 'SEQAN_DO_PRAGMA'
   88 |   #define SEQAN_OMP_PRAGMA(x) SEQAN_DO_PRAGMA(omp x)
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:672:13: note: in expansion of macro 'SEQAN_OMP_PRAGMA'
  672 |             SEQAN_OMP_PRAGMA(parallel for private (intBuf) firstprivate(align))
      |             ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:785:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:785:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:785:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::QualityExtractor<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:745:69:   required from 'void seqan::write(TTarget&, FragmentStore<TSpec, TConfig>&, Amos) [with TTarget = VirtualStream<char, Tag<Output_> >; TSpec = MyFragStoreConfig; TConfig = FragmentStoreConfig<MyFragStoreConfig>; Amos = const Tag<TagAmos_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1222:14:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:785:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:85:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesPaired(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1463:40:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1662:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:358:19: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  358 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:399:22: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  399 |         indexL.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:413:22: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  413 |         indexR.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:33:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1202:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:835:19: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  835 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:862:21: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  862 |         index.shape = shape;
      |         ~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesPaired(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1463:40:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1657:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:358:19: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  358 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:399:22: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  399 |         indexL.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:413:22: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  413 |         indexR.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:835:19: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  835 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:862:21: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  862 |         index.shape = shape;
      |         ~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesPaired(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1463:40:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1662:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:358:19: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  358 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:399:22: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  399 |         indexL.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:413:22: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  413 |         indexR.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1202:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:835:19: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  835 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:862:21: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  862 |         index.shape = shape;
      |         ~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesPaired(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1463:40:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1657:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:358:19: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  358 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:399:22: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  399 |         indexL.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:413:22: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  413 |         indexR.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:835:19: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  835 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:862:21: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  862 |         index.shape = shape;
      |         ~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesPaired(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1463:40:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1662:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:358:19: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  358 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:399:22: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  399 |         indexL.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:413:22: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  413 |         indexR.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1202:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:835:19: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  835 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:862:21: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  862 |         index.shape = shape;
      |         ~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesPaired(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1463:40:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1657:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:358:19: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  358 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:399:22: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  399 |         indexL.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:413:22: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  413 |         indexR.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:835:19: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  835 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:862:21: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  862 |         index.shape = shape;
      |         ~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesPaired(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1463:40:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1662:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:358:19: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  358 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:399:22: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  399 |         indexL.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:413:22: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  413 |         indexR.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1202:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:835:19: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  835 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:862:21: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  862 |         index.shape = shape;
      |         ~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesPaired(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1463:40:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1657:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:358:19: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  358 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:399:22: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  399 |         indexL.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:413:22: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  413 |         indexR.shape = shape;
      |         ~~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:835:19: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  835 |         tls.shape = shape;
      |         ~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:862:21: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  862 |         index.shape = shape;
      |         ~~~~~~~~~~~~^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:80:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = MyFragStoreConfig; TConfig = FragmentStoreConfig<MyFragStoreConfig>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/tokenization.h:489:23:   required from 'void seqan::writeWrappedString(TTarget&, const TSequence&, TSize) [with TTarget = Iter<VirtualStream<char, Tag<Output_> >, StreamIterator<Tag<Output_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:740:27:   required from 'void seqan::write(TTarget&, FragmentStore<TSpec, TConfig>&, Amos) [with TTarget = VirtualStream<char, Tag<Output_> >; TSpec = MyFragStoreConfig; TConfig = FragmentStoreConfig<MyFragStoreConfig>; Amos = const Tag<TagAmos_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1222:14:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:98:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::begin(const ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = ModView<QualityExtractor<SimpleType<unsigned char, Dna5Q_> > >; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<QualityExtractor<SimpleType<unsigned char, Dna5Q_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/tokenization.h:489:23:   required from 'void seqan::writeWrappedString(TTarget&, const TSequence&, TSize) [with TTarget = Iter<VirtualStream<char, Tag<Output_> >, StreamIterator<Tag<Output_> > >; TSequence = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<QualityExtractor<SimpleType<unsigned char, Dna5Q_> > > >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:746:27:   required from 'void seqan::write(TTarget&, FragmentStore<TSpec, TConfig>&, Amos) [with TTarget = VirtualStream<char, Tag<Output_> >; TSpec = MyFragStoreConfig; TConfig = FragmentStoreConfig<MyFragStoreConfig>; Amos = const Tag<TagAmos_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1222:14:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:793:40:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3247:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:223:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2785:21:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Pigeonhole<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TPigeonholeSpec = void; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1088:24:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3252:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:793:40:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFilterSpec = Pigeonhole<void>; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3252:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:222:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2896:17:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Swift<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1088:24:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3247:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:793:40:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3247:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = Hamming_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2785:21:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Pigeonhole<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TPigeonholeSpec = Hamming_; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1088:24:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3252:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2896:17:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Swift<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1088:24:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3247:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesNone_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:793:40:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3247:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesNone_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:793:40:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFilterSpec = Pigeonhole<void>; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3252:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesNone_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:793:40:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3247:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:32:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<void>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:969:48:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:696:16:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFilterSpec = Pigeonhole<void>; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3252:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2979:24:   required from 'void seqan::_mapSingleReadsToContig(TMatches&, TFragmentStore&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3054:36:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3216:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2785:21:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Pigeonhole<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TPigeonholeSpec = void; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3026:24:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3221:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2979:24:   required from 'void seqan::_mapSingleReadsToContig(TMatches&, TFragmentStore&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFilterSpec = Pigeonhole<void>; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3054:36:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3221:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:2081:73:   required from 'bool seqan::windowFindBegin(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1200:29:   required from 'void seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, unsigned int, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1489:38:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1657:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:296:20:   required from 'void seqan::workVerification(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, Job<SingleVerification<TMatches, TFragmentStore, THitString, TOptions, TFilterPattern> >&, const String<unsigned int, Alloc<> >&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>; THitString = String<SwiftHitSemiGlobal_<long int>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:751:33:   required from 'void seqan::_mapSingleReadsParallelToContig(FragmentStore<TSpec, TConfig>&, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, const TContigId&, TCounts&, char, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TContigId = unsigned int; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1033:44:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2785:21:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Pigeonhole<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TPigeonholeSpec = void; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:872:28:   required from 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1202:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:296:20:   required from 'void seqan::workVerification(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, Job<SingleVerification<TMatches, TFragmentStore, THitString, TOptions, TFilterPattern> >&, const String<unsigned int, Alloc<> >&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>; THitString = String<SwiftHitSemiGlobal_<long int>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:751:33:   required from 'void seqan::_mapSingleReadsParallelToContig(FragmentStore<TSpec, TConfig>&, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, const TContigId&, TCounts&, char, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TContigId = unsigned int; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1033:44:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1202:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2896:17:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Swift<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3026:24:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3216:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2979:24:   required from 'void seqan::_mapSingleReadsToContig(TMatches&, TFragmentStore&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3054:36:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3216:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2896:17:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Swift<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:872:28:   required from 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:296:20:   required from 'void seqan::workVerification(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, Job<SingleVerification<TMatches, TFragmentStore, THitString, TOptions, TFilterPattern> >&, const String<unsigned int, Alloc<> >&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>; THitString = String<SwiftHitSemiGlobal_<long int>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:751:33:   required from 'void seqan::_mapSingleReadsParallelToContig(FragmentStore<TSpec, TConfig>&, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, const TContigId&, TCounts&, char, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TContigId = unsigned int; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1033:44:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<Hamming_>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:969:48:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:696:16:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFilterSpec = Pigeonhole<Hamming_>; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3252:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = Hamming_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2785:21:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Pigeonhole<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TPigeonholeSpec = Hamming_; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3026:24:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3221:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:2081:73:   required from 'bool seqan::windowFindBegin(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1200:29:   required from 'void seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, unsigned int, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1489:38:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1657:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = Hamming_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2785:21:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Pigeonhole<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TPigeonholeSpec = Hamming_; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:872:28:   required from 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1202:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2896:17:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Swift<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3026:24:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3216:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2896:17:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Swift<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:872:28:   required from 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>, Pattern<Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesNone_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2979:24:   required from 'void seqan::_mapSingleReadsToContig(TMatches&, TFragmentStore&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3054:36:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3216:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>, Pattern<Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesNone_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2979:24:   required from 'void seqan::_mapSingleReadsToContig(TMatches&, TFragmentStore&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFilterSpec = Pigeonhole<void>; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3054:36:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesNone_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3221:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesNone_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:296:20:   required from 'void seqan::workVerification(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, Job<SingleVerification<TMatches, TFragmentStore, THitString, TOptions, TFilterPattern> >&, const String<unsigned int, Alloc<> >&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>; THitString = String<SwiftHitSemiGlobal_<long int>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:751:33:   required from 'void seqan::_mapSingleReadsParallelToContig(FragmentStore<TSpec, TConfig>&, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, const TContigId&, TCounts&, char, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TContigId = unsigned int; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1033:44:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesNone_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:296:20:   required from 'void seqan::workVerification(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, Job<SingleVerification<TMatches, TFragmentStore, THitString, TOptions, TFilterPattern> >&, const String<unsigned int, Alloc<> >&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>; THitString = String<SwiftHitSemiGlobal_<long int>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:751:33:   required from 'void seqan::_mapSingleReadsParallelToContig(FragmentStore<TSpec, TConfig>&, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, const TContigId&, TCounts&, char, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TContigId = unsigned int; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1033:44:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1202:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>, Pattern<Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesNone_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2979:24:   required from 'void seqan::_mapSingleReadsToContig(TMatches&, TFragmentStore&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3054:36:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TReadIndex&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3146:27:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3216:31:   required from 'int seqan::_mapSingleReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h: In instantiation of 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesNone_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:296:20:   required from 'void seqan::workVerification(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, Job<SingleVerification<TMatches, TFragmentStore, THitString, TOptions, TFilterPattern> >&, const String<unsigned int, Alloc<> >&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>; THitString = String<SwiftHitSemiGlobal_<long int>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:751:33:   required from 'void seqan::_mapSingleReadsParallelToContig(FragmentStore<TSpec, TConfig>&, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, const TContigId&, TCounts&, char, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Alloc<> >; TContigId = unsigned int; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1033:44:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1197:39:   required from 'int seqan::_mapSingleReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2155:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2155 |     TGenomeInfix origInf(inf);
      |                  ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2238:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2238 |                     TReadRev            readRev(readPrefix);
      |                                         ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2239:41: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2239 |                     TGenomeInfixRev     infRev(inf);
      |                                         ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2341:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2341 |             TReadRev            readRev(readPrefix);
      |                                 ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2342:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 2342 |             TGenomeInfixRev     infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:513:15:   required from 'void seqan::insertGap(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >; TPosition = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2067:42:   required from 'void seqan::convertMatchesToGlobalAlignment(FragmentStore<TSpec, TConfig>&, const TScore&, const TShrinkMatches&) [with TSpec = MyFragStoreConfig; TConfig = FragmentStoreConfig<MyFragStoreConfig>; TScore = Score<int, Tag<Simple_> >; TShrinkMatches = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1221:40:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:395:32:   required from 'seqan::Finder<THaystack, seqan::Swift<TSpec> >::Finder(THaystack&, TRepeatSize, TPeriodSize) [with TRepeatSize = int; TPeriodSize = int; THaystack = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:680:20:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3247:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<void>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:932:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:696:16:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFilterSpec = Pigeonhole<void>; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3252:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:941:46:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:696:16:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFilterSpec = Pigeonhole<void>; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3252:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1866:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:2088:30:   required from 'bool seqan::windowFindBegin(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1200:29:   required from 'void seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, unsigned int, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1489:38:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1657:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<Hamming_>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:932:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:696:16:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFilterSpec = Pigeonhole<Hamming_>; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Pigeonhole<Hamming_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3252:33:   required from 'int seqan::_mapMatePairReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1866:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:2088:30:   required from 'bool seqan::windowFindBegin(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1200:29:   required from 'void seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, unsigned int, TThreadLocalStorages&, const String<unsigned int, Alloc<> >&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1489:38:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&, TFilterSpec) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1657:41:   required from 'int seqan::_mapMatePairReadsParallel(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const RazerSMode<TAlignMode, TGapMode, TScoreMode, TMatchNPolicy>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TScoreMode = RazerSErrors; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<int> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:24:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:507:35:   required from 'void seqan::_alignAndGetCigarString(TCigar&, TMDString&, const TContigInfix&, const TReadSeq&, TAlignedRead&, TErrors&, TAlignFunctor&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContigInfix = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int; TAlignFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:529:32:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, TAlignFunctor&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int; TAlignFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = MyFragStoreConfig; TConfig = FragmentStoreConfig<MyFragStoreConfig>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<int> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:507:35:   required from 'void seqan::_alignAndGetCigarString(TCigar&, TMDString&, const TContigInfix&, const TReadSeq&, TAlignedRead&, TErrors&, TAlignFunctor&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContigInfix = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int; TAlignFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:529:32:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, TAlignFunctor&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int; TAlignFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = MyFragStoreConfig; TConfig = FragmentStoreConfig<MyFragStoreConfig>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<int> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:507:35:   required from 'void seqan::_alignAndGetCigarString(TCigar&, TMDString&, const TContigInfix&, const TReadSeq&, TAlignedRead&, TErrors&, TAlignFunctor&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContigInfix = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TReadSeq = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int; TAlignFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:534:32:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, TAlignFunctor&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int; TAlignFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = MyFragStoreConfig; TConfig = FragmentStoreConfig<MyFragStoreConfig>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:663:20:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::end(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:811:66:   required from 'void seqan::_fillBamSeqAndQual(TSeq&, TQual&, const TRead&) [with TSeq = String<SimpleType<unsigned char, Iupac_>, Alloc<> >; TQual = String<char, Alloc<> >; TRead = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:31:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = MyFragStoreConfig; TConfig = FragmentStoreConfig<MyFragStoreConfig>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:398:24:   required from 'void seqan::initializeThreadLocalStoragesPaired(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1463:40:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:859:24:   required from 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<int> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:24:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:507:35:   required from 'void seqan::_alignAndGetCigarString(TCigar&, TMDString&, const TContigInfix&, const TReadSeq&, TAlignedRead&, TErrors&, TAlignFunctor&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContigInfix = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int; TAlignFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:529:32:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<int> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:507:35:   required from 'void seqan::_alignAndGetCigarString(TCigar&, TMDString&, const TContigInfix&, const TReadSeq&, TAlignedRead&, TErrors&, TAlignFunctor&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContigInfix = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int; TAlignFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:529:32:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<int> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:507:35:   required from 'void seqan::_alignAndGetCigarString(TCigar&, TMDString&, const TContigInfix&, const TReadSeq&, TAlignedRead&, TErrors&, TAlignFunctor&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContigInfix = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TReadSeq = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int; TAlignFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:534:32:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<int> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:654:36:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:469:24:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2241:41:   required from 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:793:40:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Pigeonhole<void>; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2795:64:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Pigeonhole<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TPigeonholeSpec = void; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1088:24:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:852:30:   required from 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Pigeonhole<void>; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:852:30:   required from 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:654:36:   required from 'void seqan::_mapMatePairReads(TMatches&, FragmentStore<TSpec, TConfig>&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TReadIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:1115:30:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:852:30:   required from 'void seqan::initializeThreadLocalStoragesSingle(TThreadLocalStorages&, TFragmentStore&, const TSplitters&, TShape&, TOptions&) [with TThreadLocalStorages = String<ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TSplitters = String<unsigned int, Alloc<> >; TShape = const Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:1008:40:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = void; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:989:66:   required from 'bool seqan::_patternInitSmallStateBanded(TFinder&, const TNeedle2&, PatternState_<TNeedle, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, void>; TNeedle = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; TFinderCSP = NMatchesAll_; TPatternCSP = NMatchesAll_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1181:44:   required from 'bool seqan::_stateInit(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TNeedle2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; TFinderCSP = NMatchesAll_; TPatternCSP = NMatchesAll_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1535:24:   required from 'bool seqan::find(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TNeedle2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; TFinderCSP = NMatchesAll_; TPatternCSP = NMatchesAll_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1646:16:   required from 'bool seqan::find(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TNeedle2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AlignTextBanded<FindInfix, NMatchesAll_, NMatchesAll_>; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2177:16:   required from 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:793:40:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_interface.h:430:24:   required from 'void seqan::goEnd(TIterator&) [with TIterator = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:737:10:   required from 'void seqan::goEnd(Finder<THaystack, TSpec>&) [with THaystack = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1537:18:   required from 'bool seqan::find(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TNeedle2 = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFinderCSP = NMatchesAll_; TPatternCSP = NMatchesAll_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1646:16:   required from 'bool seqan::find(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TNeedle2 = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = AlignTextBanded<FindPrefix, NMatchesAll_, NMatchesAll_>; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2245:32:   required from 'bool seqan::matchVerify(TMatchVerifier&, Segment<TSpec>, unsigned int, const TRead&, const RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, TMatchNPolicy>&) [with TMatchVerifier = MatchVerifier<FragmentStore<MyFragStoreConfig>, String<MatchRecord<long unsigned int>, Alloc<> >, RazerSCoreOptions<RazerSSpec<> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, String<String<short unsigned int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TRead = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs.h:793:40:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3340:37:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2948:40:   required from 'void seqan::_mapSingleReadsToContig(TMatches&, TFragmentStore&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3054:36:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Pigeonhole<void>; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2795:64:   required from 'void seqan::_applyFilterOptions(Pattern<TIndex, Pigeonhole<TSpec> >&, const TOptions&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TPigeonholeSpec = void; TOptions = RazerSCoreOptions<RazerSSpec<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3026:24:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:398:24:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:398:24:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   required from 'bool seqan::processRead(PairedMatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:962:32:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >&, String<TString*>&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinderL = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >; TFilterFinderR = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >; TFilterPattern = Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1314:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:318:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  318 |     class Pattern<TIndex, Pigeonhole<TSpec> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: note: synthesized method 'seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >& seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >::operator=(const seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >&)' first required here
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >& seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:859:24:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:859:24:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_match_filter.h:251:20:   required from 'bool seqan::processRead(MatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:466:36:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, String<SingleVerificationResult<TMatches> >&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:769:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:318:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  318 |     class Pattern<TIndex, Pigeonhole<TSpec> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: note: synthesized method 'seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >& seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >::operator=(const seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >&)' first required here
  110 | class ThreadLocalStorage<
      |       ^~~~~~~~~~~~~~~~~~~
  111 |     MapSingleReads<
      |     ~~~~~~~~~~~~~~~
  112 |         TMatches_,
      |         ~~~~~~~~~~
  113 |         TFragmentStore,
      |         ~~~~~~~~~~~~~~~
  114 |         TFilterFinder_,
      |         ~~~~~~~~~~~~~~~
  115 |         TFilterPattern_,
      |         ~~~~~~~~~~~~~~~~
  116 |         TShape,
      |         ~~~~~~~
  117 |         TOptions,
      |         ~~~~~~~~~
  118 |         TCounts,
      |         ~~~~~~~~
  119 |         TRazerSMode> >
      |         ~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >& seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:2948:40:   required from 'void seqan::_mapSingleReadsToContig(TMatches&, TFragmentStore&, unsigned int, Pattern<TReadIndex, TFilterSpec>&, TCounts&, char, TRazerSOptions&, const TRazerSMode&) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TFilterSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; TCounts = String<String<short unsigned int> >; TRazerSOptions = RazerSCoreOptions<RazerSSpec<> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3054:36:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3343:31:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   required from 'bool seqan::processRead(PairedMatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:962:32:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >&, String<TString*>&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinderL = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterFinderR = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterPattern = Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1314:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:519:11: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  519 |     class Pattern<TIndex, Swift<TSpec> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: note: synthesized method 'seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >& seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >::operator=(const seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >&)' first required here
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >& seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_match_filter.h:251:20:   required from 'bool seqan::processRead(MatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:466:36:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, String<SingleVerificationResult<TMatches> >&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:769:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:519:11: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  519 |     class Pattern<TIndex, Swift<TSpec> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: note: synthesized method 'seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >& seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >::operator=(const seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >&)' first required here
  110 | class ThreadLocalStorage<
      |       ^~~~~~~~~~~~~~~~~~~
  111 |     MapSingleReads<
      |     ~~~~~~~~~~~~~~~
  112 |         TMatches_,
      |         ~~~~~~~~~~
  113 |         TFragmentStore,
      |         ~~~~~~~~~~~~~~~
  114 |         TFilterFinder_,
      |         ~~~~~~~~~~~~~~~
  115 |         TFilterPattern_,
      |         ~~~~~~~~~~~~~~~~
  116 |         TShape,
      |         ~~~~~~~
  117 |         TOptions,
      |         ~~~~~~~~~
  118 |         TCounts,
      |         ~~~~~~~~
  119 |         TRazerSMode> >
      |         ~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >& seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   required from 'bool seqan::processRead(PairedMatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:962:32:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >&, String<TString*>&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinderL = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >; TFilterFinderR = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >; TFilterPattern = Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1314:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:318:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  318 |     class Pattern<TIndex, Pigeonhole<TSpec> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: note: synthesized method 'seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >& seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >::operator=(const seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >&)' first required here
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >& seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_match_filter.h:251:20:   required from 'bool seqan::processRead(MatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:466:36:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, String<SingleVerificationResult<TMatches> >&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:769:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:318:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  318 |     class Pattern<TIndex, Pigeonhole<TSpec> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: note: synthesized method 'seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >& seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >::operator=(const seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >&)' first required here
  110 | class ThreadLocalStorage<
      |       ^~~~~~~~~~~~~~~~~~~
  111 |     MapSingleReads<
      |     ~~~~~~~~~~~~~~~
  112 |         TMatches_,
      |         ~~~~~~~~~~
  113 |         TFragmentStore,
      |         ~~~~~~~~~~~~~~~
  114 |         TFilterFinder_,
      |         ~~~~~~~~~~~~~~~
  115 |         TFilterPattern_,
      |         ~~~~~~~~~~~~~~~~
  116 |         TShape,
      |         ~~~~~~~
  117 |         TOptions,
      |         ~~~~~~~~~
  118 |         TCounts,
      |         ~~~~~~~~
  119 |         TRazerSMode> >
      |         ~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >& seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   required from 'bool seqan::processRead(PairedMatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:962:32:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >&, String<TString*>&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinderL = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TFilterFinderR = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TFilterPattern = Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1314:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:519:11: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  519 |     class Pattern<TIndex, Swift<TSpec> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: note: synthesized method 'seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >& seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >::operator=(const seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >&)' first required here
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >& seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_match_filter.h:251:20:   required from 'bool seqan::processRead(MatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:466:36:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, String<SingleVerificationResult<TMatches> >&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:769:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:519:11: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  519 |     class Pattern<TIndex, Swift<TSpec> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: note: synthesized method 'seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >& seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >::operator=(const seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >&)' first required here
  110 | class ThreadLocalStorage<
      |       ^~~~~~~~~~~~~~~~~~~
  111 |     MapSingleReads<
      |     ~~~~~~~~~~~~~~~
  112 |         TMatches_,
      |         ~~~~~~~~~~
  113 |         TFragmentStore,
      |         ~~~~~~~~~~~~~~~
  114 |         TFilterFinder_,
      |         ~~~~~~~~~~~~~~~
  115 |         TFilterPattern_,
      |         ~~~~~~~~~~~~~~~~
  116 |         TShape,
      |         ~~~~~~~
  117 |         TOptions,
      |         ~~~~~~~~~
  118 |         TCounts,
      |         ~~~~~~~~
  119 |         TRazerSMode> >
      |         ~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >& seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   required from 'bool seqan::processRead(PairedMatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:962:32:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >&, String<TString*>&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinderL = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >; TFilterFinderR = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >; TFilterPattern = Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1314:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >& seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_match_filter.h:251:20:   required from 'bool seqan::processRead(MatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:466:36:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, String<SingleVerificationResult<TMatches> >&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:769:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  110 | class ThreadLocalStorage<
      |       ^~~~~~~~~~~~~~~~~~~
  111 |     MapSingleReads<
      |     ~~~~~~~~~~~~~~~
  112 |         TMatches_,
      |         ~~~~~~~~~~
  113 |         TFragmentStore,
      |         ~~~~~~~~~~~~~~~
  114 |         TFilterFinder_,
      |         ~~~~~~~~~~~~~~~
  115 |         TFilterPattern_,
      |         ~~~~~~~~~~~~~~~~
  116 |         TShape,
      |         ~~~~~~~
  117 |         TOptions,
      |         ~~~~~~~~~
  118 |         TCounts,
      |         ~~~~~~~~
  119 |         TRazerSMode> >
      |         ~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >& seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   required from 'bool seqan::processRead(PairedMatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:962:32:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >&, String<TString*>&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinderL = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterFinderR = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterPattern = Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1314:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >& seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_match_filter.h:251:20:   required from 'bool seqan::processRead(MatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:466:36:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, String<SingleVerificationResult<TMatches> >&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:769:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 | class ThreadLocalStorage<
      |       ^~~~~~~~~~~~~~~~~~~
  111 |     MapSingleReads<
      |     ~~~~~~~~~~~~~~~
  112 |         TMatches_,
      |         ~~~~~~~~~~
  113 |         TFragmentStore,
      |         ~~~~~~~~~~~~~~~
  114 |         TFilterFinder_,
      |         ~~~~~~~~~~~~~~~
  115 |         TFilterPattern_,
      |         ~~~~~~~~~~~~~~~~
  116 |         TShape,
      |         ~~~~~~~
  117 |         TOptions,
      |         ~~~~~~~~~
  118 |         TCounts,
      |         ~~~~~~~~
  119 |         TRazerSMode> >
      |         ~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >& seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   required from 'bool seqan::processRead(PairedMatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:962:32:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >&, String<TString*>&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinderL = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >; TFilterFinderR = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >; TFilterPattern = Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1314:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >& seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_match_filter.h:251:20:   required from 'bool seqan::processRead(MatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:466:36:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, String<SingleVerificationResult<TMatches> >&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:769:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  110 | class ThreadLocalStorage<
      |       ^~~~~~~~~~~~~~~~~~~
  111 |     MapSingleReads<
      |     ~~~~~~~~~~~~~~~
  112 |         TMatches_,
      |         ~~~~~~~~~~
  113 |         TFragmentStore,
      |         ~~~~~~~~~~~~~~~
  114 |         TFilterFinder_,
      |         ~~~~~~~~~~~~~~~
  115 |         TFilterPattern_,
      |         ~~~~~~~~~~~~~~~~
  116 |         TShape,
      |         ~~~~~~~
  117 |         TOptions,
      |         ~~~~~~~~~
  118 |         TCounts,
      |         ~~~~~~~~
  119 |         TRazerSMode> >
      |         ~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >& seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   required from 'bool seqan::processRead(PairedMatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:962:32:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >&, String<TString*>&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinderL = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TFilterFinderR = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TFilterPattern = Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:1314:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >& seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_match_filter.h:251:20:   required from 'bool seqan::processRead(MatchFilter<TOptionsSpec, TReadSeqSet, TCallback>&, unsigned int) [with TOptionsSpec = RazerSSpec<>; TReadSeqSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCallback = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:466:36:   required from 'void seqan::writeBackToLocal(ThreadLocalStorage<MapSingleReads<TMatches_, TFragmentStore, TFilterFinder_, TFilterPattern_, TShape, TOptions, TCounts, TRazerSMode> >&, String<SingleVerificationResult<TMatches> >&, bool) [with TMatches = String<MatchRecord<long unsigned int>, Alloc<> >; TFragmentStore = FragmentStore<MyFragStoreConfig>; TFilterFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TFilterPattern = Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TOptions = RazerSCoreOptions<RazerSSpec<> >; TCounts = String<String<short unsigned int> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:769:29:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_parallel.h:110:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 | class ThreadLocalStorage<
      |       ^~~~~~~~~~~~~~~~~~~
  111 |     MapSingleReads<
      |     ~~~~~~~~~~~~~~~
  112 |         TMatches_,
      |         ~~~~~~~~~~
  113 |         TFragmentStore,
      |         ~~~~~~~~~~~~~~~
  114 |         TFilterFinder_,
      |         ~~~~~~~~~~~~~~~
  115 |         TFilterPattern_,
      |         ~~~~~~~~~~~~~~~~
  116 |         TShape,
      |         ~~~~~~~
  117 |         TOptions,
      |         ~~~~~~~~~
  118 |         TCounts,
      |         ~~~~~~~~
  119 |         TRazerSMode> >
      |         ~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >& seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::operator=(const seqan::ThreadLocalStorage<seqan::MapSingleReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:56:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_base.h:151:37:   required from 'typename seqan::Convert<TTarget, const seqan::Proxy<TSourceSpec> >::Type seqan::convertImpl(Convert<TTarget, T>, const Proxy<TSourceSpec>&) [with TTarget = char; T = Proxy<IteratorProxy<Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >; TSpec = IteratorProxy<Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > >; typename Convert<TTarget, const Proxy<TSourceSpec> >::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_conversion.h:149:23:   required from 'typename seqan::Convert<TTarget, TSource>::Type seqan::convert(const TSource&) [with TTarget = char; TSource = Proxy<IteratorProxy<Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >; typename Convert<TTarget, TSource>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:241:45:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecH = AnchorGaps<String<GapAnchor<int> > >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecV = AnchorGaps<String<GapAnchor<int> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:471:31:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorSemiGlobalGotoh]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1215:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecH = AnchorGaps<String<GapAnchor<int> > >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecV = AnchorGaps<String<GapAnchor<int> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:471:31:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorSemiGlobalGotoh]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1215:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:46:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecH = AnchorGaps<String<GapAnchor<int> > >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecV = AnchorGaps<String<GapAnchor<int> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:471:31:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorSemiGlobalGotoh]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1215:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecH = AnchorGaps<String<GapAnchor<int> > >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecV = AnchorGaps<String<GapAnchor<int> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:471:31:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorSemiGlobalGotoh]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1215:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TParam = const ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >, Tag<Tristate_> >; TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Value<TContext>::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_paired_match_filter.h:160:64:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(const seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:56:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:357:37:   required from 'typename seqan::Convert<seqan::ModifiedAlphabet<THost, seqan::ModExpand<CHAR, TSpec> >, seqan::Proxy<TSpec2> >::Type seqan::convertImpl(Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, T>, const Proxy<TSpec2>&) [with THost = SimpleType<unsigned char, Dna5Q_>; char CHAR = '-'; TSpec = Tag<Default_>; T = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >; TSpec2 = IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > >; typename Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, Proxy<TSpec2> >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_conversion.h:149:23:   required from 'typename seqan::Convert<TTarget, TSource>::Type seqan::convert(const TSource&) [with TTarget = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >; TSource = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >; typename Convert<TTarget, TSource>::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:92:59:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:17:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_base.h:151:37:   required from 'typename seqan::Convert<TTarget, const seqan::Proxy<TSourceSpec> >::Type seqan::convertImpl(Convert<TTarget, T>, const Proxy<TSourceSpec>&) [with TTarget = char; T = Proxy<IteratorProxy<Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > > >; TSpec = IteratorProxy<Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > > >; typename Convert<TTarget, const Proxy<TSourceSpec> >::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_conversion.h:149:23:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:994:55:   required from 'void seqan::_computeHammingDistance(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:612:32:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorSemiGlobalGotoh]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1215:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:45:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorSemiGlobalGotoh]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1215:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorSemiGlobalGotoh]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1215:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<const seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(const ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > >; typename Container<const ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:314:32:   required from 'typename seqan::Position<const seqan::ModifiedIterator<THost, seqan::Tag<seqan::ModReverse_> > >::Type seqan::position(const ModifiedIterator<THost, Tag<ModReverse_> >&) [with THost = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; typename Position<const ModifiedIterator<THost, Tag<ModReverse_> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:675:73:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorSemiGlobalGotoh]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1215:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:288:16: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  288 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:56:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >; TGapAnchors = String<GapAnchor<int> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<int> > > >, GapsIterator<AnchorGaps<String<GapAnchor<int> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_base.h:151:37:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorEditDistance]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1210:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > >; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:30:   required from 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:397:81:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSeqHValue = SimpleType<unsigned char, Dna5Q_>; TSeqVValue = SimpleType<unsigned char, Dna5Q_>; TSeqVIterator = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<AffineGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPFinalColumn_>, Tag<PartialColumnTop_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:891:38:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TBamIOFunctor = BamAlignFunctorSemiGlobalGotoh]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1215:32:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazerSMode = RazerSMode<RazerSLocal, RazerSGapped, RazerSErrors, NMatchesNone_>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1301:27:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSLocal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/outputFormat.h:1345:31:   required from 'int seqan::dumpMatches(FragmentStore<TSpec, TConfig>&, TCounts&, CharString, RazerSOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:257:20:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:889:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:924:24:   required from 'void seqan::assign(Holder<TValue, Tag<Tristate_> >&, const Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:150:15:   required from 'const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >& seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::operator=(const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >&) [with TValue = seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:519:11:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:889:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:924:24:   required from 'void seqan::assign(Holder<TValue, Tag<Tristate_> >&, const Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:150:15:   required from 'const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >& seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::operator=(const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >&) [with TValue = seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:318:11:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:889:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:924:24:   required from 'void seqan::assign(Holder<TValue, Tag<Tristate_> >&, const Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:150:15:   required from 'const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >& seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::operator=(const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >&) [with TValue = seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:519:11:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:889:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:924:24:   required from 'void seqan::assign(Holder<TValue, Tag<Tristate_> >&, const Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:150:15:   required from 'const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >& seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::operator=(const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >&) [with TValue = seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:318:11:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:889:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:924:24:   required from 'void seqan::assign(Holder<TValue, Tag<Tristate_> >&, const Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:150:15:   required from 'const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >& seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::operator=(const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >&) [with TValue = seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:519:11:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:889:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:924:24:   required from 'void seqan::assign(Holder<TValue, Tag<Tristate_> >&, const Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:150:15:   required from 'const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >& seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::operator=(const seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >&) [with TValue = seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:519:11:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TSource = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >; TValue2 = ThreadLocalStorage<MapSingleReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3354:39:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3422:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesAll_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesAll_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3431:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesAll_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<void> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<void> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<void> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<void> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<void> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<void> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<void> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSGapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSGapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3443:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<void> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSGapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Pigeonhole<Hamming_> >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<Hamming_> >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<OpenAddressing_> > >, Pigeonhole<Hamming_> >, Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3376:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Pigeonhole<seqan::Hamming_> >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >*; TParam = seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TParam = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TSource1 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*; TSource2 = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = ThreadLocalStorage<MapPairedReads<String<MatchRecord<long unsigned int>, Alloc<> >, FragmentStore<MyFragStoreConfig>, Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Pattern<Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<OpenAddressing_> > >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >, Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, RazerSCoreOptions<RazerSSpec<> >, String<String<short unsigned int> >, RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_> > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3351:45:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TShape&, const TRazerSMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TRazerSMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3381:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, const TRazersMode&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TRazersMode = RazerSMode<RazerSGlobal, RazerSUngapped, RazerSErrors, NMatchesNone_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3396:25:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&, RazerSMode<TAlignMode, TGapMode, Tag<Nothing_>, TMatchNPolicy>) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TAlignMode = RazerSGlobal; TGapMode = RazerSUngapped; TMatchNPolicy = NMatchesNone_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:3452:33:   required from 'int seqan::_mapReads(FragmentStore<TSpec, TConfig>&, TCounts&, RazerSCoreOptions<TSpec>&) [with TFSSpec = MyFragStoreConfig; TFSConfig = FragmentStoreConfig<MyFragStoreConfig>; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:235:26:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.cpp:866:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers_matepairs_parallel.h:84:7: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   84 | class ThreadLocalStorage<MapPairedReads<TMatches_, TFragmentStore, TFilterFinderL_, TFilterFinderR_, TFilterPattern_, TShape_, TOptions, TCounts, TRazerSMode> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >::ThreadLocalStorage(seqan::ThreadLocalStorage<seqan::MapPairedReads<seqan::String<seqan::MatchRecord<long unsigned int>, seqan::Alloc<> >, seqan::FragmentStore<MyFragStoreConfig>, seqan::Finder<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Finder<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Pattern<seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> > > >, seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::RazerSCoreOptions<seqan::RazerSSpec<> >, seqan::String<seqan::String<short unsigned int> >, seqan::RazerSMode<seqan::RazerSGlobal, seqan::RazerSUngapped, seqan::RazerSErrors, seqan::NMatchesNone_> > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::parseGappedParams(RazerSOptions<TSpec>&, TFile&, ParamChooserOptions&) [with TFile = std::basic_fstream<char>; TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/paramChooser.h:992:51,
    inlined from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/paramChooser.h:1285:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  3%] Building CXX object apps/razers/CMakeFiles/razers.dir/param_tabs.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.5.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/razers/CMakeFiles/razers.dir/param_tabs.cpp.o -MF CMakeFiles/razers.dir/param_tabs.cpp.o.d -o CMakeFiles/razers.dir/param_tabs.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/param_tabs.cpp
[  3%] Linking CXX executable ../../bin/razers
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers && /usr/bin/cmake -E cmake_link_script CMakeFiles/razers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/razers.dir/razers.cpp.o CMakeFiles/razers.dir/param_tabs.cpp.o -o ../../bin/razers  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target razers
make  -f apps/razers3/CMakeFiles/razers3_simulate_reads.dir/build.make apps/razers3/CMakeFiles/razers3_simulate_reads.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3_simulate_reads.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/razers3/CMakeFiles/razers3_simulate_reads.dir/build.make apps/razers3/CMakeFiles/razers3_simulate_reads.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/razers3/CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"3.5.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/razers3/CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o -MF CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o.d -o CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/simulate_reads.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/simulate_reads.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/simulate_reads.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/simulate_reads.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/simulate_reads.cpp:120:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/simulate_reads.cpp:120:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/simulate_reads.cpp:120:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/simulate_reads.cpp:120:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/simulate_reads.cpp:120:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[  3%] Linking CXX executable ../../bin/razers3_simulate_reads
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/razers3_simulate_reads.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o -o ../../bin/razers3_simulate_reads  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target razers3_simulate_reads
make  -f apps/razers3/CMakeFiles/razers3_quality2prob.dir/build.make apps/razers3/CMakeFiles/razers3_quality2prob.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3_quality2prob.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/razers3/CMakeFiles/razers3_quality2prob.dir/build.make apps/razers3/CMakeFiles/razers3_quality2prob.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/razers3/CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"3.5.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/razers3/CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o -MF CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o.d -o CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:34,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:845:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  845 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:862:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  862 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:896:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  896 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:934:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  934 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:968:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  968 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1009:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1009 |     public std::binary_function<TReadMatch, TReadMatch, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1046:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1046 |     public std::binary_function<TReadMatch, TReadMatch, int>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1087:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1087 |     public std::binary_function<typename Value<TAlignedReadStore>::Type, typename Value<TAlignedReadStore>::Type, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1130:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1130 |     public std::binary_function<typename Value<TAlignedReadStore>::Type, typename Value<TAlignedReadStore>::Type, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1174:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1174 |     public std::binary_function<typename Value<TAlignedReadStore>::Type, typename Value<TAlignedReadStore>::Type, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/razers.h:1218:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1218 |     public std::binary_function<typename Value<TAlignedReadStore>::Type, typename Value<TAlignedReadStore>::Type, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp:42:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp:42:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp:42:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp:42:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/quality2prob.cpp:42:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::parseGappedParams(RazerSOptions<TSpec>&, TFile&, ParamChooserOptions&) [with TFile = std::basic_fstream<char>; TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/paramChooser.h:993:51,
    inlined from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/paramChooser.h:1286:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::parseGappedParams(RazerSOptions<TSpec>&, TFile&, ParamChooserOptions&) [with TFile = std::basic_fstream<char>; TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/paramChooser.h:1011:66,
    inlined from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/paramChooser.h:1286:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::parseGappedParams(RazerSOptions<TSpec>&, TFile&, ParamChooserOptions&) [with TFile = std::basic_fstream<char>; TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/paramChooser.h:1021:53,
    inlined from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/paramChooser.h:1286:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  3%] Linking CXX executable ../../bin/razers3_quality2prob
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/razers3_quality2prob.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o -o ../../bin/razers3_quality2prob  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target razers3_quality2prob
make  -f apps/rep_sep/CMakeFiles/rep_sep.dir/build.make apps/rep_sep/CMakeFiles/rep_sep.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rep_sep /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rep_sep/CMakeFiles/rep_sep.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/rep_sep/CMakeFiles/rep_sep.dir/build.make apps/rep_sep/CMakeFiles/rep_sep.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/rep_sep/CMakeFiles/rep_sep.dir/rep_sep.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rep_sep && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.1.11\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/rep_sep/CMakeFiles/rep_sep.dir/rep_sep.cpp.o -MF CMakeFiles/rep_sep.dir/rep_sep.cpp.o.d -o CMakeFiles/rep_sep.dir/rep_sep.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rep_sep.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rep_sep.cpp:27:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rep_sep.cpp:22:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rep_sep.cpp:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = GraphCargo<Triple<char, unsigned int, long unsigned int>, AlignedReadStoreElement<long int, GapAnchor<long int>, void>, long unsigned int>; TSource = GraphCargo<Triple<char, unsigned int, long unsigned int>, AlignedReadStoreElement<long int, GapAnchor<long int>, void>, long unsigned int>; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:702:11:   required from 'void seqan::assignValue(T&, TPos, const TValue&) [with T = String<GraphCargo<Triple<char, unsigned int, long unsigned int>, AlignedReadStoreElement<long int, GapAnchor<long int>, void>, long unsigned int>, Alloc<> >; TValue = GraphCargo<Triple<char, unsigned int, long unsigned int>, AlignedReadStoreElement<long int, GapAnchor<long int>, void>, long unsigned int>; TPos = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/property_map_generic.h:186:16:   required from 'typename seqan::EnableIf<seqan::Is<seqan::PropertyMapConcept<TString> >, void>::Type seqan::assignProperty(TPropertyMap&, TDescriptor, TValue) [with TPropertyMap = String<GraphCargo<Triple<char, unsigned int, long unsigned int>, AlignedReadStoreElement<long int, GapAnchor<long int>, void>, long unsigned int>, Alloc<> >; TDescriptor = unsigned int; TValue = GraphCargo<Triple<char, unsigned int, long unsigned int>, AlignedReadStoreElement<long int, GapAnchor<long int>, void>, long unsigned int>; typename EnableIf<Is<PropertyMapConcept<TString> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rgraph_base.h:191:23:   required from 'GraphCargo<TColumnAlphabet, TAlignedReadStoreElement, TPosition>& registerRead(ReadGraph<TColumnAlphabet, TAlignedReadStoreElement, TPosition>&, typename ReadGraph<TColumnAlphabet, TAlignedReadStoreElement, TPosition>::TId) [with TColumnAlphabet = seqan::Triple<char, unsigned int, long unsigned int>; TAlignedReadStoreElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>; TPosition = long unsigned int; typename ReadGraph<TColumnAlphabet, TAlignedReadStoreElement, TPosition>::TId = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rgraph_construction.h:82:59:   required from 'void construct(ReadGraph<TColumnAlphabet, TAlignedReadStoreElement, TPosition>&, const seqan::String<seqan::Pair<TPosition, seqan::String<TString> > >&, const seqan::FragmentStore<TSpec, TConfig>&, TId) [with TColumnAlphabet = seqan::Triple<char, unsigned int, long unsigned int>; TAlignedReadStoreElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>; TPosition = long unsigned int; TSpec = void; TConfig = seqan::FragmentStoreConfig<void>; TId = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rep_sep.cpp:217:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'GraphCargo<seqan::Triple<char, unsigned int, long unsigned int>, seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>, long unsigned int>& GraphCargo<seqan::Triple<char, unsigned int, long unsigned int>, seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>, long unsigned int>::operator=(const GraphCargo<seqan::Triple<char, unsigned int, long unsigned int>, seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>, long unsigned int>&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rgraph.h:32,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rep_sep.cpp:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep/rgraph_base.h:44:5: note: because 'GraphCargo<seqan::Triple<char, unsigned int, long unsigned int>, seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>, long unsigned int>' has user-provided 'GraphCargo<TColumnAlphabet, TAlignedReadStoreElement, TPosition>::GraphCargo(const GraphCargo<TColumnAlphabet, TAlignedReadStoreElement, TPosition>&) [with TColumnAlphabet = seqan::Triple<char, unsigned int, long unsigned int>; TAlignedReadStoreElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>; TPosition = long unsigned int]'
   44 |     GraphCargo(GraphCargo const& other)
      |     ^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = Segment<String<char, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = Segment<String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long int; TSource = Segment<String<char, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long int; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long int; TSource = Segment<String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long int; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  3%] Linking CXX executable ../../bin/rep_sep
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rep_sep && /usr/bin/cmake -E cmake_link_script CMakeFiles/rep_sep.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/rep_sep.dir/rep_sep.cpp.o -o ../../bin/rep_sep  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target rep_sep
make  -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak/CMakeFiles/sak.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/sak/CMakeFiles/sak.dir/sak.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.4.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/sak/CMakeFiles/sak.dir/sak.cpp.o -MF CMakeFiles/sak.dir/sak.cpp.o.d -o CMakeFiles/sak.dir/sak.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:337:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:337:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:337:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:347:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:337:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/tokenization.h:489:23:   required from 'void seqan::writeWrappedString(TTarget&, const TSequence&, TSize) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:468:23:   required from 'typename seqan::EnableIf<seqan::Not<seqan::IsSameType<TFwdIterator, seqan::FormattedFile<seqan::Tag<seqan::TagFastq_>, seqan::Tag<seqan::Output_> > > >, void>::Type seqan::writeRecord(TTarget&, const TIdString&, const TSeqString&, const TQualString&, const Fastq&, const SequenceOutputOptions&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; typename EnableIf<Not<IsSameType<TFwdIterator, FormattedFile<Tag<TagFastq_>, Tag<Output_> > > >, void>::Type = void; Fastq = Tag<TagFastq_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:423:16:   required from 'void seqan::writeRecord(FormattedFile<Tag<TagFastq_>, Tag<Output_>, TSpec>&, const TIdString&, const TSeqString&, const TQualString&, const Tag<TUsage>&) [with TSpec = void; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; TagSpec = TagFastq_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:506:20:   required from 'void seqan::writeRecord(FormattedFile<Tag<TagFastq_>, Tag<Output_>, TSpec>&, const TIdString&, const TSeqString&, const TQualString&, const TagSelector<TTagList>&) [with TSpec = void; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:519:16:   required from 'typename seqan::EnableIf<seqan::And<seqan::Is<seqan::OutputStreamConcept<typename TFile::TStream> >, seqan::IsSequence<TQualString> >, void>::Type seqan::writeRecord(TFile&, const TIdString&, const TSeqString&, const TQualString&) [with TFile = FormattedFile<Tag<TagFastq_>, Tag<Output_> >; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Is<OutputStreamConcept<typename TFile::TStream> >, IsSequence<TQualString> >, void>::Type = void; typename TFile::TStream = VirtualStream<char, Tag<Output_>, std::char_traits<char> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:424:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/tokenization.h:489:23:   required from 'void seqan::writeWrappedString(TTarget&, const TSequence&, TSize) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TSequence = Segment<String<char, Alloc<> >, InfixSegment>; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:475:23:   required from 'typename seqan::EnableIf<seqan::Not<seqan::IsSameType<TFwdIterator, seqan::FormattedFile<seqan::Tag<seqan::TagFastq_>, seqan::Tag<seqan::Output_> > > >, void>::Type seqan::writeRecord(TTarget&, const TIdString&, const TSeqString&, const TQualString&, const Fastq&, const SequenceOutputOptions&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; typename EnableIf<Not<IsSameType<TFwdIterator, FormattedFile<Tag<TagFastq_>, Tag<Output_> > > >, void>::Type = void; Fastq = Tag<TagFastq_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:423:16:   required from 'void seqan::writeRecord(FormattedFile<Tag<TagFastq_>, Tag<Output_>, TSpec>&, const TIdString&, const TSeqString&, const TQualString&, const Tag<TUsage>&) [with TSpec = void; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; TagSpec = TagFastq_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:506:20:   required from 'void seqan::writeRecord(FormattedFile<Tag<TagFastq_>, Tag<Output_>, TSpec>&, const TIdString&, const TSeqString&, const TQualString&, const TagSelector<TTagList>&) [with TSpec = void; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:519:16:   required from 'typename seqan::EnableIf<seqan::And<seqan::Is<seqan::OutputStreamConcept<typename TFile::TStream> >, seqan::IsSequence<TQualString> >, void>::Type seqan::writeRecord(TFile&, const TIdString&, const TSeqString&, const TQualString&) [with TFile = FormattedFile<Tag<TagFastq_>, Tag<Output_> >; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Is<OutputStreamConcept<typename TFile::TStream> >, IsSequence<TQualString> >, void>::Type = void; typename TFile::TStream = VirtualStream<char, Tag<Output_>, std::char_traits<char> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:424:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/tokenization.h:489:23:   required from 'void seqan::writeWrappedString(TTarget&, const TSequence&, TSize) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:468:23:   required from 'typename seqan::EnableIf<seqan::Not<seqan::IsSameType<TFwdIterator, seqan::FormattedFile<seqan::Tag<seqan::TagFastq_>, seqan::Tag<seqan::Output_> > > >, void>::Type seqan::writeRecord(TTarget&, const TIdString&, const TSeqString&, const TQualString&, const Fastq&, const SequenceOutputOptions&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; typename EnableIf<Not<IsSameType<TFwdIterator, FormattedFile<Tag<TagFastq_>, Tag<Output_> > > >, void>::Type = void; Fastq = Tag<TagFastq_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:423:16:   required from 'void seqan::writeRecord(FormattedFile<Tag<TagFastq_>, Tag<Output_>, TSpec>&, const TIdString&, const TSeqString&, const TQualString&, const Tag<TUsage>&) [with TSpec = void; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; TagSpec = TagFastq_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:506:20:   required from 'void seqan::writeRecord(FormattedFile<Tag<TagFastq_>, Tag<Output_>, TSpec>&, const TIdString&, const TSeqString&, const TQualString&, const TagSelector<TTagList>&) [with TSpec = void; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:519:16:   required from 'typename seqan::EnableIf<seqan::And<seqan::Is<seqan::OutputStreamConcept<typename TFile::TStream> >, seqan::IsSequence<TQualString> >, void>::Type seqan::writeRecord(TFile&, const TIdString&, const TSeqString&, const TQualString&) [with TFile = FormattedFile<Tag<TagFastq_>, Tag<Output_> >; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Is<OutputStreamConcept<typename TFile::TStream> >, IsSequence<TQualString> >, void>::Type = void; typename TFile::TStream = VirtualStream<char, Tag<Output_>, std::char_traits<char> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:424:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/tokenization.h:489:23:   required from 'void seqan::writeWrappedString(TTarget&, const TSequence&, TSize) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TSequence = Segment<String<char, Alloc<> >, InfixSegment>; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:475:23:   required from 'typename seqan::EnableIf<seqan::Not<seqan::IsSameType<TFwdIterator, seqan::FormattedFile<seqan::Tag<seqan::TagFastq_>, seqan::Tag<seqan::Output_> > > >, void>::Type seqan::writeRecord(TTarget&, const TIdString&, const TSeqString&, const TQualString&, const Fastq&, const SequenceOutputOptions&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; typename EnableIf<Not<IsSameType<TFwdIterator, FormattedFile<Tag<TagFastq_>, Tag<Output_> > > >, void>::Type = void; Fastq = Tag<TagFastq_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:423:16:   required from 'void seqan::writeRecord(FormattedFile<Tag<TagFastq_>, Tag<Output_>, TSpec>&, const TIdString&, const TSeqString&, const TQualString&, const Tag<TUsage>&) [with TSpec = void; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; TagSpec = TagFastq_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:506:20:   required from 'void seqan::writeRecord(FormattedFile<Tag<TagFastq_>, Tag<Output_>, TSpec>&, const TIdString&, const TSeqString&, const TQualString&, const TagSelector<TTagList>&) [with TSpec = void; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/sequence_file.h:519:16:   required from 'typename seqan::EnableIf<seqan::And<seqan::Is<seqan::OutputStreamConcept<typename TFile::TStream> >, seqan::IsSequence<TQualString> >, void>::Type seqan::writeRecord(TFile&, const TIdString&, const TSeqString&, const TQualString&) [with TFile = FormattedFile<Tag<TagFastq_>, Tag<Output_> >; TIdString = String<char, Alloc<> >; TSeqString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TQualString = Segment<String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Is<OutputStreamConcept<typename TFile::TStream> >, IsSequence<TQualString> >, void>::Type = void; typename TFile::TStream = VirtualStream<char, Tag<Output_>, std::char_traits<char> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/sak.cpp:424:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  3%] Linking CXX executable ../../bin/sak
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak && /usr/bin/cmake -E cmake_link_script CMakeFiles/sak.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/sak.dir/sak.cpp.o -o ../../bin/sak  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target sak
make  -f apps/sam2matrix/CMakeFiles/sam2matrix.dir/build.make apps/sam2matrix/CMakeFiles/sam2matrix.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sam2matrix /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sam2matrix/CMakeFiles/sam2matrix.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/sam2matrix/CMakeFiles/sam2matrix.dir/build.make apps/sam2matrix/CMakeFiles/sam2matrix.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/sam2matrix/CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sam2matrix && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/sam2matrix/CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o -MF CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o.d -o CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp:145:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp:145:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp:145:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp:145:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/sam2matrix.cpp:145:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  3%] Linking CXX executable ../../bin/sam2matrix
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sam2matrix && /usr/bin/cmake -E cmake_link_script CMakeFiles/sam2matrix.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o -o ../../bin/sam2matrix  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target sam2matrix
make  -f apps/samcat/CMakeFiles/samcat.dir/build.make apps/samcat/CMakeFiles/samcat.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/samcat /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/samcat/CMakeFiles/samcat.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/samcat/CMakeFiles/samcat.dir/build.make apps/samcat/CMakeFiles/samcat.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/samcat/CMakeFiles/samcat.dir/samcat.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/samcat && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/samcat/CMakeFiles/samcat.dir/samcat.cpp.o -MF CMakeFiles/samcat.dir/samcat.cpp.o.d -o CMakeFiles/samcat.dir/samcat.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/samcat.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/samcat.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/samcat.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/samcat.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  3%] Building CXX object apps/razers3/CMakeFiles/razers3.dir/param_tabs.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"3.5.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/razers3/CMakeFiles/razers3.dir/param_tabs.cpp.o -MF CMakeFiles/razers3.dir/param_tabs.cpp.o.d -o CMakeFiles/razers3.dir/param_tabs.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/param_tabs.cpp
[  3%] Linking CXX executable ../../bin/razers3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/razers3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/razers3.dir/razers.cpp.o CMakeFiles/razers3.dir/param_tabs.cpp.o -o ../../bin/razers3  -lrt -lz -lbz2
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target razers3
make  -f apps/searchjoin/CMakeFiles/s4_search.dir/build.make apps/searchjoin/CMakeFiles/s4_search.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin/CMakeFiles/s4_search.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/searchjoin/CMakeFiles/s4_search.dir/build.make apps/searchjoin/CMakeFiles/s4_search.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/searchjoin/CMakeFiles/s4_search.dir/search.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin && /usr/bin/c++ -DSEARCHJOIN_HUGEDB=TRUE -DSEQAN_APP_VERSION=\"0.5.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/searchjoin/CMakeFiles/s4_search.dir/search.cpp.o -MF CMakeFiles/s4_search.dir/search.cpp.o.d -o CMakeFiles/s4_search.dir/search.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/parallel/base.h:36,
                 from /usr/include/c++/13/parallel/algobase.h:40,
                 from /usr/include/c++/13/parallel/algorithm:36,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:48:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
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make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/searchjoin/CMakeFiles/s4_join.dir/join.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin && /usr/bin/c++ -DSEARCHJOIN_HUGEDB=TRUE -DSEQAN_APP_VERSION=\"0.5.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/searchjoin/CMakeFiles/s4_join.dir/join.cpp.o -MF CMakeFiles/s4_join.dir/join.cpp.o.d -o CMakeFiles/s4_join.dir/join.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<HugeDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:344:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:282:10:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:142:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void buildQuery(DbIndex<seqan::Index<TText, seqan::IndexSa<TSpec> >, seqan::Tag<Query_> >&, Db<TText, TDbSpec>&, TSeedLength) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::Tag<HugeDb_>; TDbSpec = seqan::Tag<Query_>; TSeedLength = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:374:15:   required from 'void prepare(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&, Db<TText, TDbSpec>&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:323:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:888:32: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  888 |         dbIndex.index[seedSet] = TIndex(db.text);
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<SmallDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:344:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:282:10:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void buildQuery(DbIndex<seqan::Index<TText, seqan::IndexSa<TSpec> >, seqan::Tag<Query_> >&, Db<TText, TDbSpec>&, TSeedLength) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::Tag<SmallDb_>; TDbSpec = seqan::Tag<Query_>; TSeedLength = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:374:15:   required from 'void prepare(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&, Db<TText, TDbSpec>&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:323:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:888:32: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  888 |         dbIndex.index[seedSet] = TIndex(db.text);
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<HugeDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:344:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:405:10:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void buildQuery(DbIndex<seqan::Index<TText, seqan::IndexSa<TSpec> >, seqan::Tag<Query_> >&, Db<TText, TDbSpec>&, TSeedLength) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::Tag<HugeDb_>; TDbSpec = seqan::Tag<Query_>; TSeedLength = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:374:15:   required from 'void prepare(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&, Db<TText, TDbSpec>&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:449:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:888:32: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  888 |         dbIndex.index[seedSet] = TIndex(db.text);
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<SmallDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:344:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:405:10:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void buildQuery(DbIndex<seqan::Index<TText, seqan::IndexSa<TSpec> >, seqan::Tag<Query_> >&, Db<TText, TDbSpec>&, TSeedLength) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::Tag<SmallDb_>; TDbSpec = seqan::Tag<Query_>; TSeedLength = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:374:15:   required from 'void prepare(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&, Db<TText, TDbSpec>&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:449:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:888:32: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  888 |         dbIndex.index[seedSet] = TIndex(db.text);
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:57:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1515:66:   required from 'unsigned int seqan::_computeEditDistanceBanded(const TSeq1&, const TSeq2&, unsigned int) [with TSeq1 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSeq2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:136:52:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:810:30:   required from 'void execute(DbFinder<TText, TIndex, seqan::Tag<Query_>, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:508:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1515:66:   required from 'unsigned int seqan::_computeEditDistanceBanded(const TSeq1&, const TSeq2&, unsigned int) [with TSeq1 = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSeq2 = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:136:52:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:810:30:   required from 'void execute(DbFinder<TText, TIndex, seqan::Tag<Query_>, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:536:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:18:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >, Tag<Query_>, Writer<Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Tag<Query_> >, Tag<Search_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Truncated<Preorder>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Truncated<Preorder>; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Truncated<Preorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:52:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >, Tag<Query_>, Writer<Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Tag<Query_> >, Tag<Search_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/parallel/base.h:36,
                 from /usr/include/c++/13/parallel/algobase.h:40,
                 from /usr/include/c++/13/parallel/algorithm:36,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:48:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:18:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >, Tag<Query_>, Writer<Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Tag<Query_> >, Tag<Search_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Truncated<Preorder>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Truncated<Preorder>; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Truncated<Preorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:52:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >, Tag<Query_>, Writer<Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Tag<Query_> >, Tag<Search_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:18:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >, Tag<Query_>, Writer<Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Tag<Query_> >, Tag<Search_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Truncated<Preorder>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Truncated<Preorder>; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Truncated<Preorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:52:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >, Tag<Query_>, Writer<Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Tag<Query_> >, Tag<Search_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:18:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >, Tag<Query_>, Writer<Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Tag<Query_> >, Tag<Search_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Truncated<Preorder>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Truncated<Preorder>; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Truncated<Preorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:52:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >, Tag<Query_>, Writer<Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Tag<Query_> >, Tag<Search_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1515:66:   required from 'unsigned int seqan::_computeEditDistanceBanded(const TSeq1&, const TSeq2&, unsigned int) [with TSeq1 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSeq2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:136:52:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:810:30:   required from 'void execute(DbFinder<TText, TIndex, seqan::Tag<Query_>, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:508:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1515:66:   required from 'unsigned int seqan::_computeEditDistanceBanded(const TSeq1&, const TSeq2&, unsigned int) [with TSeq1 = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSeq2 = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:136:52:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:810:30:   required from 'void execute(DbFinder<TText, TIndex, seqan::Tag<Query_>, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:536:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<HugeDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::TagExact_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:355:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::TagExact_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:264:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::TagExact_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:319:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:142:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<HugeDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:344:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:264:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void buildQuery(DbIndex<seqan::Index<TText, seqan::IndexSa<TSpec> >, seqan::Tag<Query_> >&, Db<TText, TDbSpec>&, TSeedLength) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::Tag<HugeDb_>; TDbSpec = void; TSeedLength = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:374:15:   required from 'void prepare(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&, Db<TText, TDbSpec>&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:279:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:888:32: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  888 |         dbIndex.index[seedSet] = TIndex(db.text);
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<SmallDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::TagExact_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:355:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::TagExact_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:264:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::TagExact_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:332:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<SmallDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:344:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:264:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void buildQuery(DbIndex<seqan::Index<TText, seqan::IndexSa<TSpec> >, seqan::Tag<Query_> >&, Db<TText, TDbSpec>&, TSeedLength) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::Tag<SmallDb_>; TDbSpec = void; TSeedLength = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:374:15:   required from 'void prepare(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&, Db<TText, TDbSpec>&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:279:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:888:32: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  888 |         dbIndex.index[seedSet] = TIndex(db.text);
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<HugeDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::TagExact_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:355:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::TagExact_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:264:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::TagExact_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:357:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<HugeDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:344:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:264:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void buildQuery(DbIndex<seqan::Index<TText, seqan::IndexSa<TSpec> >, seqan::Tag<Query_> >&, Db<TText, TDbSpec>&, TSeedLength) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::Tag<HugeDb_>; TDbSpec = void; TSeedLength = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:374:15:   required from 'void prepare(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&, Db<TText, TDbSpec>&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:279:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:888:32: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >&)' is deprecated [-Wdeprecated-copy]
  888 |         dbIndex.index[seedSet] = TIndex(db.text);
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<HugeDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<SmallDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::TagExact_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:355:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::TagExact_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:264:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::TagExact_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:370:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void build(DbIndex<seqan::Index<TObject, TSpec>, TDbIndexSpec>&, Db<TText, TDbSpec>&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::IndexSa<seqan::Tag<SmallDb_> >; TDbIndexSpec = void; TDbSpec = void; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:344:10:   required from 'void index(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:264:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:764:19: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  764 |     dbIndex.index = TIndex(db.text);
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h: In instantiation of 'void buildQuery(DbIndex<seqan::Index<TText, seqan::IndexSa<TSpec> >, seqan::Tag<Query_> >&, Db<TText, TDbSpec>&, TSeedLength) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndexSpec = seqan::Tag<SmallDb_>; TDbSpec = void; TSeedLength = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:374:15:   required from 'void prepare(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, TSpec>&, Db<TText, TDbSpec>&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:279:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/db.h:888:32: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >&)' is deprecated [-Wdeprecated-copy]
  888 |         dbIndex.index[seedSet] = TIndex(db.text);
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<SmallDb_>]'
   88 |     Index(Index const & other) :
      |     ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:57:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1515:66:   required from 'unsigned int seqan::_computeEditDistanceBanded(const TSeq1&, const TSeq2&, unsigned int) [with TSeq1 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSeq2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:136:52:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = void; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:791:30:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:311:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ofstream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/writer.h:132:10:   required from 'void _writeRecord(Writer<TDb, TDbQuery, TSpec>&, const TString1&, const TString2&) [with TDb = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>; TDbQuery = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>; TSpec = seqan::Tag<Join_>; TString1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TString2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/writer.h:197:21:   required from 'bool close(Writer<TDb, TDb, seqan::Tag<Join_> >&) [with TDb = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:293:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:311:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ofstream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/writer.h:132:10:   required from 'void _writeRecord(Writer<TDb, TDbQuery, TSpec>&, const TString1&, const TString2&) [with TDb = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>; TDbQuery = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >; TSpec = seqan::Tag<Search_>; TString1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TString2 = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/writer.h:150:17:   required from 'void _write(Writer<TDb, TDbQuery, TSpec>&, typename seqan::Size<TContainer>::Type, typename seqan::Size<TFwdIterator>::Type) [with TDb = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>; TDbQuery = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >; TSpec = seqan::Tag<Search_>; typename seqan::Size<TContainer>::Type = unsigned int; typename seqan::Size<TFwdIterator>::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/writer.h:98:15:   required from 'void Writer<TDb, TDbQuery, TSpec>::operator()(typename seqan::Size<TContainer>::Type, typename seqan::Size<TFwdIterator>::Type) [with TDb = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>; TDbQuery = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >; TSpec = seqan::Tag<Search_>; typename seqan::Size<TContainer>::Type = unsigned int; typename seqan::Size<TFwdIterator>::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:142:13:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:810:30:   required from 'void execute(DbFinder<TText, TIndex, seqan::Tag<Query_>, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:508:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1515:66:   required from 'unsigned int seqan::_computeEditDistanceBanded(const TSeq1&, const TSeq2&, unsigned int) [with TSeq1 = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSeq2 = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:136:52:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = void; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:791:30:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:349:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:18:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >, void, Writer<Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Tag<Join_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Truncated<Preorder>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Truncated<Preorder>; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Truncated<Preorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:52:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >, void, Writer<Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Tag<Join_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:18:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >, void, Writer<Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Tag<Join_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Truncated<Preorder>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Truncated<Preorder>; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Truncated<Preorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:52:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >, void, Writer<Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Tag<Join_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:18:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >, void, Writer<Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Tag<Join_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Truncated<Preorder>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>; TSpec = Truncated<Preorder>; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >; TSpec = Truncated<Preorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:52:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<HugeDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<HugeDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<HugeDb_> > >, void, Writer<Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Tag<Join_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:18:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >, void, Writer<Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Tag<Join_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Truncated<Preorder>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>; TSpec = Truncated<Preorder>; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >; TSpec = Truncated<Preorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:52:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TTextIndexSpec = IndexSa<Tag<SmallDb_> >; TPattern = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TPatternIndexSpec = IndexSa<Tag<SmallDb_> >; TDistance = Tag<HammingDistance_>; TSpec = Tag<Top_>; TStage = StageInitial_; TDelegate = DbFinder<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, Index<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, IndexSa<Tag<SmallDb_> > >, void, Writer<Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Db<StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >, void>, Tag<Join_> >, Tag<Parallel_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:611:14:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1515:66:   required from 'unsigned int seqan::_computeEditDistanceBanded(const TSeq1&, const TSeq2&, unsigned int) [with TSeq1 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSeq2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:136:52:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = void; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:791:30:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:311:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ofstream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/writer.h:132:10:   required from 'void _writeRecord(Writer<TDb, TDbQuery, TSpec>&, const TString1&, const TString2&) [with TDb = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>; TDbQuery = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>; TSpec = seqan::Tag<Join_>; TString1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TString2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/writer.h:197:21:   required from 'bool close(Writer<TDb, TDb, seqan::Tag<Join_> >&) [with TDb = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:293:10:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:311:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1515:66:   required from 'unsigned int seqan::_computeEditDistanceBanded(const TSeq1&, const TSeq2&, unsigned int) [with TSeq1 = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>; TSeq2 = Segment<String<char, Alloc<Tag<StringOfMaxSize256_> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:136:52:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >; TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = void; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:791:30:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:349:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ofstream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/writer.h:132:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/writer.h:98:15:   required from 'void Writer<TDb, TDbQuery, TSpec>::operator()(typename seqan::Size<TContainer>::Type, typename seqan::Size<TFwdIterator>::Type) [with TDb = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>; TDbQuery = Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >; TSpec = seqan::Tag<Search_>; typename seqan::Size<TContainer>::Type = unsigned int; typename seqan::Size<TFwdIterator>::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:142:13:   required from 'bool _verify(Verifier<TText, TSpec>&, typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/verifier.h:78:23:   required from 'bool Verifier<TText, TSpec>::operator()(typename seqan::Size<Db<TText> >::Type, typename seqan::Size<Db<TText, TSpec> >::Type, TDelegate&) [with TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<Query_>; typename seqan::Size<Db<TText> >::Type = unsigned int; typename seqan::Size<Db<TText, TSpec> >::Type = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:810:30:   required from 'void execute(DbFinder<TText, TIndex, seqan::Tag<Query_>, TDelegate, seqan::Tag<Online_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Tag<seqan::Nothing_>; TSpec = seqan::Tag<Online_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:508:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, unsigned char, Tag<Pack_> >, Alloc<Tag<StringOfMaxSize256_> > >; TString = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<unsigned int, unsigned char, Tag<Pack_> >, Alloc<Tag<StringOfMaxSize256_> > >; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSetSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Alloc<Tag<StringOfMaxSize256_> > >; TString = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Alloc<Tag<StringOfMaxSize256_> > >; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSetSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, unsigned char, Tag<Pack_> >, Alloc<Tag<StringOfMaxSize256_> > >; TString = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<unsigned int, unsigned char, Tag<Pack_> >, Alloc<Tag<StringOfMaxSize256_> > >; TSequence = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSetSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Alloc<Tag<StringOfMaxSize256_> > >; TString = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Alloc<Tag<StringOfMaxSize256_> > >; TSequence = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSetSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, int>, unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:524:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:544:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:456:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, Online) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TSpec = seqan::Tag<seqan::Parallel_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; Online = seqan::Tag<Online_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:552:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, int>, unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, int>, unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = seqan::Tag<Query_>; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Tag<Query_> >, seqan::Tag<Search_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:330:12:   required from 'int runSearcher(Options&, const TText&, const TIndex&, TSpec, const seqan::Nothing&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>; seqan::Nothing = seqan::Tag<seqan::Nothing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/search.cpp:516:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, unsigned char, Tag<Pack_> >, Alloc<Tag<StringOfMaxSize256_> > >; TString = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<unsigned int, unsigned char, Tag<Pack_> >, Alloc<Tag<StringOfMaxSize256_> > >; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSetSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Alloc<Tag<StringOfMaxSize256_> > >; TString = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Alloc<Tag<StringOfMaxSize256_> > >; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >; TSetSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, unsigned char, Tag<Pack_> >, Alloc<Tag<StringOfMaxSize256_> > >; TString = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<unsigned int, unsigned char, Tag<Pack_> >, Alloc<Tag<StringOfMaxSize256_> > >; TSequence = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSetSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Alloc<Tag<StringOfMaxSize256_> > >; TString = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Alloc<Tag<StringOfMaxSize256_> > >; TSequence = String<char, Alloc<Tag<StringOfMaxSize256_> > >; TSetSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<unsigned int, Alloc<> >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, int>, unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:336:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, Tag<Pack_> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:361:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned char, BitPacked<24, 8> >, Tuple<unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<SmallDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<SmallDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<SmallDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:374:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned char, seqan::BitPacked<24, 8> >; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, int>, unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int> > >; TNameInput = Pool<Pair<unsigned int, unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<unsigned int, unsigned int, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, int>, unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<unsigned int, Tuple<unsigned int, 3, void>, Tuple<unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 3, void>, seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 3, void>; T3 = seqan::Tuple<unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<unsigned int, Tuple<unsigned int, 2, void>, Tuple<unsigned int, 2, void>, Tag<Pack_> >, unsigned int>, unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, unsigned int>, unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TSpec = IndexSa<Tag<HugeDb_> >; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<Tag<StringOfMaxSize256_> > >, Owner<ConcatDirect<> > >; TIndexSpec = Tag<HugeDb_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/finder.h:605:23:   required from 'void execute(DbFinder<TText, TIndex, TDbQuerySpec, TDelegate, seqan::Tag<seqan::Parallel_> >&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TDbQuerySpec = void; TDelegate = Writer<Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, Db<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, void>, seqan::Tag<Join_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:286:12:   required from 'int runJoiner(Options&, const TText&, const TIndex&, TSpec) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<seqan::Tag<StringOfMaxSize256_> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexSa<seqan::Tag<HugeDb_> > >; TSpec = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/join.cpp:323:41:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<unsigned int, seqan::Tuple<unsigned int, 2, void>, seqan::Tuple<unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = unsigned int; T2 = seqan::Tuple<unsigned int, 2, void>; T3 = seqan::Tuple<unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[  3%] Linking CXX executable ../../bin/s4_search
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin && /usr/bin/cmake -E cmake_link_script CMakeFiles/s4_search.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/s4_search.dir/search.cpp.o -o ../../bin/s4_search  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target s4_search
make  -f apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build.make apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqan_tcoffee /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build.make apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqan_tcoffee && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.13.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o -MF CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o.d -o CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:37,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:23:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:22:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  3%] Linking CXX executable ../../bin/s4_join
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin && /usr/bin/cmake -E cmake_link_script CMakeFiles/s4_join.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/s4_join.dir/join.cpp.o -o ../../bin/s4_join  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target s4_join
make  -f apps/seqcons2/CMakeFiles/seqcons2.dir/build.make apps/seqcons2/CMakeFiles/seqcons2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2/CMakeFiles/seqcons2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/seqcons2/CMakeFiles/seqcons2.dir/build.make apps/seqcons2/CMakeFiles/seqcons2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons.cpp.o -MF CMakeFiles/seqcons2.dir/seqcons.cpp.o.d -o CMakeFiles/seqcons2.dir/seqcons.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/stdexcept:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, long unsigned int, Tag<Default_> > >; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = long unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, long unsigned int, Tag<Default_> > >; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:191:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, Graph<Alignment<TStringSet, TCargo, TSpec2> >&, FrequencyCounting) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TStringSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = long unsigned int; TSpec = Tag<Default_>; FrequencyCounting = const Tag<FrequencyCounting_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:178:24:   required from 'void seqan::evaluateAlignment(const MsaOptions<TAlphabet, TScore>&) [with TAlphabet = SimpleType<unsigned char, Dna5_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:281:26:   required from 'void _initMsaParams(seqan::ArgumentParser&, TScore&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:305:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:46:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:66:19:   required from 'void customizedMsaAlignment(const seqan::MsaOptions<TAlphabet, TScore>&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:290:31:   required from 'void _initMsaParams(seqan::ArgumentParser&, TScore&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:305:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:46:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:66:19:   required from 'void customizedMsaAlignment(const seqan::MsaOptions<TAlphabet, TScore>&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:290:31:   required from 'void _initMsaParams(seqan::ArgumentParser&, TScore&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:305:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:46:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:66:19:   required from 'void customizedMsaAlignment(const seqan::MsaOptions<TAlphabet, TScore>&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:290:31:   required from 'void _initMsaParams(seqan::ArgumentParser&, TScore&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:305:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:46:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:66:19:   required from 'void customizedMsaAlignment(const seqan::MsaOptions<TAlphabet, TScore>&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:290:31:   required from 'void _initMsaParams(seqan::ArgumentParser&, TScore&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:305:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:46:14:   required from 'bool _loadSequences(TSeqSet&, TNameSet&, const char*) [with TSeqSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >; TNameSet = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:66:19:   required from 'void customizedMsaAlignment(const seqan::MsaOptions<TAlphabet, TScore>&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:290:31:   required from 'void _initMsaParams(seqan::ArgumentParser&, TScore&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/seqan_tcoffee.cpp:305:29:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[  3%] Building CXX object apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_app.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_app.cpp.o -MF CMakeFiles/seqcons2.dir/seqcons_app.cpp.o.d -o CMakeFiles/seqcons2.dir/seqcons_app.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/unique_ptr.h:37,
                 from /usr/include/c++/13/memory:78,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_fstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:145:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:116:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_fstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:145:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_fstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:145:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h: In instantiation of 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:404:32: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  404 |             for (TReadGapsIter itR2 = itR; itR2 != itREnd; ++itR2)
      |                                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:116:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_fstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:145:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_fstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:145:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:116:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:80:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:153:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:223:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:223:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:370:17:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Standard_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:395:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:98:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:811:66:   required from 'void seqan::_fillBamSeqAndQual(TSeq&, TQual&, const TRead&) [with TSeq = String<SimpleType<unsigned char, Iupac_>, Alloc<> >; TQual = String<char, Alloc<> >; TRead = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:31:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:153:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:223:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:969:48:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:280:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = unsigned int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:930:19:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::_endContig(unsigned int) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:697:5:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:572:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:153:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:80:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:153:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:932:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:941:46:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:136:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, FractionalScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; FractionalScore = const Tag<FractionalScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:272:24:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, const TScore&, ReScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; TScore = Score<int, Tag<Simple_> >; ReScore = const Tag<ReScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:384:24:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:295:23:   required from 'bool seqan::alignmentGraphToFragmentStore(TFragmentStore&, const Graph<Alignment<StringSet<TSequence, TSetSpec>, TCargo, TSpec> >&, const Graph<Undirected<double> >&, const String<unsigned int, Alloc<> >&, const String<unsigned int, Alloc<> >&, unsigned int, bool) [with TFragmentStore = FragmentStore<>; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TCargo = unsigned int; TSetSpec = Dependent<Tag<TagInsist_> >; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:427:34:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:572:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:153:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:56:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:513:15:   required from 'void seqan::insertGap(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >; TPosition = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1610:30:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_updateAlignments(unsigned int, unsigned int&, TProfileString&, seqan::Gaps<seqan::String<seqan::ProfileChar<typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type> > >&, seqan::Gaps<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>&, seqan::ExtractProfileInfo_&, const seqan::WindowClippingInfo_&, const TAlignedReadIter&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5_>; typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5Q_>; typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; typename TFragmentStore::TReadSeqStore = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TAlignedReadIter = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1321:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:261:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:17:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:261:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TValue2 = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Pigeonhole<>; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:463:41:   required from 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:370:17:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:296:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:382:27:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:639:20:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, const TAlgoTag&) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_app.cpp:314:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(TFile&, String<TRightValue, TRightSpec>&, String<TSize2, TSpec2>&, const TNames&, TCoffeeLib) [with TFile = std::basic_ifstream<char>; TFragment = Fragment<>; TSpec = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TNames = StringSet<String<char, Alloc<> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_io.h:209:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::read(TFile&, String<TRightValue, TRightSpec>&, String<TSize2, TSpec2>&, const TNames&, TCoffeeLib) [with TFile = std::basic_ifstream<char>; TFragment = Fragment<>; TSpec = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TNames = StringSet<String<char, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  3%] Building CXX object apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_options.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_options.cpp.o -MF CMakeFiles/seqcons2.dir/seqcons_options.cpp.o.d -o CMakeFiles/seqcons2.dir/seqcons_options.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_options.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_options.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_options.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/seqcons_options.h:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[  3%] Linking CXX executable ../../bin/seqcons2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/seqcons2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/seqcons2.dir/seqcons.cpp.o CMakeFiles/seqcons2.dir/seqcons_app.cpp.o CMakeFiles/seqcons2.dir/seqcons_options.cpp.o -o ../../bin/seqcons2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target seqcons2
make  -f apps/sgip/CMakeFiles/sgip.dir/build.make apps/sgip/CMakeFiles/sgip.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sgip /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sgip/CMakeFiles/sgip.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/sgip/CMakeFiles/sgip.dir/build.make apps/sgip/CMakeFiles/sgip.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/sgip/CMakeFiles/sgip.dir/sgip.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sgip && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.4.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/sgip/CMakeFiles/sgip.dir/sgip.cpp.o -MF CMakeFiles/sgip.dir/sgip.cpp.o.d -o CMakeFiles/sgip.dir/sgip.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/sgip.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/sgip.cpp:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/sgip.cpp:27:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/sgip_base.h:33,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/sgip.cpp:33:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[  3%] Linking CXX executable ../../bin/seqan_tcoffee
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqan_tcoffee && /usr/bin/cmake -E cmake_link_script CMakeFiles/seqan_tcoffee.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o -o ../../bin/seqan_tcoffee  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Built target seqan_tcoffee
make  -f apps/snp_store/CMakeFiles/snp_store.dir/build.make apps/snp_store/CMakeFiles/snp_store.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/snp_store /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/snp_store/CMakeFiles/snp_store.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/snp_store/CMakeFiles/snp_store.dir/build.make apps/snp_store/CMakeFiles/snp_store.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  3%] Building CXX object apps/snp_store/CMakeFiles/snp_store.dir/snp_store.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/snp_store && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/snp_store/CMakeFiles/snp_store.dir/snp_store.cpp.o -MF CMakeFiles/snp_store.dir/snp_store.cpp.o.d -o CMakeFiles/snp_store.dir/snp_store.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:32:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:31:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:33:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[  4%] Linking CXX executable ../../bin/sgip
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sgip && /usr/bin/cmake -E cmake_link_script CMakeFiles/sgip.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/sgip.dir/sgip.cpp.o -o ../../bin/sgip  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target sgip
make  -f apps/splazers/CMakeFiles/splazers.dir/build.make apps/splazers/CMakeFiles/splazers.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/splazers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/splazers/CMakeFiles/splazers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/splazers/CMakeFiles/splazers.dir/build.make apps/splazers/CMakeFiles/splazers.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object apps/splazers/CMakeFiles/splazers.dir/splazers.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/splazers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/splazers/CMakeFiles/splazers.dir/splazers.cpp.o -MF CMakeFiles/splazers.dir/splazers.cpp.o.d -o CMakeFiles/splazers.dir/splazers.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:28,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:53:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:356:23: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  356 |         public ::std::binary_function < typename Value<TMatches>::Type, typename Value<TMatchQualities>::Type, bool >
      |                       ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:405:39: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  405 |     struct LessPosLen : public ::std::binary_function < TPosLen, TPosLen, bool >
      |                                       ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:420:23: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  420 |         public ::std::binary_function < typename Value<TMatches>::Type, typename Value<TMatchQualities>::Type, bool >
      |                       ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:468:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  468 |     struct LessId : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:481:37: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  481 |     struct LessGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:504:40: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  504 |     struct LessGPosEnd : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                        ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:523:42: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  523 |     struct LessGPosEndOa : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                          ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:545:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  545 |     struct HigherQ : public ::std::binary_function < TQual, TQual, bool >
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:676:44: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  676 |         struct LessRNoGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:704:47: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  704 |         struct LessRNoGEndPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:730:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  730 |         struct LessErrors : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:748:41: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  748 | struct LessSplicedScore : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                         ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:770:45: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  770 | struct LessSplicedScoreGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:51:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/outputFormat.h:126:44: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  126 |         struct LessGPosRNo : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:54,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/pair_base.h: In instantiation of 'seqan::Pair<T1, T2, TSpec>::Pair(const T1&, const T2&) [with T1 = unsigned int; T2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:5148:46:   required from 'void seqan::dumpShortIndelPolymorphismsBatch(TFragmentStore&, TReadCigars&, TGenome&, TGenomeName, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, TFile&, TOptions&) [with TFragmentStore = FragmentStore<SnpStoreSpec_>; TReadCigars = StringSet<String<Pair<char, int> > >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGenomeName = String<char, Alloc<> >; TFile = std::basic_ofstream<char>; TOptions = SNPCallingOptions<>; typename TFragmentStore::TContigPos = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:971:74:   required from 'int detectSNPs(seqan::SNPCallingOptions<TSpec>&) [with TSpec = seqan::SNPCallingSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:1412:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/pair_base.h:120:53: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  120 |     Pair(T1 const & _i1, T2 const & _i2) : i1(_i1), i2(_i2) {}
      |                                                     ^~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:513:47: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  513 |         struct LessPairErrors : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:77:18:   required from 'bool loadGenomes(TGenomeSet&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, std::map<seqan::String<char, seqan::Alloc<> >, TGenomeSetSize>&, TGenomeNames&) [with TGenomeSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<> >; TGenomeSetSize = long unsigned int; TGenomeNames = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:670:56:   required from 'int detectSNPs(seqan::SNPCallingOptions<TSpec>&) [with TSpec = seqan::SNPCallingSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:1412:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:4057:36:   required from 'void seqan::dumpVariantsRealignBatch(TFragmentStore&, TReadCigars&, const TReadCounts&, TGenomeName, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, TFile&, TFile&, TOptions&) [with TFragmentStore = FragmentStore<SnpStoreSpec_>; TReadCounts = String<unsigned int, Alloc<> >; TReadCigars = StringSet<String<Pair<char, int> > >; TGenomeName = String<char, Alloc<> >; TFile = std::basic_ofstream<char>; TOptions = SNPCallingOptions<>; typename TFragmentStore::TContigPos = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:2477:41:   required from 'void seqan::dumpVariantsRealignBatchWrap(TFragmentStore&, TReadCigars&, const TReadCounts&, TGenomeName, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, TFile&, TFile&, TOptions&) [with TFragmentStore = FragmentStore<SnpStoreSpec_>; TReadCigars = StringSet<String<Pair<char, int> > >; TReadCounts = String<unsigned int, Alloc<> >; TGenomeName = String<char, Alloc<> >; TFile = std::basic_ofstream<char>; TOptions = SNPCallingOptions<>; typename TFragmentStore::TContigPos = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:986:53:   required from 'int detectSNPs(seqan::SNPCallingOptions<TSpec>&) [with TSpec = seqan::SNPCallingSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:1412:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:77:18:   required from 'bool loadGenomes(TGenomeSet&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, std::map<seqan::String<char, seqan::Alloc<> >, TGenomeSetSize>&, TGenomeNames&) [with TGenomeSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<> >; TGenomeSetSize = long unsigned int; TGenomeNames = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:670:56:   required from 'int detectSNPs(seqan::SNPCallingOptions<TSpec>&) [with TSpec = seqan::SNPCallingSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:1412:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = const Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:689:35:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TExpand> >::Type seqan::iter(const T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<const T, const Tag<TExpand> >::Type = Iter<const Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:669:16:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(const T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<const Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:451:22:   required from 'bool seqan::isGap(const Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:4418:72:   required from 'void seqan::dumpVariantsRealignBatch(TFragmentStore&, TReadCigars&, const TReadCounts&, TGenomeName, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, TFile&, TFile&, TOptions&) [with TFragmentStore = FragmentStore<SnpStoreSpec_>; TReadCounts = String<unsigned int, Alloc<> >; TReadCigars = StringSet<String<Pair<char, int> > >; TGenomeName = String<char, Alloc<> >; TFile = std::basic_ofstream<char>; TOptions = SNPCallingOptions<>; typename TFragmentStore::TContigPos = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.h:2477:41:   required from 'void seqan::dumpVariantsRealignBatchWrap(TFragmentStore&, TReadCigars&, const TReadCounts&, TGenomeName, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, TFile&, TFile&, TOptions&) [with TFragmentStore = FragmentStore<SnpStoreSpec_>; TReadCigars = StringSet<String<Pair<char, int> > >; TReadCounts = String<unsigned int, Alloc<> >; TGenomeName = String<char, Alloc<> >; TFile = std::basic_ofstream<char>; TOptions = SNPCallingOptions<>; typename TFragmentStore::TContigPos = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:986:53:   required from 'int detectSNPs(seqan::SNPCallingOptions<TSpec>&) [with TSpec = seqan::SNPCallingSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:1412:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:77:18:   required from 'bool loadGenomes(TGenomeSet&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, std::map<seqan::String<char, seqan::Alloc<> >, TGenomeSetSize>&, TGenomeNames&) [with TGenomeSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<> >; TGenomeSetSize = long unsigned int; TGenomeNames = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:670:56:   required from 'int detectSNPs(seqan::SNPCallingOptions<TSpec>&) [with TSpec = seqan::SNPCallingSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:1412:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:77:18:   required from 'bool loadGenomes(TGenomeSet&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, std::map<seqan::String<char, seqan::Alloc<> >, TGenomeSetSize>&, TGenomeNames&) [with TGenomeSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<> >; TGenomeSetSize = long unsigned int; TGenomeNames = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:670:56:   required from 'int detectSNPs(seqan::SNPCallingOptions<TSpec>&) [with TSpec = seqan::SNPCallingSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:1412:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:77:18:   required from 'bool loadGenomes(TGenomeSet&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, std::map<seqan::String<char, seqan::Alloc<> >, TGenomeSetSize>&, TGenomeNames&) [with TGenomeSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<> >; TGenomeSetSize = long unsigned int; TGenomeNames = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:670:56:   required from 'int detectSNPs(seqan::SNPCallingOptions<TSpec>&) [with TSpec = seqan::SNPCallingSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/snp_store.cpp:1412:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/outputFormat.h:1591:40:   required from 'void seqan::dumpMatches(TMatches&, const TGenomeNames&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReads&, const TReadRegions&, TCounts&, const TReadNames&, CharString, CharString, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenomeNames = StringSet<String<char, Alloc<> > >; TReads = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >; TReadNames = StringSet<String<char, Alloc<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:281:14:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h: In instantiation of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal, TSufPrefSpec) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; TSufPrefSpec = LongestSuffix; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2543:21:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:666:22: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  666 |         TGenomeInfix oriInf = inf;
      |                      ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:674:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  674 |         TGenomeInfixRev         infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h: In instantiation of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal, TSufPrefSpec) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; TSufPrefSpec = LongestPrefix; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2591:20:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:666:22: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  666 |         TGenomeInfix oriInf = inf;
      |                      ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:674:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  674 |         TGenomeInfixRev         infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h: In instantiation of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:763:21:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2195:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:1430:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1430 |         TGenomeInfixRev         infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h: In instantiation of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:1658:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:1979:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2125:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2195:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:1430:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1430 |         TGenomeInfixRev         infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/outputFormat.h:1591:40:   required from 'void seqan::dumpMatches(TMatches&, const TGenomeNames&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReads&, const TReadRegions&, TCounts&, const TReadNames&, CharString, CharString, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenomeNames = StringSet<String<char, Alloc<> > >; TReads = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >; TReadNames = StringSet<String<char, Alloc<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:281:14:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna5Q_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = VirtualStream<char, Tag<Output_> >; THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/outputFormat.h:900:12:   required from 'void seqan::dumpMatches(TMatches&, const TGenomeNames&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReads&, const TReadRegions&, TCounts&, const TReadNames&, CharString, CharString, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenomeNames = StringSet<String<char, Alloc<> > >; TReads = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >; TReadNames = StringSet<String<char, Alloc<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:281:14:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:98:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_> >, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna5Q_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = VirtualStream<char, Tag<Output_> >; THost = ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TSpec = Tag<ModReverse_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/outputFormat.h:1591:14:   required from 'void seqan::dumpMatches(TMatches&, const TGenomeNames&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReads&, const TReadRegions&, TCounts&, const TReadNames&, CharString, CharString, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenomeNames = StringSet<String<char, Alloc<> > >; TReads = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >; TReadNames = StringSet<String<char, Alloc<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:281:14:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:604:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:395:32:   required from 'seqan::Finder<THaystack, seqan::Swift<TSpec> >::Finder(THaystack&, TRepeatSize, TPeriodSize) [with TRepeatSize = int; TPeriodSize = int; THaystack = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2419:16:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3039:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1928:77:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3039:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:222:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3041:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3043:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1928:77:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:674:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal, TSufPrefSpec) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; TSufPrefSpec = LongestSuffix; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2543:21:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3074:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3076:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:395:32:   required from 'seqan::Finder<THaystack, seqan::Swift<TSpec> >::Finder(THaystack&, TRepeatSize, TPeriodSize) [with TRepeatSize = int; TPeriodSize = int; THaystack = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::SwiftSemiGlobal_<seqan::Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:671:16:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2184:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1928:77:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2184:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2187:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2190:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1928:77:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2195:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:1430:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:763:21:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2195:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2198:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2201:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1866:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3039:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1876:41:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3039:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(const Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:910:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<const TObject>::Type>::Type seqan::haystack(const TObject&) [with TObject = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; typename Parameter_<typename Haystack<const TObject>::Type>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Haystack<const TObject>::Type = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1682:38:   required from 'seqan::Pair<typename seqan::Position<seqan::Finder<THaystack, seqan::Swift<TSpec> > >::Type> seqan::positionRange(const Finder<THaystack, Swift<TSpec> >&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; typename Position<Finder<THaystack, Swift<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1693:25:   required from 'seqan::Pair<typename seqan::Position<seqan::Finder<THaystack, seqan::Swift<TSpec> > >::Type> seqan::positionRange(Finder<THaystack, Swift<TSpec> >&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; typename Position<Finder<THaystack, Swift<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2489:26:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3039:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:606:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  606 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1866:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(const Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:910:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<const TObject>::Type>::Type seqan::haystack(const TObject&) [with TObject = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; typename Parameter_<typename Haystack<const TObject>::Type>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Haystack<const TObject>::Type = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1682:38:   required from 'seqan::Pair<typename seqan::Position<seqan::Finder<THaystack, seqan::Swift<TSpec> > >::Type> seqan::positionRange(const Finder<THaystack, Swift<TSpec> >&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Tag<SwiftSemiGlobal_<void> >; typename Position<Finder<THaystack, Swift<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1693:25:   required from 'seqan::Pair<typename seqan::Position<seqan::Finder<THaystack, seqan::Swift<TSpec> > >::Type> seqan::positionRange(Finder<THaystack, Swift<TSpec> >&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Tag<SwiftSemiGlobal_<void> >; typename Position<Finder<THaystack, Swift<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2489:26:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:606:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  606 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:675:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal, TSufPrefSpec) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; TSufPrefSpec = LongestSuffix; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2543:21:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1866:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2184:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1876:41:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2184:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1845:48:   required from 'bool seqan::_nextNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1965:37:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2184:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1866:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2195:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:1432:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:763:21:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2195:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:663:20:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::end(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_> >, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna5Q_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = VirtualStream<char, Tag<Output_> >; THost = ModifiedString<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TSpec = Tag<ModReverse_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/outputFormat.h:1591:14:   required from 'void seqan::dumpMatches(TMatches&, const TGenomeNames&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReads&, const TReadRegions&, TCounts&, const TReadNames&, CharString, CharString, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenomeNames = StringSet<String<char, Alloc<> > >; TReads = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >; TReadNames = StringSet<String<char, Alloc<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:281:14:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TValue2 = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2383:33:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3039:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TValue2 = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2384:33:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3041:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSource = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TValue2 = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2384:33:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3043:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Owner<> >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = void; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:652:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal, TSufPrefSpec) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; TSufPrefSpec = LongestSuffix; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2543:21:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:469:24:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:675:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal, TSufPrefSpec) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; TSufPrefSpec = LongestSuffix; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2543:21:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:1717:14:   required from 'bool seqan::combineLeftRight(TMatch&, TMatch&, TRead&, TGenome&, RazerSOptions<TSpec>&, char, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TRead = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2701:25:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:652:32:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2184:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:652:32:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2187:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:652:32:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2190:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = void; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = FindInfix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:1414:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:763:21:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2195:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:469:24:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:1432:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:763:21:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2195:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1845:33:   required from 'bool seqan::_nextNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1965:37:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2454:13:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3039:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:21:   required from 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = void; typename Parameter_<T>::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:688:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal, TSufPrefSpec) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; TSufPrefSpec = LongestSuffix; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2543:21:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1845:33:   required from 'bool seqan::_nextNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1965:37:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:705:13:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2184:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:21:   required from 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = void; typename Parameter_<T>::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:1437:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:763:21:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2195:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2701:25:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2701:25:   required from 'void seqan::mapSplicedReads(TMatches&, TGenome&, unsigned int, TOriReadSet&, TReadRegions&, Pattern<TReadIndexL, Swift<TSwiftSpec> >&, Pattern<TReadIndexR, Swift<TSwiftSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TOriReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TReadIndexL = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TReadIndexR = Index<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:2237:20:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet_&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&, const TShapeL&, const TShapeR&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShapeL = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TShapeR = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_spliced.h:3072:27:   required from 'int seqan::mapSplicedReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2169:31:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_wotd.h:259:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:671:16:   required from 'void seqan::mapMatePairReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers_matepairs.h:1028:21:   required from 'int seqan::mapMatePairReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet_&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet_ = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2122:26:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/razers.h:2184:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TReadRegions&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TReadRegions = String<Pair<unsigned int, Pair<unsigned int, long int, BitPacked<2, 64> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:250:22:   required from 'int mapReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString&, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/splazers.cpp:717:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:277:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  4%] Linking CXX executable ../../bin/snp_store
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/snp_store && /usr/bin/cmake -E cmake_link_script CMakeFiles/snp_store.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/snp_store.dir/snp_store.cpp.o -o ../../bin/snp_store  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target snp_store
make  -f apps/stellar/CMakeFiles/stellar.dir/build.make apps/stellar/CMakeFiles/stellar.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/stellar /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/stellar/CMakeFiles/stellar.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/stellar/CMakeFiles/stellar.dir/build.make apps/stellar/CMakeFiles/stellar.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object apps/stellar/CMakeFiles/stellar.dir/stellar.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/stellar && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.4.11\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/stellar/CMakeFiles/stellar.dir/stellar.cpp.o -MF CMakeFiles/stellar.dir/stellar.cpp.o.d -o CMakeFiles/stellar.dir/stellar.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:24:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:25:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:30,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:28:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_types.h:155:32: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  155 | struct LessPos : public ::std::binary_function <TMatch, TMatch, bool> {
      |                                ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_types.h:207:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  207 | struct LessLength : public ::std::binary_function <TMatch, TMatch, bool> {
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:127:18: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |     public::std::unary_function<AminoAcid, AminoAcid>
      |                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBestLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:60:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobalExtend_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:68:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBestLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:60:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobalExtend_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:68:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBestLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:60:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobalExtend_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:68:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBestLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:60:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobalExtend_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:68:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBestLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:60:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobalExtend_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:68:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBestLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:60:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobalExtend_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:68:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:241:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:618:26:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:103:29:   required from 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:33:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:194:24: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  194 |                 TAlign ali(align);
      |                        ^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:103:29:   required from 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:33:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:194:24: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  194 |                 TAlign ali(align);
      |                        ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Rna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:103:29:   required from 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:33:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:194:24: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  194 |                 TAlign ali(align);
      |                        ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Rna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:103:29:   required from 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:33:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:194:24: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  194 |                 TAlign ali(align);
      |                        ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:103:29:   required from 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:33:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:194:24: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  194 |                 TAlign ali(align);
      |                        ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:103:29:   required from 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:677:33:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h: In instantiation of 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:194:24: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  194 |                 TAlign ali(align);
      |                        ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:241:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:618:26:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_smart_pointer.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_allocator.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Parameter_<const T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:202:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(const Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:577:88:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Parameter_<const T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:202:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(const Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:577:88:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; typename Parameter_<const T>::Type = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:202:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(const Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:577:88:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; typename Parameter_<const T>::Type = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:202:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(const Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:577:88:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Parameter_<const T>::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:202:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(const Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:577:88:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Parameter_<const T>::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:202:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(const Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<char, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:577:88:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:241:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:618:26:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:195:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:773:28:   required from 'void integrateAlign(seqan::Align<TSource, TSpec>&, const seqan::Align<seqan::Segment<seqan::Segment<THost_, seqan::InfixSegment>, seqan::InfixSegment>, TSpec2>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec1 = seqan::Tag<seqan::ArrayGaps_>; TSpec2 = seqan::Tag<seqan::ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:467:16:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:195:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:773:28:   required from 'void integrateAlign(seqan::Align<TSource, TSpec>&, const seqan::Align<seqan::Segment<seqan::Segment<THost_, seqan::InfixSegment>, seqan::InfixSegment>, TSpec2>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec1 = seqan::Tag<seqan::ArrayGaps_>; TSpec2 = seqan::Tag<seqan::ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:467:16:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:195:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:773:28:   required from 'void integrateAlign(seqan::Align<TSource, TSpec>&, const seqan::Align<seqan::Segment<seqan::Segment<THost_, seqan::InfixSegment>, seqan::InfixSegment>, TSpec2>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TSpec1 = seqan::Tag<seqan::ArrayGaps_>; TSpec2 = seqan::Tag<seqan::ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:467:16:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:195:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:773:28:   required from 'void integrateAlign(seqan::Align<TSource, TSpec>&, const seqan::Align<seqan::Segment<seqan::Segment<THost_, seqan::InfixSegment>, seqan::InfixSegment>, TSpec2>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TSpec1 = seqan::Tag<seqan::ArrayGaps_>; TSpec2 = seqan::Tag<seqan::ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:467:16:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:195:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:773:28:   required from 'void integrateAlign(seqan::Align<TSource, TSpec>&, const seqan::Align<seqan::Segment<seqan::Segment<THost_, seqan::InfixSegment>, seqan::InfixSegment>, TSpec2>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec1 = seqan::Tag<seqan::ArrayGaps_>; TSpec2 = seqan::Tag<seqan::ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:467:16:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:195:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<char, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:773:28:   required from 'void integrateAlign(seqan::Align<TSource, TSpec>&, const seqan::Align<seqan::Segment<seqan::Segment<THost_, seqan::InfixSegment>, seqan::InfixSegment>, TSpec2>&) [with TSource = seqan::String<char, seqan::Alloc<> >; TSpec1 = seqan::Tag<seqan::ArrayGaps_>; TSpec2 = seqan::Tag<seqan::ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:467:16:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:241:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:618:26:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:190:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:121:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:607:30:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:121:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:607:30:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:121:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:607:30:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:121:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:607:30:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:121:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:607:30:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:121:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:607:30:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:241:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:618:26:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:395:16:   required from 'typename seqan::Needle<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::needle(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Needle<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:687:78:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::UngappedShape<0>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:395:16:   required from 'typename seqan::Needle<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::needle(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Needle<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:687:78:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::UngappedShape<0>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:395:16:   required from 'typename seqan::Needle<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::needle(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Needle<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Rna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:687:78:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::UngappedShape<0>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:395:16:   required from 'typename seqan::Needle<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::needle(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Needle<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:687:78:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::UngappedShape<0>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:395:16:   required from 'typename seqan::Needle<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::needle(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Needle<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:687:78:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::UngappedShape<0>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:395:16:   required from 'typename seqan::Needle<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::needle(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Needle<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:687:78:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::UngappedShape<0>]'
  143 |         Index(Index const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>*; TParam = const Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<Tristate_> >; TValue = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Value<TContext>::Type = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TValue2 = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:604:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   required from 'void _fillMatrixBestEndsLeft(TMatrix&, seqan::String<TValue>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, TSeed&, TSeed&, const TScore&) [with TMatrix = seqan::String<seqan::SimpleType<unsigned char, seqan::TraceBack_> >; TPossEnd = ExtensionEndPosition<long unsigned int>; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:697:26:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>*; TParam = const Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<Tristate_> >; TValue = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Value<TContext>::Type = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TValue2 = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:604:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   required from 'void _fillMatrixBestEndsLeft(TMatrix&, seqan::String<TValue>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, TSeed&, TSeed&, const TScore&) [with TMatrix = seqan::String<seqan::SimpleType<unsigned char, seqan::TraceBack_> >; TPossEnd = ExtensionEndPosition<long unsigned int>; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:697:26:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>*; TParam = const Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<Tristate_> >; TValue = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Value<TContext>::Type = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TValue2 = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:604:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   required from 'void _fillMatrixBestEndsLeft(TMatrix&, seqan::String<TValue>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, TSeed&, TSeed&, const TScore&) [with TMatrix = seqan::String<seqan::SimpleType<unsigned char, seqan::TraceBack_> >; TPossEnd = ExtensionEndPosition<long unsigned int>; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:697:26:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Rna_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Rna_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Rna_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>*; TParam = const Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<Tristate_> >; TValue = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Value<TContext>::Type = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TValue2 = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:604:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   required from 'void _fillMatrixBestEndsLeft(TMatrix&, seqan::String<TValue>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, TSeed&, TSeed&, const TScore&) [with TMatrix = seqan::String<seqan::SimpleType<unsigned char, seqan::TraceBack_> >; TPossEnd = ExtensionEndPosition<long unsigned int>; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:697:26:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Rna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Rna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Rna5_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>*; TParam = const Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<Tristate_> >; TValue = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Value<TContext>::Type = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TValue2 = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:604:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   required from 'void _fillMatrixBestEndsLeft(TMatrix&, seqan::String<TValue>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, TSeed&, TSeed&, const TScore&) [with TMatrix = seqan::String<seqan::SimpleType<unsigned char, seqan::TraceBack_> >; TPossEnd = ExtensionEndPosition<long unsigned int>; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:697:26:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>*; TParam = const Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, Tag<Tristate_> >; TValue = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; typename Value<TContext>::Type = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TValue2 = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:604:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<char, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<char, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<char, Alloc<> >, InfixSegment>; TString2 = Segment<String<char, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<char, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   required from 'void _fillMatrixBestEndsLeft(TMatrix&, seqan::String<TValue>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, TSeed&, TSeed&, const TScore&) [with TMatrix = seqan::String<seqan::SimpleType<unsigned char, seqan::TraceBack_> >; TPossEnd = ExtensionEndPosition<long unsigned int>; TSequence = seqan::String<char, seqan::Alloc<> >; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:697:26:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Rna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:685:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:687:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Rna_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:689:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Rna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, Rna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::Rna5_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:691:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:693:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<char, Alloc<> >, InfixSegment>*; TParam = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<char, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<char, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<char, Alloc<> >, InfixSegment>; TString2 = Segment<String<char, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<char, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<char, Alloc<> >, InfixSegment>*; TParam = const Segment<String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<char, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<char, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<char, Alloc<> >, InfixSegment>; TString2 = Segment<String<char, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<char, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar_extension.h:396:13:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:56:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<char, Alloc<> >, InfixSegment>, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:458:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, BandedGlobal) [with TInfix = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; BandedGlobal = const seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<char, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyBandedGlobal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:64:16:   required from 'bool _stellarOnOne(TSequence&, TId&, TPattern&, bool, TMatches&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TPattern = seqan::Pattern<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<char, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:174:31:   required from 'bool _stellarOnAll(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, StellarOptions&) [with TSequence = seqan::String<char, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:655:23:   required from 'int mainWithOptions(TOptions&, seqan::String<TValue>) [with TOptions = StellarOptions; TAlphabet = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/stellar.cpp:695:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  4%] Linking CXX executable ../../bin/splazers
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/splazers && /usr/bin/cmake -E cmake_link_script CMakeFiles/splazers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/splazers.dir/splazers.cpp.o -o ../../bin/splazers  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target splazers
make  -f apps/tree_recon/CMakeFiles/tree_recon.dir/build.make apps/tree_recon/CMakeFiles/tree_recon.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/tree_recon /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/tree_recon/CMakeFiles/tree_recon.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/tree_recon/CMakeFiles/tree_recon.dir/build.make apps/tree_recon/CMakeFiles/tree_recon.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object apps/tree_recon/CMakeFiles/tree_recon.dir/tree_recon.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/tree_recon && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.4.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/tree_recon/CMakeFiles/tree_recon.dir/tree_recon.cpp.o -MF CMakeFiles/tree_recon.dir/tree_recon.cpp.o.d -o CMakeFiles/tree_recon.dir/tree_recon.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tree_recon.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:37,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tree_recon.cpp:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tree_recon.cpp:18:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void readPhylipMatrix(TMat&, TNames&, TForwardIter&) [with TMat = seqan::String<double>; TNames = seqan::String<seqan::String<char, seqan::Alloc<> > >; TForwardIter = seqan::Iter<seqan::VirtualStream<char, seqan::Tag<seqan::Input_> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tree_recon.cpp:54:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void readPhylipMatrix(TMat&, TNames&, TForwardIter&) [with TMat = seqan::String<double>; TNames = seqan::String<seqan::String<char, seqan::Alloc<> > >; TForwardIter = seqan::Iter<seqan::VirtualStream<char, seqan::Tag<seqan::Input_> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  4%] Linking CXX executable ../../bin/tree_recon
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/tree_recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/tree_recon.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/tree_recon.dir/tree_recon.cpp.o -o ../../bin/tree_recon  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target tree_recon
make  -f apps/yara/CMakeFiles/yara_indexer.dir/build.make apps/yara/CMakeFiles/yara_indexer.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara/CMakeFiles/yara_indexer.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/yara/CMakeFiles/yara_indexer.dir/build.make apps/yara/CMakeFiles/yara_indexer.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object apps/yara/CMakeFiles/yara_indexer.dir/indexer.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.9.11\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DYARA_LARGE_CONTIGS=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/yara/CMakeFiles/yara_indexer.dir/indexer.cpp.o -MF CMakeFiles/yara_indexer.dir/indexer.cpp.o.d -o CMakeFiles/yara_indexer.dir/indexer.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:48:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/store_seqs.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/store_seqs.h:209:34:   required from 'void trimSeqNames(SeqStore<TSpec, TConfig>&) [with TSpec = void; TConfig = YaraContigsConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:201:21:   required from 'void loadContigs(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:357:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:195:14:   required from 'void loadContigs(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:357:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:195:14:   required from 'void loadContigs(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:357:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/store_seqs.h:209:34:   required from 'void trimSeqNames(SeqStore<TSpec, TConfig>&) [with TSpec = void; TConfig = YaraContigsConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:201:21:   required from 'void loadContigs(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:357:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:195:14:   required from 'void loadContigs(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:357:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:195:14:   required from 'void loadContigs(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:357:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:195:14:   required from 'void loadContigs(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:357:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned char, unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, Alloc<> > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<unsigned char, unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, Alloc<> > > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned char, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, Alloc<> > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<unsigned char, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, Alloc<> > > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<short unsigned int, unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, Alloc<> > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<short unsigned int, unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, Alloc<> > > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, Alloc<> > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, Alloc<> > > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, Alloc<> > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<unsigned int, unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, Alloc<> > > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, Alloc<> > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, Alloc<> > > > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned char, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned char, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<short unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<short unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = short unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:337:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<short unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned int, long unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:321:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:342:28:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > > >, seqan::FMIndex<void, YaraFMConfig<unsigned char, unsigned int, unsigned int, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:267:53:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:303:55:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:316:42:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TContigsSize = unsigned char; TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:333:27:   required from 'void saveIndex(YaraIndexer<TSpec, TConfig>&) [with TSpec = void; TConfig = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/indexer.cpp:360:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[  4%] Linking CXX executable ../../bin/stellar
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/stellar && /usr/bin/cmake -E cmake_link_script CMakeFiles/stellar.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/stellar.dir/stellar.cpp.o -o ../../bin/stellar  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target stellar
make  -f apps/yara/CMakeFiles/yara_mapper.dir/build.make apps/yara/CMakeFiles/yara_mapper.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara/CMakeFiles/yara_mapper.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/yara/CMakeFiles/yara_mapper.dir/build.make apps/yara/CMakeFiles/yara_mapper.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object apps/yara/CMakeFiles/yara_mapper.dir/mapper.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.9.11\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DYARA_LARGE_CONTIGS=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/yara/CMakeFiles/yara_mapper.dir/mapper.cpp.o -MF CMakeFiles/yara_mapper.dir/mapper.cpp.o.d -o CMakeFiles/yara_mapper.dir/mapper.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/random:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:51:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/store_seqs.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:69:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In function 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&)':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_function.h:1438:
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1267:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:946:46: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = greater<unsigned int>; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  946 |         removeIf(libraryLengths, std::bind2nd(std::greater<unsigned>(), 6.0 * libraryMedian), typename TTraits::TThreading());
      |                                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:958:61: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus<float>; _Tp = float]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  958 |         transform(libraryDiffs, libraryLengths, std::bind2nd(std::minus<float>(), libraryMean), typename TTraits::TThreading());
      |                                                 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/backward/binders.h:172:5: note: declared here
  172 |     bind2nd(const _Operation& __fn, const _Tp& __x)
      |     ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:140:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h: In instantiation of 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1269:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, All) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; All = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Serial_>, seqan::Tag<PairedEnd_>, seqan::Tag<All_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TContigsSum = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Serial_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:425:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
 1109 |     setHost(me.matesSetByCoord, me.matesByCoord);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:294:94: note:   initializing argument 2 of 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
  294 | inline void setHost(StringSet<THost, Segment<TSpec> > & me, typename Parameter_<THost>::Type host)
      |                                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_smart_pointer.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_allocator.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:57:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<long unsigned int, Alloc<> >, InfixSegment>; typename Parameter_<const T>::Type = Segment<String<long unsigned int, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:205:36:   required from 'typename seqan::Parameter_<TPositions>::Type seqan::cargo(const ModifiedString<THost, ModPos<TPositions> >&) [with THost = String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >; TPositions = Segment<String<long unsigned int, Alloc<> >, InfixSegment>; typename Parameter_<TPositions>::Type = Segment<String<long unsigned int, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:309:23:   required from 'bool seqan::empty(const ModifiedString<THost, ModPos<TPositions> >&) [with THost = String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >; TPositions = Segment<String<long unsigned int, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:858:18:   required from 'void rankMatches(Mapper<TSpec, TConfig>&, const TReadSeqs&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1326:16:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<long unsigned int, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:296:30:   required from 'void seqan::setHost(StringSet<THost, Segment<TSpec> >&, typename Parameter_<TContainer>::Type) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<TContainer>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1109:12:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   required from 'void mapReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1405:17:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/file_prefetched.h:151:13:   required from 'bool seqan::open(PrefetchedFile<TFile, TRecords, Tag<Parallel_> >&, const char*) [with TFile = FormattedFile<Tag<TagFastq_>, Tag<Input_> >; TRecords = SeqStore<void, SeqConfig<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:408:14:   required from 'void _openReadsImpl(Mapper<TSpec, TConfig>&, SingleEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; SingleEnd = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:402:19:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>; TIterator = Iter<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, CountingIteratorImpl_<Tag<Nothing_> > >; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_algorithms.h:244:37:   required from 'void seqan::iterate(TContainer&, TFunctor, const Tag<TExpand>&, Parallel) [with TContainer = Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>; TFunctor = ReadsClassifier<void, MapperTraits<void, ReadMapperConfig<Tag<Parallel_>, Tag<SingleEnd_>, Tag<Strata_>, unsigned char, unsigned int, unsigned int, MMap<>, 3> > >; TIterTag = Rooted_; Parallel = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_classifier.h:114:12:   required from 'void _classifyReadsImpl(ReadsClassifier<TSpec, TConfig>&, Strata) [with TSpec = void; TConfig = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_classifier.h:76:27:   required from 'ReadsClassifier<TSpec, TConfig>::ReadsClassifier(TReadsContext&, THits&, const TSeeds&, const Options&) [with TSpec = void; TConfig = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TReadsContext = ReadsContext<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; THits = seqan::String<Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >, seqan::Alloc<> >; TSeeds = seqan::StringSet<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Segment<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:656:17:   required from 'void classifyReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1288:18:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>::Segment(const seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>; TIterator = seqan::Iter<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<unsigned char, unsigned int, unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<unsigned char, unsigned int, long unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<unsigned char, long unsigned int, unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned char, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<short unsigned int, unsigned int, unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, short unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = short unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:381:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<short unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<unsigned int, unsigned int, unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<unsigned int, unsigned int, long unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<unsigned int, long unsigned int, unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:279:31:   required from 'typename seqan::Parameter_<T>::Type seqan::host(StringSet<THost, Segment<TSpec> >&) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/bits_bucket.h:182:17:   required from 'void seqan::bucket(StringSet<THost, Segment<TSpec> >&, const TKeyGetter&, TMaxKey, const TThreading&) [with THost = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TSpec = Segment<String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, Alloc<> >, SuffixSegment>; TKeyGetter = Getter<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, const Tag<ReadId_> >; TMaxKey = long unsigned int; TThreading = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1110:11:   required from 'void _verifyMatchesImpl(Mapper<TSpec, TConfig>&, PairedEnd) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; PairedEnd = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1081:23:   required from 'void verifyMatches(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1328:22:   required from 'void _mapReadsImpl(Mapper<TSpec, TConfig>&, TReadSeqs&, Strata) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned int, long unsigned int, long unsigned int, seqan::MMap<>, 3>; TReadSeqs = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1237:18:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:351:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TContigsLen = long unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:365:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:386:34:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<Match<Limits<unsigned int, long unsigned int, long unsigned int> >, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/file_prefetched.h:151:13:   required from 'bool seqan::open(PrefetchedFile<TFile, TRecords, Tag<Parallel_> >&, const char*) [with TFile = FormattedFile<Tag<TagFastq_>, Tag<Input_> >; TRecords = SeqStore<void, SeqConfig<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:408:14:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>, AdaptorIterator<Iter<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>, AdaptorIterator<Iter<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>, AdaptorIterator<Iter<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_algorithms.h:244:24:   required from 'void seqan::iterate(TContainer&, TFunctor, const Tag<TExpand>&, Parallel) [with TContainer = Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>; TFunctor = ReadsClassifier<void, MapperTraits<void, ReadMapperConfig<Tag<Parallel_>, Tag<SingleEnd_>, Tag<Strata_>, unsigned char, unsigned int, unsigned int, MMap<>, 3> > >; TIterTag = Rooted_; Parallel = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_classifier.h:114:12:   required from 'void _classifyReadsImpl(ReadsClassifier<TSpec, TConfig>&, Strata) [with TSpec = void; TConfig = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_classifier.h:76:27:   required from 'ReadsClassifier<TSpec, TConfig>::ReadsClassifier(TReadsContext&, THits&, const TSeeds&, const Options&) [with TSpec = void; TConfig = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TReadsContext = ReadsContext<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; THits = seqan::String<Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >, seqan::Alloc<> >; TSeeds = seqan::StringSet<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Segment<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:656:17:   required from 'void classifyReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1288:18:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>::Segment(const seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>; TIterator = seqan::Iter<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/write_sam.h:114:14:   required from 'void seqan::write(TTarget&, const BamHeader&, const BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, const Sam&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TNameStore = StringSet<String<char, Alloc<> >, Owner<ConcatDirect<Limits<unsigned int> > > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> >, Owner<ConcatDirect<Limits<unsigned int> > > >, String<char, Alloc<> > >; TStorageSpec = Dependent<Tag<TagInsist_> >; BamHeader = String<BamHeaderRecord>; Sam = Tag<Sam_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:293:14:   required from 'void seqan::write(TTarget&, const BamHeader&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, const TagSelector<TTagList>&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TNameStore = StringSet<String<char, Alloc<> >, Owner<ConcatDirect<Limits<unsigned int> > > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> >, Owner<ConcatDirect<Limits<unsigned int> > > >, String<char, Alloc<> > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >; BamHeader = String<BamHeaderRecord>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:295:14:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/file_prefetched.h:151:13:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>; TIterator = seqan::Iter<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>; TIterator = Iter<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, CountingIteratorImpl_<Tag<Nothing_> > >; TSpec = Tag<Default_>; TIntegral = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_algorithms.h:244:37:   required from 'void seqan::iterate(TContainer&, TFunctor, const Tag<TExpand>&, Parallel) [with TContainer = Segment<const StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, PrefixSegment>; TFunctor = ReadsClassifier<void, MapperTraits<void, ReadMapperConfig<Tag<Parallel_>, Tag<SingleEnd_>, Tag<Strata_>, unsigned char, unsigned int, unsigned int, MMap<>, 3> > >; TIterTag = Rooted_; Parallel = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_classifier.h:114:12:   required from 'void _classifyReadsImpl(ReadsClassifier<TSpec, TConfig>&, Strata) [with TSpec = void; TConfig = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; Strata = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_classifier.h:76:27:   required from 'ReadsClassifier<TSpec, TConfig>::ReadsClassifier(TReadsContext&, THits&, const TSeeds&, const Options&) [with TSpec = void; TConfig = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TReadsContext = ReadsContext<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; THits = seqan::String<Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >, seqan::Alloc<> >; TSeeds = seqan::StringSet<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::Segment<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:656:17:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>::Segment(const seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<long unsigned int, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<long unsigned int, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:216:27:   required from 'void seqan::setCargo(ModifiedString<THost, ModPos<TPositions> >&, typename Parameter_<TPositions>::Type) [with THost = String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >; TPositions = Segment<String<long unsigned int, Alloc<> >, InfixSegment>; typename Parameter_<TPositions>::Type = Segment<String<long unsigned int, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:357:13:   required from 'typename seqan::Infix<seqan::ModifiedString<THost, seqan::ModPos<TPositions> > >::Type seqan::infix(ModifiedString<THost, ModPos<TPositions> >&, TPosBegin, TPosEnd) [with THost = String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >; TPositions = String<long unsigned int, Alloc<> >; TPosBegin = long unsigned int; TPosEnd = long unsigned int; typename Infix<ModifiedString<THost, ModPos<TPositions> > >::Type = ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<Segment<String<long unsigned int, Alloc<> >, InfixSegment> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:649:17:   required from 'typename seqan::Infix<T>::Type seqan::infixWithLength(T&&, TPosBegin, TSize) [with T = ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<String<long unsigned int, Alloc<> > > >; TPosBegin = long unsigned int; TSize = long unsigned int; typename Infix<T>::Type = ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<Segment<String<long unsigned int, Alloc<> >, InfixSegment> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_segment.h:489:27:   required from 'typename seqan::InfixOnValue<const THost>::Type seqan::value(const StringSet<THost, Segment<TSpec> >&, TPos) [with THost = ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<String<long unsigned int, Alloc<> > > >; TSpec = ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<String<long unsigned int, Alloc<> > > >; TPos = long unsigned int; typename InfixOnValue<const THost>::Type = const ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<Segment<String<long unsigned int, Alloc<> >, InfixSegment> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:215:17:   required from 'typename seqan::Reference<const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > > >::Type seqan::value(const Iter<TContainer, CountingIteratorImpl_<Tag<Nothing_> > >&) [with TContainer = const StringSet<ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<String<long unsigned int, Alloc<> > > >, Segment<ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<String<long unsigned int, Alloc<> > > >, InfixSegment> >; typename Reference<const Iter<TContainer, CountingIteratorImpl_<Tag<Nothing_> > > >::Type = const ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<Segment<String<long unsigned int, Alloc<> >, InfixSegment> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:885:53:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<long unsigned int, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1397:14:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h: In instantiation of 'void setQual(seqan::BamAlignmentRecord&, const TString&) [with TString = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:455:12:   required from 'void _fillReadSeqQual(MatchesWriter<TSpec, Traits>&, TReadSeqId) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TReadSeqId = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:305:21:   required from 'void _writeMappedRead(MatchesWriter<TSpec, Traits>&, TReadId, const TMatch&, SingleEnd) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TReadId = long unsigned int; TMatch = Match<Limits<unsigned char, unsigned int, unsigned int> >; SingleEnd = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:236:25:   required from 'void _writeMatchesImpl(MatchesWriter<TSpec, Traits>&, const TMatchIt&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TMatchIt = seqan::Iter<const seqan::ModifiedString<seqan::ModifiedString<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::ModPos<seqan::String<long unsigned int, seqan::Alloc<> > > >, seqan::ModPos<seqan::String<long unsigned int, seqan::Alloc<> > > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:102:26:   required from 'void MatchesWriter<TSpec, Traits>::operator()(const TIterator&) [with TIterator = seqan::Iter<const seqan::ModifiedString<seqan::ModifiedString<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::ModPos<seqan::String<long unsigned int, seqan::Alloc<> > > >, seqan::ModPos<seqan::String<long unsigned int, seqan::Alloc<> > > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_algorithms.h:248:14:   required from 'void seqan::iterate(TContainer&, TFunctor, const Tag<TExpand>&, Parallel) [with TContainer = const ModifiedString<ModifiedString<String<Match<Limits<unsigned char, unsigned int, unsigned int> >, Alloc<> >, ModPos<String<long unsigned int, Alloc<> > > >, ModPos<String<long unsigned int, Alloc<> > > >; TFunctor = MatchesWriter<void, MapperTraits<void, ReadMapperConfig<Tag<Parallel_>, Tag<SingleEnd_>, Tag<Strata_>, unsigned char, unsigned int, unsigned int, MMap<>, 3> > >; TIterTag = Standard_; Parallel = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:96:16:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:164:16: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  164 |     TQualities qual(string);
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::QualityExtractor<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:81:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h: In instantiation of 'bool _extendLeft(Extender<THaystack, TNeedle, seqan::Tag<seqan::LevenshteinDistance_>, TSpec>&, THaystackInfix&, TNeedleInfix&, THaystackPos&, TErrors&, TMaxErrors) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; THaystackInfix = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TNeedleInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TMaxErrors = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:413:25:   required from 'void extend(Extender<THaystack, TNeedle, TDistance, TSpec>&, const TNeedle&, THaystackPos, THaystackPos, TNeedlePos, TNeedlePos, TErrors, TMaxErrors, TDelegate&&) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TDistance = seqan::Tag<seqan::LevenshteinDistance_>; TSpec = void; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TNeedlePos = long unsigned int; TErrors = long unsigned int; TMaxErrors = long unsigned int; TDelegate = HitsExtender<void, MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:216:15:   required from 'void _extendHitImpl(HitsExtender<TSpec, Traits>&, const THitsIterator&, const TStrategy&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:112:23:   required from 'void HitsExtender<TSpec, Traits>::operator()(const THitsIterator&) [with THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_algorithms.h:248:14:   required from 'void seqan::iterate(TContainer&, TFunctor, const Tag<TExpand>&, Parallel) [with TContainer = const String<Hit<long unsigned int, Tag<HammingDistance_> >, Alloc<> >; TFunctor = HitsExtender<void, MapperTraits<void, ReadMapperConfig<Tag<Parallel_>, Tag<SingleEnd_>, Tag<All_>, unsigned char, unsigned int, unsigned int, MMap<>, 3> > >; TIterTag = Standard_; Parallel = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:134:12:   required from 'void _extendHitsImpl(HitsExtender<TSpec, Traits>&, const TStrategy&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:106:24:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:220:25: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  220 |         TNeedleInfixRev needleInfixRev(needleInfix);
      |                         ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:221:27: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  221 |         THaystackInfixRev haystackInfixRev(haystackInfix);
      |                           ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:241:21: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  241 |     TNeedleInfixRev needleInfixRev(needleInfix);
      |                     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:242:23: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  242 |     THaystackInfixRev haystackInfixRev(haystackInfix);
      |                       ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h: In instantiation of 'bool _extendRight(Extender<THaystack, TNeedle, seqan::Tag<seqan::LevenshteinDistance_>, TSpec>&, THaystackInfix&, TNeedleInfix&, THaystackPos&, TErrors&, TMaxErrors) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; THaystackInfix = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TNeedleInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TMaxErrors = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:429:26:   required from 'void extend(Extender<THaystack, TNeedle, TDistance, TSpec>&, const TNeedle&, THaystackPos, THaystackPos, TNeedlePos, TNeedlePos, TErrors, TMaxErrors, TDelegate&&) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TDistance = seqan::Tag<seqan::LevenshteinDistance_>; TSpec = void; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TNeedlePos = long unsigned int; TErrors = long unsigned int; TMaxErrors = long unsigned int; TDelegate = HitsExtender<void, MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:216:15:   required from 'void _extendHitImpl(HitsExtender<TSpec, Traits>&, const THitsIterator&, const TStrategy&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:112:23:   required from 'void HitsExtender<TSpec, Traits>::operator()(const THitsIterator&) [with THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_algorithms.h:248:14:   required from 'void seqan::iterate(TContainer&, TFunctor, const Tag<TExpand>&, Parallel) [with TContainer = const String<Hit<long unsigned int, Tag<HammingDistance_> >, Alloc<> >; TFunctor = HitsExtender<void, MapperTraits<void, ReadMapperConfig<Tag<Parallel_>, Tag<SingleEnd_>, Tag<All_>, unsigned char, unsigned int, unsigned int, MMap<>, 3> > >; TIterTag = Standard_; Parallel = Tag<Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:134:12:   required from 'void _extendHitsImpl(HitsExtender<TSpec, Traits>&, const TStrategy&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:106:24:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:311:20: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  311 |     THaystackInfix haystackPrefix(haystackInfix);
      |                    ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:312:18: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  312 |     TNeedleInfix needlePrefix(needleInfix);
      |                  ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/write_sam.h:114:14:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:402:19:   required from 'void openReads(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1397:14:   required from 'void runMapper(Mapper<TSpec, TConfig>&) [with TSpec = void; TConfig = ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.h:1432:14:   required from 'void spawnMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TContigsSum = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::QualityExtractor<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:164:16:   required from 'void setQual(seqan::BamAlignmentRecord&, const TString&) [with TString = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:455:12:   required from 'void _fillReadSeqQual(MatchesWriter<TSpec, Traits>&, TReadSeqId) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TReadSeqId = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:305:21:   required from 'void _writeMappedRead(MatchesWriter<TSpec, Traits>&, TReadId, const TMatch&, SingleEnd) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TReadId = long unsigned int; TMatch = Match<Limits<unsigned char, unsigned int, unsigned int> >; SingleEnd = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:236:25:   required from 'void _writeMatchesImpl(MatchesWriter<TSpec, Traits>&, const TMatchIt&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; TMatchIt = seqan::Iter<const seqan::ModifiedString<seqan::ModifiedString<seqan::String<Match<Limits<unsigned char, unsigned int, unsigned int> >, seqan::Alloc<> >, seqan::ModPos<seqan::String<long unsigned int, seqan::Alloc<> > > >, seqan::ModPos<seqan::String<long unsigned int, seqan::Alloc<> > > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_writer.h:102:26:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:220:25:   required from 'bool _extendLeft(Extender<THaystack, TNeedle, seqan::Tag<seqan::LevenshteinDistance_>, TSpec>&, THaystackInfix&, TNeedleInfix&, THaystackPos&, TErrors&, TMaxErrors) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; THaystackInfix = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TNeedleInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TMaxErrors = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:413:25:   required from 'void extend(Extender<THaystack, TNeedle, TDistance, TSpec>&, const TNeedle&, THaystackPos, THaystackPos, TNeedlePos, TNeedlePos, TErrors, TMaxErrors, TDelegate&&) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TDistance = seqan::Tag<seqan::LevenshteinDistance_>; TSpec = void; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TNeedlePos = long unsigned int; TErrors = long unsigned int; TMaxErrors = long unsigned int; TDelegate = HitsExtender<void, MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:216:15:   required from 'void _extendHitImpl(HitsExtender<TSpec, Traits>&, const THitsIterator&, const TStrategy&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:112:23:   required from 'void HitsExtender<TSpec, Traits>::operator()(const THitsIterator&) [with THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_algorithms.h:248:14:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:221:27:   required from 'bool _extendLeft(Extender<THaystack, TNeedle, seqan::Tag<seqan::LevenshteinDistance_>, TSpec>&, THaystackInfix&, TNeedleInfix&, THaystackPos&, TErrors&, TMaxErrors) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; THaystackInfix = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TNeedleInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TMaxErrors = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:413:25:   required from 'void extend(Extender<THaystack, TNeedle, TDistance, TSpec>&, const TNeedle&, THaystackPos, THaystackPos, TNeedlePos, TNeedlePos, TErrors, TMaxErrors, TDelegate&&) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TDistance = seqan::Tag<seqan::LevenshteinDistance_>; TSpec = void; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TNeedlePos = long unsigned int; TErrors = long unsigned int; TMaxErrors = long unsigned int; TDelegate = HitsExtender<void, MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:216:15:   required from 'void _extendHitImpl(HitsExtender<TSpec, Traits>&, const THitsIterator&, const TStrategy&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:112:23:   required from 'void HitsExtender<TSpec, Traits>::operator()(const THitsIterator&) [with THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parallel/parallel_algorithms.h:248:14:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Packed<seqan::MMap<> > >; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:243:17:   required from 'bool _extendLeft(Extender<THaystack, TNeedle, seqan::Tag<seqan::LevenshteinDistance_>, TSpec>&, THaystackInfix&, TNeedleInfix&, THaystackPos&, TErrors&, TMaxErrors) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; THaystackInfix = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TNeedleInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TMaxErrors = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:413:25:   required from 'void extend(Extender<THaystack, TNeedle, TDistance, TSpec>&, const TNeedle&, THaystackPos, THaystackPos, TNeedlePos, TNeedlePos, TErrors, TMaxErrors, TDelegate&&) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TDistance = seqan::Tag<seqan::LevenshteinDistance_>; TSpec = void; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TNeedlePos = long unsigned int; TErrors = long unsigned int; TMaxErrors = long unsigned int; TDelegate = HitsExtender<void, MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:216:15:   required from 'void _extendHitImpl(HitsExtender<TSpec, Traits>&, const THitsIterator&, const TStrategy&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:112:23:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:317:18:   required from 'bool _extendRight(Extender<THaystack, TNeedle, seqan::Tag<seqan::LevenshteinDistance_>, TSpec>&, THaystackInfix&, TNeedleInfix&, THaystackPos&, TErrors&, TMaxErrors) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; THaystackInfix = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TNeedleInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TMaxErrors = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:429:26:   required from 'void extend(Extender<THaystack, TNeedle, TDistance, TSpec>&, const TNeedle&, THaystackPos, THaystackPos, TNeedlePos, TNeedlePos, TErrors, TMaxErrors, TDelegate&&) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TDistance = seqan::Tag<seqan::LevenshteinDistance_>; TSpec = void; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TNeedlePos = long unsigned int; TErrors = long unsigned int; TMaxErrors = long unsigned int; TDelegate = HitsExtender<void, MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:216:15:   required from 'void _extendHitImpl(HitsExtender<TSpec, Traits>&, const THitsIterator&, const TStrategy&) [with TSpec = void; Traits = MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> >; THitsIterator = const Hit<long unsigned int, seqan::Tag<seqan::HammingDistance_> >*; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:112:23:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Packed<seqan::MMap<> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:469:24:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:243:17:   required from 'bool _extendLeft(Extender<THaystack, TNeedle, seqan::Tag<seqan::LevenshteinDistance_>, TSpec>&, THaystackInfix&, TNeedleInfix&, THaystackPos&, TErrors&, TMaxErrors) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; THaystackInfix = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TNeedleInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TMaxErrors = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:413:25:   required from 'void extend(Extender<THaystack, TNeedle, TDistance, TSpec>&, const TNeedle&, THaystackPos, THaystackPos, TNeedlePos, TNeedlePos, TErrors, TMaxErrors, TDelegate&&) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TDistance = seqan::Tag<seqan::LevenshteinDistance_>; TSpec = void; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TNeedlePos = long unsigned int; TErrors = long unsigned int; TMaxErrors = long unsigned int; TDelegate = HitsExtender<void, MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<SingleEnd_>, seqan::Tag<All_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_extender.h:216:15:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Packed<seqan::MMap<> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>*; TParam = const Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; typename Value<TContext>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TValue2 = const Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSource = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; THostValue = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TGapsSpecH = AnchorGaps<String<GapAnchor<int> > >; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecV = AnchorGaps<String<GapAnchor<int> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_aligner.h:146:27:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TIterator = Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TGapsSpecH = AnchorGaps<String<GapAnchor<int> > >; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecV = AnchorGaps<String<GapAnchor<int> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_aligner.h:146:27:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Packed<seqan::MMap<> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TIterator = Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TGapsSpecH = AnchorGaps<String<GapAnchor<int> > >; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecV = AnchorGaps<String<GapAnchor<int> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_aligner.h:146:27:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Packed<seqan::MMap<> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TIterator = Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:46:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TGapsSpecH = AnchorGaps<String<GapAnchor<int> > >; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapsSpecV = AnchorGaps<String<GapAnchor<int> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_aligner.h:146:27:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Packed<seqan::MMap<> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_interface.h:430:24:   required from 'void seqan::goEnd(TIterator&) [with TIterator = ModifiedIterator<Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:737:10:   required from 'void seqan::goEnd(Finder<THaystack, TSpec>&) [with THaystack = ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1537:18:   required from 'bool seqan::find(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TNeedle2 = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFinderCSP = NMatchesNone_; TPatternCSP = NMatchesNone_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1646:16:   required from 'bool seqan::find(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TNeedle2 = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = AlignTextBanded<FindPrefix, NMatchesNone_, NMatchesNone_>; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:246:16:   required from 'bool _extendLeft(Extender<THaystack, TNeedle, seqan::Tag<seqan::LevenshteinDistance_>, TSpec>&, THaystackInfix&, TNeedleInfix&, THaystackPos&, TErrors&, TMaxErrors) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; THaystackInfix = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TNeedleInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TMaxErrors = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:413:25:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSpec = void; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:989:66:   required from 'bool seqan::_patternInitSmallStateBanded(TFinder&, const TNeedle2&, PatternState_<TNeedle, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindPrefix; TFinderCSP = NMatchesNone_; TPatternCSP = NMatchesNone_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1181:44:   required from 'bool seqan::_stateInit(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindPrefix; TFinderCSP = NMatchesNone_; TPatternCSP = NMatchesNone_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1535:24:   required from 'bool seqan::find(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindPrefix; TFinderCSP = NMatchesNone_; TPatternCSP = NMatchesNone_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1646:16:   required from 'bool seqan::find(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AlignTextBanded<FindPrefix, NMatchesNone_, NMatchesNone_>; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:320:16:   required from 'bool _extendRight(Extender<THaystack, TNeedle, seqan::Tag<seqan::LevenshteinDistance_>, TSpec>&, THaystackInfix&, TNeedleInfix&, THaystackPos&, TErrors&, TMaxErrors) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; THaystackInfix = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TNeedleInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TMaxErrors = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:429:26:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:993:52:   required from 'void seqan::_computeHammingDistance(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:612:32:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:994:55:   required from 'void seqan::_computeHammingDistance(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:612:32:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:45:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Packed<seqan::MMap<> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, Packed<MMap<> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Packed<seqan::MMap<> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSeqHValue = SimpleType<unsigned char, Dna5_>; TSeqVValue = SimpleType<unsigned char, Dna5Q_>; TSeqVIterator = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<AffineGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPFinalColumn_>, Tag<PartialColumnTop_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:891:38:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_lexical.h:287:63:   required from 'void seqan::compare_(Lexical<TSpec>&, TLeft&, TRight&) [with TSpec = long unsigned int; TLeft = const ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >; TRight = const ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_lexical.h:323:13:   required from 'void seqan::compare(Lexical<TSpec>&, const TLeft&, const TRight&) [with TSpec = long unsigned int; TLeft = ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >; TRight = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_lexical.h:170:16:   required from 'seqan::Lexical<TSpec>::Lexical(const TLeft&, const TRight&) [with TLeft = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TRight = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_lexical.h:750:38:   required from 'typename seqan::Size<T>::Type seqan::lcpLength(const TLeft&, const TRight&) [with TLeft = ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >; TRight = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_extender.h:222:24:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_verifier.h:112:39:   required from 'void verify(Verifier<THaystack, TNeedle, seqan::Tag<seqan::AffineGaps_> >&, const TNeedle&, THaystackPos, THaystackPos, TErrors, TErrors, TDelegate&) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TDelegate = AnchorsVerifier<void, MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_verifier.h:193:11:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_verifier.h:112:39:   required from 'void verify(Verifier<THaystack, TNeedle, seqan::Tag<seqan::AffineGaps_> >&, const TNeedle&, THaystackPos, THaystackPos, TErrors, TErrors, TDelegate&) [with THaystack = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::Owner<seqan::ConcatDirect<Limits<long unsigned int> > > >; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THaystackPos = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TErrors = long unsigned int; TDelegate = AnchorsVerifier<void, MapperTraits<void, ReadMapperConfig<seqan::Tag<seqan::Parallel_>, seqan::Tag<PairedEnd_>, seqan::Tag<Strata_>, unsigned char, unsigned int, unsigned int, seqan::MMap<>, 3> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper_verifier.h:193:11:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_lexical.h:287:63:   required from 'void seqan::compare_(Lexical<TSpec>&, TLeft&, TRight&) [with TSpec = long unsigned int; TLeft = const ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >; TRight = const ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_lexical.h:323:13:   required from 'void seqan::compare(Lexical<TSpec>&, const TLeft&, const TRight&) [with TSpec = long unsigned int; TLeft = ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >; TRight = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_lexical.h:170:16:   required from 'seqan::Lexical<TSpec>::Lexical(const TLeft&, const TRight&) [with TLeft = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::MMap<> > >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TRight = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_lexical.h:750:38:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:994:21:   required from 'bool seqan::_patternInitSmallStateBanded(TFinder&, const TNeedle2&, PatternState_<TNeedle, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TNeedle2 = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFinderCSP = NMatchesNone_; TPatternCSP = NMatchesNone_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1181:44:   required from 'bool seqan::_stateInit(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TNeedle2 = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFinderCSP = NMatchesNone_; TPatternCSP = NMatchesNone_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1535:24:   required from 'bool seqan::find(TFinder&, const TNeedle&, PatternState_<TNeedle2, Myers<AlignTextBanded<TSpec, TFinderCSP, TPatternCSP>, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TNeedle2 = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFinderCSP = NMatchesNone_; TPatternCSP = NMatchesNone_; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1646:16:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>; TStrategy = seqan::Tag<All_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:402:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<SingleEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:413:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:382:27:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, Dna5_>; TSeqVValue = SimpleType<unsigned char, Dna5Q_>; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<AffineGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, Dna5_>; TSeqVValue = SimpleType<unsigned char, Dna5Q_>; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TChar, TStringSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Packed<MMap<> > >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/find_verifier.h:112:39:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:347:57:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TContigsLen = unsigned int; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:360:48:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TContigsSize = unsigned char; TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:377:33:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&, const TStrategy&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>; TStrategy = seqan::Tag<Strata_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:399:31:   required from 'void configureMapper(const Options&, const TThreading&, const TSequencing&) [with TThreading = seqan::Tag<seqan::Parallel_>; TSequencing = seqan::Tag<PairedEnd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:415:24:   required from 'void configureMapper(const Options&, const TThreading&) [with TThreading = seqan::Tag<seqan::Parallel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/mapper.cpp:422:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
[  4%] Linking CXX executable ../../bin/yara_indexer
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara && /usr/bin/cmake -E cmake_link_script CMakeFiles/yara_indexer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/yara_indexer.dir/indexer.cpp.o -o ../../bin/yara_indexer  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target yara_indexer
make  -f tests/align/CMakeFiles/test_align.dir/build.make tests/align/CMakeFiles/test_align.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align.dir/build.make tests/align/CMakeFiles/test_align.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object tests/align/CMakeFiles/test_align.dir/test_align.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align/CMakeFiles/test_align.dir/test_align.cpp.o -MF CMakeFiles/test_align.dir/test_align.cpp.o.d -o CMakeFiles/test_align.dir/test_align.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_stream.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:83:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_base.h: In instantiation of 'seqan::Iter<TGaps, seqan::GapsIterator<TSpec> > seqan::operator++(Iter<TGaps, GapsIterator<TSpec> >&, int) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >; TSpec = AnchorGaps<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:183:11:   required from 'void testAlignGapsIteratorMovement(const TGapsSpec&) [with TGapsSpec = seqan::AnchorGaps<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:1157:34:   required from 'void SEQAN_TEST_test_align_gaps_iterator_anchor_movement() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:156:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_base.h:205:39: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  205 |     Iter<TGaps, GapsIterator<TSpec> > ret = it;
      |                                       ^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_base.h:207:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  207 |     return ret;
      |            ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_base.h: In instantiation of 'seqan::Iter<TGaps, seqan::GapsIterator<TSpec> > seqan::operator--(Iter<TGaps, GapsIterator<TSpec> >&, int) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >; TSpec = AnchorGaps<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:219:11:   required from 'void testAlignGapsIteratorMovement(const TGapsSpec&) [with TGapsSpec = seqan::AnchorGaps<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:1157:34:   required from 'void SEQAN_TEST_test_align_gaps_iterator_anchor_movement() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:156:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_base.h:226:39: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  226 |     Iter<TGaps, GapsIterator<TSpec> > ret = it;
      |                                       ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_base.h:228:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  228 |     return ret;
      |            ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >; TGapAnchors = String<GapAnchor<unsigned int> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:345:5:   required from 'void testAlignGapsIteratorPointerArithmetic(const TGapsSpec&) [with TGapsSpec = seqan::AnchorGaps<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:1171:43:   required from 'void SEQAN_TEST_test_align_gaps_iterator_anchor_pointer_arithmetic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:158:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator-(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >; TGapAnchors = String<GapAnchor<unsigned int> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:346:5:   required from 'void testAlignGapsIteratorPointerArithmetic(const TGapsSpec&) [with TGapsSpec = seqan::AnchorGaps<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:1171:43:   required from 'void SEQAN_TEST_test_align_gaps_iterator_anchor_pointer_arithmetic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:158:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:760:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  760 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:762:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  762 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:189:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:16: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  714 |     best_begin = _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,(top(sw_finder.pQ)).id_), score_);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:748:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  748 |     next_best_begin= _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,next_best_end), score_);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:16: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  714 |     best_begin = _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,(top(sw_finder.pQ)).id_), score_);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:748:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  748 |     next_best_begin= _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,next_best_end), score_);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:177:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h: In instantiation of 'TScoreValue seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const Hirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; Hirschberg = Tag<Hirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:72:28:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, Tag<Simple_> >&, const Hirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:167:36:   required from 'void SEQAN_TEST_test_align_global_alignment_hirschberg_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:595:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:468:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  468 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:487:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  487 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:489:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  489 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:518:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  518 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:543:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  543 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:183:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h: In instantiation of 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:95:28:   required from 'int seqan::globalAlignment(Align<TSource, TSpec>&, const MyersHirschberg&) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:205:36:   required from 'void SEQAN_TEST_test_align_global_alignment_myers_hirschberg_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:599:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:348:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  348 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:368:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  368 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:370:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  370 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:398:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  398 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:423:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  423 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h: In instantiation of 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:104:28:   required from 'int seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:231:36:   required from 'void SEQAN_TEST_test_align_global_alignment_myers_hirschberg_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:600:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:348:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  348 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:368:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  368 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:370:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  370 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:398:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  398 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:423:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  423 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h: In instantiation of 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:167:28:   required from 'int seqan::globalAlignmentScore(const String<TValue, TSpec>&, const String<TAlphabetV, TSpecV>&, const MyersHirschberg&) [with TAlphabetH = SimpleType<unsigned char, Dna5_>; TSpecH = Alloc<>; TAlphabetV = SimpleType<unsigned char, Dna_>; TSpecV = Alloc<>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:311:31:   required from 'void SEQAN_TEST_test_align_global_alignment_score_myers_hirschberg() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:606:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:348:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  348 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:368:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  368 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:370:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  370 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:398:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  398 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:423:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  423 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >; TGapAnchors = String<GapAnchor<unsigned int> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >, GapsIterator<AnchorGaps<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >; TSpec = GapsIterator<AnchorGaps<> >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >, GapsIterator<AnchorGaps<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps.h:835:5:   required from 'void testAlignGapsIteratorInterfaceBegin(const TGapsSpec&) [with TGapsSpec = seqan::AnchorGaps<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps.h:1682:40:   required from 'void SEQAN_TEST_test_align_gaps_anchor_gaps_iterator_interface_begin() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:111:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_interface.h: In instantiation of 'void seqan::goEnd(TIterator&, TContainer&) [with TIterator = Iter<Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, GapsIterator<Tag<ArrayGaps_> > >; TContainer = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_interface.h:430:10:   required from 'void seqan::goEnd(TIterator&) [with TIterator = Iter<Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, GapsIterator<Tag<ArrayGaps_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:274:14:   required from 'void testAlignGapsIteratorMovement(const TGapsSpec&) [with TGapsSpec = seqan::Tag<seqan::ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:1062:34:   required from 'void SEQAN_TEST_test_align_gaps_iterator_array_movement() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:142:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_interface.h:415:8: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |     it = end(container);
      |     ~~~^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_interface.h: In instantiation of 'void seqan::goBegin(TIterator&, TContainer&) [with TIterator = Iter<Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, GapsIterator<Tag<ArrayGaps_> > >; TContainer = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_interface.h:403:12:   required from 'void seqan::goBegin(TIterator&) [with TIterator = Iter<Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, GapsIterator<Tag<ArrayGaps_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:281:16:   required from 'void testAlignGapsIteratorMovement(const TGapsSpec&) [with TGapsSpec = seqan::Tag<seqan::ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps_iterator.h:1062:34:   required from 'void SEQAN_TEST_test_align_gaps_iterator_array_movement() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:142:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_interface.h:387:8: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  387 |     it = begin(container);
      |     ~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h: In instantiation of 'bool _validateAlignment(const TAlignment&, const seqan::AlignConfig<FreeTop, FreeLeft, FreeRight, FreeBottom, TACSpec>&, const TScore&, const seqan::Score<TScore, seqan::Tag<seqan::Simple_> >&) [with TAlignment = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; bool FreeTop = false; bool FreeLeft = false; bool FreeRight = false; bool FreeBottom = false; TACSpec = seqan::Tag<seqan::Default_>; TScore = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:194:9:   required from 'void testDynamicGapInterfaces(TAlign&, const TAlgorithm&, const TAlignConfig&, int, int) [with TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignConfig = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:224:33:   required from 'void testDynamicGapInterfaces(const TAlgorithm&, const TAlignConfig&, int, int) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignConfig = seqan::AlignConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:271:29:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_dynamic_cost() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:494:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:109:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  109 |         itH = begin(row(align, 0), Standard());
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:125:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  125 |         itV = begin(row(align, 1), Standard());
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:141:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  141 |         itH = end(row(align, 0), Standard()) - 1;
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:157:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  157 |         itV = end(row(align, 1), Standard()) - 1;
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h: In instantiation of 'bool _validateAlignment(const TAlignment&, const seqan::AlignConfig<FreeTop, FreeLeft, FreeRight, FreeBottom, TACSpec>&, const TScore&, const seqan::Score<TScore, seqan::Tag<seqan::Simple_> >&) [with TAlignment = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; bool FreeTop = false; bool FreeLeft = true; bool FreeRight = true; bool FreeBottom = false; TACSpec = seqan::Tag<seqan::Default_>; TScore = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:194:9:   required from 'void testDynamicGapInterfaces(TAlign&, const TAlgorithm&, const TAlignConfig&, int, int) [with TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:224:33:   required from 'void testDynamicGapInterfaces(const TAlgorithm&, const TAlignConfig&, int, int) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:272:29:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_dynamic_cost() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:494:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:109:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  109 |         itH = begin(row(align, 0), Standard());
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:125:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  125 |         itV = begin(row(align, 1), Standard());
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:141:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  141 |         itH = end(row(align, 0), Standard()) - 1;
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:157:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  157 |         itV = end(row(align, 1), Standard()) - 1;
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h: In instantiation of 'bool _validateAlignment(const TAlignment&, const seqan::AlignConfig<FreeTop, FreeLeft, FreeRight, FreeBottom, TACSpec>&, const TScore&, const seqan::Score<TScore, seqan::Tag<seqan::Simple_> >&) [with TAlignment = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; bool FreeTop = true; bool FreeLeft = false; bool FreeRight = false; bool FreeBottom = true; TACSpec = seqan::Tag<seqan::Default_>; TScore = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:194:9:   required from 'void testDynamicGapInterfaces(TAlign&, const TAlgorithm&, const TAlignConfig&, int, int) [with TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignConfig = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:224:33:   required from 'void testDynamicGapInterfaces(const TAlgorithm&, const TAlignConfig&, int, int) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignConfig = seqan::AlignConfig<true, false, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:273:29:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_dynamic_cost() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:494:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:109:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  109 |         itH = begin(row(align, 0), Standard());
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:125:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  125 |         itV = begin(row(align, 1), Standard());
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:141:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  141 |         itH = end(row(align, 0), Standard()) - 1;
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:157:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  157 |         itV = end(row(align, 1), Standard()) - 1;
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h: In instantiation of 'bool _validateAlignment(const TAlignment&, const seqan::AlignConfig<FreeTop, FreeLeft, FreeRight, FreeBottom, TACSpec>&, const TScore&, const seqan::Score<TScore, seqan::Tag<seqan::Simple_> >&) [with TAlignment = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; bool FreeTop = true; bool FreeLeft = true; bool FreeRight = true; bool FreeBottom = true; TACSpec = seqan::Tag<seqan::Default_>; TScore = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:194:9:   required from 'void testDynamicGapInterfaces(TAlign&, const TAlgorithm&, const TAlignConfig&, int, int) [with TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignConfig = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:224:33:   required from 'void testDynamicGapInterfaces(const TAlgorithm&, const TAlignConfig&, int, int) [with TAlgorithm = seqan::Tag<seqan::NeedlemanWunsch_>; TAlignConfig = seqan::AlignConfig<true, true, true, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:274:29:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_dynamic_cost() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:494:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:109:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  109 |         itH = begin(row(align, 0), Standard());
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:125:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  125 |         itV = begin(row(align, 1), Standard());
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:141:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  141 |         itH = end(row(align, 0), Standard()) - 1;
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_dynamic_gap.h:157:13: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  157 |         itV = end(row(align, 1), Standard()) - 1;
      |         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:395:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:16: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  714 |     best_begin = _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,(top(sw_finder.pQ)).id_), score_);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:395:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:748:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  748 |     next_best_begin= _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,next_best_end), score_);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:235:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  235 |     finger1 = col_;
      |     ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:253:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  253 |         finger2 = col_;        //points to last column
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:255:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  255 |         finger1 = col_;
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'typename seqan::Iterator<seqan::Matrix<TScoreValue, DIMENSION>, const seqan::Tag<seqan::Standard_> >::Type seqan::_smithWatermanTrace(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix&, Iter<Matrix<TScoreValue, DIMENSION>, CountingIteratorImpl_<Tag<Nothing_> > >, const Score<TScoreValue2, TScoreSpec>&) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; unsigned int DIMENSION = 0; typename Iterator<Matrix<TScoreValue, DIMENSION>, const Tag<Standard_> >::Type = Iter<Matrix<int>, CountingIteratorImpl_<Tag<Nothing_> > >; typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix = String<bool>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:37:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:595:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  595 |             it_ = source_;
      |             ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'void seqan::_smithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, TScoreSpec>&) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:736:26:   required from 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:445:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  445 |         finger1 = end_col;        //points to last column
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:447:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  447 |         finger0 = end_col;
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:235:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  235 |     finger1 = col_;
      |     ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:253:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  253 |         finger2 = col_;        //points to last column
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:255:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  255 |         finger1 = col_;
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'typename seqan::Iterator<seqan::Matrix<TScoreValue, DIMENSION>, const seqan::Tag<seqan::Standard_> >::Type seqan::_smithWatermanTrace(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix&, Iter<Matrix<TScoreValue, DIMENSION>, CountingIteratorImpl_<Tag<Nothing_> > >, const Score<TScoreValue2, TScoreSpec>&) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; unsigned int DIMENSION = 0; typename Iterator<Matrix<TScoreValue, DIMENSION>, const Tag<Standard_> >::Type = Iter<Matrix<int>, CountingIteratorImpl_<Tag<Nothing_> > >; typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix = String<bool>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:37:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:595:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  595 |             it_ = source_;
      |             ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'void seqan::_smithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, TScoreSpec>&) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:736:26:   required from 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:445:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  445 |         finger1 = end_col;        //points to last column
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:447:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  447 |         finger0 = end_col;
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:190:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScore = Score<int, Tag<Simple_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local_banded.h:417:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_banded_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:575:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local_banded.h:521:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_banded_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:575:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h: In instantiation of 'TScoreValue seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const Hirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; Hirschberg = Tag<Hirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:72:28:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, Tag<Simple_> >&, const Hirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:83:27:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, Tag<Simple_> >&, const Hirschberg&) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:139:36:   required from 'void SEQAN_TEST_test_align_global_alignment_hirschberg_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:594:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:468:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  468 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:487:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  487 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:489:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  489 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:518:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  518 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:543:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  543 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h: In instantiation of 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:199:32:   required from 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:104:28:   required from 'int seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:231:36:   required from 'void SEQAN_TEST_test_align_global_alignment_myers_hirschberg_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:600:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:348:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  348 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:368:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  368 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:370:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  370 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:398:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  398 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:423:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  423 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h: In instantiation of 'TScoreValue seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const Hirschberg&) [with TSequenceH = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; Hirschberg = Tag<Hirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:72:28:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, Tag<Simple_> >&, const Hirschberg&) [with TSequenceH = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:142:27:   required from 'TScoreValue seqan::globalAlignmentScore(const String<TValue, TSpec>&, const String<TAlphabetV, TSpecV>&, const Score<TScoreValue, Tag<Simple_> >&, const Hirschberg&) [with TAlphabetH = SimpleType<unsigned char, Dna5_>; TSpecH = Alloc<>; TAlphabetV = SimpleType<unsigned char, Dna_>; TSpecV = Alloc<>; TScoreValue = int; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:270:31:   required from 'void SEQAN_TEST_test_align_global_alignment_score_hirschberg() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:604:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:468:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  468 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:487:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  487 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:489:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  489 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:518:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  518 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:543:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  543 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h: In instantiation of 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:199:32:   required from 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:167:28:   required from 'int seqan::globalAlignmentScore(const String<TValue, TSpec>&, const String<TAlphabetV, TSpecV>&, const MyersHirschberg&) [with TAlphabetH = SimpleType<unsigned char, Dna5_>; TSpecH = Alloc<>; TAlphabetV = SimpleType<unsigned char, Dna_>; TSpecV = Alloc<>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:311:31:   required from 'void SEQAN_TEST_test_align_global_alignment_score_myers_hirschberg() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:606:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:348:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  348 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:368:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  368 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:370:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  370 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:398:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  398 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:423:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  423 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h: In instantiation of 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:167:28:   required from 'int seqan::globalAlignmentScore(const String<TValue, TSpec>&, const String<TAlphabetV, TSpecV>&, const MyersHirschberg&) [with TAlphabetH = SimpleType<unsigned char, Dna5_>; TSpecH = Alloc<>; TAlphabetV = SimpleType<unsigned char, Dna5_>; TSpecV = Alloc<>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:175:32:   required from 'int seqan::globalAlignmentScore(const StringSet<TString, TSpec>&, const MyersHirschberg&) [with TString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = Owner<>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:314:31:   required from 'void SEQAN_TEST_test_align_global_alignment_score_myers_hirschberg() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:606:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:348:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  348 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:368:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  368 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:370:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  370 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:398:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  398 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:423:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  423 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >; TGapAnchors = String<GapAnchor<unsigned int> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:294:86:   required from 'typename seqan::Reference<seqan::Gaps<TSequence, TSpec> >::Type seqan::value(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = AnchorGaps<>; TPosition = long int; typename Reference<Gaps<TSequence, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >, GapsIterator<AnchorGaps<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:226:21:   required from 'typename seqan::Reference<seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> > >::Type seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::operator[](TPosition_) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TGapAnchors = seqan::String<seqan::GapAnchor<unsigned int> >; typename seqan::Reference<seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> > >::Type = seqan::Proxy<seqan::IteratorProxy<seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > > > >; TPosition_ = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps.h:205:9:   required from 'void testAlignGapsGapOperationsGapCenter(const TGapsSpec&) [with TGapsSpec = seqan::AnchorGaps<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps.h:1633:40:   required from 'void SEQAN_TEST_test_align_gaps_anchor_gaps_gap_operations_gaps_center() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:104:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:294:57:   required from 'typename seqan::Reference<seqan::Gaps<TSequence, TSpec> >::Type seqan::value(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = AnchorGaps<>; TPosition = long int; typename Reference<Gaps<TSequence, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >, GapsIterator<AnchorGaps<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:226:21:   required from 'typename seqan::Reference<seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> > >::Type seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::operator[](TPosition_) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TGapAnchors = seqan::String<seqan::GapAnchor<unsigned int> >; typename seqan::Reference<seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> > >::Type = seqan::Proxy<seqan::IteratorProxy<seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > > > >; TPosition_ = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps.h:205:9:   required from 'void testAlignGapsGapOperationsGapCenter(const TGapsSpec&) [with TGapsSpec = seqan::AnchorGaps<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps.h:1633:40:   required from 'void SEQAN_TEST_test_align_gaps_anchor_gaps_gap_operations_gaps_center() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:104:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = const Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >; TGapAnchors = String<GapAnchor<unsigned int> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:689:35:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TExpand> >::Type seqan::iter(const T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >; TPos = int; TTag = Standard_; typename Iterator<const T, const Tag<TExpand> >::Type = Iter<const Gaps<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, AnchorGaps<> >, GapsIterator<AnchorGaps<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:475:28:   required from 'bool seqan::isCharacter(const Gaps<TSequence, TSpec>&, TPos) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = AnchorGaps<>; TPos = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps.h:214:9:   required from 'void testAlignGapsGapOperationsGapCenter(const TGapsSpec&) [with TGapsSpec = seqan::AnchorGaps<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps.h:1633:40:   required from 'void SEQAN_TEST_test_align_gaps_anchor_gaps_gap_operations_gaps_center() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:104:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = const seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<> >; TGapAnchors = String<GapAnchor<unsigned int> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<char, Alloc<> >, AnchorGaps<> >; TPos = int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<char, Alloc<> >, AnchorGaps<> >, GapsIterator<AnchorGaps<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<char, Alloc<> >, AnchorGaps<> >; TPos = int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<char, Alloc<> >, AnchorGaps<> >, GapsIterator<AnchorGaps<> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<char, Alloc<> >; TGapAnchors = String<GapAnchor<unsigned int> >; TPosition = int; TCount = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_gaps.h:1795:15:   required from 'void SEQAN_TEST_test_align_gaps_anchor_gaps_clear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:127:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<> >, seqan::GapsIterator<seqan::AnchorGaps<> > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<> >; TGapAnchors_ = seqan::String<seqan::GapAnchor<unsigned int> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:395:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:235:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  235 |     finger1 = col_;
      |     ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:253:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  253 |         finger2 = col_;        //points to last column
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:255:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  255 |         finger1 = col_;
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'typename seqan::Iterator<seqan::Matrix<TScoreValue, DIMENSION>, const seqan::Tag<seqan::Standard_> >::Type seqan::_smithWatermanTrace(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix&, Iter<Matrix<TScoreValue, DIMENSION>, CountingIteratorImpl_<Tag<Nothing_> > >, const Score<TScoreValue2, TScoreSpec>&) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; unsigned int DIMENSION = 0; typename Iterator<Matrix<TScoreValue, DIMENSION>, const Tag<Standard_> >::Type = Iter<Matrix<int>, CountingIteratorImpl_<Tag<Nothing_> > >; typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix = String<bool>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:37:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:395:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:595:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  595 |             it_ = source_;
      |             ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'void seqan::_smithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, TScoreSpec>&) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:736:26:   required from 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:395:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:445:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  445 |         finger1 = end_col;        //points to last column
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:447:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  447 |         finger0 = end_col;
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:217:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:220:22:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:220:22:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScore = Score<int, Tag<Simple_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:121:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local_banded.h:304:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_banded_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:574:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h: In instantiation of 'TScoreValue seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const Hirschberg&) [with TSequenceH = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; Hirschberg = Tag<Hirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:72:28:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, Tag<Simple_> >&, const Hirschberg&) [with TSequenceH = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:142:27:   required from 'TScoreValue seqan::globalAlignmentScore(const String<TValue, TSpec>&, const String<TAlphabetV, TSpecV>&, const Score<TScoreValue, Tag<Simple_> >&, const Hirschberg&) [with TAlphabetH = SimpleType<unsigned char, Dna5_>; TSpecH = Alloc<>; TAlphabetV = SimpleType<unsigned char, Dna5_>; TSpecV = Alloc<>; TScoreValue = int; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:152:32:   required from 'TScoreValue seqan::globalAlignmentScore(const StringSet<TString, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const Hirschberg&) [with TString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = Owner<>; TScoreValue = int; TScoreSpec = Tag<Simple_>; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_global_alignment_specialized.h:274:31:   required from 'void SEQAN_TEST_test_align_global_alignment_score_hirschberg() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:604:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:468:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  468 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:487:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  487 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:489:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  489 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:518:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  518 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:543:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  543 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:258:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global.h:2654:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:480:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:37:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:216:33:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:217:37:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:217:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:218:33:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:515:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:37:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:216:33:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_local.h:627:9:   required from 'void SEQAN_TEST_test_align_local_alignment_enumeration_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:501:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global_banded.h:1979:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_banded_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:556:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global_banded.h:1979:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_banded_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:556:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global_banded.h:1979:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_banded_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:556:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global_banded.h:2007:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_banded_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:556:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:525:40:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:258:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global.h:2654:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:480:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:258:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global.h:2654:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:480:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:258:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global.h:2682:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:480:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:258:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global.h:2682:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:480:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:993:52:   required from 'void seqan::_computeHammingDistance(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:612:32:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global_banded.h:2007:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_banded_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:556:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:994:55:   required from 'void seqan::_computeHammingDistance(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:612:32:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global_banded.h:2007:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_banded_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:556:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSeqHValue = SimpleType<unsigned char, Dna5_>; TSeqVValue = SimpleType<unsigned char, Dna5_>; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPFinalColumn_>, Tag<PartialColumnTop_> >; TDPProfile = DPProfile_<GlobalAlignment_<>, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:891:38:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global_banded.h:2007:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_banded_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:556:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:427:10:   required from 'void seqan::assignSource(Gaps<TSequence, Tag<ArrayGaps_> >&, const TSequence2&) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequence2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_alignment_operations.h:69:21:   required from 'void SEQAN_TEST_test_align_integrate_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:613:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:269:34:   required from 'void seqan::_reinitArrayGaps(Gaps<TSequence, Tag<ArrayGaps_> >&) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:155:25:   required from 'seqan::Gaps<TSequence, seqan::Tag<seqan::ArrayGaps_> >::Gaps(TSequence&) [with TSequence = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global.h:2648:61:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:480:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:258:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global.h:2654:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:480:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:269:34:   required from 'void seqan::_reinitArrayGaps(Gaps<TSequence, Tag<ArrayGaps_> >&) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:155:25:   required from 'seqan::Gaps<TSequence, seqan::Tag<seqan::ArrayGaps_> >::Gaps(TSequence&) [with TSequence = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global.h:2678:61:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:480:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_> >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_alignment_algorithms_global_banded.h:2007:36:   required from 'void SEQAN_TEST_test_alignment_algorithms_global_banded_different_container() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align.cpp:556:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /usr/include/c++/13/bits/specfun.h:43,
                 from /usr/include/c++/13/cmath:3699,
                 from /usr/include/c++/13/random:40:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  4%] Linking CXX executable ../../bin/test_align
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align.dir/test_align.cpp.o -o ../../bin/test_align  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target test_align
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/test_align_simd_global_equal_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/test_align_simd_global_equal_length.cpp.o -MF CMakeFiles/test_align_simd_global_equal_length.dir/test_align_simd_global_equal_length.cpp.o.d -o CMakeFiles/test_align_simd_global_equal_length.dir/test_align_simd_global_equal_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  4%] Linking CXX executable ../../bin/test_align_simd_global_equal_length
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_global_equal_length.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_global_equal_length.dir/test_align_simd_global_equal_length.cpp.o -o ../../bin/test_align_simd_global_equal_length  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target test_align_simd_global_equal_length
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/test_align_simd_global_variable_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/test_align_simd_global_variable_length.cpp.o -MF CMakeFiles/test_align_simd_global_variable_length.dir/test_align_simd_global_variable_length.cpp.o.d -o CMakeFiles/test_align_simd_global_variable_length.dir/test_align_simd_global_variable_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  4%] Linking CXX executable ../../bin/test_align_simd_global_variable_length
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_global_variable_length.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_global_variable_length.dir/test_align_simd_global_variable_length.cpp.o -o ../../bin/test_align_simd_global_variable_length  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target test_align_simd_global_variable_length
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/test_align_simd_local_equal_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/test_align_simd_local_equal_length.cpp.o -MF CMakeFiles/test_align_simd_local_equal_length.dir/test_align_simd_local_equal_length.cpp.o.d -o CMakeFiles/test_align_simd_local_equal_length.dir/test_align_simd_local_equal_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  4%] Linking CXX executable ../../bin/test_align_simd_local_equal_length
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_local_equal_length.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_local_equal_length.dir/test_align_simd_local_equal_length.cpp.o -o ../../bin/test_align_simd_local_equal_length  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target test_align_simd_local_equal_length
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/test_align_simd_local_variable_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/test_align_simd_local_variable_length.cpp.o -MF CMakeFiles/test_align_simd_local_variable_length.dir/test_align_simd_local_variable_length.cpp.o.d -o CMakeFiles/test_align_simd_local_variable_length.dir/test_align_simd_local_variable_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  4%] Linking CXX executable ../../bin/test_align_simd_local_variable_length
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_local_variable_length.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_local_variable_length.dir/test_align_simd_local_variable_length.cpp.o -o ../../bin/test_align_simd_local_variable_length  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Built target test_align_simd_local_variable_length
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  4%] Building CXX object tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/test_align_simd_global_equal_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -msse4 -MD -MT tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/test_align_simd_global_equal_length.cpp.o -MF CMakeFiles/test_align_simd_global_equal_length_sse4.dir/test_align_simd_global_equal_length.cpp.o.d -o CMakeFiles/test_align_simd_global_equal_length_sse4.dir/test_align_simd_global_equal_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  5%] Linking CXX executable ../../bin/yara_mapper
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara && /usr/bin/cmake -E cmake_link_script CMakeFiles/yara_mapper.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/yara_mapper.dir/mapper.cpp.o -o ../../bin/yara_mapper  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  5%] Built target yara_mapper
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  5%] Building CXX object tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/test_align_simd_global_equal_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -mavx2 -MD -MT tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/test_align_simd_global_equal_length.cpp.o -MF CMakeFiles/test_align_simd_global_equal_length_avx2.dir/test_align_simd_global_equal_length.cpp.o.d -o CMakeFiles/test_align_simd_global_equal_length_avx2.dir/test_align_simd_global_equal_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_equal_length.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  5%] Linking CXX executable ../../bin/test_align_simd_global_equal_length_sse4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_global_equal_length_sse4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_global_equal_length_sse4.dir/test_align_simd_global_equal_length.cpp.o -o ../../bin/test_align_simd_global_equal_length_sse4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  5%] Built target test_align_simd_global_equal_length_sse4
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Building CXX object tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/test_align_simd_global_variable_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -msse4 -MD -MT tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/test_align_simd_global_variable_length.cpp.o -MF CMakeFiles/test_align_simd_global_variable_length_sse4.dir/test_align_simd_global_variable_length.cpp.o.d -o CMakeFiles/test_align_simd_global_variable_length_sse4.dir/test_align_simd_global_variable_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  6%] Linking CXX executable ../../bin/test_align_simd_global_equal_length_avx2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_global_equal_length_avx2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_global_equal_length_avx2.dir/test_align_simd_global_equal_length.cpp.o -o ../../bin/test_align_simd_global_equal_length_avx2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Built target test_align_simd_global_equal_length_avx2
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Building CXX object tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/test_align_simd_global_variable_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -mavx2 -MD -MT tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/test_align_simd_global_variable_length.cpp.o -MF CMakeFiles/test_align_simd_global_variable_length_avx2.dir/test_align_simd_global_variable_length.cpp.o.d -o CMakeFiles/test_align_simd_global_variable_length_avx2.dir/test_align_simd_global_variable_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global_variable_length.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::GlobalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<false, true, true, false>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_global.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  6%] Linking CXX executable ../../bin/test_align_simd_global_variable_length_sse4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_global_variable_length_sse4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_global_variable_length_sse4.dir/test_align_simd_global_variable_length.cpp.o -o ../../bin/test_align_simd_global_variable_length_sse4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Built target test_align_simd_global_variable_length_sse4
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Building CXX object tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/test_align_simd_local_equal_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -msse4 -MD -MT tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/test_align_simd_local_equal_length.cpp.o -MF CMakeFiles/test_align_simd_local_equal_length_sse4.dir/test_align_simd_local_equal_length.cpp.o.d -o CMakeFiles/test_align_simd_local_equal_length_sse4.dir/test_align_simd_local_equal_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  6%] Linking CXX executable ../../bin/test_align_simd_global_variable_length_avx2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_global_variable_length_avx2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_global_variable_length_avx2.dir/test_align_simd_global_variable_length.cpp.o -o ../../bin/test_align_simd_global_variable_length_avx2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Built target test_align_simd_global_variable_length_avx2
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Building CXX object tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/test_align_simd_local_equal_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -mavx2 -MD -MT tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/test_align_simd_local_equal_length.cpp.o -MF CMakeFiles/test_align_simd_local_equal_length_avx2.dir/test_align_simd_local_equal_length.cpp.o.d -o CMakeFiles/test_align_simd_local_equal_length_avx2.dir/test_align_simd_local_equal_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_equal_length.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>; TBandFlag = seqan::Tag<seqan::BandOn_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  6%] Linking CXX executable ../../bin/test_align_simd_local_equal_length_sse4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_local_equal_length_sse4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_local_equal_length_sse4.dir/test_align_simd_local_equal_length.cpp.o -o ../../bin/test_align_simd_local_equal_length_sse4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Built target test_align_simd_local_equal_length_sse4
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Building CXX object tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/test_align_simd_local_variable_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -msse4 -MD -MT tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/test_align_simd_local_variable_length.cpp.o -MF CMakeFiles/test_align_simd_local_variable_length_sse4.dir/test_align_simd_local_variable_length.cpp.o.d -o CMakeFiles/test_align_simd_local_variable_length_sse4.dir/test_align_simd_local_variable_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  6%] Linking CXX executable ../../bin/test_align_simd_local_equal_length_avx2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_local_equal_length_avx2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_local_equal_length_avx2.dir/test_align_simd_local_equal_length.cpp.o -o ../../bin/test_align_simd_local_equal_length_avx2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Built target test_align_simd_local_equal_length_avx2
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Building CXX object tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/test_align_simd_local_variable_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -mavx2 -MD -MT tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/test_align_simd_local_variable_length.cpp.o -MF CMakeFiles/test_align_simd_local_variable_length_avx2.dir/test_align_simd_local_variable_length.cpp.o.d -o CMakeFiles/test_align_simd_local_variable_length_avx2.dir/test_align_simd_local_variable_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local_variable_length.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::AminoAcid_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::ScoreSpecSelectable>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:91:36:   required from 'void SimdAlignTestCommon__Dynamic_Score_Matrix_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:80:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource1 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*; TSource2 = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_base.h:1301:18:   required from 'typename seqan::Size<seqan::StringSet<TString, TSpec> >::Type seqan::resize(StringSet<TString, TSpec>&, TSize, Tag<TUsage>) [with TString = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >; TSpec = Owner<>; TSize = long unsigned int; TExpand = TagGenerous_; typename Size<StringSet<TString, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = StringSet<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<ArrayGaps_> >, Owner<> >&; TSize = long unsigned int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:166:11:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, int, int) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_base.h:216:33:   required from 'void testAlignSimd(const TFunctor&, const seqan::Score<TScoreValue, TScoreSpec>&, const TAlignConfig&, const TSimdLength&, const TBandFlag&) [with TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>; TFunctor = impl::test_align_simd::LocalAlignTester_; TScoreValue = int; TScoreSpec = seqan::Tag<seqan::Simple_>; TAlignConfig = seqan::AlignConfig<>; TSimdLength = seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>; TBandFlag = seqan::Tag<seqan::BandOff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:74:30:   required from 'void SimdAlignTestCommon__Affine_Align<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align/test_align_simd_local.h:68:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[  7%] Linking CXX executable ../../bin/test_align_simd_local_variable_length_sse4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_local_variable_length_sse4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_local_variable_length_sse4.dir/test_align_simd_local_variable_length.cpp.o -o ../../bin/test_align_simd_local_variable_length_sse4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  7%] Built target test_align_simd_local_variable_length_sse4
make  -f tests/align_extend/CMakeFiles/test_align_extend.dir/build.make tests/align_extend/CMakeFiles/test_align_extend.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_extend /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_extend/CMakeFiles/test_align_extend.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_extend/CMakeFiles/test_align_extend.dir/build.make tests/align_extend/CMakeFiles/test_align_extend.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  7%] Building CXX object tests/align_extend/CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_extend && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align_extend/CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o -MF CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o.d -o CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend.h:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h: In instantiation of 'void SEQAN_TEST_test_align_extend_semiglobal() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:558:16: warning: implicitly-declared 'seqan::Align<seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  558 |         TAlign align(alignOrig);
      |                ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:586:16: warning: implicitly-declared 'seqan::Align<seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  586 |         TAlign align(alignOrig);
      |                ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:620:16: warning: implicitly-declared 'seqan::Align<seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  620 |         TAlign align(alignOrig);
      |                ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:519:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:65:32:   required from 'void SEQAN_TEST_test_align_extend_simple() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:434:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:519:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:65:32:   required from 'void SEQAN_TEST_test_align_extend_simple() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = Segment<String<char, Alloc<> >, InfixSegment>; TString1 = Segment<String<char, Alloc<> >, InfixSegment>; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = Segment<String<char, Alloc<> >, InfixSegment>; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = Segment<String<char, Alloc<> >, InfixSegment>; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:504:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = Segment<String<char, Alloc<> >, InfixSegment>; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:178:36:   required from 'void SEQAN_TEST_test_align_extend_simple_infixes_recomp() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = Segment<String<char, Alloc<> >, InfixSegment>; TString1 = Segment<String<char, Alloc<> >, InfixSegment>; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = Segment<String<char, Alloc<> >, InfixSegment>; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:434:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = Segment<String<char, Alloc<> >, InfixSegment>; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:504:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = Segment<String<char, Alloc<> >, InfixSegment>; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:178:36:   required from 'void SEQAN_TEST_test_align_extend_simple_infixes_recomp() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:536:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:287:24:   required from 'void SEQAN_TEST_test_align_extend_banded() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:434:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:536:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:287:24:   required from 'void SEQAN_TEST_test_align_extend_banded() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:569:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:415:24:   required from 'void SEQAN_TEST_test_align_extend_xdrop() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:434:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:569:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:415:24:   required from 'void SEQAN_TEST_test_align_extend_xdrop() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:603:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:514:24:   required from 'void SEQAN_TEST_test_align_extend_xdrop_banded() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:48:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:434:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:603:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:514:24:   required from 'void SEQAN_TEST_test_align_extend_xdrop_banded() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:48:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:519:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:65:32:   required from 'void SEQAN_TEST_test_align_extend_simple() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<char, Alloc<> >, InfixSegment>*; TParam = const Segment<const String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<const String<char, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<const String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<const String<char, Alloc<> >, InfixSegment>; TValue2 = Segment<const String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<const String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<const String<char, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<const String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:427:10:   required from 'void seqan::assignSource(Gaps<TSequence, Tag<ArrayGaps_> >&, const TSequence2&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TSequence2 = Segment<const String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:59:21:   required from 'void SEQAN_TEST_test_align_extend_simple() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:554:20:   required from 'void SEQAN_TEST_test_align_extend_semiglobal() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:554:20:   required from 'void SEQAN_TEST_test_align_extend_semiglobal() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:554:20:   required from 'void SEQAN_TEST_test_align_extend_semiglobal() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<AlignExtend_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:157:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const False&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TString1 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsRight_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:297:42:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:536:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:287:24:   required from 'void SEQAN_TEST_test_align_extend_banded() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<AlignExtend_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:157:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const False&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = Segment<const String<char, Alloc<> >, InfixSegment>; TString1 = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:351:43:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:536:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:287:24:   required from 'void SEQAN_TEST_test_align_extend_banded() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<AlignExtend_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:157:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const False&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = Segment<const String<char, Alloc<> >, InfixSegment>; TString1 = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:351:43:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:536:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:287:24:   required from 'void SEQAN_TEST_test_align_extend_banded() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:397:81:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<AlignExtend_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSeqHValue = char; TSeqVValue = char; TSeqVIterator = ModifiedIterator<Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPFinalColumn_>, Tag<PartialColumnTop_> >; TDPProfile = DPProfile_<AlignExtend_<>, Tag<LinearGaps_>, TracebackOn<>, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:891:38:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<AlignExtend_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:157:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const False&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TString1 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsRight_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:297:42:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:536:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:287:24:   required from 'void SEQAN_TEST_test_align_extend_banded() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<const String<char, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<AlignExtend_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWise_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = AlignExtend_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = AlignExtend_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:297:42:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:519:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:65:32:   required from 'void SEQAN_TEST_test_align_extend_simple() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<const String<char, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<AlignExtend_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWise_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = AlignExtend_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = AlignExtend_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:297:42:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = False; TBoolXDrop = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:519:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.h:65:32:   required from 'void SEQAN_TEST_test_align_extend_simple() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend/test_align_extend.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
[  7%] Linking CXX executable ../../bin/test_align_simd_local_variable_length_avx2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_simd_local_variable_length_avx2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_simd_local_variable_length_avx2.dir/test_align_simd_local_variable_length.cpp.o -o ../../bin/test_align_simd_local_variable_length_avx2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  7%] Built target test_align_simd_local_variable_length_avx2
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  7%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o -MF CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o.d -o CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_data_structures.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_parallel.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_wavefront_task_scheduler.h:35,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_data_structures.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_data_structures.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  7%] Linking CXX executable ../../bin/test_align_extend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_extend && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_extend.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o -o ../../bin/test_align_extend  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  7%] Built target test_align_extend
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  7%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o -MF CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o.d -o CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_algorithm.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_parallel.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_wavefront_alignment.h:35,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_algorithm.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_algorithm.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  7%] Linking CXX executable ../../bin/test_align_parallel_data_structures
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_data_structures.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o -o ../../bin/test_align_parallel_data_structures  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  7%] Built target test_align_parallel_data_structures
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  7%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o -MF CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o.d -o CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_parallel.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.h:37,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  8%] Linking CXX executable ../../bin/test_align_parallel_algorithm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_algorithm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o -o ../../bin/test_align_parallel_algorithm  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  8%] Built target test_align_parallel_algorithm
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  8%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/test_align_parallel_interface.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -msse4 -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/test_align_parallel_interface.cpp.o -MF CMakeFiles/test_align_parallel_interface_sse4.dir/test_align_parallel_interface.cpp.o.d -o CMakeFiles/test_align_parallel_interface_sse4.dir/test_align_parallel_interface.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_parallel.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.h:37,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  8%] Linking CXX executable ../../bin/test_align_parallel_interface
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_interface.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o -o ../../bin/test_align_parallel_interface  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  8%] Built target test_align_parallel_interface
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  8%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/test_align_parallel_interface.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -mavx2 -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/test_align_parallel_interface.cpp.o -MF CMakeFiles/test_align_parallel_interface_avx2.dir/test_align_parallel_interface.cpp.o.d -o CMakeFiles/test_align_parallel_interface_avx2.dir/test_align_parallel_interface.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_parallel.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.h:37,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_interface.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  8%] Linking CXX executable ../../bin/test_align_parallel_interface_sse4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_interface_sse4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_parallel_interface_sse4.dir/test_align_parallel_interface.cpp.o -o ../../bin/test_align_parallel_interface_sse4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  8%] Built target test_align_parallel_interface_sse4
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  8%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/test_align_parallel_algorithm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -msse4 -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/test_align_parallel_algorithm.cpp.o -MF CMakeFiles/test_align_parallel_algorithm_sse4.dir/test_align_parallel_algorithm.cpp.o.d -o CMakeFiles/test_align_parallel_algorithm_sse4.dir/test_align_parallel_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_algorithm.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_parallel.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_wavefront_alignment.h:35,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_algorithm.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_algorithm.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  8%] Linking CXX executable ../../bin/test_align_parallel_algorithm_sse4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_algorithm_sse4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_parallel_algorithm_sse4.dir/test_align_parallel_algorithm.cpp.o -o ../../bin/test_align_parallel_algorithm_sse4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  8%] Built target test_align_parallel_algorithm_sse4
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  8%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/test_align_parallel_algorithm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -mavx2 -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/test_align_parallel_algorithm.cpp.o -MF CMakeFiles/test_align_parallel_algorithm_avx2.dir/test_align_parallel_algorithm.cpp.o.d -o CMakeFiles/test_align_parallel_algorithm_avx2.dir/test_align_parallel_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_algorithm.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_parallel.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_wavefront_alignment.h:35,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_algorithm.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel/test_align_parallel_algorithm.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  8%] Linking CXX executable ../../bin/test_align_parallel_interface_avx2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_interface_avx2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_parallel_interface_avx2.dir/test_align_parallel_interface.cpp.o -o ../../bin/test_align_parallel_interface_avx2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  8%] Built target test_align_parallel_interface_avx2
make  -f tests/align_profile/CMakeFiles/test_align_profile.dir/build.make tests/align_profile/CMakeFiles/test_align_profile.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_profile /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_profile /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_profile/CMakeFiles/test_align_profile.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_profile/CMakeFiles/test_align_profile.dir/build.make tests/align_profile/CMakeFiles/test_align_profile.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/align_profile/CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_profile && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align_profile/CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o -MF CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o.d -o CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_profile/test_align_profile.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_profile/test_align_profile.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_profile/test_align_profile.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_profile/test_align_profile.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  9%] Linking CXX executable ../../bin/test_align_parallel_algorithm_avx2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_algorithm_avx2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_parallel_algorithm_avx2.dir/test_align_parallel_algorithm.cpp.o -o ../../bin/test_align_parallel_algorithm_avx2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_align_parallel_algorithm_avx2
make  -f tests/align_split/CMakeFiles/test_align_split.dir/build.make tests/align_split/CMakeFiles/test_align_split.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_split /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_split /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_split/CMakeFiles/test_align_split.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_split/CMakeFiles/test_align_split.dir/build.make tests/align_split/CMakeFiles/test_align_split.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/align_split/CMakeFiles/test_align_split.dir/test_align_split.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_split && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/align_split/CMakeFiles/test_align_split.dir/test_align_split.cpp.o -MF CMakeFiles/test_align_split.dir/test_align_split.cpp.o.d -o CMakeFiles/test_align_split.dir/test_align_split.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_split/test_align_split.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile/add_to_profile.h: In instantiation of 'void seqan::addToProfile(String<ProfileChar<TValue, TCount, TSpec> >&, String<TChar, TSpec2>&, int, int) [with TChar = SimpleType<unsigned char, Dna_>; TValue = int; TSpec = void; TSpec2 = Alloc<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_profile/test_align_profile.cpp:145:17:   required from 'void SEQAN_TEST_test_align_profile_add_to_profile() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_profile/test_align_profile.cpp:353:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile/add_to_profile.h:130:9: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna_>, int> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna_>, int> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna_>, int> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  130 |     itH = begin(gapsH, Standard());
      |     ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna_>, int> > >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna_>, int> > >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_split/test_align_split.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_split/test_align_split.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_split.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_split/test_align_split.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_split/test_align_split.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  9%] Linking CXX executable ../../bin/test_align_profile
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_profile && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_profile.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o -o ../../bin/test_align_profile  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_align_profile
make  -f tests/alignment_free/CMakeFiles/test_alignment_free.dir/build.make tests/alignment_free/CMakeFiles/test_alignment_free.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/alignment_free /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/alignment_free /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/alignment_free/CMakeFiles/test_alignment_free.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/alignment_free/CMakeFiles/test_alignment_free.dir/build.make tests/alignment_free/CMakeFiles/test_alignment_free.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/alignment_free/CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/alignment_free && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/alignment_free/CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o -MF CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o.d -o CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/alignment_free/test_alignment_free.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/alignment_free/test_alignment_free.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/alignment_free/test_alignment_free.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/alignment_free/test_alignment_free.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free/af_n2.h: In instantiation of 'void seqan::_alignmentFreeComparison(Matrix<TValue, 2>&, const TStringSet&, const AFScore<const Tag<N2_> >&) [with TValue = double; TStringSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free/alignment_free_comparison.h:101:29:   required from 'void seqan::alignmentFreeComparison(Matrix<TFloat, 2>&, const TStringSet&, const TComparisonMethod&) [with TStringSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TValue = double; TComparisonMethod = AFScore<const Tag<N2_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/alignment_free/test_alignment_free.cpp:304:28:   required from 'void SEQAN_TEST_test_alignment_free_n2_dna5() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/alignment_free/test_alignment_free.cpp:509:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free/af_n2.h:189:34: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<double> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<double> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<double> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  189 |         itStandardisedKmerCounts = begin(standardisedKmerCounts);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<double> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<double> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
[  9%] Linking CXX executable ../../bin/test_align_split
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_split && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_split.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_align_split.dir/test_align_split.cpp.o -o ../../bin/test_align_split  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_align_split
make  -f tests/arg_parse/CMakeFiles/test_arg_parse.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse/CMakeFiles/test_arg_parse.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/arg_parse/CMakeFiles/test_arg_parse.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/arg_parse/CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/arg_parse/CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o -MF CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o.d -o CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse.cpp
[  9%] Linking CXX executable ../../bin/test_alignment_free
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/alignment_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_alignment_free.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o -o ../../bin/test_alignment_free  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_alignment_free
make  -f tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o -MF CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o.d -o CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse_version_check.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse_version_check.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse_version_check.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse.h: In instantiation of 'void seqan::SEQAN_TEST_test_string_list() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse.cpp:79:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse.h:513:38: warning: possibly dangling reference to a temporary [-Wdangling-reference]
  513 |     std::vector<std::string> const & values = getOptionValues(parser, "string");
      |                                      ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse/test_arg_parse.h:513:62: note: the temporary was destroyed at the end of the full expression 'seqan::getOptionValues(parser, std::__cxx11::basic_string<char>(((const char*)"string"), std::allocator<char>()))'
  513 |     std::vector<std::string> const & values = getOptionValues(parser, "string");
      |                                               ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = std::__cxx11::basic_string<char>]',
    inlined from 'seqan::String<int> seqan::_getNumbersFromString(const std::string&)' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse/arg_parse_version_check.h:356:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'seqan::String<int> seqan::_getNumbersFromString(const std::string&)':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  9%] Linking CXX executable ../../bin/test_arg_parse_version_check
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse_version_check.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o -o ../../bin/test_arg_parse_version_check  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_arg_parse_version_check
make  -f tests/bam_io/CMakeFiles/test_bam_io.dir/build.make tests/bam_io/CMakeFiles/test_bam_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bam_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bam_io/CMakeFiles/test_bam_io.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/bam_io/CMakeFiles/test_bam_io.dir/build.make tests/bam_io/CMakeFiles/test_bam_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/bam_io/CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bam_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/bam_io/CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o -MF CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o.d -o CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_io.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_io.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[  9%] Linking CXX executable ../../bin/test_arg_parse
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o -o ../../bin/test_arg_parse  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_arg_parse
make  -f tests/basic/CMakeFiles/test_basic_exception.dir/build.make tests/basic/CMakeFiles/test_basic_exception.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_exception.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_exception.dir/build.make tests/basic/CMakeFiles/test_basic_exception.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/basic/CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o -MF CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o.d -o CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_exception.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_alignment_record.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_io.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_io_context.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_io.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[  9%] Linking CXX executable ../../bin/test_basic_exception
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_exception.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o -o ../../bin/test_basic_exception  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_io.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_basic_exception
make  -f tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build.make tests/basic/CMakeFiles/test_basic_metaprogramming.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_metaprogramming.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build.make tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/basic/CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o -MF CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o.d -o CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_metaprogramming.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:947:29:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::String<char, seqan::Alloc<> >; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::String<char, seqan::Alloc<> >; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_tags_dict.h:75:9:   required from 'void SEQAN_TEST_test_bam_tags_dict_get_type() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_io.cpp:117:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:947:29:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::String<char, seqan::Alloc<> >; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::String<char, seqan::Alloc<> >; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_tags_dict.h:75:9:   required from 'void SEQAN_TEST_test_bam_tags_dict_get_type() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_bam_io.cpp:117:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[  9%] Linking CXX executable ../../bin/test_basic_metaprogramming
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_metaprogramming.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o -o ../../bin/test_basic_metaprogramming  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_basic_metaprogramming
make  -f tests/basic/CMakeFiles/test_basic_fundamental.dir/build.make tests/basic/CMakeFiles/test_basic_fundamental.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_fundamental.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_fundamental.dir/build.make tests/basic/CMakeFiles/test_basic_fundamental.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/basic/CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o -MF CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o.d -o CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_fundamental.cpp
[  9%] Linking CXX executable ../../bin/test_basic_fundamental
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_fundamental.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o -o ../../bin/test_basic_fundamental  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_basic_fundamental
make  -f tests/basic/CMakeFiles/test_basic_concept.dir/build.make tests/basic/CMakeFiles/test_basic_concept.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_concept.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_concept.dir/build.make tests/basic/CMakeFiles/test_basic_concept.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/basic/CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o -MF CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o.d -o CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_concept.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_concept.h:65,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:68,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_concept.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_concepts.h: In instantiation of 'seqan::CopyConstructible<T>::~CopyConstructible() [with T = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:196:18:   required from 'seqan::usage_requirements<Model>::~usage_requirements() [with Model = seqan::CopyConstructible<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:302:18:   required from 'static void seqan::requirement<seqan::failed************ Model::************>::failed() [with Model = seqan::usage_requirements<seqan::CopyConstructible<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_concepts.h:285:5:   required from 'struct seqan::CopyConstructible<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/container_concept.h:286:8:   required from 'struct seqan::ContainerConcept<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:255:62:   required by substitution of 'template<class Model> seqan::detail::yes seqan::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = seqan::ContainerConcept<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:264:51:   required from 'struct seqan::not_satisfied<seqan::ContainerConcept<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> > >'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:317:8:   required from 'struct seqan::requirement_<void (*)(seqan::ContainerConcept<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >)>'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_fundamental_concepts.h:179:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_concepts.h:287:11: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  287 |         T a(b);            // require copy constructor
      |           ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_concept.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_concepts.h: In instantiation of 'void seqan::CopyConstructible<T>::constConstraints(const T&) [with T = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_concepts.h:289:9:   required from 'seqan::CopyConstructible<T>::~CopyConstructible() [with T = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:196:18:   required from 'seqan::usage_requirements<Model>::~usage_requirements() [with Model = seqan::CopyConstructible<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:302:18:   required from 'static void seqan::requirement<seqan::failed************ Model::************>::failed() [with Model = seqan::usage_requirements<seqan::CopyConstructible<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_concepts.h:285:5:   required from 'struct seqan::CopyConstructible<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/container_concept.h:286:8:   required from 'struct seqan::ContainerConcept<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:255:62:   required by substitution of 'template<class Model> seqan::detail::yes seqan::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = seqan::ContainerConcept<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:264:51:   required from 'struct seqan::not_satisfied<seqan::ContainerConcept<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> > >'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/concept_checking.h:317:8:   required from 'struct seqan::requirement_<void (*)(seqan::ContainerConcept<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment> >)>'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_fundamental_concepts.h:179:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_concepts.h:295:11: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         T c(a);            // require const copy constructor
      |           ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[  9%] Linking CXX executable ../../bin/test_basic_concept
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_concept.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o -o ../../bin/test_basic_concept  -lrt -lz -lbz2
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_basic_concept
make  -f tests/basic/CMakeFiles/test_basic_alphabet.dir/build.make tests/basic/CMakeFiles/test_basic_alphabet.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_alphabet.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_alphabet.dir/build.make tests/basic/CMakeFiles/test_basic_alphabet.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/basic/CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o -MF CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o.d -o CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_alphabet.cpp
[  9%] Linking CXX executable ../../bin/test_basic_alphabet
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_alphabet.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o -o ../../bin/test_basic_alphabet  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_basic_alphabet
make  -f tests/basic/CMakeFiles/test_basic_aggregate.dir/build.make tests/basic/CMakeFiles/test_basic_aggregate.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_aggregate.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_aggregate.dir/build.make tests/basic/CMakeFiles/test_basic_aggregate.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Building CXX object tests/basic/CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o -MF CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o.d -o CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_aggregate.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_aggregate.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_aggregate.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_aggregate.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Triple<int, int, int, Tag<Pack_> >; TSource = Triple<int, int, int, Tag<Pack_> >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_aggregate.h:946:15:   required from 'void SEQAN_TEST_test_basic_aggregates_triple_base_assign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_aggregate.cpp:97:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'constexpr seqan::Triple<int, int, int, seqan::Tag<seqan::Pack_> >& seqan::Triple<int, int, int, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<int, int, int, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<int, int, int, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = int; T2 = int; T3 = int]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 10%] Linking CXX executable ../../bin/test_basic_aggregate
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_aggregate.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o -o ../../bin/test_basic_aggregate  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 10%] Built target test_basic_aggregate
make  -f tests/basic/CMakeFiles/test_basic_allocator.dir/build.make tests/basic/CMakeFiles/test_basic_allocator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_allocator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_allocator.dir/build.make tests/basic/CMakeFiles/test_basic_allocator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o -MF CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o.d -o CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_allocator.cpp
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void SEQAN_TEST_test_bam_io_sam_read_alignment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io/test_read_sam.h:132:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void SEQAN_TEST_test_bam_io_sam_read_alignment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 10%] Linking CXX executable ../../bin/test_basic_allocator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_allocator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o -o ../../bin/test_basic_allocator  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 10%] Built target test_basic_allocator
make  -f tests/basic/CMakeFiles/test_basic_parallelism.dir/build.make tests/basic/CMakeFiles/test_basic_parallelism.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_parallelism.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_parallelism.dir/build.make tests/basic/CMakeFiles/test_basic_parallelism.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o -MF CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o.d -o CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_parallelism.cpp
[ 10%] Linking CXX executable ../../bin/test_basic_parallelism
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_parallelism.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o -o ../../bin/test_basic_parallelism  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 10%] Built target test_basic_parallelism
make  -f tests/basic/CMakeFiles/test_basic_math.dir/build.make tests/basic/CMakeFiles/test_basic_math.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_math.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_math.dir/build.make tests/basic/CMakeFiles/test_basic_math.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o -MF CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o.d -o CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_math.cpp
[ 10%] Linking CXX executable ../../bin/test_basic_math
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_math.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o -o ../../bin/test_basic_math  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 10%] Built target test_basic_math
make  -f tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build.make tests/basic/CMakeFiles/test_basic_smart_pointer.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_smart_pointer.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build.make tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 11%] Building CXX object tests/basic/CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o -MF CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o.d -o CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_smart_pointer.cpp
[ 11%] Linking CXX executable ../../bin/test_bam_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bam_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bam_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o -o ../../bin/test_bam_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f tests/basic/CMakeFiles/test_basic_container.dir/build.make tests/basic/CMakeFiles/test_basic_container.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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[ 11%] Building CXX object tests/basic/CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o -MF CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o.d -o CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_container.cpp
[ 11%] Linking CXX executable ../../bin/test_basic_container
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_container.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o -o ../../bin/test_basic_container  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 11%] Built target test_basic_container
make  -f tests/basic/CMakeFiles/test_basic_proxy.dir/build.make tests/basic/CMakeFiles/test_basic_proxy.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_proxy.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_proxy.dir/build.make tests/basic/CMakeFiles/test_basic_proxy.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 11%] Building CXX object tests/basic/CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o -MF CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o.d -o CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_proxy.cpp
[ 11%] Linking CXX executable ../../bin/test_basic_smart_pointer
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_smart_pointer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o -o ../../bin/test_basic_smart_pointer  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 11%] Built target test_basic_smart_pointer
make  -f tests/basic/CMakeFiles/test_basic_iterator.dir/build.make tests/basic/CMakeFiles/test_basic_iterator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_iterator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_iterator.dir/build.make tests/basic/CMakeFiles/test_basic_iterator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Building CXX object tests/basic/CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/basic/CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o -MF CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o.d -o CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_iterator.cpp
[ 12%] Linking CXX executable ../../bin/test_basic_proxy
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_proxy.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o -o ../../bin/test_basic_proxy  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Built target test_basic_proxy
make  -f tests/bed_io/CMakeFiles/test_bed_io.dir/build.make tests/bed_io/CMakeFiles/test_bed_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bed_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bed_io/CMakeFiles/test_bed_io.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/bed_io/CMakeFiles/test_bed_io.dir/build.make tests/bed_io/CMakeFiles/test_bed_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Building CXX object tests/bed_io/CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bed_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/bed_io/CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o -MF CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o.d -o CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io/test_bed_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_iterator.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_iterator.h: In instantiation of 'void SEQAN_TEST_test_basic_iterator_position_arithmetics() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_iterator.cpp:71:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_iterator.h:1149:9: warning: implicitly-declared 'constexpr seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
 1149 |     it2 = it - 2;
      |     ~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_iterator.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = int*]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_iterator.h:1152:9: warning: implicitly-declared 'constexpr seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
 1152 |     it2 = it + 2;
      |     ~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = int*]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Iter<int*, CountingIteratorImpl_<Tag<Nothing_> > >; TSource = Iter<int*, CountingIteratorImpl_<Tag<Nothing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_iterator.h:1000:15:   required from 'void SEQAN_TEST_test_basic_iterator_position_transport() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic/test_basic_iterator.cpp:68:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'constexpr seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<int*, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = int*]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io/test_bed_io.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io/test_bed_io.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io/test_bed_io.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Bed_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io/test_bed_io.cpp:390:22:   required from 'void SEQAN_TEST_test_bed_bed_file_read() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io/test_bed_io.cpp:492:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Bed_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io/test_bed_io.cpp:390:22:   required from 'void SEQAN_TEST_test_bed_bed_file_read() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io/test_bed_io.cpp:492:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 12%] Linking CXX executable ../../bin/test_basic_iterator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_iterator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o -o ../../bin/test_basic_iterator  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Built target test_basic_iterator
make  -f tests/blast/CMakeFiles/test_blast.dir/build.make tests/blast/CMakeFiles/test_blast.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/blast /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/blast/CMakeFiles/test_blast.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/blast/CMakeFiles/test_blast.dir/build.make tests/blast/CMakeFiles/test_blast.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Building CXX object tests/blast/CMakeFiles/test_blast.dir/test_blast.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/blast && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/blast/CMakeFiles/test_blast.dir/test_blast.cpp.o -MF CMakeFiles/test_blast.dir/test_blast.cpp.o.d -o CMakeFiles/test_blast.dir/test_blast.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = BlastTabular_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<BlastTabular_>; TDirection = Tag<Input_>; TSpec = BlastIOContext<>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::BlastTabular_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::BlastIOContext<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_input.h:166:34:   required from 'void _testReadTabularWithoutComments(TContext&, std::string, bool, bool) [with TContext = seqan::BlastIOContext<>; std::string = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_input.h:327:36:   required from 'void SEQAN_TEST_test_blast_read_tabular_without_comments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:85:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = BlastTabular_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<BlastTabular_>; TDirection = Tag<Input_>; TSpec = BlastIOContext<>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::BlastTabular_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::BlastIOContext<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_input.h:166:34:   required from 'void _testReadTabularWithoutComments(TContext&, std::string, bool, bool) [with TContext = seqan::BlastIOContext<>; std::string = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_input.h:327:36:   required from 'void SEQAN_TEST_test_blast_read_tabular_without_comments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:85:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_record.h: In instantiation of 'seqan::BlastMatch<TAlignRow0_, TAlignRow1_, TPos_, TQId_, TSId_, TSAccs_, TSTaxIds_>::BlastMatch(const TQId&, const TSId&) [with TAlignRow0_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >; TAlignRow1_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >; TPos_ = unsigned int; TQId_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSId_ = seqan::String<char, seqan::Alloc<> >; TSAccs_ = std::vector<std::__cxx11::basic_string<char> >; TSTaxIds_ = seqan::String<unsigned int, seqan::Alloc<> >; TQId = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSId = seqan::String<char, seqan::Alloc<> >]':
/usr/include/c++/13/bits/new_allocator.h:191:4:   required from 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > >; _Args = {seqan::Segment<seqan::String<char, seqan::Alloc<void> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<void> >&}; _Tp = std::_List_node<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > >]'
/usr/include/c++/13/bits/alloc_traits.h:538:17:   required from 'static void std::allocator_traits<std::allocator<_CharT> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > >; _Args = {seqan::Segment<seqan::String<char, seqan::Alloc<void> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<void> >&}; _Tp = std::_List_node<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > >; allocator_type = std::allocator<std::_List_node<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > > >]'
/usr/include/c++/13/bits/stl_list.h:713:33:   required from 'std::__cxx11::list<_Tp, _Alloc>::_Node* std::__cxx11::list<_Tp, _Alloc>::_M_create_node(_Args&& ...) [with _Args = {seqan::Segment<seqan::String<char, seqan::Alloc<void> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<void> >&}; _Tp = seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > >; _Alloc = std::allocator<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > >; _Node = std::__cxx11::list<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > >, std::allocator<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > > >::_Node]'
/usr/include/c++/13/bits/stl_list.h:2005:32:   required from 'void std::__cxx11::list<_Tp, _Alloc>::_M_insert(iterator, _Args&& ...) [with _Args = {seqan::Segment<seqan::String<char, seqan::Alloc<void> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<void> >&}; _Tp = seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > >; _Alloc = std::allocator<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > >; iterator = std::__cxx11::list<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > >, std::allocator<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > > >::iterator]'
/usr/include/c++/13/bits/stl_list.h:1321:19:   required from 'std::__cxx11::list<_Tp, _Alloc>::reference std::__cxx11::list<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {seqan::Segment<seqan::String<char, seqan::Alloc<void> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<void> >&}; _Tp = seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > >; _Alloc = std::allocator<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > >; reference = seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:161:44:   required from 'void _testBlastOutputGenerateContent(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastTabularLL_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:497:36:   required from 'void _testBlastOutput(seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastTabularLL_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:514:21:   required from 'void SEQAN_TEST_test_blast_write_lowlevel() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:63:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_record.h:204:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  204 |         qId(_qId), sId(_sId)
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, PrefixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, PrefixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:596:14:   required from 'void seqan::_writeMatchOneLiner(TStream&, BlastIOContext<TScore, p, h>&, const BlastMatch<TAlignRow0, TAlignRow1, TPos, TQId, TSId>&, const BlastReport&) [with TStream = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TQId = Segment<String<char, Alloc<> >, InfixSegment>; TSId = String<char, Alloc<> >; TPos = unsigned int; TAlignRow0 = Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TAlignRow1 = Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC; BlastReport = Tag<BlastReport_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:715:32:   required from 'void seqan::writeRecord(TStream&, BlastIOContext<TScore, p, h>&, const BlastRecord<TSpecs ...>&, const BlastReport&) [with TStream = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<void> >, InfixSegment>, String<char, Alloc<void> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, Segment<String<char, Alloc<void> >, InfixSegment>, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC; BlastReport = Tag<BlastReport_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:736:16:   required from 'void seqan::writeRecord(BlastReportFileOut<TContext>&, const BlastRecord<TSpecs ...>&) [with TContext = BlastIOContext<>; TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<void> >, InfixSegment>, String<char, Alloc<void> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, Segment<String<char, Alloc<void> >, InfixSegment>, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; BlastReportFileOut<TContext> = FormattedFile<Tag<BlastReport_>, Tag<Output_>, BlastIOContext<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:52:20:   required from 'void _testBlastOutputWriteFile(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TRecords&, const seqan::BlastReport&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TRecords = seqan::String<seqan::BlastRecord<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > > >; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC; seqan::BlastReport = seqan::Tag<seqan::BlastReport_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:192:30:   required from 'void _testBlastOutputGenerateContent(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastReport_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:497:36:   required from 'void _testBlastOutput(seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastReport_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:634:21:   required from 'void SEQAN_TEST_test_blast_write_report() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:78:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:551:14:   required from 'void seqan::_writeFullMatch(TStream&, BlastIOContext<TScore, p, h>&, const BlastMatch<TAlignRow0, TAlignRow1, TPos, TQId, TSId>&, const BlastReport&) [with TStream = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TQId = Segment<String<char, Alloc<> >, InfixSegment>; TSId = String<char, Alloc<> >; TPos = unsigned int; TAlignRow0 = Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TAlignRow1 = Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC; BlastReport = Tag<BlastReport_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:720:28:   required from 'void seqan::writeRecord(TStream&, BlastIOContext<TScore, p, h>&, const BlastRecord<TSpecs ...>&, const BlastReport&) [with TStream = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<void> >, InfixSegment>, String<char, Alloc<void> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, Segment<String<char, Alloc<void> >, InfixSegment>, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC; BlastReport = Tag<BlastReport_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:736:16:   required from 'void seqan::writeRecord(BlastReportFileOut<TContext>&, const BlastRecord<TSpecs ...>&) [with TContext = BlastIOContext<>; TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<void> >, InfixSegment>, String<char, Alloc<void> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, Segment<String<char, Alloc<void> >, InfixSegment>, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; BlastReportFileOut<TContext> = FormattedFile<Tag<BlastReport_>, Tag<Output_>, BlastIOContext<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:52:20:   required from 'void _testBlastOutputWriteFile(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TRecords&, const seqan::BlastReport&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TRecords = seqan::String<seqan::BlastRecord<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > > >; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC; seqan::BlastReport = seqan::Tag<seqan::BlastReport_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:192:30:   required from 'void _testBlastOutputGenerateContent(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastReport_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:497:36:   required from 'void _testBlastOutput(seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastReport_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:634:21:   required from 'void SEQAN_TEST_test_blast_write_report() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:78:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_record.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::BlastRecord<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > >*; TParam = seqan::BlastRecord<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > >*; TParam = BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > >*; TSource1 = BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > >*; TSource2 = BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > >*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > >; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1785:50:   required from 'typename seqan::Size<seqan::String<TValue, TSpec> >::Type seqan::resize(String<TValue, TSpec>&, TSize, Tag<TUsage>) [with TValue = BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > >; TSpec = Alloc<>; TSize = int; TExpand = TagGenerous_; typename Size<String<TValue, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = String<BlastRecord<BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<> >, InfixSegment>, String<char, Alloc<> > > > >&; TSize = int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:145:11:   required from 'void _testBlastOutputGenerateContent(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastTabularLL_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:497:36:   required from 'void _testBlastOutput(seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastTabularLL_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:514:21:   required from 'void SEQAN_TEST_test_blast_write_lowlevel() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:63:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_record.h:378:8: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  378 | struct BlastRecord
      |        ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::BlastRecord<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > >::BlastRecord(seqan::BlastRecord<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, PrefixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, PrefixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:596:14:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:736:16:   required from 'void seqan::writeRecord(BlastReportFileOut<TContext>&, const BlastRecord<TSpecs ...>&) [with TContext = BlastIOContext<>; TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<void> >, InfixSegment>, String<char, Alloc<void> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, Segment<String<char, Alloc<void> >, InfixSegment>, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; BlastReportFileOut<TContext> = FormattedFile<Tag<BlastReport_>, Tag<Output_>, BlastIOContext<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:52:20:   required from 'void _testBlastOutputWriteFile(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TRecords&, const seqan::BlastReport&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TRecords = seqan::String<seqan::BlastRecord<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > > >; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC; seqan::BlastReport = seqan::Tag<seqan::BlastReport_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:192:30:   required from 'void _testBlastOutputGenerateContent(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastReport_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:497:36:   required from 'void _testBlastOutput(seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastReport_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:634:21:   required from 'void SEQAN_TEST_test_blast_write_report() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:78:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:551:14:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_report_out.h:736:16:   required from 'void seqan::writeRecord(BlastReportFileOut<TContext>&, const BlastRecord<TSpecs ...>&) [with TContext = BlastIOContext<>; TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, Segment<String<char, Alloc<void> >, InfixSegment>, String<char, Alloc<void> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, Segment<String<char, Alloc<void> >, InfixSegment>, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; BlastReportFileOut<TContext> = FormattedFile<Tag<BlastReport_>, Tag<Output_>, BlastIOContext<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:52:20:   required from 'void _testBlastOutputWriteFile(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TRecords&, const seqan::BlastReport&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TRecords = seqan::String<seqan::BlastRecord<seqan::BlastMatch<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, unsigned int, seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::String<char, seqan::Alloc<> > > > >; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC; seqan::BlastReport = seqan::Tag<seqan::BlastReport_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:192:30:   required from 'void _testBlastOutputGenerateContent(TFile&, seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TFile = std::basic_fstream<char>; TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastReport_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:497:36:   required from 'void _testBlastOutput(seqan::BlastIOContext<TScore, p, h>&, const TFormat&) [with TScore = seqan::Score<int, seqan::ScoreMatrix<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Blosum62_> >; TFormat = seqan::Tag<seqan::BlastReport_>; seqan::BlastProgram p = seqan::BlastProgram::DYNAMIC; seqan::BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast_output.h:634:21:   required from 'void SEQAN_TEST_test_blast_write_report() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast/test_blast.cpp:78:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 12%] Linking CXX executable ../../bin/test_bed_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bed_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bed_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o -o ../../bin/test_bed_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Built target test_bed_io
make  -f tests/consensus/CMakeFiles/test_consensus.dir/build.make tests/consensus/CMakeFiles/test_consensus.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus/CMakeFiles/test_consensus.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/consensus/CMakeFiles/test_consensus.dir/build.make tests/consensus/CMakeFiles/test_consensus.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Building CXX object tests/consensus/CMakeFiles/test_consensus.dir/test_consensus.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/consensus/CMakeFiles/test_consensus.dir/test_consensus.cpp.o -MF CMakeFiles/test_consensus.dir/test_consensus.cpp.o.d -o CMakeFiles/test_consensus.dir/test_consensus.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.h:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:67:19:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h: In instantiation of 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:404:32: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  404 |             for (TReadGapsIter itR2 = itR; itR2 != itREnd; ++itR2)
      |                                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:67:19:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:67:19:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:67:19:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:67:19:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Standard_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:395:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:280:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = unsigned int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:930:19:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::_endContig(unsigned int) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:697:5:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:56:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:513:15:   required from 'void seqan::insertGap(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >; TPosition = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1610:30:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_updateAlignments(unsigned int, unsigned int&, TProfileString&, seqan::Gaps<seqan::String<seqan::ProfileChar<typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type> > >&, seqan::Gaps<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>&, seqan::ExtractProfileInfo_&, const seqan::WindowClippingInfo_&, const TAlignedReadIter&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5_>; typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5Q_>; typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; typename TFragmentStore::TReadSeqStore = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TAlignedReadIter = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1321:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:53:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:17:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:427:10:   required from 'void seqan::assignSource(Gaps<TSequence, Tag<ArrayGaps_> >&, const TSequence2&) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequence2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1163:21:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:53:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:382:27:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus_realign.h:63:16:   required from 'void SEQAN_TEST_test_consensus_realign_one_contig_small() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus/test_consensus.cpp:40:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = std::__cxx11::basic_string<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = std::__cxx11::basic_string<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = Segment<std::__cxx11::basic_string<char>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::Segment<std::__cxx11::basic_string<char>, seqan::InfixSegment>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = std::__cxx11::basic_string<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:68:
In member function 'constexpr const std::array<_Tp, _Nm>::value_type& std::array<_Tp, _Nm>::operator[](size_type) const [with _Tp = const seqan::BlastMatchField<>::Enum; long unsigned int _Nm = 12]',
    inlined from 'void seqan::_readCommentLinesImpl(BlastRecord<TSpecs ...>&, TFwdIterator&, BlastIOContext<TScore, p, h>&, const BlastTabular&) [with TSpecs = {BlastMatch<Gaps<String<char, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<char, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_tabular_in.h:345:74:
/usr/include/c++/13/array:213:24: warning: array subscript 12 is above array bounds of 'std::__array_traits<const seqan::BlastMatchField<>::Enum, 12>::_Type' {aka 'const seqan::BlastMatchField<>::Enum [12]'} [-Warray-bounds=]
  213 |         return _M_elems[__n];
      |                ~~~~~~~~^
/usr/include/c++/13/array: In function 'void seqan::_readCommentLinesImpl(BlastRecord<TSpecs ...>&, TFwdIterator&, BlastIOContext<TScore, p, h>&, const BlastTabular&) [with TSpecs = {BlastMatch<Gaps<String<char, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<char, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]':
/usr/include/c++/13/array:109:55: note: while referencing 'std::array<const seqan::BlastMatchField<>::Enum, 12>::_M_elems'
  109 |       typename __array_traits<_Tp, _Nm>::_Type        _M_elems;
      |                                                       ^~~~~~~~
In member function 'constexpr const std::array<_Tp, _Nm>::value_type& std::array<_Tp, _Nm>::operator[](size_type) const [with _Tp = const seqan::BlastMatchField<>::Enum; long unsigned int _Nm = 12]',
    inlined from 'void seqan::_readCommentLinesImpl(BlastRecord<TSpecs ...>&, TFwdIterator&, BlastIOContext<TScore, p, h>&, const BlastTabular&) [with TSpecs = {BlastMatch<Gaps<String<char, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<char, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_tabular_in.h:345:74:
/usr/include/c++/13/array:213:24: warning: array subscript 12 is above array bounds of 'std::__array_traits<const seqan::BlastMatchField<>::Enum, 12>::_Type' {aka 'const seqan::BlastMatchField<>::Enum [12]'} [-Warray-bounds=]
  213 |         return _M_elems[__n];
      |                ~~~~~~~~^
/usr/include/c++/13/array: In function 'void seqan::_readCommentLinesImpl(BlastRecord<TSpecs ...>&, TFwdIterator&, BlastIOContext<TScore, p, h>&, const BlastTabular&) [with TSpecs = {BlastMatch<Gaps<String<char, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<char, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; BlastProgram p = seqan::BlastProgram::BLASTX; BlastTabularSpec h = seqan::BlastTabularSpec::COMMENTS]':
/usr/include/c++/13/array:109:55: note: while referencing 'std::array<const seqan::BlastMatchField<>::Enum, 12>::_M_elems'
  109 |       typename __array_traits<_Tp, _Nm>::_Type        _M_elems;
      |                                                       ^~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 12%] Linking CXX executable ../../bin/test_blast
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/blast && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_blast.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_blast.dir/test_blast.cpp.o -o ../../bin/test_blast  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Built target test_blast
make  -f tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build.make tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus_v2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build.make tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Building CXX object tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus_v2 && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o -MF CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o.d -o CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 12%] Linking CXX executable ../../bin/test_consensus
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_consensus.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_consensus.dir/test_consensus.cpp.o -o ../../bin/test_consensus  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Built target test_consensus
make  -f tests/find/CMakeFiles/test_find.dir/build.make tests/find/CMakeFiles/test_find.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/find /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/find /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/find/CMakeFiles/test_find.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/find/CMakeFiles/test_find.dir/build.make tests/find/CMakeFiles/test_find.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Building CXX object tests/find/CMakeFiles/test_find.dir/test_find.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/find && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/find/CMakeFiles/test_find.dir/test_find.cpp.o -MF CMakeFiles/test_find.dir/test_find.cpp.o.d -o CMakeFiles/test_find.dir/test_find.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:54:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:90:19:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:90:19:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:90:19:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h: In instantiation of 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:404:32: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  404 |             for (TReadGapsIter itR2 = itR; itR2 != itREnd; ++itR2)
      |                                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:90:19:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::__cxx11::basic_stringstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::__cxx11::basic_stringstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:90:19:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:223:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:370:17:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:969:48:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Standard_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:395:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:932:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:941:46:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:136:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, FractionalScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; FractionalScore = const Tag<FractionalScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:272:24:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, const TScore&, ReScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; TScore = Score<int, Tag<Simple_> >; ReScore = const Tag<ReScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:384:24:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:295:23:   required from 'bool seqan::alignmentGraphToFragmentStore(TFragmentStore&, const Graph<Alignment<StringSet<TSequence, TSetSpec>, TCargo, TSpec> >&, const Graph<Undirected<double> >&, const String<unsigned int, Alloc<> >&, const String<unsigned int, Alloc<> >&, unsigned int, bool) [with TFragmentStore = FragmentStore<>; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TCargo = unsigned int; TSetSpec = Dependent<Tag<TagInsist_> >; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:427:34:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:280:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = unsigned int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:930:19:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::_endContig(unsigned int) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:697:5:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:56:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:513:15:   required from 'void seqan::insertGap(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >; TPosition = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1610:30:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_updateAlignments(unsigned int, unsigned int&, TProfileString&, seqan::Gaps<seqan::String<seqan::ProfileChar<typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type> > >&, seqan::Gaps<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>&, seqan::ExtractProfileInfo_&, const seqan::WindowClippingInfo_&, const TAlignedReadIter&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5_>; typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5Q_>; typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; typename TFragmentStore::TReadSeqStore = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TAlignedReadIter = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1321:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TValue2 = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Pigeonhole<>; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:463:41:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:17:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:382:27:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:78:23:   required from 'void SEQAN_TEST_test_consensus_consensus_alignment_coordinates() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2/test_consensus_v2.cpp:298:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:53:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<char, Alloc<> >, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_multiple_bfam.h:331:53:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, MultiBfam<TSpec> >&) [with TFinder = Finder<String<char, Alloc<> > >; TAutomaton = Oracle; TNeedle = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:446:13:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<char, Alloc<> > >; TNeedle = String<char, Alloc<> >; TMultiFinder = MultiBfam<Oracle>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:923:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::MultiBfam<seqan::Oracle> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1354:62:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical_multi_bfam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1925:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_multiple_bfam.h:331:53:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, MultiBfam<TSpec> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAutomaton = Oracle; TNeedle = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:446:13:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TMultiFinder = MultiBfam<Oracle>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:990:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::MultiBfam<seqan::Oracle> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1354:62:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical_multi_bfam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1925:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:425:15:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<char, Alloc<> > >; TNeedle = String<char, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:923:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = void; typename Parameter_<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<char, Alloc<> >, InfixSegment>, void>; TNeedle = String<char, Alloc<> >; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1625:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<char, Alloc<> >, InfixSegment>, void>; TNeedle = String<char, Alloc<> >; TSpec = FindInfix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:427:15:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<char, Alloc<> > >; TNeedle = String<char, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:923:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:425:15:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:990:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = void; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, void>; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1625:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, void>; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FindInfix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:427:15:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:990:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<char, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = Segment<String<char, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >&; TSource = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:355:16:   required from 'void seqan::_patternInit(Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&, TFinder&) [with TNeedle = String<char, Alloc<> >; TFinder = Finder<String<char, Alloc<> > >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:412:18:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<char, Alloc<> > >; TNeedle = String<char, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:923:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:355:16:   required from 'void seqan::_patternInit(Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&, TFinder&) [with TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:412:18:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:990:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<char, Alloc<> >, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>; TIntegral = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_multiple_bfam.h:331:53:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, MultiBfam<TSpec> >&) [with TFinder = Finder<String<char, Alloc<> > >; TAutomaton = Oracle; TNeedle = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:446:13:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<char, Alloc<> > >; TNeedle = String<char, Alloc<> >; TMultiFinder = MultiBfam<Oracle>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:923:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::MultiBfam<seqan::Oracle> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1354:62:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical_multi_bfam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1925:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:497:15:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(T&) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_multiple_bfam.h:332:42:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, MultiBfam<TSpec> >&) [with TFinder = Finder<String<char, Alloc<> > >; TAutomaton = Oracle; TNeedle = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:446:13:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<char, Alloc<> > >; TNeedle = String<char, Alloc<> >; TMultiFinder = MultiBfam<Oracle>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:923:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::MultiBfam<seqan::Oracle> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1354:62:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical_multi_bfam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1925:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_multiple_bfam.h:331:53:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, MultiBfam<TSpec> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAutomaton = Oracle; TNeedle = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:446:13:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TMultiFinder = MultiBfam<Oracle>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:990:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::MultiBfam<seqan::Oracle> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1354:62:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical_multi_bfam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1925:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:497:15:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(T&) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_multiple_bfam.h:332:42:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, MultiBfam<TSpec> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAutomaton = Oracle; TNeedle = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:446:13:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TMultiFinder = MultiBfam<Oracle>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:990:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::MultiBfam<seqan::Oracle> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1354:62:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical_multi_bfam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1925:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:66:64:   required from 'void seqan::_addStringToTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = char; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TKeyword = Segment<const String<char, Alloc<> >, SuffixSegment>; TPos = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:196:25:   required from 'void seqan::createSuffixTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TText&) [with TAlphabet = char; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TText = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_bom.h:161:21:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Bfam<Trie> >&) [with TNeedle = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = String<char, Alloc<> >; TSpec = Bfam<Trie>; TNeedle2 = String<char, Alloc<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:102:12:   required from 'void Test_OnlineAlg() [with TAlgorithmSpec = seqan::Bfam<seqan::Trie>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1255:32:   required from 'void SEQAN_TEST_test_find_online_BFAM_Trie() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1905:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:66:64:   required from 'void seqan::_addStringToTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType<unsigned char, Dna_>; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TKeyword = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TPos = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:196:25:   required from 'void seqan::createSuffixTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TText&) [with TAlphabet = SimpleType<unsigned char, Dna_>; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_bom.h:161:21:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Bfam<Trie> >&) [with TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Bfam<Trie>; TNeedle2 = String<SimpleType<unsigned char, Dna_>, Alloc<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1738:16:   required from 'void test_pattern_set_host() [with TPatternSpec = seqan::Bfam<seqan::Trie>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1868:39:   required from 'void SEQAN_TEST_test_pattern_set_host() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1934:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h: In instantiation of 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<char, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::Myers<> >; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<char, Alloc<> >, PrefixSegment>, Myers<> >; TNeedle = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   required from 'void seqan::_patternFirstInit(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, TNeedle2&) [with TNeedle = Segment<String<char, Alloc<> >, PrefixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>; TNeedle2 = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:660:22:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&) [with TNeedle = Segment<String<char, Alloc<> >, PrefixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<char, Alloc<> >, PrefixSegment>; TSpec = Myers<>; TNeedle2 = const Segment<String<char, Alloc<> >, PrefixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1566:50:   required from 'void test_find_on_segments_Helper(TString&, const TSegmentOrString&) [with TString = seqan::String<char, seqan::Alloc<> >; TSegmentOrString = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1590:35:   required from 'void SEQAN_TEST_test_find_on_segments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1889:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  625 |     return ModifiedString<THost, ModReverse>(host);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h: In instantiation of 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Myers<> >; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<char, Alloc<> >, InfixSegment>, Myers<> >; TNeedle = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   required from 'void seqan::_patternFirstInit(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, TNeedle2&) [with TNeedle = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>; TNeedle2 = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:660:22:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&) [with TNeedle = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Myers<>; TNeedle2 = const Segment<String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1566:50:   required from 'void test_find_on_segments_Helper(TString&, const TSegmentOrString&) [with TString = seqan::String<char, seqan::Alloc<> >; TSegmentOrString = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1594:35:   required from 'void SEQAN_TEST_test_find_on_segments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1889:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  625 |     return ModifiedString<THost, ModReverse>(host);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h: In instantiation of 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>, seqan::Myers<> >; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<char, Alloc<> >, SuffixSegment>, Myers<> >; TNeedle = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   required from 'void seqan::_patternFirstInit(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, TNeedle2&) [with TNeedle = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>; TNeedle2 = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:660:22:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&) [with TNeedle = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = Myers<>; TNeedle2 = const Segment<String<char, Alloc<> >, SuffixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1566:50:   required from 'void test_find_on_segments_Helper(TString&, const TSegmentOrString&) [with TString = seqan::String<char, seqan::Alloc<> >; TSegmentOrString = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1598:35:   required from 'void SEQAN_TEST_test_find_on_segments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1889:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  625 |     return ModifiedString<THost, ModReverse>(host);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<char, Alloc<> >, InfixSegment>*; TParam = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<char, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = Segment<String<char, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >&; TSource = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:355:16:   required from 'void seqan::_patternInit(Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&, TFinder&) [with TNeedle = String<char, Alloc<> >; TFinder = Finder<String<char, Alloc<> > >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:412:18:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<char, Alloc<> > >; TNeedle = String<char, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:923:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:355:16:   required from 'void seqan::_patternInit(Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&, TFinder&) [with TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:412:18:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:990:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:66:64:   required from 'void seqan::_addStringToTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = char; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TKeyword = Segment<const String<char, Alloc<> >, SuffixSegment>; TPos = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:196:25:   required from 'void seqan::createSuffixTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TText&) [with TAlphabet = char; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TText = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_bom.h:161:21:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Bfam<Trie> >&) [with TNeedle = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = String<char, Alloc<> >; TSpec = Bfam<Trie>; TNeedle2 = String<char, Alloc<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:102:12:   required from 'void Test_OnlineAlg() [with TAlgorithmSpec = seqan::Bfam<seqan::Trie>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1255:32:   required from 'void SEQAN_TEST_test_find_online_BFAM_Trie() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1905:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:66:64:   required from 'void seqan::_addStringToTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType<unsigned char, Dna_>; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TKeyword = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TPos = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:196:25:   required from 'void seqan::createSuffixTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TText&) [with TAlphabet = SimpleType<unsigned char, Dna_>; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_bom.h:161:21:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Bfam<Trie> >&) [with TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Bfam<Trie>; TNeedle2 = String<SimpleType<unsigned char, Dna_>, Alloc<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1738:16:   required from 'void test_pattern_set_host() [with TPatternSpec = seqan::Bfam<seqan::Trie>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1868:39:   required from 'void SEQAN_TEST_test_pattern_set_host() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1934:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>*; TParam = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<char, Alloc<> >, PrefixSegment>*; TParam = const Segment<String<char, Alloc<> >, PrefixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<char, Alloc<> >, PrefixSegment>, Tag<Tristate_> >; TValue = Segment<String<char, Alloc<> >, PrefixSegment>; typename Value<TContext>::Type = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<char, Alloc<> >, PrefixSegment>; TValue2 = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<char, Alloc<> >, PrefixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<char, Alloc<> >, PrefixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:840:14:   required from 'void seqan::setValue(Holder<TValue, Tag<Tristate_> >&, const TValue2&) [with TValue = Segment<String<char, Alloc<> >, PrefixSegment>; TValue2 = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:254:13:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<char, Alloc<> >, PrefixSegment>; TSpec = Myers<>; TNeedle2 = const Segment<String<char, Alloc<> >, PrefixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1566:50:   required from 'void test_find_on_segments_Helper(TString&, const TSegmentOrString&) [with TString = seqan::String<char, seqan::Alloc<> >; TSegmentOrString = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1590:35:   required from 'void SEQAN_TEST_test_find_on_segments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1889:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12:   required from 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::Myers<> >; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<char, Alloc<> >, PrefixSegment>, Myers<> >; TNeedle = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   required from 'void seqan::_patternFirstInit(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, TNeedle2&) [with TNeedle = Segment<String<char, Alloc<> >, PrefixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>; TNeedle2 = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:660:22:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&) [with TNeedle = Segment<String<char, Alloc<> >, PrefixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<char, Alloc<> >, PrefixSegment>; TSpec = Myers<>; TNeedle2 = const Segment<String<char, Alloc<> >, PrefixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1566:50:   required from 'void test_find_on_segments_Helper(TString&, const TSegmentOrString&) [with TString = seqan::String<char, seqan::Alloc<> >; TSegmentOrString = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1590:35:   required from 'void SEQAN_TEST_test_find_on_segments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1889:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<char, Alloc<> >, InfixSegment>*; TParam = const Segment<String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<char, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<char, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<char, Alloc<> >, InfixSegment>; TValue2 = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<char, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:840:14:   required from 'void seqan::setValue(Holder<TValue, Tag<Tristate_> >&, const TValue2&) [with TValue = Segment<String<char, Alloc<> >, InfixSegment>; TValue2 = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:254:13:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Myers<>; TNeedle2 = const Segment<String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1566:50:   required from 'void test_find_on_segments_Helper(TString&, const TSegmentOrString&) [with TString = seqan::String<char, seqan::Alloc<> >; TSegmentOrString = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1594:35:   required from 'void SEQAN_TEST_test_find_on_segments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1889:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>*; TParam = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<char, Alloc<> >, SuffixSegment>*; TParam = const Segment<String<char, Alloc<> >, SuffixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<char, Alloc<> >, SuffixSegment>, Tag<Tristate_> >; TValue = Segment<String<char, Alloc<> >, SuffixSegment>; typename Value<TContext>::Type = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<char, Alloc<> >, SuffixSegment>; TValue2 = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<char, Alloc<> >, SuffixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<char, Alloc<> >, SuffixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:840:14:   required from 'void seqan::setValue(Holder<TValue, Tag<Tristate_> >&, const TValue2&) [with TValue = Segment<String<char, Alloc<> >, SuffixSegment>; TValue2 = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:254:13:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = Myers<>; TNeedle2 = const Segment<String<char, Alloc<> >, SuffixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1566:50:   required from 'void test_find_on_segments_Helper(TString&, const TSegmentOrString&) [with TString = seqan::String<char, seqan::Alloc<> >; TSegmentOrString = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1598:35:   required from 'void SEQAN_TEST_test_find_on_segments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1889:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:625:12:   required from 'seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> > seqan::reverseString(THost&) [with THost = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:212:61:   required from 'static void seqan::FindBeginImpl_<seqan::Myers<seqan::FindPrefix, THasState, void> >::_findBeginInit(TPattern&, TNeedle&) [with TPattern = seqan::Pattern<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>, seqan::Myers<> >; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; THasState = seqan::True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_begin.h:330:65:   required from 'void seqan::_findBeginInit(TPattern&, TNeedle&) [with TPattern = Pattern<Segment<String<char, Alloc<> >, SuffixSegment>, Myers<> >; TNeedle = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:558:19:   required from 'void seqan::_patternFirstInit(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, TNeedle2&) [with TNeedle = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>; TNeedle2 = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:660:22:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&) [with TNeedle = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = Myers<FindPrefix, True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = Myers<>; TNeedle2 = const Segment<String<char, Alloc<> >, SuffixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:452:16:   required from 'seqan::Pattern<TNeedle, seqan::Myers<TSpec, THasState, TFindBeginPatternSpec> >::Pattern(TNeedle2&&, int) [with TNeedle2 = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&; TNeedle = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TSpec = seqan::FindInfix; THasState = seqan::True; TFindBeginPatternSpec = seqan::Myers<seqan::FindPrefix, seqan::True, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1566:50:   required from 'void test_find_on_segments_Helper(TString&, const TSegmentOrString&) [with TString = seqan::String<char, seqan::Alloc<> >; TSegmentOrString = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1598:35:   required from 'void SEQAN_TEST_test_find_on_segments() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1889:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:66:64:   required from 'void seqan::_addStringToTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TKeyword = Segment<String<char, Alloc<> >, InfixSegment>; TPos = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:121:49:   required from 'void seqan::createTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TKeywords = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_ahocorasick.h:147:15:   required from 'void seqan::_createAcTrie(Pattern<TNeedle, Tag<AhoCorasick_> >&) [with TNeedle = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_ahocorasick.h:209:18:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Tag<AhoCorasick_> >&) [with TNeedle = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >; TSpec = Tag<AhoCorasick_>; TNeedle2 = String<Segment<String<char, Alloc<> >, InfixSegment>, Alloc<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:373:10:   required from 'void seqan::_patternInit(Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&, TFinder&) [with TNeedle = String<char, Alloc<> >; TFinder = Finder<String<char, Alloc<> > >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:412:18:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<char, Alloc<> > >; TNeedle = String<char, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:923:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:66:64:   required from 'void seqan::_addStringToTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType<unsigned char, Dna_>; TCargo = void; TSpec = Tag<Default_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TKeyword = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TPos = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:121:49:   required from 'void seqan::createTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType<unsigned char, Dna_>; TCargo = void; TSpec = Tag<Default_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> >, Alloc<> >; TKeywords = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_ahocorasick.h:147:15:   required from 'void seqan::_createAcTrie(Pattern<TNeedle, Tag<AhoCorasick_> >&) [with TNeedle = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_ahocorasick.h:209:18:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Tag<AhoCorasick_> >&) [with TNeedle = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >; TSpec = Tag<AhoCorasick_>; TNeedle2 = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:373:10:   required from 'void seqan::_patternInit(Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&, TFinder&) [with TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:412:18:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:990:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:463:23:   required from 'void seqan::_arrayConstructCopyDefault(TSource1, TSource2, TTarget) [with TTarget = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>*; TSource1 = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>*; TSource2 = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1023:31:   required from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, False) [with TValueSource = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TValueTarget = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31:   required from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TValueTarget = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31:   required from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TSource = const seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >; TSpec = Tag<AhoCorasick_>; typename Host<Pattern<TNeedle, TSpec> >::Type = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_ahocorasick.h:269:49:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Tag<AhoCorasick_> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pex.h:446:13:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Pex<NonHierarchical, TMultiFinder> >&) [with TFinder = Finder<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TMultiFinder = Tag<AhoCorasick_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:990:5:   required from 'void Test_Approx_EditDist() [with TPatternSpec = seqan::Pex<seqan::NonHierarchical, seqan::Tag<seqan::AhoCorasick_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1339:45:   required from 'void SEQAN_TEST_test_approx_edit_dist_pex_non_hierarchical() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/find/test_find.cpp:1921:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 12%] Linking CXX executable ../../bin/test_consensus_v2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus_v2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_consensus_v2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o -o ../../bin/test_consensus_v2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Built target test_consensus_v2
make  -f tests/gff_io/CMakeFiles/test_gff_io.dir/build.make tests/gff_io/CMakeFiles/test_gff_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/gff_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/gff_io/CMakeFiles/test_gff_io.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/gff_io/CMakeFiles/test_gff_io.dir/build.make tests/gff_io/CMakeFiles/test_gff_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Building CXX object tests/gff_io/CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/gff_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/gff_io/CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o -MF CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o.d -o CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io/test_gff_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io/test_gff_io.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io/test_gff_io.cpp:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io/test_gff_io.h:353:15:   required from 'void SEQAN_TEST_test_store_io_gff_stream_read_record_gff() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io/test_gff_io.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io/test_gff_io.h:353:15:   required from 'void SEQAN_TEST_test_store_io_gff_stream_read_record_gff() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io/test_gff_io.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io/test_gff_io.h:353:15:   required from 'void SEQAN_TEST_test_store_io_gff_stream_read_record_gff() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io/test_gff_io.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 13%] Linking CXX executable ../../bin/test_find
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/find && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_find.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_find.dir/test_find.cpp.o -o ../../bin/test_find  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 13%] Built target test_find
make  -f tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build.make tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_algorithms /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_algorithms /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build.make tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 13%] Building CXX object tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_algorithms && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o -MF CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o.d -o CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_algorithms/test_graph_algorithms.cpp
[ 13%] Linking CXX executable ../../bin/test_gff_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/gff_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_gff_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o -o ../../bin/test_gff_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 13%] Built target test_gff_io
make  -f tests/graph_align/CMakeFiles/test_graph_align.dir/build.make tests/graph_align/CMakeFiles/test_graph_align.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_align/CMakeFiles/test_graph_align.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_align/CMakeFiles/test_graph_align.dir/build.make tests/graph_align/CMakeFiles/test_graph_align.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 13%] Building CXX object tests/graph_align/CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/graph_align/CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o -MF CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o.d -o CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_algorithms/test_graph_algorithms.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/set:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:42:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > > > >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TScore = unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > > > >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:71:20:   required from 'void seqan::SEQAN_TEST_RefineMatchesSelfEdges() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:71:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:189:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:16: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  714 |     best_begin = _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,(top(sw_finder.pQ)).id_), score_);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:748:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  748 |     next_best_begin= _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,next_best_end), score_);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> > >; TValue = seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<String<char, Alloc<> >, Tag<ArrayGaps_> > >&; TSource = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:387:24:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<char, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<char, Alloc<> >, InfixSegment>; TStringV = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:235:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  235 |     finger1 = col_;
      |     ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:253:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  253 |         finger2 = col_;        //points to last column
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:255:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  255 |         finger1 = col_;
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'typename seqan::Iterator<seqan::Matrix<TScoreValue, DIMENSION>, const seqan::Tag<seqan::Standard_> >::Type seqan::_smithWatermanTrace(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix&, Iter<Matrix<TScoreValue, DIMENSION>, CountingIteratorImpl_<Tag<Nothing_> > >, const Score<TScoreValue2, TScoreSpec>&) [with TSourceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; unsigned int DIMENSION = 0; typename Iterator<Matrix<TScoreValue, DIMENSION>, const Tag<Standard_> >::Type = Iter<Matrix<int>, CountingIteratorImpl_<Tag<Nothing_> > >; typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix = String<bool>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:37:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:595:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  595 |             it_ = source_;
      |             ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'void seqan::_smithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, TScoreSpec>&) [with TScoreValue = int; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:736:26:   required from 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:445:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  445 |         finger1 = end_col;        //points to last column
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:447:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  447 |         finger0 = end_col;
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:63:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_align.h: In instantiation of 'TScoreValue seqan::_getRefinedMatchScore(Score<TValue, TSpec>&, TStringSet&, Align<TAliSource, TAliSpec>&, TValue, TValue, TValue, TValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringSet = StringSet<String<char, Alloc<> > >; TAliSource = String<char, Alloc<> >; TAliSpec = Tag<ArrayGaps_>; TValue = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:361:75:   required from 'void seqan::_makeRefinedGraphEdges(TAlignmentString&, TPropertyMap&, TStringSet&, TSeqMap&, TScore&, TAliGraph&, Tag<TagExactRefinement_>) [with TAlignmentString = String<Align<String<char, Alloc<> >, Tag<ArrayGaps_> > >; TStringSet = StringSet<String<char, Alloc<> > >; TSeqMap = std::map<const void*, int>; TPropertyMap = bool; TScore = Score<int, Tag<Simple_> >; TAliGraph = Graph<Alignment<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:422:27:   required from 'void seqan::_makeAlignmentGraphFromRefinedSegments(String<std::set<TValue> >&, TAlignmentString&, TScore&, StringSet<TSequence, TSpec>&, TSeqMap&, TAliGraph&, Tag<TTagSpec>, bool) [with TValue = long unsigned int; TAlignmentString = String<Align<String<char, Alloc<> >, Tag<ArrayGaps_> > >; TScore = Score<int, Tag<Simple_> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAliGraph = Graph<Alignment<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > > > >; TSeqMap = std::map<const void*, int>; TTagSpec = TagExactRefinement_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:643:43:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Align<String<char, Alloc<> >, Tag<ArrayGaps_> > >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > > > >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TScore = Score<int, Tag<Simple_> >; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:664:20:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, Score<TScoreValue, TScoreSpec>&, TOutGraph&) [with TAlignmentString = String<Align<String<char, Alloc<> >, Tag<ArrayGaps_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>; TOutGraph = Graph<Alignment<StringSet<String<char, Alloc<> >, Dependent<Tag<TagInsist_> > > > >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:446:20:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_align.h:133:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  133 |     row0_it = iter(row(segment,0),toViewPosition(row(segment,0),pos_i));
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_align.h:134:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  134 |     row1_it = iter(row(segment,1),toViewPosition(row(segment,1),pos_j));
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<char, Alloc<> >, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<char, Alloc<> >, InfixSegment>; TStringV = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:220:22:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<char, Alloc<> >, InfixSegment>; TStringV = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> > >; TValue = seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<String<char, Alloc<> >, Tag<ArrayGaps_> > >&; TSource = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:387:24:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<char, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >*; TParam = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> > >; TValue = seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<String<char, Alloc<> >, Tag<ArrayGaps_> > >&; TSource = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:387:24:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<char, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:37:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<char, Alloc<> >, InfixSegment>; TStringV = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<char, Alloc<> >, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<char, Alloc<> >, InfixSegment>; TStringV = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:216:33:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<char, Alloc<> >, InfixSegment>; TStringV = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:381:36:   required from 'void seqan::getAlignments(String<TString>&, StringSet<TSequence, TSpec>&, TScore&, int&, int) [with TAlign = Align<String<char, Alloc<> >, Tag<ArrayGaps_> >; TSequence = String<char, Alloc<> >; TSeqSpec = Owner<>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_match_refinement.h:440:18:   required from 'void seqan::SEQAN_TEST_RefineAlign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align/test_graph_align.cpp:74:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
[ 15%] Linking CXX executable ../../bin/test_graph_algorithms
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_algorithms && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_algorithms.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o -o ../../bin/test_graph_algorithms  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Built target test_graph_algorithms
make  -f tests/graph_msa/CMakeFiles/test_graph_msa.dir/build.make tests/graph_msa/CMakeFiles/test_graph_msa.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_msa /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_msa /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_msa/CMakeFiles/test_graph_msa.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_msa/CMakeFiles/test_graph_msa.dir/build.make tests/graph_msa/CMakeFiles/test_graph_msa.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Building CXX object tests/graph_msa/CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_msa && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/graph_msa/CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o -MF CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o.d -o CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_msa/test_graph_msa.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_msa/test_graph_msa.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_msa/test_graph_msa.cpp:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_msa/test_graph_msa.cpp:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<unsigned int, ExactReversableFragment<> > >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, unsigned int> >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = unsigned int; typename Value<TContext>::Type = Fragment<unsigned int, ExactReversableFragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<unsigned int, ExactReversableFragment<> > >; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, unsigned int> >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_msa/test_graph_tcoffee.h:459:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, unsigned int> >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, unsigned int> >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:136:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, FractionalScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; FractionalScore = const Tag<FractionalScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_msa/test_graph_tcoffee.h:320:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
[ 15%] Linking CXX executable ../../bin/test_graph_align
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_align.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o -o ../../bin/test_graph_align  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Built target test_graph_align
make  -f tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o -MF CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o.d -o CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_property_map.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_property_map.cpp:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_property_map.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 15%] Linking CXX executable ../../bin/test_graph_types_property_map
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_property_map.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o -o ../../bin/test_graph_types_property_map  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Built target test_graph_types_property_map
make  -f tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_derived.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_derived.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/graph_types/CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o -MF CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o.d -o CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_derived.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_derived.cpp:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_derived.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<char*, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<char*, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<char*, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<char*, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<char*, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<char*, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:66:64:   required from 'void seqan::_addStringToTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> > >; TKeyword = Segment<char*, SuffixSegment>; TPos = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:196:25:   required from 'void seqan::createSuffixTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TText&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> > >; TText = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_derived.cpp:114:21:   required from 'void SEQAN_TEST_test_graph_types_derived_trie() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_derived.cpp:160:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<char*, seqan::SuffixSegment>::Segment(const seqan::Segment<char*, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<char*, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = char*]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<char*, seqan::SuffixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<char*, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = char*; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<char*, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<char*, seqan::SuffixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<char*, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<char*, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<char*, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<char*, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<char*, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<char*, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<char*, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:66:64:   required from 'void seqan::_addStringToTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> > >; TKeyword = Segment<char*, SuffixSegment>; TPos = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_impl_trie.h:196:25:   required from 'void seqan::createSuffixTrie(Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TTerminalStateMap&, const TText&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TTerminalStateMap = String<String<long unsigned int, Alloc<> > >; TText = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_derived.cpp:114:21:   required from 'void SEQAN_TEST_test_graph_types_derived_trie() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_derived.cpp:160:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<char*, seqan::SuffixSegment>::Segment(const seqan::Segment<char*, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<char*, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = char*]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 15%] Linking CXX executable ../../bin/test_graph_types_derived
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_derived.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o -o ../../bin/test_graph_types_derived  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Built target test_graph_types_derived
make  -f tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o -MF CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o.d -o CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_iterators.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_iterators.cpp:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_iterators.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 15%] Linking CXX executable ../../bin/test_graph_types_iterators
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_iterators.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o -o ../../bin/test_graph_types_iterators  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Built target test_graph_types_iterators
make  -f tests/graph_types/CMakeFiles/test_graph_types_types.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_types.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_types.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_types/CMakeFiles/test_graph_types_types.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_types.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/graph_types/CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o -MF CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o.d -o CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_types.cpp
[ 15%] Linking CXX executable ../../bin/test_graph_msa
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_msa && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_msa.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o -o ../../bin/test_graph_msa  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Built target test_graph_msa
make  -f tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_utils.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_utils.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/graph_types/CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o -MF CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o.d -o CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_utils.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_types.cpp:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_types.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_utils.cpp:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types/test_graph_types_utils.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&, typename seqan::Size<T>::Type) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1032:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, TSize, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TSize = long unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1065:42,
    inlined from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, void>::Type seqan::assign(TTarget&&, TSource&&, typename Size<TContainer>::Type) [with TTarget = String<char, Alloc<> >&; TSource = const char&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:877:11,
    inlined from 'seqan::String<TValue, seqan::Alloc<TSpec> >::String(const TSource&, TSize) [with TSource = char; TSize = long unsigned int; Dummy = void; <template-parameter-2-4> = void; TValue = char; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_alloc.h:171:19,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1242:47,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void seqan::append(TTarget&&, const TSource&) [with TTarget = String<char, Alloc<> >&; TSource = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:903:11,
    inlined from 'void seqan::_createEdgeAttributes(const Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TEdgeAttributes&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TEdgeAttributes = String<String<char, Alloc<> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_drawing.h:274:15:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object '<anonymous>' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_drawing.h: In function 'void seqan::_createEdgeAttributes(const Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TEdgeAttributes&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TEdgeAttributes = String<String<char, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_drawing.h:274:15: note: '<anonymous>' declared here
  274 |         append(tmp, label(itEd));
      |         ~~~~~~^~~~~~~~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void seqan::append(TTarget&&, const TSource&) [with TTarget = String<char, Alloc<> >&; TSource = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:903:11,
    inlined from 'void seqan::_createEdgeAttributes(const Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TEdgeAttributes&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TEdgeAttributes = String<String<char, Alloc<> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_drawing.h:274:15:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object '<anonymous>' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_drawing.h: In function 'void seqan::_createEdgeAttributes(const Graph<Automaton<TAlphabet, TCargo, TSpec> >&, TEdgeAttributes&) [with TAlphabet = char; TCargo = void; TSpec = Tag<Default_>; TEdgeAttributes = String<String<char, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types/graph_drawing.h:274:15: note: '<anonymous>' declared here
  274 |         append(tmp, label(itEd));
      |         ~~~~~~^~~~~~~~~~~~~~~~~~
[ 15%] Linking CXX executable ../../bin/test_graph_types_utils
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_utils.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o -o ../../bin/test_graph_types_utils  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Built target test_graph_types_utils
make  -f tests/index/CMakeFiles/test_index_creation.dir/build.make tests/index/CMakeFiles/test_index_creation.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_creation.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_creation.dir/build.make tests/index/CMakeFiles/test_index_creation.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 15%] Building CXX object tests/index/CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o -MF CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o.d -o CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:62:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseEsa() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:54:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, FunctorConvert<SimpleType<unsigned char, AminoAcid_>, char> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, FunctorConvert<SimpleType<unsigned char, AminoAcid_>, char> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, char> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:88:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringViewEsa() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 16%] Linking CXX executable ../../bin/test_graph_types_types
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_types.dir/link.txt --verbose=1
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:62:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseEsa() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:54:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o -o ../../bin/test_graph_types_types  -lrt -lz -lbz2
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, FunctorConvert<SimpleType<unsigned char, AminoAcid_>, char> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, FunctorConvert<SimpleType<unsigned char, AminoAcid_>, char> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, FunctorConvert<SimpleType<unsigned char, AminoAcid_>, char> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, char> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:88:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringViewEsa() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 16%] Built target test_graph_types_types
make  -f tests/index/CMakeFiles/test_index_crosscompare_char.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_char.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_char.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 16%] Building CXX object tests/index/CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o -MF CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o.d -o CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:143:15:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:143:15:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<unsigned char, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:197:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:143:15:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:143:15:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<unsigned char, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:197:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:197:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:197:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:197:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:143:15:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<unsigned char, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<unsigned char, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:197:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:197:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:280:45:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:280:45:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:280:45:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<unsigned char, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   required from 'seqan::Pipe<TInput, seqan::Skew3>& seqan::Pipe<TInput, seqan::Skew3>::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:626:108:   required from 'void seqan::assign(String<TValue, TSpec>&, Pipe<TInput, TSpec>&) [with TValue = unsigned int; TStringSpec = Alloc<>; TInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:651:15:   required from 'void seqan::operator<<(String<TValue, TSpec>&, Pipe<TInput, TSpec>&) [with TValue = unsigned int; TStringSpec = Alloc<>; TInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:71:21:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<unsigned char, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<unsigned char, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<unsigned char, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<unsigned char, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:75:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseFM() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:440:13:   required from 'seqan::Pipe<TInput, seqan::Skew7>& seqan::Pipe<TInput, seqan::Skew7>::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:626:108:   required from 'void seqan::assign(String<TValue, TSpec>&, Pipe<TInput, TSpec>&) [with TValue = unsigned int; TStringSpec = Alloc<>; TInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:651:15:   required from 'void seqan::operator<<(String<TValue, TSpec>&, Pipe<TInput, TSpec>&) [with TValue = unsigned int; TStringSpec = Alloc<>; TInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:71:21:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:197:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >, Source<> >, Caster<SimpleType<unsigned char, AminoAcid_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:75:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseFM() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >, Source<> >, Caster<SimpleType<unsigned char, AminoAcid_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:75:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseFM() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >, Source<> >, Caster<SimpleType<unsigned char, AminoAcid_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:75:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseFM() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >, Source<> >, Caster<SimpleType<unsigned char, AminoAcid_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:75:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseFM() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >, Source<> >, Caster<SimpleType<unsigned char, AminoAcid_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:75:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseFM() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >, Source<> >, Caster<SimpleType<unsigned char, AminoAcid_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:75:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseFM() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:109:21:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1376:22:   required from 'bool seqan::operator<<(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<long unsigned int, long unsigned int, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >, Skew3>, Filter<_skew3UnslicerFunc<long unsigned int, long unsigned int> > >, Counter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:299:30:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<unsigned int, Alloc<> >; TObject = String<char, Alloc<> >; TAlgSpec = Skew3]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:191:33:   required from 'void seqan::SEQAN_TEST_testIndexCreation() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:59:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, AminoAcid_>, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ModReverse_> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:75:40:   required from 'void seqan::SEQAN_TEST_testIndexModifiedStringReverseFM() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.h:117:16:   required from 'void seqan::SEQAN_TEST_testIssue519() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_creation.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = PreorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TTraits = PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:73:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2310:26:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Postorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = PostorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TTraits = PostorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:73:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:88:65:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:65:49:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:196:47:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareChar() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char.cpp:49:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:65:
In member function 'seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >& seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; unsigned int m = 7; TPack = seqan::Tag<seqan::Pack_>; TPair = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]',
    inlined from 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1330:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:470:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  470 |                         outRef->i2.i[skipped++] = 0;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 7 into destination object 'seqan::Tuple<unsigned char, 7, seqan::Tag<seqan::Pack_> >::i' of size 7
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
[ 16%] Linking CXX executable ../../bin/test_index_crosscompare_char
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_crosscompare_char.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o -o ../../bin/test_index_crosscompare_char  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 16%] Built target test_index_crosscompare_char
make  -f tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 16%] Building CXX object tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o -MF CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o.d -o CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char_dfi.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char_dfi.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char_dfi.cpp:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<Dfi<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexWotd<>; TIndexSpec2 = IndexWotd<Dfi<> >; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexWotd<>; TIndexSpec2 = IndexWotd<Dfi<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:203:54:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareCharDfi() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char_dfi.cpp:50:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<> >; TIndex2 = Index<StringSet<String<char, Alloc<> > >, IndexWotd<Dfi<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexWotd<>; TIndexSpec2 = IndexWotd<Dfi<> >; TText = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:129:45:   required from 'void seqan::crossIndicesChar() [with TIndexSpec1 = IndexWotd<>; TIndexSpec2 = IndexWotd<Dfi<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:203:54:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareCharDfi() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_char_dfi.cpp:50:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 16%] Linking CXX executable ../../bin/test_index_crosscompare_char_dfi
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_crosscompare_char_dfi.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o -o ../../bin/test_index_crosscompare_char_dfi  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 16%] Built target test_index_crosscompare_char_dfi
make  -f tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_dna.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Building CXX object tests/index/CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o -MF CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o.d -o CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:65:
In member function 'seqan::Pipe<TInput, seqan::Sampler<m, TPack> >& seqan::Pipe<TInput, seqan::Sampler<m, TPack> >::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; unsigned int m = 3; TPack = seqan::Tag<seqan::Pack_>]',
    inlined from 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<long unsigned int, Tuple<unsigned char, 3, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3NComp<Pair<long unsigned int, Tuple<unsigned char, 3, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Sampler<3> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1330:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:203:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  203 |                         outRef->i2.i[skipped++] = 0;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<long unsigned int, Tuple<unsigned char, 3, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3NComp<Pair<long unsigned int, Tuple<unsigned char, 3, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Sampler<3> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 3 into destination object 'seqan::Tuple<unsigned char, 3, seqan::Tag<seqan::Pack_> >::i' of size 3
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
In member function 'seqan::Pipe<TInput, seqan::Sampler<m, TPack> >& seqan::Pipe<TInput, seqan::Sampler<m, TPack> >::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; unsigned int m = 3; TPack = seqan::Tag<seqan::Pack_>]',
    inlined from 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<long unsigned int, Tuple<unsigned char, 3, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3NComp<Pair<long unsigned int, Tuple<unsigned char, 3, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Sampler<3> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1330:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:182:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  182 |                         outRef->i2.i[skipped++] = *in;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<long unsigned int, Tuple<unsigned char, 3, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3NComp<Pair<long unsigned int, Tuple<unsigned char, 3, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Sampler<3> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 3 into destination object 'seqan::Tuple<unsigned char, 3, seqan::Tag<seqan::Pack_> >::i' of size 3
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:101:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:101:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Packed<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:216:52:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:101:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = External<ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:217:54:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:101:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = MMap<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:218:50:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:101:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:101:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Packed<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:216:52:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:101:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = External<ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:217:54:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:101:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = MMap<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:218:50:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = PreorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TTraits = PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:73:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:175:45:   required from 'void seqan::crossIndicesDna() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:208:46:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDna() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:52:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2310:26:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Postorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = PostorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TTraits = PostorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:73:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:88:65:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:175:45:   required from 'void seqan::crossIndicesDna() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:208:46:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDna() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:52:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = PreorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TTraits = PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:74:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2310:26:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Postorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = PostorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TTraits = PostorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:74:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:106:65:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = PreorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TTraits = PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:74:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Packed<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:216:52:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2310:26:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Postorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = PostorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TTraits = PostorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:74:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:106:65:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Packed<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:216:52:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = PreorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TTraits = PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:74:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = External<ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:217:54:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2310:26:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Postorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = PostorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TTraits = PostorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:74:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:106:65:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = External<ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:217:54:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = PreorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TTraits = PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:74:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = MMap<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:218:50:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2310:26:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Postorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = PostorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TTraits = PostorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >; TSpec = TopDown<ParentLinks<PostorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:74:15:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PostorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:106:65:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = MMap<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:218:50:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:175:45:   required from 'void seqan::crossIndicesDna() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:208:46:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDna() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:52:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:136:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_concat_direct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<seqan::ConcatDirect<> > >*; TParam = const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<seqan::ConcatDirect<> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >*; TParam = const StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, Tag<Tristate_> >; TValue = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >; typename Value<TContext>::Type = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >; TValue2 = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:786:21:   required from 'typename seqan::Fibre<seqan::Index<TObject, TSpec>, const seqan::Tag<seqan::FibreText_> >::Type& seqan::getFibre(Index<TObject, TSpec>&, FibreText) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >; TSpec = IndexEsa<>; typename Fibre<Index<TObject, TSpec>, const Tag<FibreText_> >::Type = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >; FibreText = const Tag<FibreText_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:1357:122:   required from 'typename seqan::Fibre<seqan::Index<TObject, TSpec>, const seqan::Tag<seqan::FibreText_> >::Type& seqan::indexText(Index<TObject, TSpec>&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >; TSpec = IndexEsa<>; typename Fibre<Index<TObject, TSpec>, const Tag<FibreText_> >::Type = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:98:5:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Packed<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:216:52:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_concat_direct.h:81:7: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   81 | class StringSet<TString, Owner<ConcatDirect<TSpec> > >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<seqan::ConcatDirect<> > >::StringSet(const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<seqan::ConcatDirect<> > >&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:947:29:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Packed<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:216:52:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:947:29:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = External<ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:217:54:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>; TIterator = seqan::ExtStringFwdConstIterator<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<SimpleType<unsigned char, Dna_>, MMap<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:947:29:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = MMap<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:218:50:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In member function 'seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >& seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; unsigned int m = 7; TPack = seqan::Tag<seqan::Pack_>; TPair = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]',
    inlined from 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1330:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:470:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  470 |                         outRef->i2.i[skipped++] = 0;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 7 into destination object 'seqan::Tuple<unsigned char, 7, seqan::Tag<seqan::Pack_> >::i' of size 7
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexWotd<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:175:45:   required from 'void seqan::crossIndicesDna() [with TIndexSpec1 = IndexEsa<>; TIndexSpec2 = IndexWotd<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:208:46:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDna() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:52:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>, AdaptorIterator<Iter<const String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Packed<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Packed<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:216:52:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>; TIterator = seqan::ExtStringFwdConstIterator<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>, AdaptorIterator<ExtStringFwdConstIterator<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = External<ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:217:54:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna_>, MMap<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, MMap<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexEsa<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:105:64:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, MMap<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = MMap<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:218:50:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::MMap<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexEsa<> >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:100:104:   required from 'void seqan::crossSameIndex(TText1&, TText2&) [with TIndexSpec = IndexEsa<>; TText1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TText2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:191:32:   required from 'void seqan::crossStringsDna() [with TIndexSpec = IndexEsa<>; TStringSpec1 = Alloc<>; TStringSpec2 = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:215:51:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaStrings() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 17%] Linking CXX executable ../../bin/test_index_creation
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_creation.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o -o ../../bin/test_index_creation  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Built target test_index_creation
make  -f tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Building CXX object tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o -MF CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o.d -o CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna_dfi.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna_dfi.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna_dfi.cpp:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexWotd<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexWotd<Dfi<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexWotd<>; TIndexSpec2 = IndexWotd<Dfi<> >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:175:45:   required from 'void seqan::crossIndicesDna() [with TIndexSpec1 = IndexWotd<>; TIndexSpec2 = IndexWotd<Dfi<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:229:53:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaDfi() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna_dfi.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:70:9:   required from 'void seqan::crossBottomUp(TIndex1&, TIndex2&) [with TIterSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TIndex1 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexWotd<> >; TIndex2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexWotd<Dfi<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:87:66:   required from 'void seqan::crossIndex(TText&) [with TIndexSpec1 = IndexWotd<>; TIndexSpec2 = IndexWotd<Dfi<> >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:175:45:   required from 'void seqan::crossIndicesDna() [with TIndexSpec1 = IndexWotd<>; TIndexSpec2 = IndexWotd<Dfi<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_crosscompare.h:229:53:   required from 'void seqan::SEQAN_TEST_testIndexCrossCompareDnaDfi() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_crosscompare_dna_dfi.cpp:53:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 17%] Linking CXX executable ../../bin/test_index_crosscompare_dna_dfi
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_crosscompare_dna_dfi.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o -o ../../bin/test_index_crosscompare_dna_dfi  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Built target test_index_crosscompare_dna_dfi
make  -f tests/index/CMakeFiles/test_index_qgram.dir/build.make tests/index/CMakeFiles/test_index_qgram.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_qgram.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_qgram.dir/build.make tests/index/CMakeFiles/test_index_qgram.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Building CXX object tests/index/CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o -MF CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o.d -o CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_qgram.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_qgram.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_qgram.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_qgram.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_qgram.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_qgram.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >; TSource = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >; TValue2 = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = IndexQGram<UngappedShape<2> >; TSpecFinder = const Tag<FinderQGramLookup_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >&; typename Haystack<TFinder>::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_qgram.h:75:33:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, QGramFindLookup) [with TText = String<char, Alloc<> >; TSpec = IndexQGram<UngappedShape<2> >; TSpecFinder = const Tag<FinderQGramLookup_>; TPattern = char [3]; QGramFindLookup = const Tag<FinderQGramLookup_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = IndexQGram<UngappedShape<2> >; TSpecFinder = const Tag<FinderQGramLookup_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_qgram_index.h:327:5:   required from 'void seqan::SEQAN_TEST_testQGramFind() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_qgram.cpp:62:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<2> > >& seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<2> > >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<2> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<2> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::String<char, seqan::Alloc<> >; TShapeSpec = seqan::UngappedShape<2>; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
In constructor 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter() [with TContainer = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>]',
    inlined from 'seqan::Pipe<TInput, seqan::Source<TSpec> >::Pipe(const TInput&) [with TInput = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:74:24,
    inlined from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:105:22:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:9: warning: '*(unsigned char (*)[9])((char*)&<unnamed> + offsetof(seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >,seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >::data_iterator))' is used uninitialized [-Wuninitialized]
  102 |         data_iterator = TIterator();
      |         ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In function 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:25: note: '<anonymous>' declared here
  102 |         data_iterator = TIterator();
      |                         ^~~~~~~~~~~
[ 17%] Linking CXX executable ../../bin/test_index_qgram
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_qgram.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o -o ../../bin/test_index_qgram  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Built target test_index_qgram
make  -f tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build.make tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build.make tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Building CXX object tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o -MF CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o.d -o CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp
[ 17%] Linking CXX executable ../../bin/test_index_crosscompare_dna
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_crosscompare_dna.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o -o ../../bin/test_index_crosscompare_dna  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Built target test_index_crosscompare_dna
make  -f tests/index/CMakeFiles/test_index_shapes.dir/build.make tests/index/CMakeFiles/test_index_shapes.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_shapes.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_shapes.dir/build.make tests/index/CMakeFiles/test_index_shapes.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Building CXX object tests/index/CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o -MF CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o.d -o CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_shapes.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_sa_bwtwalk.h:120:15:   required from 'void seqan::SEQAN_TEST_testBWTWalk() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:58:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_shapes.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_shapes.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_sa_bwtwalk.h:120:15:   required from 'void seqan::SEQAN_TEST_testBWTWalk() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:58:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_sa_bwtwalk.h:120:15:   required from 'void seqan::SEQAN_TEST_testBWTWalk() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:58:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_sa_bwtwalk.h:120:15:   required from 'void seqan::SEQAN_TEST_testBWTWalk() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:58:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_sa_bwtwalk.h:120:15:   required from 'void seqan::SEQAN_TEST_testBWTWalk() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_sa_bwtwalk.cpp:58:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_shapes.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_shapes.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:68:
In copy constructor 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]',
    inlined from 'void seqan::SEQAN_TEST_testShapes() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_shapes.h:130:14:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:285:26: warning: 'shapeB.seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::hValue' may be used uninitialized [-Wmaybe-uninitialized]
  285 |             hValue(other.hValue) {}
      |                    ~~~~~~^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_shapes.cpp:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_shapes.h: In function 'void seqan::SEQAN_TEST_testShapes() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_shapes.h:129:30: note: 'shapeB' declared here
  129 |     Shape<Dna, GenericShape> shapeB(pattern);
      |                              ^~~~~~
[ 17%] Linking CXX executable ../../bin/test_index_shapes
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_shapes.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o -o ../../bin/test_index_shapes  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Built target test_index_shapes
make  -f tests/index/CMakeFiles/test_index_drawing.dir/build.make tests/index/CMakeFiles/test_index_drawing.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_drawing.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_drawing.dir/build.make tests/index/CMakeFiles/test_index_drawing.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Building CXX object tests/index/CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o -MF CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o.d -o CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_drawing.h:67:15:   required from 'void seqan::writeRecords(TFile&, Index<TText, IndexEsa<TESASpec> >&, DotDrawing) [with TFile = std::__cxx11::basic_stringstream<char>; TText = String<char, Alloc<> >; TESASpec = void; DotDrawing = Tag<DotDrawing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:45:17:   required from 'void SEQAN_TEST_test_index_drawing_esa_dot() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:80:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::__cxx11::basic_stringstream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_drawing.h:101:18:   required from 'void seqan::writeRecords(TFile&, Index<TText, IndexEsa<TESASpec> >&, DotDrawing) [with TFile = std::__cxx11::basic_stringstream<char>; TText = String<char, Alloc<> >; TESASpec = void; DotDrawing = Tag<DotDrawing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:45:17:   required from 'void SEQAN_TEST_test_index_drawing_esa_dot() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:80:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_drawing.h:67:15:   required from 'void seqan::writeRecords(TFile&, Index<TText, IndexEsa<TESASpec> >&, DotDrawing) [with TFile = std::__cxx11::basic_stringstream<char>; TText = String<char, Alloc<> >; TESASpec = void; DotDrawing = Tag<DotDrawing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:45:17:   required from 'void SEQAN_TEST_test_index_drawing_esa_dot() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:80:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDown(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = ParentLinks<>; TDfsOrder = Preorder_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = ParentLinks<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2256:24:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:268:11:   required from 'const seqan::Iter<TContainer, TSpec>& seqan::operator++(Iter<TContainer, TSpec>&) [with TContainer = Index<String<char, Alloc<> > >; TSpec = VSTree<TopDown<ParentLinks<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_drawing.h:69:21:   required from 'void seqan::writeRecords(TFile&, Index<TText, IndexEsa<TESASpec> >&, DotDrawing) [with TFile = std::__cxx11::basic_stringstream<char>; TText = String<char, Alloc<> >; TESASpec = void; DotDrawing = Tag<DotDrawing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:45:17:   required from 'void SEQAN_TEST_test_index_drawing_esa_dot() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:80:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1838:27: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1838 |             oldParentDesc = nodeUp(it);
      |             ~~~~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:268:11:   required from 'const seqan::Iter<TContainer, TSpec>& seqan::operator++(Iter<TContainer, TSpec>&) [with TContainer = Index<String<char, Alloc<> > >; TSpec = VSTree<TopDown<ParentLinks<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_drawing.h:69:21:   required from 'void seqan::writeRecords(TFile&, Index<TText, IndexEsa<TESASpec> >&, DotDrawing) [with TFile = std::__cxx11::basic_stringstream<char>; TText = String<char, Alloc<> >; TESASpec = void; DotDrawing = Tag<DotDrawing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:45:17:   required from 'void SEQAN_TEST_test_index_drawing_esa_dot() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:80:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::__cxx11::basic_stringstream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_drawing.h:101:18:   required from 'void seqan::writeRecords(TFile&, Index<TText, IndexEsa<TESASpec> >&, DotDrawing) [with TFile = std::__cxx11::basic_stringstream<char>; TText = String<char, Alloc<> >; TESASpec = void; DotDrawing = Tag<DotDrawing_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:45:17:   required from 'void SEQAN_TEST_test_index_drawing_esa_dot() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_drawing.cpp:80:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 17%] Linking CXX executable ../../bin/test_index_sa_bwtwalk
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_sa_bwtwalk.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o -o ../../bin/test_index_sa_bwtwalk  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Built target test_index_sa_bwtwalk
make  -f tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build.make tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build.make tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Building CXX object tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o -MF CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o.d -o CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm_rank_dictionary.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/reduced_aminoacid.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm_rank_dictionary.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm_rank_dictionary.cpp:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm_rank_dictionary.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 17%] Linking CXX executable ../../bin/test_index_drawing
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_drawing.dir/link.txt --verbose=1
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o -o ../../bin/test_index_drawing  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Built target test_index_drawing
make  -f tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build.make tests/index/CMakeFiles/test_index_fm_sparse_string.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_fm_sparse_string.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build.make tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Building CXX object tests/index/CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o -MF CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o.d -o CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm_sparse_string.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm_rank_dictionary.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm_sparse_string.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm_sparse_string.cpp:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 18%] Linking CXX executable ../../bin/test_index_fm_sparse_string
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_fm_sparse_string.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o -o ../../bin/test_index_fm_sparse_string  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Built target test_index_fm_sparse_string
make  -f tests/index/CMakeFiles/test_index_base.dir/build.make tests/index/CMakeFiles/test_index_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_base.dir/build.make tests/index/CMakeFiles/test_index_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Building CXX object tests/index/CMakeFiles/test_index_base.dir/test_index_base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_base.dir/test_index_base.cpp.o -MF CMakeFiles/test_index_base.dir/test_index_base.cpp.o.d -o CMakeFiles/test_index_base.dir/test_index_base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/random:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >*; TParam = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<SimpleType<unsigned char, Dna5_>, Packed<> >*; TParam = const String<SimpleType<unsigned char, Dna5_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Tag<Tristate_> >; TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >; typename Value<TContext>::Type = String<SimpleType<unsigned char, Dna5_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TValue2 = String<SimpleType<unsigned char, Dna5_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = String<SimpleType<unsigned char, Dna5_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:786:21:   required from 'typename seqan::Fibre<seqan::Index<TObject, TSpec>, const seqan::Tag<seqan::FibreText_> >::Type& seqan::getFibre(Index<TObject, TSpec>&, FibreText) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; typename Fibre<Index<TObject, TSpec>, const Tag<FibreText_> >::Type = String<SimpleType<unsigned char, Dna5_>, Packed<> >; FibreText = const Tag<FibreText_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:288:19:   required from 'void seqan::clear(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:107:10:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >*; TParam = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<SimpleType<unsigned char, Dna_>, Packed<> >*; TParam = const String<SimpleType<unsigned char, Dna_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<String<SimpleType<unsigned char, Dna_>, Packed<> >, Tag<Tristate_> >; TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; typename Value<TContext>::Type = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; TValue2 = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = String<SimpleType<unsigned char, Dna_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:786:21:   required from 'typename seqan::Fibre<seqan::Index<TObject, TSpec>, const seqan::Tag<seqan::FibreText_> >::Type& seqan::getFibre(Index<TObject, TSpec>&, FibreText) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; typename Fibre<Index<TObject, TSpec>, const Tag<FibreText_> >::Type = String<SimpleType<unsigned char, Dna_>, Packed<> >; FibreText = const Tag<FibreText_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:288:19:   required from 'void seqan::clear(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:107:10:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:103:16:   required from 'void IndexTest__OpenSave<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_base.cpp:101:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 18%] Linking CXX executable ../../bin/test_index_fm_rank_dictionary
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_fm_rank_dictionary.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o -o ../../bin/test_index_fm_rank_dictionary  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Built target test_index_fm_rank_dictionary
make  -f tests/index/CMakeFiles/test_index_fm.dir/build.make tests/index/CMakeFiles/test_index_fm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_fm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_fm.dir/build.make tests/index/CMakeFiles/test_index_fm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Building CXX object tests/index/CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o -MF CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o.d -o CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_fm.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = SmallWTFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:469:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = PrefixLVFMIndexConfig<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:714:20:   required from 'void FibreTest<TIndex, TFibreTag>::setUp() [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<> > >; TFibreTag = const seqan::Tag<seqan::FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:709:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:65:
In member function 'seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >& seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; unsigned int m = 7; TPack = seqan::Tag<seqan::Pack_>; TPair = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]',
    inlined from 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1330:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:470:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  470 |                         outRef->i2.i[skipped++] = 0;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 7 into destination object 'seqan::Tuple<unsigned char, 7, seqan::Tag<seqan::Pack_> >::i' of size 7
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
In constructor 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter() [with TContainer = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>]',
    inlined from 'seqan::Pipe<TInput, seqan::Source<TSpec> >::Pipe(const TInput&) [with TInput = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:74:24,
    inlined from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:67:22:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:9: warning: '*(unsigned char (*)[9])((char*)&<unnamed> + offsetof(seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >,seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >::data_iterator))' is used uninitialized [-Wuninitialized]
  102 |         data_iterator = TIterator();
      |         ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In function 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:25: note: '<anonymous>' declared here
  102 |         data_iterator = TIterator();
      |                         ^~~~~~~~~~~
In constructor 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter() [with TContainer = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>]',
    inlined from 'seqan::Pipe<TInput, seqan::Source<TSpec> >::Pipe(const TInput&) [with TInput = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:74:24,
    inlined from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:67:22:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:9: warning: '*(unsigned char (*)[9])((char*)&<unnamed> + offsetof(seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >,seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >::data_iterator))' is used uninitialized [-Wuninitialized]
  102 |         data_iterator = TIterator();
      |         ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In function 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:25: note: '<anonymous>' declared here
  102 |         data_iterator = TIterator();
      |                         ^~~~~~~~~~~
[ 18%] Linking CXX executable ../../bin/test_index_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_base.dir/test_index_base.cpp.o -o ../../bin/test_index_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Built target test_index_base
make  -f tests/index/CMakeFiles/test_index_bifm.dir/build.make tests/index/CMakeFiles/test_index_bifm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_bifm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_bifm.dir/build.make tests/index/CMakeFiles/test_index_bifm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Building CXX object tests/index/CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o -MF CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o.d -o CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:65:
In member function 'seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >& seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; unsigned int m = 7; TPack = seqan::Tag<seqan::Pack_>; TPair = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]',
    inlined from 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1330:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:470:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  470 |                         outRef->i2.i[skipped++] = 0;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 7 into destination object 'seqan::Tuple<unsigned char, 7, seqan::Tag<seqan::Pack_> >::i' of size 7
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<bool>; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<bool>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<bool>; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<bool>; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<bool>; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<bool>; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<bool>; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<bool>; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<bool>; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<bool>; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<bool>; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<bool>; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<bool>; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<bool>; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<bool>, Source<> >, Caster<bool, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<bool>, seqan::Source<> >, seqan::Caster<bool, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<bool>; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<bool>; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<bool>, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<bool>, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<bool, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<bool>; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<bool>; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<bool>, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<bool>; TPattern = seqan::String<bool>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<bool>, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<bool, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<bool, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 18%] Linking CXX executable ../../bin/test_index_fm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_fm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o -o ../../bin/test_index_fm  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Built target test_index_fm
make  -f tests/index/CMakeFiles/test_index_vstree.dir/build.make tests/index/CMakeFiles/test_index_vstree.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_vstree.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_vstree.dir/build.make tests/index/CMakeFiles/test_index_vstree.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Building CXX object tests/index/CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o -MF CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o.d -o CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:198:35:   required from 'void BidirectionalFMIndexTest__SearchInStringSet<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:166:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:103:13:   required from 'bool testBidirectionalIndex(TBiFMIndex&, TText&, TText&, TPattern&) [with TBiFMIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >; TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TPattern = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:161:31:   required from 'void BidirectionalFMIndexTest__SearchInString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_bifm.cpp:142:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >*; TParam = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<SimpleType<unsigned char, Dna5_>, Packed<> >*; TParam = const String<SimpleType<unsigned char, Dna5_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Tag<Tristate_> >; TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >; typename Value<TContext>::Type = String<SimpleType<unsigned char, Dna5_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TValue2 = String<SimpleType<unsigned char, Dna5_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = String<SimpleType<unsigned char, Dna5_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:786:21:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:436:35:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >*; TParam = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<SimpleType<unsigned char, Dna_>, Packed<> >*; TParam = const String<SimpleType<unsigned char, Dna_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<String<SimpleType<unsigned char, Dna_>, Packed<> >, Tag<Tristate_> >; TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; typename Value<TContext>::Type = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; TValue2 = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = String<SimpleType<unsigned char, Dna_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:786:21:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:436:35:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:105:33:   required from 'void TopDownIndexIteratorTest__GoDown<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_vstree.cpp:103:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:65:
In member function 'seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >& seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; unsigned int m = 7; TPack = seqan::Tag<seqan::Pack_>; TPair = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]',
    inlined from 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1330:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:470:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  470 |                         outRef->i2.i[skipped++] = 0;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 7 into destination object 'seqan::Tuple<unsigned char, 7, seqan::Tag<seqan::Pack_> >::i' of size 7
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
In constructor 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter() [with TContainer = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>]',
    inlined from 'seqan::Pipe<TInput, seqan::Source<TSpec> >::Pipe(const TInput&) [with TInput = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:74:24,
    inlined from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:67:22:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:9: warning: '*(unsigned char (*)[9])((char*)&<unnamed> + offsetof(seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >,seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >::data_iterator))' is used uninitialized [-Wuninitialized]
  102 |         data_iterator = TIterator();
      |         ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In function 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:25: note: '<anonymous>' declared here
  102 |         data_iterator = TIterator();
      |                         ^~~~~~~~~~~
In constructor 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter() [with TContainer = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>]',
    inlined from 'seqan::Pipe<TInput, seqan::Source<TSpec> >::Pipe(const TInput&) [with TInput = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:74:24,
    inlined from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:67:22:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:9: warning: '*(unsigned char (*)[9])((char*)&<unnamed> + offsetof(seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >,seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >::data_iterator))' is used uninitialized [-Wuninitialized]
  102 |         data_iterator = TIterator();
      |         ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In function 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:25: note: '<anonymous>' declared here
  102 |         data_iterator = TIterator();
      |                         ^~~~~~~~~~~
[ 18%] Linking CXX executable ../../bin/test_index_vstree
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_vstree.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o -o ../../bin/test_index_vstree  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Built target test_index_vstree
make  -f tests/index/CMakeFiles/test_index_view.dir/build.make tests/index/CMakeFiles/test_index_view.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_view.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_view.dir/build.make tests/index/CMakeFiles/test_index_view.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Building CXX object tests/index/CMakeFiles/test_index_view.dir/test_index_view.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_view.dir/test_index_view.cpp.o -MF CMakeFiles/test_index_view.dir/test_index_view.cpp.o.d -o CMakeFiles/test_index_view.dir/test_index_view.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 18%] Linking CXX executable ../../bin/test_index_bifm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_bifm.dir/link.txt --verbose=1
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o -o ../../bin/test_index_bifm  -lrt -lz -lbz2
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Built target test_index_bifm
make  -f tests/index/CMakeFiles/test_index_finder.dir/build.make tests/index/CMakeFiles/test_index_finder.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_finder.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_finder.dir/build.make tests/index/CMakeFiles/test_index_finder.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Building CXX object tests/index/CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o -MF CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o.d -o CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:233:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_vstree_factory.h: In instantiation of 'typename seqan::View<seqan::Factory<seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > > > >::Type seqan::view(Factory<Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > > >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = Preorder; typename View<Factory<Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > > > >::Type = Factory<Iter<Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >, VSTree<TopDown<ParentLinks<> > > >, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:62:37:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_vstree_factory.h:237:23: warning: implicitly-declared 'constexpr seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >& seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >::operator=(const seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >&)' is deprecated [-Wdeprecated-copy]
  237 |     host(factoryView) = view(_host(factory, typename IsView<TIndex>::Type()));
      |     ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:142:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>; TSpec = void]'
   88 |     Index(Index const & other) :
      |     ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:64:11:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = ContainerView<String<char, Alloc<> >, void>; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_vstree_factory.h:314:58:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > > seqan::getObject(Factory<Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > > >&, TId) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = Preorder; TId = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:63:30:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:64:11:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:73:15:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:74:15:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> >, IndexSa<> >; TSource = Index<String<char, Alloc<> >, IndexSa<> >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> >, IndexSa<> >; TValue2 = Index<String<char, Alloc<> >, IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexSa<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> >, IndexSa<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_vstree_factory.h:192:17:   required from 'typename seqan::Host<seqan::Factory<seqan::Iter<TIndex, seqan::VSTree<TSpec> > > >::Type& seqan::_host(Factory<Iter<TIndex, VSTree<TSpec> > >&, const False&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >; typename Host<Factory<Iter<TIndex, VSTree<TSpec> > > >::Type = Index<String<char, Alloc<> >, IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_vstree_factory.h:237:35:   required from 'typename seqan::View<seqan::Factory<seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > > > >::Type seqan::view(Factory<Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > > >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = Preorder; typename View<Factory<Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > > > >::Type = Factory<Iter<Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >, VSTree<TopDown<ParentLinks<> > > >, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:62:37:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >& seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::String<char, seqan::Alloc<> >; TSpec = void]'
   88 |     Index(Index const & other) :
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = ContainerView<String<char, Alloc<> >, void>; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_vstree_factory.h:314:58:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > > seqan::getObject(Factory<Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > > >&, TId) [with TIndex = Index<ContainerView<String<char, Alloc<> >, void>, IndexSa<> >; TSpec = Preorder; TId = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:63:30:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:68:9:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:68:9:   required from 'void compareTreeIterators(TIndex&, TIndexView&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TIndexView = seqan::Index<seqan::ContainerView<seqan::String<char, seqan::Alloc<> >, void>, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.h:147:25:   required from 'void SEQAN_TEST_test_index_view_basic() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_view.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/refwrap.h:39,
                 from /usr/include/c++/13/vector:68,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 19%] Linking CXX executable ../../bin/test_index_view
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_view.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_view.dir/test_index_view.cpp.o -o ../../bin/test_index_view  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_index_view
make  -f tests/index/CMakeFiles/test_find_backtracking.dir/build.make tests/index/CMakeFiles/test_find_backtracking.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_find_backtracking.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_find_backtracking.dir/build.make tests/index/CMakeFiles/test_find_backtracking.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/index/CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o -MF CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o.d -o CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:220:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'void seqan::clear(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:87:18:   required from 'seqan::Finder<seqan::Index<TObject, TSpec>, TSpecFinder>::Finder(TIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::FMIndex<>; TSpecFinder = const seqan::Tag<seqan::FinderSTree_>; TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:62:9:   required from 'IndexFinderTest<TIndex_>::IndexFinderTest() [with TIndex_ = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from 'IndexFinderTest__FindFirstChar<SEQAN_TParam>::IndexFinderTest__FindFirstChar() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   recursively required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:35: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:21: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'void seqan::clear(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:87:18:   required from 'seqan::Finder<seqan::Index<TObject, TSpec>, TSpecFinder>::Finder(TIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >; TSpec = seqan::FMIndex<>; TSpecFinder = const seqan::Tag<seqan::FinderSTree_>; TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:62:9:   required from 'IndexFinderTest<TIndex_>::IndexFinderTest() [with TIndex_ = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from 'IndexFinderTest__FindFirstChar<SEQAN_TParam>::IndexFinderTest__FindFirstChar() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   recursively required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:35: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:21: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'void seqan::clear(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:87:18:   required from 'seqan::Finder<seqan::Index<TObject, TSpec>, TSpecFinder>::Finder(TIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >; TSpec = seqan::FMIndex<>; TSpecFinder = const seqan::Tag<seqan::FinderSTree_>; TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:62:9:   required from 'IndexFinderTest<TIndex_>::IndexFinderTest() [with TIndex_ = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from 'IndexFinderTest__FindFirstChar<SEQAN_TParam>::IndexFinderTest__FindFirstChar() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   recursively required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:35: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:21: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'void seqan::clear(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:87:18:   required from 'seqan::Finder<seqan::Index<TObject, TSpec>, TSpecFinder>::Finder(TIndex&) [with TText = seqan::String<char, seqan::Alloc<> >; TSpec = seqan::FMIndex<>; TSpecFinder = const seqan::Tag<seqan::FinderSTree_>; TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:62:9:   required from 'IndexFinderTest<TIndex_>::IndexFinderTest() [with TIndex_ = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from 'IndexFinderTest__FindFirstChar<SEQAN_TParam>::IndexFinderTest__FindFirstChar() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   recursively required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:35: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:21: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'void seqan::clear(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:87:18:   required from 'seqan::Finder<seqan::Index<TObject, TSpec>, TSpecFinder>::Finder(TIndex&) [with TText = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = seqan::FMIndex<>; TSpecFinder = const seqan::Tag<seqan::FinderSTree_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:62:9:   required from 'IndexFinderTest<TIndex_>::IndexFinderTest() [with TIndex_ = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from 'IndexFinderTest__FindFirstChar<SEQAN_TParam>::IndexFinderTest__FindFirstChar() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   recursively required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:35: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:21: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'void seqan::clear(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:87:18:   required from 'seqan::Finder<seqan::Index<TObject, TSpec>, TSpecFinder>::Finder(TIndex&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::FMIndex<>; TSpecFinder = const seqan::Tag<seqan::FinderSTree_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:62:9:   required from 'IndexFinderTest<TIndex_>::IndexFinderTest() [with TIndex_ = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from 'IndexFinderTest__FindFirstChar<SEQAN_TParam>::IndexFinderTest__FindFirstChar() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   recursively required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/test_system.h:250:60:   required from 'static bool seqan::TypedTestFactory_<TTestCase, seqan::TagList<TTag2, TSubList2> >::make(const char*, const char*) [with TTestCase = IndexFinderTest__FindFirstChar; TType = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSubList = seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >, seqan::TagList<seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:35: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:21: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:171:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  409 |     ModifiedString<TPattern const, ModReverse> revPattern(pattern);
      |                                                ^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  409 |     ModifiedString<TPattern const, ModReverse> revPattern(pattern);
      |                                                ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  409 |     ModifiedString<TPattern const, ModReverse> revPattern(pattern);
      |                                                ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  409 |     ModifiedString<TPattern const, ModReverse> revPattern(pattern);
      |                                                ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  409 |     ModifiedString<TPattern const, ModReverse> revPattern(pattern);
      |                                                ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  409 |     ModifiedString<TPattern const, ModReverse> revPattern(pattern);
      |                                                ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:75:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<std::vector<char, std::allocator<char> >, IndexSa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = std::vector<char, std::allocator<char> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<std::vector<char, std::allocator<char> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:98:40:   required from 'void IndexFinderTest__StdVector<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:93:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:142:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<std::__cxx11::basic_string<char>, IndexSa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = std::__cxx11::basic_string<char>; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<std::__cxx11::basic_string<char>, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:90:40:   required from 'void IndexFinderTest__StdString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:85:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<std::vector<char, std::allocator<char> >, IndexSa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<std::vector<char, std::allocator<char> >, IndexSa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = std::vector<char, std::allocator<char> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<std::vector<char, std::allocator<char> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:98:40:   required from 'void IndexFinderTest__StdVector<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:93:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<std::__cxx11::basic_string<char>, IndexSa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<std::__cxx11::basic_string<char>, IndexSa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = std::__cxx11::basic_string<char>; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<std::__cxx11::basic_string<char>, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:90:40:   required from 'void IndexFinderTest__StdString<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:85:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:409:48:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::ConcatVirtual<> >; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<StringSet<String<char, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::ConcatVirtual<> >; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<char, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<char, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<char, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<char, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<char, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<SimpleType<unsigned char, Dna5_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<SimpleType<unsigned char, Dna5_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<char, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<char, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<char, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:356:33:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<StringSet<String<char, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::ConcatVirtual<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<char, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<char, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<char, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<char, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:357:32:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<StringSet<String<char, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::ConcatVirtual<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:356:33:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::ConcatVirtual<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, AdaptorIterator<Iter<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, ConcatVirtual<> >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:357:32:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::ConcatVirtual<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, PrefixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<String<char, Alloc<> >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<char*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:356:33:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<char, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<char, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<char, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<char, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<char, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<String<char, Alloc<> >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<char, Alloc<> >, PrefixSegment>, AdaptorIterator<char*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:357:32:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<char, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<char, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<char, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<char, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<char, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<char, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Packed<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Packed<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Packed<> >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:356:33:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<SimpleType<unsigned char, Dna5_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<SimpleType<unsigned char, Dna5_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Packed<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Packed<> >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Packed<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Packed<> >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:357:32:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<SimpleType<unsigned char, Dna5_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<SimpleType<unsigned char, Dna5_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna5_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:356:33:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Packed<> >, Packed<> >, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:357:32:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Packed<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Packed<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:356:33:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:357:32:   required from 'bool seqan::_goDownString(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>; TSpec = EmptyEdges; TString = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, FMIndex<> >; TSpec = EmptyEdges; TObject = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:411:15:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:74:5:   required from 'void IndexFinderTest__FindFirstChar<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:72:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> >, IndexEsa<> >; TSource = Index<String<char, Alloc<> >, IndexEsa<> >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> >, IndexEsa<> >; TValue2 = Index<String<char, Alloc<> >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexEsa<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> >, IndexEsa<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<char, Alloc<> >, IndexEsa<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<char, Alloc<> >, IndexEsa<> >, const Tag<FinderMlr_> >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<char, Alloc<> >, IndexEsa<> >&; typename Haystack<TFinder>::Type = Index<String<char, Alloc<> >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:59:46:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [7]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >& seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::String<char, seqan::Alloc<> >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> >, IndexSa<> >; TSource = Index<String<char, Alloc<> >, IndexSa<> >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> >, IndexSa<> >; TValue2 = Index<String<char, Alloc<> >, IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexSa<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> >, IndexSa<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = IndexSa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<char, Alloc<> >, IndexSa<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<char, Alloc<> >, IndexSa<> >, const Tag<FinderMlr_> >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<char, Alloc<> >, IndexSa<> >&; typename Haystack<TFinder>::Type = Index<String<char, Alloc<> >, IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:59:46:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = String<char, Alloc<> >; TSpec = IndexSa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [7]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = IndexSa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >& seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:88:5: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >' has user-provided 'seqan::Index<TText, seqan::IndexSa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexSa<TSpec> >&) [with TText = seqan::String<char, seqan::Alloc<> >; TSpec = void]'
   88 |     Index(Index const & other) :
      |     ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_base.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1348:19:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:142:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexSa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1348:19:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexSa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexSa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> >, IndexSa<> >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:18:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TStage = StageInitial_; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1353:10:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:377:17:   required from 'bool seqan::_goDown(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = Preorder; TDfsOrder = Preorder_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<> > >, IndexSa<> >; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:527:52:   required from 'bool seqan::_moveIteratorsDown(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:432:27:   required from 'bool seqan::_pushState(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, const TStage&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TStage = StageInitial_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1311:31:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, TDelegate&, const TStage&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TStage = StageInitial_; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1353:10:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:630:20: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, char>& seqan::VertexSA<long unsigned int, char>::operator=(const seqan::VertexSA<long unsigned int, char>&)' is deprecated [-Wdeprecated-copy]
  630 |     it._parentDesc = value(it);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, char>' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = char]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >*; TParam = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<SimpleType<unsigned char, Dna5_>, Packed<> >*; TParam = const String<SimpleType<unsigned char, Dna5_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Tag<Tristate_> >; TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >; typename Value<TContext>::Type = String<SimpleType<unsigned char, Dna5_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TValue2 = String<SimpleType<unsigned char, Dna5_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna5_>, Packed<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = String<SimpleType<unsigned char, Dna5_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:786:21:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >*; TParam = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<SimpleType<unsigned char, Dna_>, Packed<> >*; TParam = const String<SimpleType<unsigned char, Dna_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<String<SimpleType<unsigned char, Dna_>, Packed<> >, Tag<Tristate_> >; TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; typename Value<TContext>::Type = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; TValue2 = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = String<SimpleType<unsigned char, Dna_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:786:21:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna5_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Packed<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna_>, Packed<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = StringSet<String<char, Alloc<> > >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [7]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:82:9:   required from 'void IndexFinderTest__DefaultFinder<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_finder.cpp:78:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_backtracking.h:1349:22:   required from 'void seqan::_find(Finder_<Index<TObject, TSpec>, Index<TPattern, TPatternIndexSpec>, Backtracking<TDistance, TSpec> >&, Index<TObject, TSpec>&, Index<TPattern, TPatternIndexSpec>&, TValue, TDelegate&) [with TText = String<char, Alloc<> >; TTextIndexSpec = IndexSa<>; TPattern = StringSet<String<char, Alloc<> > >; TPatternIndexSpec = IndexSa<>; TDistance = Tag<HammingDistance_>; TSpec = Tag<BacktrackingSemiGlobal_>; TValue = int; TDelegate = FinderTester<Index<String<char, Alloc<> >, IndexSa<> >, Index<StringSet<String<char, Alloc<> > >, IndexSa<> >, Backtracking<Tag<HammingDistance_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.h:210:10:   required from 'void SEQAN_TEST_test_find_backtracking_multiple_hamming_banana_vs_ada_ana() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find_backtracking.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:65:
In member function 'seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >& seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; unsigned int m = 7; TPack = seqan::Tag<seqan::Pack_>; TPair = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]',
    inlined from 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1330:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:470:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  470 |                         outRef->i2.i[skipped++] = 0;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 7 into destination object 'seqan::Tuple<unsigned char, 7, seqan::Tag<seqan::Pack_> >::i' of size 7
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
[ 19%] Linking CXX executable ../../bin/test_find_backtracking
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_find_backtracking.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o -o ../../bin/test_find_backtracking  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_find_backtracking
make  -f tests/index/CMakeFiles/test_find2_index_approx.dir/build.make tests/index/CMakeFiles/test_find2_index_approx.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_find2_index_approx.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_find2_index_approx.dir/build.make tests/index/CMakeFiles/test_find2_index_approx.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/index/CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o -MF CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o.d -o CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:301:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  301 | struct IdentityMap : public std::unary_function< TValue, TValue > {
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_helpers.h:306:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  306 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int > {
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:476:9:   required from 'SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const seqan::DnaString&, uint8_t)> [with auto:5 = seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >, seqan::VSTree<seqan::TopDown<> > >; seqan::DnaString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:509:17:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDir = Tag<BidirectionalRev_>; TDistanceTag = Tag<LevenshteinDistance_>; uint32_t = unsigned int; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:556:25:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const OptimalSearch<nbrBlocks>&, const TDistanceTag&) [with TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDistanceTag = Tag<LevenshteinDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:571:29:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const std::array<OptimalSearch<nbrBlocks>, N>&, const TDistanceTag&) [with TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; long unsigned int N = 3; TDistanceTag = Tag<LevenshteinDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:592:25:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 1; long unsigned int maxErrors = 2; TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<LevenshteinDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:617:35:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const StringSet<TNeedle, TStringSetSpec>&, const TDistanceTag&, const TParallelTag&) [with long unsigned int minErrors = 1; long unsigned int maxErrors = 2; TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TStringSetSpec = Owner<>; TDistanceTag = Tag<LevenshteinDistance_>; TParallelTag = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:481:15:   required from 'void SEQAN_TEST_test_find2_index_approx_small_test() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:497:15:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(T&) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:476:9:   required from 'SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const seqan::DnaString&, uint8_t)> [with auto:5 = seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >, seqan::VSTree<seqan::TopDown<> > >; seqan::DnaString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:509:17:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDir = Tag<BidirectionalRev_>; TDistanceTag = Tag<LevenshteinDistance_>; uint32_t = unsigned int; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:556:25:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const OptimalSearch<nbrBlocks>&, const TDistanceTag&) [with TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDistanceTag = Tag<LevenshteinDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:571:29:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const std::array<OptimalSearch<nbrBlocks>, N>&, const TDistanceTag&) [with TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; long unsigned int N = 3; TDistanceTag = Tag<LevenshteinDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:592:25:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 1; long unsigned int maxErrors = 2; TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<LevenshteinDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:617:35:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const StringSet<TNeedle, TStringSetSpec>&, const TDistanceTag&, const TParallelTag&) [with long unsigned int minErrors = 1; long unsigned int maxErrors = 2; TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TStringSetSpec = Owner<>; TDistanceTag = Tag<LevenshteinDistance_>; TParallelTag = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:481:15:   required from 'void SEQAN_TEST_test_find2_index_approx_small_test() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12:   required from 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:476:9:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:556:25:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const OptimalSearch<nbrBlocks>&, const TDistanceTag&) [with TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDistanceTag = Tag<LevenshteinDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:571:29:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const std::array<OptimalSearch<nbrBlocks>, N>&, const TDistanceTag&) [with TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; long unsigned int N = 3; TDistanceTag = Tag<LevenshteinDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:592:25:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 1; long unsigned int maxErrors = 2; TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<LevenshteinDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:617:35:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const StringSet<TNeedle, TStringSetSpec>&, const TDistanceTag&, const TParallelTag&) [with long unsigned int minErrors = 1; long unsigned int maxErrors = 2; TDelegate = SEQAN_TEST_test_find2_index_approx_small_test<true>()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TStringSetSpec = Owner<>; TDistanceTag = Tag<LevenshteinDistance_>; TParallelTag = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:481:15:   required from 'void SEQAN_TEST_test_find2_index_approx_small_test() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int, 2, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:395:15:   required from 'void testOptimalSearchScheme(std::array<seqan::OptimalSearch<nbrBlocks>, N>, const TDistanceTag&) [with long unsigned int nbrBlocks = 1; long unsigned int N = 1; TDistanceTag = seqan::Tag<seqan::HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.h:420:28:   required from 'void SEQAN_TEST_test_find2_index_approx_hamming() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_find2_index_approx.cpp:42:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:68:
In member function 'constexpr const std::array<_Tp, _Nm>::value_type& std::array<_Tp, _Nm>::operator[](size_type) const [with _Tp = unsigned char; long unsigned int _Nm = 1]',
    inlined from 'void seqan::_optimalSearchSchemeDeletion(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::LevenshteinDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::LevenshteinDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalFwd_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:322:57:
/usr/include/c++/13/array:213:24: warning: array subscript 18446744073709551615 is above array bounds of 'std::__array_traits<unsigned char, 1>::_Type' {aka 'const unsigned char [1]'} [-Warray-bounds=]
  213 |         return _M_elems[__n];
      |                ~~~~~~~~^
/usr/include/c++/13/array: In function 'void seqan::_optimalSearchSchemeDeletion(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::LevenshteinDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::LevenshteinDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalFwd_>]':
/usr/include/c++/13/array:109:55: note: while referencing 'std::array<unsigned char, 1>::_M_elems'
  109 |       typename __array_traits<_Tp, _Nm>::_Type        _M_elems;
      |                                                       ^~~~~~~~
In member function 'constexpr const std::array<_Tp, _Nm>::value_type& std::array<_Tp, _Nm>::operator[](size_type) const [with _Tp = unsigned char; long unsigned int _Nm = 1]',
    inlined from 'void seqan::_optimalSearchSchemeDeletion(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::LevenshteinDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::LevenshteinDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalRev_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:322:57:
/usr/include/c++/13/array:213:24: warning: array subscript 18446744073709551615 is above array bounds of 'std::__array_traits<unsigned char, 1>::_Type' {aka 'const unsigned char [1]'} [-Warray-bounds=]
  213 |         return _M_elems[__n];
      |                ~~~~~~~~^
/usr/include/c++/13/array: In function 'void seqan::_optimalSearchSchemeDeletion(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::LevenshteinDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::LevenshteinDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalRev_>]':
/usr/include/c++/13/array:109:55: note: while referencing 'std::array<unsigned char, 1>::_M_elems'
  109 |       typename __array_traits<_Tp, _Nm>::_Type        _M_elems;
      |                                                       ^~~~~~~~
In member function 'constexpr const std::array<_Tp, _Nm>::value_type& std::array<_Tp, _Nm>::operator[](size_type) const [with _Tp = unsigned char; long unsigned int _Nm = 1]',
    inlined from 'void seqan::_optimalSearchSchemeChildren(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::HammingDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::HammingDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalRev_>; TDistanceTag = Tag<HammingDistance_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:395:63,
    inlined from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::HammingDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::HammingDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalRev_>; TDistanceTag = Tag<HammingDistance_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:540:37:
/usr/include/c++/13/array:213:24: warning: array subscript 18446744073709551615 is above array bounds of 'std::__array_traits<unsigned char, 1>::_Type' {aka 'const unsigned char [1]'} [-Warray-bounds=]
  213 |         return _M_elems[__n];
      |                ~~~~~~~~^
/usr/include/c++/13/array: In function 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::HammingDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::HammingDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalRev_>; TDistanceTag = Tag<HammingDistance_>]':
/usr/include/c++/13/array:109:55: note: while referencing 'std::array<unsigned char, 1>::_M_elems'
  109 |       typename __array_traits<_Tp, _Nm>::_Type        _M_elems;
      |                                                       ^~~~~~~~
In member function 'constexpr const std::array<_Tp, _Nm>::value_type& std::array<_Tp, _Nm>::operator[](size_type) const [with _Tp = unsigned char; long unsigned int _Nm = 1]',
    inlined from 'void seqan::_optimalSearchSchemeChildren(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::HammingDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::HammingDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalFwd_>; TDistanceTag = Tag<HammingDistance_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:395:63,
    inlined from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::HammingDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::HammingDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalFwd_>; TDistanceTag = Tag<HammingDistance_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:540:37:
/usr/include/c++/13/array:213:24: warning: array subscript 18446744073709551615 is above array bounds of 'std::__array_traits<unsigned char, 1>::_Type' {aka 'const unsigned char [1]'} [-Warray-bounds=]
  213 |         return _M_elems[__n];
      |                ~~~~~~~~^
/usr/include/c++/13/array: In function 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = testOptimalSearch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> >, seqan::Preorder, 1, seqan::Tag<seqan::HammingDistance_> >(seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int, 2, 1> > > >, seqan::VSTree<seqan::TopDown<> > >, const seqan::OptimalSearch<1>&, const seqan::OptimalSearch<1>&, unsigned int, const std::vector<unsigned char>&, time_t, const seqan::Tag<seqan::HammingDistance_>&)::<lambda(const TIt&, const String<SimpleType<unsigned char, Dna_>, Alloc<> >&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<void, FastFMIndexConfig<void, unsigned int, 2, 1> >; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 1; TDir = Tag<BidirectionalFwd_>; TDistanceTag = Tag<HammingDistance_>]':
/usr/include/c++/13/array:109:55: note: while referencing 'std::array<unsigned char, 1>::_M_elems'
  109 |       typename __array_traits<_Tp, _Nm>::_Type        _M_elems;
      |                                                       ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:65:
In member function 'seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >& seqan::Pipe<TInput, seqan::Multi<seqan::Sampler<m, TPack>, TPair, TLimitsString> >::operator++() [with TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; unsigned int m = 7; TPack = seqan::Tag<seqan::Pack_>; TPair = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]',
    inlined from 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1330:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:470:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  470 |                         outRef->i2.i[skipped++] = 0;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'bool seqan::append(Pool<TValue, TPoolSpec>&, TSource&) [with TValue = Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7NCompMulti<Pair<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<unsigned char, 7, Tag<Pack_> >, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >; TSource = Pipe<Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >, Multi<Sampler<7, Tag<Pack_> >, Pair<long unsigned int, long unsigned int, Tag<Pack_> >, String<long unsigned int, Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 7 into destination object 'seqan::Tuple<unsigned char, 7, seqan::Tag<seqan::Pack_> >::i' of size 7
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
In constructor 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter() [with TContainer = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>]',
    inlined from 'seqan::Pipe<TInput, seqan::Source<TSpec> >::Pipe(const TInput&) [with TInput = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:74:24,
    inlined from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:67:22:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:9: warning: '*(unsigned char (*)[9])((char*)&<unnamed> + offsetof(seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >,seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >::data_iterator))' is used uninitialized [-Wuninitialized]
  102 |         data_iterator = TIterator();
      |         ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In function 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Packed<> >; TAlgSpec = Skew7]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:25: note: '<anonymous>' declared here
  102 |         data_iterator = TIterator();
      |                         ^~~~~~~~~~~
In constructor 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter() [with TContainer = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >; TIterator = seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >, seqan::Packed<> >; TSpec = seqan::Tag<seqan::Default_>]',
    inlined from 'seqan::Pipe<TInput, seqan::Source<TSpec> >::Pipe(const TInput&) [with TInput = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<> >; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:74:24,
    inlined from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:67:22:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:9: warning: '*(unsigned char (*)[9])((char*)&<unnamed> + offsetof(seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >,seqan::Iter<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Packed<seqan::Alloc<void> > >::data_iterator))' is used uninitialized [-Wuninitialized]
  102 |         data_iterator = TIterator();
      |         ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In function 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna5_>, Packed<> >; TAlgSpec = Skew7]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:102:25: note: '<anonymous>' declared here
  102 |         data_iterator = TIterator();
      |                         ^~~~~~~~~~~
[ 19%] Linking CXX executable ../../bin/test_find2_index_approx
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_find2_index_approx.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o -o ../../bin/test_find2_index_approx  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_find2_index_approx
make  -f tests/index/CMakeFiles/test_index_repeats.dir/build.make tests/index/CMakeFiles/test_index_repeats.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_repeats.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_repeats.dir/build.make tests/index/CMakeFiles/test_index_repeats.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/index/CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o -MF CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o.d -o CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_repeats.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_repeats.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_repeats.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_repeats.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 19%] Linking CXX executable ../../bin/test_index_finder
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_finder.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o -o ../../bin/test_index_finder  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_index_finder
make  -f tests/index/CMakeFiles/test_index_swift.dir/build.make tests/index/CMakeFiles/test_index_swift.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_swift.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_swift.dir/build.make tests/index/CMakeFiles/test_index_swift.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/index/CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/index/CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o -MF CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o.d -o CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_swift.cpp
[ 19%] Linking CXX executable ../../bin/test_index_repeats
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_repeats.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o -o ../../bin/test_index_repeats  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_index_repeats
make  -f tests/journaled_set/CMakeFiles/test_journaled_set.dir/build.make tests/journaled_set/CMakeFiles/test_journaled_set.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_set /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_set/CMakeFiles/test_journaled_set.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/journaled_set/CMakeFiles/test_journaled_set.dir/build.make tests/journaled_set/CMakeFiles/test_journaled_set.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/journaled_set/CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_set && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/journaled_set/CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o -MF CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o.d -o CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set/test_journaled_set.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_swift.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_swift.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set/test_journaled_set.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set/test_journaled_set.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:740:41:   required from 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5_>, UngappedShape<10> >, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_swift.cpp:28:16:   required from 'void SEQAN_TEST_test_index_swift_find_empty_pattern() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/index/test_index_swift.cpp:34:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::UngappedShape<10> >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::UngappedShape<10> >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::UngappedShape<10> >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::UngappedShape<10> >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::UngappedShape<10> >]'
  143 |         Index(Index const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set/test_journaled_set.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set/test_journaled_set.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence_journaled/sequence_journaled.h:385:20:   required from 'TStream& seqan::operator<<(TStream&, const String<TValue, Journaled<THostSpec, TJournalSpec, TBufferSpec> >&) [with TStream = std::basic_ostream<char>; TValue = char; THostSpec = Alloc<>; TJournalSpec = SortedArray; TBufferSpec = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::String<char, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray> >; T2 = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::String<char, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray> >; T2 = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set/test_journaled_set.h:288:5:   required from 'void SEQAN_TEST_test_journaled_set_assign_value() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set/test_journaled_set.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence_journaled/sequence_journaled.h:385:20:   required from 'TStream& seqan::operator<<(TStream&, const String<TValue, Journaled<THostSpec, TJournalSpec, TBufferSpec> >&) [with TStream = std::basic_ostream<char>; TValue = char; THostSpec = Alloc<>; TJournalSpec = SortedArray; TBufferSpec = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::String<char, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray> >; T2 = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::String<char, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray> >; T2 = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set/test_journaled_set.h:288:5:   required from 'void SEQAN_TEST_test_journaled_set_assign_value() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set/test_journaled_set.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 19%] Linking CXX executable ../../bin/test_index_swift
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_swift.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o -o ../../bin/test_index_swift  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_index_swift
make  -f tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build.make tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build.make tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o -MF CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o.d -o CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_basic_observable.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_basic_observable.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_basic_observable.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_basic_observable.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 19%] Linking CXX executable ../../bin/test_journaled_set
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_set && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_journaled_set.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o -o ../../bin/test_journaled_set  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_journaled_set
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o -MF CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o.d -o CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 19%] Linking CXX executable ../../bin/test_basic_observable
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_observable.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o -o ../../bin/test_basic_observable  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_basic_observable
make  -f tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build.make tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build.make tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o -MF CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o.d -o CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_map.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_map.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_map.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_map.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'seqan::DeltaMapEntry<TRefPos, TStorePos>::DeltaMapEntry(TDeltaPos, TDeltaRecord, const TCoverage&, seqan::DeltaEndType) [with TRefPos = long unsigned int; TStorePos = long unsigned int; TDeltaPos = long unsigned int; TDeltaRecord = seqan::Pair<long unsigned int, long unsigned int, seqan::BitPacked<2, 62> >; TCoverage = seqan::String<bool, seqan::Packed<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.h:150:5:   required from 'void SEQAN_TEST_test_journaled_string_tree_insert() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:114:9: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  114 |         deltaCoverage(_coverage),
      |         ^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::InsertValueToString_<TExpand>::insertValue_(T&, TPosition, TValue&) [with T = seqan::String<seqan::DeltaMapEntry<long unsigned int, long unsigned int>, seqan::Alloc<> >; TPosition = long int; TValue = const seqan::DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1410:54:   required from 'void seqan::insertValue(String<TValue, TSpec>&, TPosition, const TValue&, Tag<TUsage>) [with TTargetValue = DeltaMapEntry<long unsigned int, long unsigned int>; TTargetSpec = Alloc<>; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1010:16:   required from 'void seqan::insertValue(T&&, TPosition, TValue&&) [with T = String<DeltaMapEntry<long unsigned int, long unsigned int>, Alloc<> >&; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:506:16:   required from 'void seqan::impl::insert(const seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TTag&) [with TDeltaMap = seqan::DeltaMap<seqan::DefaultJstConfig<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = char; TCoverage = seqan::String<bool, seqan::Packed<> >; TTag = seqan::Tag<seqan::DeltaTypeSnp_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = char; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeSnp_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = char; TIds = String<unsigned int, Alloc<> >; TDeltaType = Tag<DeltaTypeSnp_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.h:142:11:   required from 'void SEQAN_TEST_test_journaled_string_tree_insert() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1396:33: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(const seqan::DeltaMapEntry<long unsigned int, long unsigned int>&)' first required here
 1396 |         typename Value<T>::Type temp_copy = _value; //temp copy because resizeSpace could invalidate _value
      |                                 ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = seqan::DeltaMapEntry<long unsigned int, long unsigned int>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource1 = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource2 = DeltaMapEntry<long unsigned int, long unsigned int>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagExact_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   required from 'typename seqan::Size<seqan::String<TValue, TSpec> >::Type seqan::reserve(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagExact_; typename Size<String<TValue, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_alloc.h:123:16:   required from 'seqan::String<TValue, seqan::Alloc<TSpec> >::String(const seqan::String<TValue, seqan::Alloc<TSpec> >&) [with TValue = seqan::DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:110:7:   required from 'void SEQAN_TEST_test_journaled_string_tree_host() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(seqan::DeltaMapEntry<long unsigned int, long unsigned int>&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'seqan::DeltaMapEntry<TRefPos, TStorePos>::DeltaMapEntry(TDeltaPos, TDeltaRecord, const TCoverage&, seqan::DeltaEndType) [with TRefPos = unsigned int; TStorePos = long unsigned int; TDeltaPos = unsigned int; TDeltaRecord = seqan::Pair<long unsigned int, long unsigned int, seqan::BitPacked<2, 62> >; TCoverage = seqan::String<bool, seqan::Packed<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_map.h:114:5:   required from 'void SEQAN_TEST_test_delta_map_insert() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_map.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:114:9: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  114 |         deltaCoverage(_coverage),
      |         ^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::InsertValueToString_<TExpand>::insertValue_(T&, TPosition, TValue&) [with T = seqan::String<seqan::DeltaMapEntry<unsigned int, long unsigned int>, seqan::Alloc<> >; TPosition = long int; TValue = const seqan::DeltaMapEntry<unsigned int, long unsigned int>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1410:54:   required from 'void seqan::insertValue(String<TValue, TSpec>&, TPosition, const TValue&, Tag<TUsage>) [with TTargetValue = DeltaMapEntry<unsigned int, long unsigned int>; TTargetSpec = Alloc<>; TPosition = long int; TValue = DeltaMapEntry<unsigned int, long unsigned int>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1010:16:   required from 'void seqan::insertValue(T&&, TPosition, TValue&&) [with T = String<DeltaMapEntry<unsigned int, long unsigned int>, Alloc<> >&; TPosition = long int; TValue = DeltaMapEntry<unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:506:16:   required from 'void seqan::impl::insert(const seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TTag&) [with TDeltaMap = seqan::DeltaMap<TestDeltaMapConfig, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = seqan::SimpleType<unsigned char, seqan::Dna_>; TCoverage = seqan::String<bool, seqan::Packed<> >; TTag = seqan::Tag<seqan::DeltaTypeSnp_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = TestDeltaMapConfig; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = SimpleType<unsigned char, Dna_>; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeSnp_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_map.h:108:11:   required from 'void SEQAN_TEST_test_delta_map_insert() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_map.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1396:33: note: synthesized method 'seqan::DeltaMapEntry<unsigned int, long unsigned int>::DeltaMapEntry(const seqan::DeltaMapEntry<unsigned int, long unsigned int>&)' first required here
 1396 |         typename Value<T>::Type temp_copy = _value; //temp copy because resizeSpace could invalidate _value
      |                                 ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::DeltaMapEntry<unsigned int, long unsigned int>*; TParam = seqan::DeltaMapEntry<unsigned int, long unsigned int>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = DeltaMapEntry<unsigned int, long unsigned int>*; TParam = DeltaMapEntry<unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = DeltaMapEntry<unsigned int, long unsigned int>*; TSource1 = DeltaMapEntry<unsigned int, long unsigned int>*; TSource2 = DeltaMapEntry<unsigned int, long unsigned int>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = DeltaMapEntry<unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = DeltaMapEntry<unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagExact_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   required from 'typename seqan::Size<seqan::String<TValue, TSpec> >::Type seqan::reserve(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagExact_; typename Size<String<TValue, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_alloc.h:123:16:   required from 'seqan::String<TValue, seqan::Alloc<TSpec> >::String(const seqan::String<TValue, seqan::Alloc<TSpec> >&) [with TValue = seqan::DeltaMapEntry<unsigned int, long unsigned int>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:110:7:   required from 'void SEQAN_TEST_test_delta_map_iterator() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_delta_map.cpp:68:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::DeltaMapEntry<unsigned int, long unsigned int>::DeltaMapEntry(seqan::DeltaMapEntry<unsigned int, long unsigned int>&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 19%] Linking CXX executable ../../bin/test_journaled_string_tree
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_journaled_string_tree.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o -o ../../bin/test_journaled_string_tree  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_journaled_string_tree
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o -MF CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o.d -o CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp
[ 19%] Linking CXX executable ../../bin/test_delta_map
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_delta_map.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o -o ../../bin/test_delta_map  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 19%] Built target test_delta_map
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o -MF CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o.d -o CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h: In instantiation of 'void SEQAN_TEST_test_journaled_string_tree_traverser_constructor() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:50:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   50 | class TraverserImpl<TJst, JstTraversalSpec<TSpec> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:101:20: note: synthesized method 'seqan::TraverserImpl<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::JstTraversalSpec<void> >::TraverserImpl(const seqan::TraverserImpl<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::JstTraversalSpec<void> >&)' first required here
  101 |         TTraverser travCopy(traverser);
      |                    ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::impl::positionReference(const seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type = seqan::String<seqan::Pair<long unsigned int, long unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:390:39:   required from 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::position(const TraverserImpl<TJst, JstTraversalSpec<TSpec> >&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; typename Position<TraverserImpl<TJst, JstTraversalSpec<TSpec> > >::Type = String<Pair<long unsigned int, long unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:357:36:   required from 'void SEQAN_TEST_test_journaled_string_tree_traverser_basic_traversal() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:968:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  968 |     auto tmp = impl::baseNode(me).coverage;
      |          ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::impl::positionBranch(const seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type = seqan::String<seqan::Pair<long unsigned int, long unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:392:36:   required from 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::position(const TraverserImpl<TJst, JstTraversalSpec<TSpec> >&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; typename Position<TraverserImpl<TJst, JstTraversalSpec<TSpec> > >::Type = String<Pair<long unsigned int, long unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:357:36:   required from 'void SEQAN_TEST_test_journaled_string_tree_traverser_basic_traversal() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:999:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  999 |     auto tmp = impl::activeNode(me).coverage;
      |          ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:77:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h: In instantiation of 'TSize seqan::impl::expandNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = int; TObserver = std::tuple<>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:869:36:   required from 'TSize seqan::impl::moveWindow(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = int; TObserver = std::tuple<>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:451:32:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = int; TObserver = std::tuple<>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:506:12:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:288:16:   required from 'void SEQAN_TEST_test_journaled_string_tree_traverser_at_end() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:50:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h:51:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   51 | class JstTraversalNode
      |       ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:830:18: note: synthesized method 'seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >::JstTraversalNode(const seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >&)' first required here
  830 |             auto child = *parentPtr;
      |                  ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'seqan::DeltaMapEntry<TRefPos, TStorePos>::DeltaMapEntry(TDeltaPos, TDeltaRecord, const TCoverage&, seqan::DeltaEndType) [with TRefPos = long unsigned int; TStorePos = long unsigned int; TDeltaPos = long unsigned int; TDeltaRecord = seqan::Pair<long unsigned int, long unsigned int, seqan::BitPacked<2, 62> >; TCoverage = seqan::String<bool, seqan::Packed<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:530:17:   required from 'void seqan::impl::insert(seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >, TDeltaPos, const TDeltaValue&, const TCoverage&, const seqan::DeltaTypeDel&) [with TDeltaMap = seqan::DeltaMap<seqan::DefaultJstConfig<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = int; TCoverage = seqan::String<bool, seqan::Packed<> >; seqan::DeltaTypeDel = seqan::Tag<seqan::DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = int; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = int; TIds = String<unsigned int, Alloc<> >; TDeltaType = Tag<DeltaTypeDel_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_mock.h:121:15:   required from 'static TJst JstMockGenerator::_createSimpleJst() [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:65:60:   required from 'void SEQAN_TEST_test_journaled_string_tree_traverser_constructor() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:114:9: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  114 |         deltaCoverage(_coverage),
      |         ^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h: In instantiation of 'void seqan::impl::create(seqan::JstBuffer_<TJournaledStringTree, TSpec>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = seqan::Tag<seqan::ForwardTraversal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:503:17:   required from 'bool seqan::create(JstBuffer_<TJournaledStringTree, TSpec>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<ForwardTraversal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:556:11:   required from 'void seqan::init(JstBuffer_<TJournaledStringTree, TSpec>&, TJst&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<ForwardTraversal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:902:9:   required from 'void seqan::impl::init(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TObserver&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TObserver = std::tuple<>; TProxySelector = seqan::SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:407:15:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<>; TProxySelector = SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:353:9:   required from 'void SEQAN_TEST_test_journaled_string_tree_traverser_basic_traversal() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:328:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  328 |             f.setIt = jSetSplitter[jobId];
      |             ~~~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'decltype (seqan::bitScanForward(node.coverage)) seqan::impl::selectProxy(const TTraverserNode&, const seqan::SelectValidProxy&) [with TTraverserNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; decltype (seqan::bitScanForward(node.coverage)) = long unsigned int; seqan::SelectValidProxy = seqan::Tag<seqan::SelectValidProxy_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:580:38:   required from 'bool seqan::impl::createBranch(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode&, TTraversalNode&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TProxySelection = seqan::SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:831:35:   required from 'TSize seqan::impl::expandNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = int; TObserver = std::tuple<>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:869:36:   required from 'TSize seqan::impl::moveWindow(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = int; TObserver = std::tuple<>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:451:32:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = int; TObserver = std::tuple<>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:506:12:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:288:16:   required from 'void SEQAN_TEST_test_journaled_string_tree_traverser_at_end() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:50:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:528:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  528 |     auto tmp1 = node.coverage;
      |          ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::InsertValueToString_<TExpand>::insertValue_(T&, TPosition, TValue&) [with T = seqan::String<seqan::DeltaMapEntry<long unsigned int, long unsigned int>, seqan::Alloc<> >; TPosition = long int; TValue = const seqan::DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1410:54:   required from 'void seqan::insertValue(String<TValue, TSpec>&, TPosition, const TValue&, Tag<TUsage>) [with TTargetValue = DeltaMapEntry<long unsigned int, long unsigned int>; TTargetSpec = Alloc<>; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1010:16:   required from 'void seqan::insertValue(T&&, TPosition, TValue&&) [with T = String<DeltaMapEntry<long unsigned int, long unsigned int>, Alloc<> >&; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:529:16:   required from 'void seqan::impl::insert(seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >, TDeltaPos, const TDeltaValue&, const TCoverage&, const seqan::DeltaTypeDel&) [with TDeltaMap = seqan::DeltaMap<seqan::DefaultJstConfig<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = int; TCoverage = seqan::String<bool, seqan::Packed<> >; seqan::DeltaTypeDel = seqan::Tag<seqan::DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = int; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = int; TIds = String<unsigned int, Alloc<> >; TDeltaType = Tag<DeltaTypeDel_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_mock.h:121:15:   required from 'static TJst JstMockGenerator::_createSimpleJst() [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:65:60:   required from 'void SEQAN_TEST_test_journaled_string_tree_traverser_constructor() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1396:33: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(const seqan::DeltaMapEntry<long unsigned int, long unsigned int>&)' first required here
 1396 |         typename Value<T>::Type temp_copy = _value; //temp copy because resizeSpace could invalidate _value
      |                                 ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >*; TParam = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >*; TParam = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_block.h:402:19:   required from 'void seqan::appendValue(String<TValue, Block<SPACE> >&, TValue&&, Tag<TUsage>) [with TTargetValue = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; long unsigned int SPACE = 4096; TValue = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Block<> >&; TSource = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:175:16:   required from 'void seqan::impl::pushNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode&&, TObserver&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TObserver = std::tuple<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:926:19:   required from 'void seqan::impl::init(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TObserver&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TObserver = std::tuple<>; TProxySelector = seqan::SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:407:15:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<>; TProxySelector = SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:353:9:   required from 'void SEQAN_TEST_test_journaled_string_tree_traverser_basic_traversal() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h:51:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   51 | class JstTraversalNode
      |       ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >::JstTraversalNode(seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = seqan::DeltaMapEntry<long unsigned int, long unsigned int>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource1 = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource2 = DeltaMapEntry<long unsigned int, long unsigned int>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagExact_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   required from 'typename seqan::Size<seqan::String<TValue, TSpec> >::Type seqan::reserve(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagExact_; typename Size<String<TValue, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_alloc.h:123:16:   required from 'seqan::String<TValue, seqan::Alloc<TSpec> >::String(const seqan::String<TValue, seqan::Alloc<TSpec> >&) [with TValue = seqan::DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:110:7:   required from 'static TJst JstMockGenerator::_createSimpleJst() [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.h:65:60:   required from 'void SEQAN_TEST_test_journaled_string_tree_traverser_constructor() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(seqan::DeltaMapEntry<long unsigned int, long unsigned int>&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'seqan::DeltaMapEntry<TRefPos, TStorePos>::DeltaMapEntry(TDeltaPos, TDeltaRecord, const TCoverage&, seqan::DeltaEndType) [with TRefPos = long unsigned int; TStorePos = long unsigned int; TDeltaPos = long unsigned int; TDeltaRecord = seqan::Pair<long unsigned int, long unsigned int, seqan::BitPacked<2, 62> >; TCoverage = seqan::String<bool, seqan::Packed<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:507:17:   required from 'void seqan::impl::insert(const seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TTag&) [with TDeltaMap = seqan::DeltaMap<seqan::DefaultJstConfig<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = char; TCoverage = seqan::String<bool, seqan::Packed<> >; TTag = seqan::Tag<seqan::DeltaTypeSnp_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = char; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeSnp_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = char; TIds = std::vector<unsigned int>; TDeltaType = Tag<DeltaTypeSnp_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_mock.h:164:15:   required from 'static TJst JstMockGenerator::_createComplexJst() [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:82:57:   required from 'void _testFindJst(seqan::Pattern<TNeedle, TSpec>&, TSize, TSize) [with TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::Horspool_>; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:119:21:   required from 'void SEQAN_TEST_test_journaled_string_tree_find_horspool() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:114:9: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  114 |         deltaCoverage(_coverage),
      |         ^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:77:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h: In instantiation of 'TSize seqan::impl::expandNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:869:36:   required from 'TSize seqan::impl::moveWindow(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:451:32:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = long unsigned int; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:290:16:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:95:9:   required from 'void _testFindJst(seqan::Pattern<TNeedle, TSpec>&, TSize, TSize) [with TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::Horspool_>; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:119:21:   required from 'void SEQAN_TEST_test_journaled_string_tree_find_horspool() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h:51:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   51 | class JstTraversalNode
      |       ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:830:18: note: synthesized method 'seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >::JstTraversalNode(const seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >&)' first required here
  830 |             auto child = *parentPtr;
      |                  ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::impl::positionReference(const seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type = seqan::String<seqan::Pair<long unsigned int, long unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:390:39:   required from 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::position(const TraverserImpl<TJst, JstTraversalSpec<TSpec> >&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; typename Position<TraverserImpl<TJst, JstTraversalSpec<TSpec> > >::Type = String<Pair<long unsigned int, long unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:67:28:   required from 'void TestHelperHitCollector_<TTraverser>::operator()() [with TTraverser = seqan::TraverserImpl<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::JstTraversalSpec<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:263:17:   required from 'decltype (seqan::impl::run(extension._derived, traverser, TCxtPosition()).first) seqan::run(JstExtensionBase<TExtension, TCxtPosition>&, const TTraverser&, TDelegate&&) [with TExtension = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TCxtPosition = Tag<ContextRange_>; TTraverser = TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; decltype (impl::run(extension._derived, traverser, TCxtPosition()).first) = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:289:25:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:95:9:   required from 'void _testFindJst(seqan::Pattern<TNeedle, TSpec>&, TSize, TSize) [with TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::Horspool_>; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:119:21:   required from 'void SEQAN_TEST_test_journaled_string_tree_find_horspool() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:968:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  968 |     auto tmp = impl::baseNode(me).coverage;
      |          ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::impl::positionBranch(const seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type = seqan::String<seqan::Pair<long unsigned int, long unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:392:36:   required from 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::position(const TraverserImpl<TJst, JstTraversalSpec<TSpec> >&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; typename Position<TraverserImpl<TJst, JstTraversalSpec<TSpec> > >::Type = String<Pair<long unsigned int, long unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:67:28:   required from 'void TestHelperHitCollector_<TTraverser>::operator()() [with TTraverser = seqan::TraverserImpl<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::JstTraversalSpec<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:263:17:   required from 'decltype (seqan::impl::run(extension._derived, traverser, TCxtPosition()).first) seqan::run(JstExtensionBase<TExtension, TCxtPosition>&, const TTraverser&, TDelegate&&) [with TExtension = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TCxtPosition = Tag<ContextRange_>; TTraverser = TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; decltype (impl::run(extension._derived, traverser, TCxtPosition()).first) = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:289:25:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:95:9:   required from 'void _testFindJst(seqan::Pattern<TNeedle, TSpec>&, TSize, TSize) [with TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::Horspool_>; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:119:21:   required from 'void SEQAN_TEST_test_journaled_string_tree_find_horspool() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:999:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  999 |     auto tmp = impl::activeNode(me).coverage;
      |          ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::InsertValueToString_<TExpand>::insertValue_(T&, TPosition, TValue&) [with T = seqan::String<seqan::DeltaMapEntry<long unsigned int, long unsigned int>, seqan::Alloc<> >; TPosition = long int; TValue = const seqan::DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1410:54:   required from 'void seqan::insertValue(String<TValue, TSpec>&, TPosition, const TValue&, Tag<TUsage>) [with TTargetValue = DeltaMapEntry<long unsigned int, long unsigned int>; TTargetSpec = Alloc<>; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1010:16:   required from 'void seqan::insertValue(T&&, TPosition, TValue&&) [with T = String<DeltaMapEntry<long unsigned int, long unsigned int>, Alloc<> >&; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:506:16:   required from 'void seqan::impl::insert(const seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TTag&) [with TDeltaMap = seqan::DeltaMap<seqan::DefaultJstConfig<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = char; TCoverage = seqan::String<bool, seqan::Packed<> >; TTag = seqan::Tag<seqan::DeltaTypeSnp_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = char; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeSnp_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = char; TIds = std::vector<unsigned int>; TDeltaType = Tag<DeltaTypeSnp_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_mock.h:164:15:   required from 'static TJst JstMockGenerator::_createComplexJst() [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:82:57:   required from 'void _testFindJst(seqan::Pattern<TNeedle, TSpec>&, TSize, TSize) [with TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::Horspool_>; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:119:21:   required from 'void SEQAN_TEST_test_journaled_string_tree_find_horspool() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1396:33: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(const seqan::DeltaMapEntry<long unsigned int, long unsigned int>&)' first required here
 1396 |         typename Value<T>::Type temp_copy = _value; //temp copy because resizeSpace could invalidate _value
      |                                 ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h: In instantiation of 'void seqan::impl::create(seqan::JstBuffer_<TJournaledStringTree, TSpec>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = seqan::Tag<seqan::ForwardTraversal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:503:17:   required from 'bool seqan::create(JstBuffer_<TJournaledStringTree, TSpec>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<ForwardTraversal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:556:11:   required from 'void seqan::init(JstBuffer_<TJournaledStringTree, TSpec>&, TJst&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<ForwardTraversal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:902:9:   required from 'void seqan::impl::init(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TObserver&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:407:15:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:282:9:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:95:9:   required from 'void _testFindJst(seqan::Pattern<TNeedle, TSpec>&, TSize, TSize) [with TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::Horspool_>; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:119:21:   required from 'void SEQAN_TEST_test_journaled_string_tree_find_horspool() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:328:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  328 |             f.setIt = jSetSplitter[jobId];
      |             ~~~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'decltype (seqan::bitScanForward(node.coverage)) seqan::impl::selectProxy(const TTraverserNode&, const seqan::SelectValidProxy&) [with TTraverserNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; decltype (seqan::bitScanForward(node.coverage)) = long unsigned int; seqan::SelectValidProxy = seqan::Tag<seqan::SelectValidProxy_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:580:38:   required from 'bool seqan::impl::createBranch(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode&, TTraversalNode&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TProxySelection = seqan::SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:831:35:   required from 'TSize seqan::impl::expandNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:869:36:   required from 'TSize seqan::impl::moveWindow(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:451:32:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = long unsigned int; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:290:16:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:95:9:   required from 'void _testFindJst(seqan::Pattern<TNeedle, TSpec>&, TSize, TSize) [with TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::Horspool_>; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:119:21:   required from 'void SEQAN_TEST_test_journaled_string_tree_find_horspool() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:528:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  528 |     auto tmp1 = node.coverage;
      |          ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = seqan::DeltaMapEntry<long unsigned int, long unsigned int>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource1 = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource2 = DeltaMapEntry<long unsigned int, long unsigned int>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagExact_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   required from 'typename seqan::Size<seqan::String<TValue, TSpec> >::Type seqan::reserve(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagExact_; typename Size<String<TValue, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_alloc.h:123:16:   required from 'seqan::String<TValue, seqan::Alloc<TSpec> >::String(const seqan::String<TValue, seqan::Alloc<TSpec> >&) [with TValue = seqan::DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:110:7:   required from 'static TJst JstMockGenerator::_createComplexJst() [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:82:57:   required from 'void _testFindJst(seqan::Pattern<TNeedle, TSpec>&, TSize, TSize) [with TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::Horspool_>; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:119:21:   required from 'void SEQAN_TEST_test_journaled_string_tree_find_horspool() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(seqan::DeltaMapEntry<long unsigned int, long unsigned int>&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >*; TParam = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >*; TParam = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_block.h:402:19:   required from 'void seqan::appendValue(String<TValue, Block<SPACE> >&, TValue&&, Tag<TUsage>) [with TTargetValue = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; long unsigned int SPACE = 4096; TValue = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Block<> >&; TSource = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:175:16:   required from 'void seqan::impl::pushNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode&&, TObserver&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:926:19:   required from 'void seqan::impl::init(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TObserver&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:407:15:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:282:9:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = TestHelperHitCollector_<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:95:9:   required from 'void _testFindJst(seqan::Pattern<TNeedle, TSpec>&, TSize, TSize) [with TNeedle = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::Horspool_>; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.h:119:21:   required from 'void SEQAN_TEST_test_journaled_string_tree_find_horspool() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree/test_journaled_string_tree_find.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h:51:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   51 | class JstTraversalNode
      |       ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >::JstTraversalNode(seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 19%] Linking CXX executable ../../bin/test_journaled_string_tree_traverser
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_journaled_string_tree_traverser.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o -o ../../bin/test_journaled_string_tree_traverser  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_journaled_string_tree_traverser
make  -f tests/map/CMakeFiles/test_map.dir/build.make tests/map/CMakeFiles/test_map.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/map /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/map /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/map/CMakeFiles/test_map.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/map/CMakeFiles/test_map.dir/build.make tests/map/CMakeFiles/test_map.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/map/CMakeFiles/test_map.dir/test_map.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/map && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/map/CMakeFiles/test_map.dir/test_map.cpp.o -MF CMakeFiles/test_map.dir/test_map.cpp.o.d -o CMakeFiles/test_map.dir/test_map.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/map/test_map.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/map/test_map_map.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/map/test_map.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/map/test_map.cpp:33:
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/map/test_map_map.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 19%] Linking CXX executable ../../bin/test_journaled_string_tree_find
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_journaled_string_tree_find.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o -o ../../bin/test_journaled_string_tree_find  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_journaled_string_tree_find
make  -f tests/misc/CMakeFiles/test_misc.dir/build.make tests/misc/CMakeFiles/test_misc.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/misc /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/misc/CMakeFiles/test_misc.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/misc/CMakeFiles/test_misc.dir/build.make tests/misc/CMakeFiles/test_misc.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Building CXX object tests/misc/CMakeFiles/test_misc.dir/test_misc.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/misc && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/misc/CMakeFiles/test_misc.dir/test_misc.cpp.o -MF CMakeFiles/test_misc.dir/test_misc.cpp.o.d -o CMakeFiles/test_misc.dir/test_misc.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc.cpp:33:
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc.cpp:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 20%] Linking CXX executable ../../bin/test_map
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/map && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_map.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_map.dir/test_map.cpp.o -o ../../bin/test_map  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Built target test_map
make  -f tests/modifier/CMakeFiles/test_modifier.dir/build.make tests/modifier/CMakeFiles/test_modifier.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier/CMakeFiles/test_modifier.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/modifier/CMakeFiles/test_modifier.dir/build.make tests/modifier/CMakeFiles/test_modifier.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Building CXX object tests/modifier/CMakeFiles/test_modifier.dir/test_modifier.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/modifier/CMakeFiles/test_modifier.dir/test_modifier.cpp.o -MF CMakeFiles/test_modifier.dir/test_modifier.cpp.o.d -o CMakeFiles/test_modifier.dir/test_modifier.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TCargo>&, const Graph<TSpec>&, const TPropertyMap&, TVertexDescriptor&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, double>, StorePointsOnly>, Alloc<> >; TVertexDescriptor = unsigned int; TValue = int; TCargo = double]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1532:18:   required from 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, double>, StorePointsOnly>, Alloc<> >; TValue = int; TCargo = double]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1513:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2, TValue2) [with TValue = int; TCargo = double; TValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc_interval_tree.h:660:18:   required from 'void seqan::SEQAN_TEST_Interval_Tree__IntervalTreeTest_QueryAtBoundary() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc.cpp:108:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1562:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1562 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, double>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1575:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1575 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, double>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1598:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1598 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, double>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, double>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, int>, StorePointsOnly>, Alloc<> >; TValue = int; TCargo = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1502:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2) [with TValue = int; TCargo = int; TValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc_interval_tree.h:460:22:   required from 'void seqan::IntervalTreeTest_IntervalTree() [with TValue = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc_interval_tree.h:669:39:   required from 'void seqan::SEQAN_TEST_Interval_Tree__IntervalTreeTest_IntervalTree__int() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc.cpp:109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1441:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1441 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1453:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1453 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1475:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1475 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::addInterval(TGraph&, TPropertyMap&, TInterval) [with TGraph = Graph<Directed<void, const Tag<WithoutEdgeId_> > >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, int>, StorePointsOnly>, Alloc<> >; TInterval = IntervalAndCargo<int, int>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1363:16:   required from 'void seqan::addInterval(IntervalTree<TValue, TCargo>&, TInterval) [with TValue = int; TCargo = int; TInterval = IntervalAndCargo<int, int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc_interval_tree.h:613:20:   required from 'void seqan::IntervalTreeTest_AddInterval() [with TValue = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc_interval_tree.h:687:38:   required from 'void seqan::SEQAN_TEST_Interval_Tree__IntervalTreeTest_AddInterval__int() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc.cpp:112:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1286:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1286 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1299:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1299 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1329:31: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1329 |                     next_prop = property(pm, targetVertex(it));
      |                     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, int>, StorePointsOnly>, Alloc<> >; TValue = int; TCargo = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1732:33:   required from 'void seqan::findIntervalsExcludeTouching(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue) [with TValue = int; TCargo = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc_interval_tree.h:628:37:   required from 'void seqan::IntervalTreeTest_AddInterval() [with TValue = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc_interval_tree.h:687:38:   required from 'void seqan::SEQAN_TEST_Interval_Tree__IntervalTreeTest_AddInterval__int() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc.cpp:112:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TCargo>&, const Graph<TSpec>&, const TPropertyMap&, TVertexDescriptor&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, int>, StorePointsOnly>, Alloc<> >; TVertexDescriptor = unsigned int; TValue = int; TCargo = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1532:18:   required from 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, int>, StorePointsOnly>, Alloc<> >; TValue = int; TCargo = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1513:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2, TValue2) [with TValue = int; TCargo = int; TValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc_interval_tree.h:285:22:   required from 'void seqan::IntervalTreeTest_FindIntervalsIntervals() [with TValue = int; TConstructSpec = const Tag<TagComputeCenter_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc_interval_tree.h:723:64:   required from 'void seqan::SEQAN_TEST_Interval_Tree__IntervalTreeTest_FindIntervalsIntervals__int_ComputeCenter() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc/test_misc.cpp:117:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1562:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1562 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1575:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1575 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1598:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1598 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:33:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:255:28: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct LowerFunctor : std::unary_function<char, char>
      |                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:263:29: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  263 | struct CaesarFunctor : std::unary_function<char, char>
      |                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_view.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/helpers.h:42:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   42 | struct CaesarChiffre : public std::unary_function<TArgChar, TResultChar>
      |                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h: In instantiation of 'void SEQAN_TEST_test_modifier_modified_string_construct() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:105:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:119:30: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  119 |         TInnerModifiedString modified(frag);
      |                              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h: In instantiation of 'void SEQAN_TEST_test_modifier_modified_string_cascade() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:108:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:215:30: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  215 |         TInnerModifiedString inner(origInfix);
      |                              ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h: In instantiation of 'void SEQAN_TEST_test_modifier_modified_string_mod_view_segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:114:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:318:30: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  318 |         TInnerModifiedString modified(origInfix);
      |                              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = LowerFunctor; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:326:30: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  326 |         TInnerModifiedString modified(origInfix);
      |                              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = LowerFunctor; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string_padding.h: In instantiation of 'void SEQAN_TEST_test_modified_string_padding_defect_2190() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:133:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string_padding.h:203:54: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  203 |         ModifiedString<decltype(seqInf), ModPadding> modString(seqInf);
      |                                                      ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModPadding_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h: In instantiation of 'seqan::ModifiedIterator<THost, seqan::ModView<TFunctor> >::ModifiedIterator(const THost&, const TFunctor&) [with THost = char*; TFunctor = CaesarChiffre<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_view.h:108:27:   required from 'void SEQAN_TEST_test_modifier_view_iterator() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:94:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:124:27: warning: implicitly-declared 'constexpr CaesarChiffre<char>& CaesarChiffre<char>::operator=(const CaesarChiffre<char>&)' is deprecated [-Wdeprecated-copy]
  124 |         cargo(*this).func = functor;
      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/helpers.h:48:5: note: because 'CaesarChiffre<char>' has user-provided 'CaesarChiffre<TArgChar, TResultChar>::CaesarChiffre(const CaesarChiffre<TArgChar, TResultChar>&) [with TArgChar = char; TResultChar = char]'
   48 |     CaesarChiffre(CaesarChiffre const &other) : _delta(other._delta) {}
      |     ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h: In instantiation of 'seqan::ModifiedIterator<THost, seqan::ModView<TFunctor> >::ModifiedIterator(const THost&, const TFunctor&) [with THost = seqan::Iter<seqan::String<char, seqan::Alloc<> >, seqan::AdaptorIterator<char*, seqan::Tag<seqan::Default_> > >; TFunctor = CaesarChiffre<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_view.h:110:33:   required from 'void SEQAN_TEST_test_modifier_view_iterator() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:94:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:124:27: warning: implicitly-declared 'constexpr CaesarChiffre<char>& CaesarChiffre<char>::operator=(const CaesarChiffre<char>&)' is deprecated [-Wdeprecated-copy]
  124 |         cargo(*this).func = functor;
      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/helpers.h:48:5: note: because 'CaesarChiffre<char>' has user-provided 'CaesarChiffre<TArgChar, TResultChar>::CaesarChiffre(const CaesarChiffre<TArgChar, TResultChar>&) [with TArgChar = char; TResultChar = char]'
   48 |     CaesarChiffre(CaesarChiffre const &other) : _delta(other._delta) {}
      |     ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h: In instantiation of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(const TFunctor&) [with THost = seqan::String<char, seqan::Alloc<> >; TFunctor = CaesarChiffre<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_view.h:155:56:   required from 'void SEQAN_TEST_test_modifier_view_string_caesar_chiffre() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:96:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:159:27: warning: implicitly-declared 'constexpr CaesarChiffre<char>& CaesarChiffre<char>::operator=(const CaesarChiffre<char>&)' is deprecated [-Wdeprecated-copy]
  159 |         cargo(*this).func = functor;
      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/helpers.h:48:5: note: because 'CaesarChiffre<char>' has user-provided 'CaesarChiffre<TArgChar, TResultChar>::CaesarChiffre(const CaesarChiffre<TArgChar, TResultChar>&) [with TArgChar = char; TResultChar = char]'
   48 |     CaesarChiffre(CaesarChiffre const &other) : _delta(other._delta) {}
      |     ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h: In instantiation of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type, const TFunctor&) [with THost = seqan::String<char, seqan::Alloc<> >; TFunctor = CaesarChiffre<char>; typename seqan::Parameter_<TContainer>::Type = seqan::String<char, seqan::Alloc<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_view.h:163:56:   required from 'void SEQAN_TEST_test_modifier_view_string_caesar_chiffre() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:96:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:176:27: warning: implicitly-declared 'constexpr CaesarChiffre<char>& CaesarChiffre<char>::operator=(const CaesarChiffre<char>&)' is deprecated [-Wdeprecated-copy]
  176 |         cargo(*this).func = functor;
      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/helpers.h:48:5: note: because 'CaesarChiffre<char>' has user-provided 'CaesarChiffre<TArgChar, TResultChar>::CaesarChiffre(const CaesarChiffre<TArgChar, TResultChar>&) [with TArgChar = char; TResultChar = char]'
   48 |     CaesarChiffre(CaesarChiffre const &other) : _delta(other._delta) {}
      |     ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h: In instantiation of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(THost_&&, const TFunctor&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::String<char, seqan::Alloc<> >&; THost = seqan::ModifiedString<seqan::String<char, seqan::Alloc<> >, seqan::ModView<CaesarChiffre<char> > >; TFunctor = CaesarChiffre<char>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::String<char, seqan::Alloc<> >, seqan::ModView<CaesarChiffre<char> > >; typename seqan::RemoveReference<THost_>::Type = seqan::String<char, seqan::Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_view.h:298:25:   required from 'void SEQAN_TEST_test_modifier_view_string_nested_modifier() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:100:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:214:27: warning: implicitly-declared 'constexpr CaesarChiffre<char>& CaesarChiffre<char>::operator=(const CaesarChiffre<char>&)' is deprecated [-Wdeprecated-copy]
  214 |         cargo(*this).func = functor;
      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/helpers.h:48:5: note: because 'CaesarChiffre<char>' has user-provided 'CaesarChiffre<TArgChar, TResultChar>::CaesarChiffre(const CaesarChiffre<TArgChar, TResultChar>&) [with TArgChar = char; TResultChar = char]'
   48 |     CaesarChiffre(CaesarChiffre const &other) : _delta(other._delta) {}
      |     ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h: In instantiation of 'void seqan::assignModViewFunctor(ModifiedString<THost, ModView<TFunctor> >&, const TFunctor&) [with THost = ModifiedString<String<char, Alloc<> >, ModView<CaesarChiffre<char> > >; TFunctor = CaesarChiffre<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_view.h:299:29:   required from 'void SEQAN_TEST_test_modifier_view_string_nested_modifier() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:100:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:396:20: warning: implicitly-declared 'constexpr CaesarChiffre<char>& CaesarChiffre<char>::operator=(const CaesarChiffre<char>&)' is deprecated [-Wdeprecated-copy]
  396 |     cargo(me).func = functor;
      |     ~~~~~~~~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/helpers.h:48:5: note: because 'CaesarChiffre<char>' has user-provided 'CaesarChiffre<TArgChar, TResultChar>::CaesarChiffre(const CaesarChiffre<TArgChar, TResultChar>&) [with TArgChar = char; TResultChar = char]'
   48 |     CaesarChiffre(CaesarChiffre const &other) : _delta(other._delta) {}
      |     ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h: In instantiation of 'void seqan::assignModViewFunctor(ModifiedString<THost, ModView<TFunctor> >&, const TFunctor&) [with THost = String<char, Alloc<> >; TFunctor = CaesarChiffre<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_view.h:300:29:   required from 'void SEQAN_TEST_test_modifier_view_string_nested_modifier() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:100:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:396:20: warning: implicitly-declared 'constexpr CaesarChiffre<char>& CaesarChiffre<char>::operator=(const CaesarChiffre<char>&)' is deprecated [-Wdeprecated-copy]
  396 |     cargo(me).func = functor;
      |     ~~~~~~~~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/helpers.h:48:5: note: because 'CaesarChiffre<char>' has user-provided 'CaesarChiffre<TArgChar, TResultChar>::CaesarChiffre(const CaesarChiffre<TArgChar, TResultChar>&) [with TArgChar = char; TResultChar = char]'
   48 |     CaesarChiffre(CaesarChiffre const &other) : _delta(other._delta) {}
      |     ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment> >; TSpec = void; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment> >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:120:30:   required from 'void SEQAN_TEST_test_modifier_modified_string_construct() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:105:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment> >; TSpec = void; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment> >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:216:30:   required from 'void SEQAN_TEST_test_modifier_modified_string_cascade() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:108:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h: In instantiation of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >; TFunctor = CaesarFunctor; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:335:30:   required from 'void SEQAN_TEST_test_modifier_modified_string_mod_view_segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:114:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:198:13: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  198 |             _host(std::forward<THost_>(host)), tmp_value()
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = LowerFunctor; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:446:30:   required from 'void SEQAN_TEST_test_modifier_modified_string_reverse_segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:120:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = LowerFunctor; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h: In instantiation of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TFunctor = LowerFunctor; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:461:30:   required from 'void SEQAN_TEST_test_modifier_modified_string_reverse_segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:120:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:198:13: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  198 |             _host(std::forward<THost_>(host)), tmp_value()
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:106:25:   required from 'void SEQAN_TEST_test_modifier_modified_string_construct() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:105:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:119:30:   required from 'void SEQAN_TEST_test_modifier_modified_string_construct() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:105:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = LowerFunctor; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:318:30:   required from 'void SEQAN_TEST_test_modifier_modified_string_mod_view_segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:114:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModPadding_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string_padding.h:203:54:   required from 'void SEQAN_TEST_test_modified_string_padding_defect_2190() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:133:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<long unsigned int, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<long unsigned int, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:216:27:   required from 'void seqan::setCargo(ModifiedString<THost, ModPos<TPositions> >&, typename Parameter_<TPositions>::Type) [with THost = String<char, Alloc<> >; TPositions = Segment<String<long unsigned int, Alloc<> >, InfixSegment>; typename Parameter_<TPositions>::Type = Segment<String<long unsigned int, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:357:13:   required from 'typename seqan::Infix<seqan::ModifiedString<THost, seqan::ModPos<TPositions> > >::Type seqan::infix(ModifiedString<THost, ModPos<TPositions> >&, TPosBegin, TPosEnd) [with THost = String<char, Alloc<> >; TPositions = String<long unsigned int, Alloc<> >; TPosBegin = int; TPosEnd = int; typename Infix<ModifiedString<THost, ModPos<TPositions> > >::Type = ModifiedString<String<char, Alloc<> >, ModPos<Segment<String<long unsigned int, Alloc<> >, InfixSegment> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:371:9:   required from 'void SEQAN_TEST_test_modifier_modified_string_mod_pos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:116:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<long unsigned int, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:98:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::begin(const ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = ModView<LowerFunctor>; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<Segment<String<char, Alloc<> >, InfixSegment>, ModView<LowerFunctor> >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<Segment<String<char, Alloc<> >, InfixSegment>, ModView<LowerFunctor> >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = ModView<LowerFunctor>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >; T2 = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >; T2 = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:320:9:   required from 'void SEQAN_TEST_test_modifier_modified_string_mod_view_segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:114:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_smart_pointer.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_allocator.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<long unsigned int, Alloc<> >, InfixSegment>; typename Parameter_<const T>::Type = Segment<String<long unsigned int, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:205:36:   required from 'typename seqan::Parameter_<TPositions>::Type seqan::cargo(const ModifiedString<THost, ModPos<TPositions> >&) [with THost = String<char, Alloc<> >; TPositions = Segment<String<long unsigned int, Alloc<> >, InfixSegment>; typename Parameter_<TPositions>::Type = Segment<String<long unsigned int, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:299:24:   required from 'typename seqan::Size<seqan::ModifiedString<THost, seqan::ModPos<TPositions> > >::Type seqan::length(const ModifiedString<THost, ModPos<TPositions> >&) [with THost = String<char, Alloc<> >; TPositions = Segment<String<long unsigned int, Alloc<> >, InfixSegment>; typename Size<ModifiedString<THost, ModPos<TPositions> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1086:31:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<String<char, Alloc<> >, ModPos<Segment<String<long unsigned int, Alloc<> >, InfixSegment> > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<char, Alloc<> >; TSpec = ModPos<Segment<String<long unsigned int, Alloc<> >, InfixSegment> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::ModifiedString<seqan::String<char, seqan::Alloc<> >, seqan::ModPos<seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment> > >; T2 = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::ModifiedString<seqan::String<char, seqan::Alloc<> >, seqan::ModPos<seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment> > >; T2 = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:371:9:   required from 'void SEQAN_TEST_test_modifier_modified_string_mod_pos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:116:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<long unsigned int, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<long unsigned int, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:609:22:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::begin(const ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = ModView<LowerFunctor>; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<Segment<String<char, Alloc<> >, InfixSegment>, ModView<LowerFunctor> >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<Segment<String<char, Alloc<> >, InfixSegment>, ModView<LowerFunctor> >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = ModView<LowerFunctor>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >; T2 = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >; T2 = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:320:9:   required from 'void SEQAN_TEST_test_modifier_modified_string_mod_view_segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:114:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:663:20:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::end(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = ModView<LowerFunctor>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<Segment<String<char, Alloc<> >, InfixSegment>, ModView<LowerFunctor> >; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<ModifiedString<Segment<String<char, Alloc<> >, InfixSegment>, ModView<LowerFunctor> >, Tag<ModReverse_> >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >, Tag<ModReverse_> >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >, ModView<LowerFunctor> >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<ModifiedString<Segment<String<char, Alloc<> >, InfixSegment>, ModView<LowerFunctor> >, Tag<ModReverse_> >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = ModifiedString<Segment<String<char, Alloc<> >, InfixSegment>, ModView<LowerFunctor> >; TSpec = Tag<ModReverse_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::ModifiedString<seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >, seqan::Tag<seqan::ModReverse_> >; T2 = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::ModifiedString<seqan::ModifiedString<seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<LowerFunctor> >, seqan::Tag<seqan::ModReverse_> >; T2 = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier_string.h:447:9:   required from 'void SEQAN_TEST_test_modifier_modified_string_reverse_segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier/test_modifier.cpp:120:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
[ 20%] Linking CXX executable ../../bin/test_misc
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/misc && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_misc.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_misc.dir/test_misc.cpp.o -o ../../bin/test_misc  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Built target test_misc
make  -f tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build.make tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier_cyclic_shape /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build.make tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Building CXX object tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier_cyclic_shape && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o -MF CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o.d -o CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h: In instantiation of 'seqan::String<typename seqan::Value<TContext>::Type> test_iterator(TString&, const seqan::CyclicShape<TSpec>&) [with TString = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::GappedShape<seqan::Tag<seqan::Default_> >; typename seqan::Value<TContext>::Type = char]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:195:33:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_iterator_generic_infix_charstring() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:52:13: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   52 |     TModStr modStr(str, shape);
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:214:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >::ModifiedString(typename seqan::Parameter_<TContainer>::Type, const TCyclicShape&) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::GappedShape<seqan::Tag<seqan::Default_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TCyclicShape = seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >]'
  214 |     ModifiedString(typename Parameter_<THost>::Type host, TCyclicShape const & shape) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:215:25:   required from 'seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >::ModifiedString(typename seqan::Parameter_<TContainer>::Type, const TCyclicShape&) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::GappedShape<seqan::Tag<seqan::Default_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TCyclicShape = seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:52:13:   required from 'seqan::String<typename seqan::Value<TContext>::Type> test_iterator(TString&, const seqan::CyclicShape<TSpec>&) [with TString = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::GappedShape<seqan::Tag<seqan::Default_> >; typename seqan::Value<TContext>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:195:33:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_iterator_generic_infix_charstring() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:386:15:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:128:32:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_modified_iterator() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:386:15:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:129:32:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_modified_iterator() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:386:15:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = const String<char, Alloc<> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:56:21:   required from 'seqan::String<typename seqan::Value<TContext>::Type> test_iterator(TString&, const seqan::CyclicShape<TSpec>&) [with TString = const seqan::String<char, seqan::Alloc<> >; TSpec = seqan::GappedShape<seqan::Tag<seqan::Default_> >; typename seqan::Value<TContext>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:175:33:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_iterator_generic_alloc_charstring() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<ModifiedIterator<Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >, Tag<ModReverse_> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<ModifiedString<const String<char, Alloc<> >, Tag<ModReverse_> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<ModifiedIterator<Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >, Tag<ModReverse_> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<ModifiedString<const String<char, Alloc<> >, Tag<ModReverse_> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:386:15:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = ModifiedString<const String<char, Alloc<> >, Tag<ModReverse_> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<ModifiedIterator<Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >, Tag<ModReverse_> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:56:21:   required from 'seqan::String<typename seqan::Value<TContext>::Type> test_iterator(TString&, const seqan::CyclicShape<TSpec>&) [with TString = seqan::ModifiedString<const seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ModReverse_> >; TSpec = seqan::GappedShape<seqan::Tag<seqan::Default_> >; typename seqan::Value<TContext>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:185:33:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_iterator_generic_mod_charstring() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:386:15:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:56:21:   required from 'seqan::String<typename seqan::Value<TContext>::Type> test_iterator(TString&, const seqan::CyclicShape<TSpec>&) [with TString = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::GappedShape<seqan::Tag<seqan::Default_> >; typename seqan::Value<TContext>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:195:33:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_iterator_generic_infix_charstring() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 2> >, 1> > > >; TSource = ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 2> >, 1> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 2> >, 1> > > >; TSource = ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 2> >, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:386:15:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = const String<char, Alloc<> >; TSpec = FixedShape<2, GappedShape<HardwiredShape<1, 2> >, 1>; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 2> >, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:56:21:   required from 'seqan::String<typename seqan::Value<TContext>::Type> test_iterator(TString&, const seqan::CyclicShape<TSpec>&) [with TString = const seqan::String<char, seqan::Alloc<> >; TSpec = seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 2> >, 1>; typename seqan::Value<TContext>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:208:33:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_iterator_fixed_alloc_charstring() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'constexpr seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 2> >, 1> >& seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 2> >, 1> >::operator=(const seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 2> >, 1> >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:288:5: note: because 'seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 2> >, 1> >' has user-provided 'seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >::CyclicShape(const seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >&) [with unsigned int LeftOffset = 2; unsigned int RightOffset = 1; int P00 = 1; int P01 = 2; int P02 = 0; int P03 = 0; int P04 = 0; int P05 = 0; int P06 = 0; int P07 = 0; int P08 = 0; int P09 = 0; int P10 = 0; int P11 = 0; int P12 = 0; int P13 = 0; int P14 = 0; int P15 = 0; int P16 = 0; int P17 = 0; int P18 = 0; int P19 = 0]'
  288 |     CyclicShape(CyclicShape const &)
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:427:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::end(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:689:15:   required from 'typename seqan::Size<seqan::ModifiedString<THost, seqan::ModCyclicShape<TSpec> > >::Type seqan::length(const ModifiedString<THost, ModCyclicShape<TSpec> >&) [with THost = String<char, Alloc<> >; TSpec = CyclicShape<GappedShape<Tag<Default_> > >; typename Size<ModifiedString<THost, ModCyclicShape<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:107:5:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_modified_string_functions() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_interface.h:387:15:   required from 'void seqan::goBegin(TIterator&, TContainer&) [with TIterator = const char*; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:530:12:   required from 'void seqan::goEnd(ModifiedIterator<THost, ModCyclicShape<CyclicShape<TSpec> > >&, TContainer&) [with THost = const char*; TSpec = GappedShape<Tag<Default_> >; TContainer = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:441:10:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::end(ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Standard_; typename Iterator<ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:57:22:   required from 'seqan::String<typename seqan::Value<TContext>::Type> test_iterator(TString&, const seqan::CyclicShape<TSpec>&) [with TString = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::GappedShape<seqan::Tag<seqan::Default_> >; typename seqan::Value<TContext>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:195:33:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_iterator_generic_infix_charstring() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:47:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:371:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = FixedShape<1, GappedShape<HardwiredShape<1> >, 0>; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<char, Alloc<> >; TSpec = ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::ModifiedString<seqan::String<char, seqan::Alloc<> >, seqan::ModCyclicShape<seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> > > >; T2 = char [11]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::ModifiedString<seqan::String<char, seqan::Alloc<> >, seqan::ModCyclicShape<seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> > > >; T2 = char [11]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:89:5:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_modified_string_construct() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'constexpr seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >& seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >::operator=(const seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:288:5: note: because 'seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >' has user-provided 'seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >::CyclicShape(const seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >&) [with unsigned int LeftOffset = 1; unsigned int RightOffset = 0; int P00 = 1; int P01 = 0; int P02 = 0; int P03 = 0; int P04 = 0; int P05 = 0; int P06 = 0; int P07 = 0; int P08 = 0; int P09 = 0; int P10 = 0; int P11 = 0; int P12 = 0; int P13 = 0; int P14 = 0; int P15 = 0; int P16 = 0; int P17 = 0; int P18 = 0; int P19 = 0]'
  288 |     CyclicShape(CyclicShape const &)
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:427:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::end(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = FixedShape<1, GappedShape<HardwiredShape<1> >, 0>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:689:15:   required from 'typename seqan::Size<seqan::ModifiedString<THost, seqan::ModCyclicShape<TSpec> > >::Type seqan::length(const ModifiedString<THost, ModCyclicShape<TSpec> >&) [with THost = String<char, Alloc<> >; TSpec = CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> >; typename Size<ModifiedString<THost, ModCyclicShape<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1086:31:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<char, Alloc<> >; TSpec = ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::ModifiedString<seqan::String<char, seqan::Alloc<> >, seqan::ModCyclicShape<seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> > > >; T2 = char [11]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::ModifiedString<seqan::String<char, seqan::Alloc<> >, seqan::ModCyclicShape<seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> > > >; T2 = char [11]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:89:5:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_modified_string_construct() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'constexpr seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >& seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >::operator=(const seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:288:5: note: because 'seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >' has user-provided 'seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >::CyclicShape(const seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >&) [with unsigned int LeftOffset = 1; unsigned int RightOffset = 0; int P00 = 1; int P01 = 0; int P02 = 0; int P03 = 0; int P04 = 0; int P05 = 0; int P06 = 0; int P07 = 0; int P08 = 0; int P09 = 0; int P10 = 0; int P11 = 0; int P12 = 0; int P13 = 0; int P14 = 0; int P15 = 0; int P16 = 0; int P17 = 0; int P18 = 0; int P19 = 0]'
  288 |     CyclicShape(CyclicShape const &)
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TSource = const ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TSource = const ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:371:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = const String<char, Alloc<> >; TSpec = FixedShape<1, GappedShape<HardwiredShape<1> >, 0>; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::ModifiedString<const seqan::String<char, seqan::Alloc<> >, seqan::ModCyclicShape<seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> > > >; T2 = char [11]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::ModifiedString<const seqan::String<char, seqan::Alloc<> >, seqan::ModCyclicShape<seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> > > >; T2 = char [11]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:92:5:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_modified_string_construct() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'constexpr seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >& seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >::operator=(const seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:288:5: note: because 'seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >' has user-provided 'seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >::CyclicShape(const seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >&) [with unsigned int LeftOffset = 1; unsigned int RightOffset = 0; int P00 = 1; int P01 = 0; int P02 = 0; int P03 = 0; int P04 = 0; int P05 = 0; int P06 = 0; int P07 = 0; int P08 = 0; int P09 = 0; int P10 = 0; int P11 = 0; int P12 = 0; int P13 = 0; int P14 = 0; int P15 = 0; int P16 = 0; int P17 = 0; int P18 = 0; int P19 = 0]'
  288 |     CyclicShape(CyclicShape const &)
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TSource = const ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; TSource = const ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:427:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::end(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = const String<char, Alloc<> >; TSpec = FixedShape<1, GappedShape<HardwiredShape<1> >, 0>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:689:15:   required from 'typename seqan::Size<seqan::ModifiedString<THost, seqan::ModCyclicShape<TSpec> > >::Type seqan::length(const ModifiedString<THost, ModCyclicShape<TSpec> >&) [with THost = const String<char, Alloc<> >; TSpec = CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> >; typename Size<ModifiedString<THost, ModCyclicShape<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1086:31:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<const String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = ModCyclicShape<CyclicShape<FixedShape<1, GappedShape<HardwiredShape<1> >, 0> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::ModifiedString<const seqan::String<char, seqan::Alloc<> >, seqan::ModCyclicShape<seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> > > >; T2 = char [11]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::ModifiedString<const seqan::String<char, seqan::Alloc<> >, seqan::ModCyclicShape<seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> > > >; T2 = char [11]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.h:92:5:   required from 'void SEQAN_TEST_test_modifier_cyclic_shape_modified_string_construct() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp:55:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'constexpr seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >& seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >::operator=(const seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:288:5: note: because 'seqan::CyclicShape<seqan::FixedShape<1, seqan::GappedShape<seqan::HardwiredShape<1> >, 0> >' has user-provided 'seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >::CyclicShape(const seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >&) [with unsigned int LeftOffset = 1; unsigned int RightOffset = 0; int P00 = 1; int P01 = 0; int P02 = 0; int P03 = 0; int P04 = 0; int P05 = 0; int P06 = 0; int P07 = 0; int P08 = 0; int P09 = 0; int P10 = 0; int P11 = 0; int P12 = 0; int P13 = 0; int P14 = 0; int P15 = 0; int P16 = 0; int P17 = 0; int P18 = 0; int P19 = 0]'
  288 |     CyclicShape(CyclicShape const &)
      |     ^~~~~~~~~~~
[ 20%] Linking CXX executable ../../bin/test_modifier
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_modifier.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_modifier.dir/test_modifier.cpp.o -o ../../bin/test_modifier  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Built target test_modifier
make  -f tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build.make tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build.make tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Building CXX object tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o -MF CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o.d -o CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units/test_multiple_translation_units.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units/test_multiple_translation_units.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 20%] Linking CXX executable ../../bin/test_modifier_cyclic_shape
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier_cyclic_shape && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_modifier_cyclic_shape.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o -o ../../bin/test_modifier_cyclic_shape  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Built target test_modifier_cyclic_shape
make  -f tests/parallel/CMakeFiles/test_parallel.dir/build.make tests/parallel/CMakeFiles/test_parallel.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parallel/CMakeFiles/test_parallel.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/parallel/CMakeFiles/test_parallel.dir/build.make tests/parallel/CMakeFiles/test_parallel.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Building CXX object tests/parallel/CMakeFiles/test_parallel.dir/test_parallel.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/parallel/CMakeFiles/test_parallel.dir/test_parallel.cpp.o -MF CMakeFiles/test_parallel.dir/test_parallel.cpp.o.d -o CMakeFiles/test_parallel.dir/test_parallel.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parallel/test_parallel.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units/test_multiple_translation_units.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units/test_multiple_translation_units.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parallel/test_parallel.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parallel/test_parallel.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 20%] Linking CXX executable ../../bin/test_parallel
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_parallel.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_parallel.dir/test_parallel.cpp.o -o ../../bin/test_parallel  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Built target test_parallel
make  -f tests/parse_lm/CMakeFiles/test_parse_lm.dir/build.make tests/parse_lm/CMakeFiles/test_parse_lm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parse_lm /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parse_lm /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parse_lm/CMakeFiles/test_parse_lm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/parse_lm/CMakeFiles/test_parse_lm.dir/build.make tests/parse_lm/CMakeFiles/test_parse_lm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 20%] Building CXX object tests/parse_lm/CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parse_lm && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/parse_lm/CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o -MF CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o.d -o CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parse_lm/test_parse_lm.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parse_lm/test_parse_lm.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parse_lm/test_parse_lm.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 20%] Building CXX object tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o -MF CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o.d -o CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units/test_multiple_translation_units_2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parse_lm.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parse_lm/test_parse_lm.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parse_lm/test_parse_lm.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units/test_multiple_translation_units_2.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units/test_multiple_translation_units_2.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units/test_multiple_translation_units_2.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 21%] Linking CXX executable ../../bin/test_parse_lm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parse_lm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_parse_lm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o -o ../../bin/test_parse_lm  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Built target test_parse_lm
make  -f tests/pipe/CMakeFiles/test_pipe.dir/build.make tests/pipe/CMakeFiles/test_pipe.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/pipe /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/pipe/CMakeFiles/test_pipe.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/pipe/CMakeFiles/test_pipe.dir/build.make tests/pipe/CMakeFiles/test_pipe.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Building CXX object tests/pipe/CMakeFiles/test_pipe.dir/test_pipe.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/pipe && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/pipe/CMakeFiles/test_pipe.dir/test_pipe.cpp.o -MF CMakeFiles/test_pipe.dir/test_pipe.cpp.o.d -o CMakeFiles/test_pipe.dir/test_pipe.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe/test_pipe.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe/test_pipe.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe/test_pipe.cpp:33:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe/test_pipe.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe/test_pipe.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe/test_pipe.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe/test_pipe.h:74:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   74 | struct IdentityMap : public std::unary_function< TValue, TValue >
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe/test_pipe.h:83:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   83 | struct SimpleCompare : public std::binary_function< TValue const, TValue const, int >
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 21%] Linking CXX executable ../../bin/test_multiple_translation_units
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_multiple_translation_units.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o -o ../../bin/test_multiple_translation_units  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Built target test_multiple_translation_units
make  -f tests/platform/CMakeFiles/test_platform.dir/build.make tests/platform/CMakeFiles/test_platform.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/platform /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/platform /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/platform/CMakeFiles/test_platform.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/platform/CMakeFiles/test_platform.dir/build.make tests/platform/CMakeFiles/test_platform.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Building CXX object tests/platform/CMakeFiles/test_platform.dir/test_platform.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/platform && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/platform/CMakeFiles/test_platform.dir/test_platform.cpp.o -MF CMakeFiles/test_platform.dir/test_platform.cpp.o.d -o CMakeFiles/test_platform.dir/test_platform.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/platform/test_platform.cpp
[ 21%] Linking CXX executable ../../bin/test_platform
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/platform && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_platform.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_platform.dir/test_platform.cpp.o -o ../../bin/test_platform  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Built target test_platform
make  -f tests/random/CMakeFiles/test_random.dir/build.make tests/random/CMakeFiles/test_random.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/random /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/random /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/random/CMakeFiles/test_random.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/random/CMakeFiles/test_random.dir/build.make tests/random/CMakeFiles/test_random.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Building CXX object tests/random/CMakeFiles/test_random.dir/test_random.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/random && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/random/CMakeFiles/test_random.dir/test_random.cpp.o -MF CMakeFiles/test_random.dir/test_random.cpp.o.d -o CMakeFiles/test_random.dir/test_random.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/random/test_random.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:65:
In member function 'seqan::Pipe<TInput, seqan::Sampler<m, TPack> >& seqan::Pipe<TInput, seqan::Sampler<m, TPack> >::operator++() [with TInput = seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >; unsigned int m = 3; TPack = seqan::Tag<seqan::Pack_>]',
    inlined from 'void comparePipeStream(TPipe&, const TStrings&) [with TPipe = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Sampler<3> >; TStrings = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe/test_pipe.cpp:330:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_sampler.h:203:49: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  203 |                         outRef->i2.i[skipped++] = 0;
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h: In function 'void comparePipeStream(TPipe&, const TStrings&) [with TPipe = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Sampler<3> >; TStrings = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/tuple_base.h:141:46: note: at offset 3 into destination object 'seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 3, seqan::Tag<seqan::Pack_> >::i' of size 3
  141 |     typename StoredTupleValue_<TValue>::Type i[SIZE];
      |                                              ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/random/test_random.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/random/test_random.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 21%] Linking CXX executable ../../bin/test_pipe
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/pipe && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_pipe.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_pipe.dir/test_pipe.cpp.o -o ../../bin/test_pipe  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Built target test_pipe
make  -f tests/realign/CMakeFiles/test_realign.dir/build.make tests/realign/CMakeFiles/test_realign.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/realign /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/realign/CMakeFiles/test_realign.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/realign/CMakeFiles/test_realign.dir/build.make tests/realign/CMakeFiles/test_realign.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Building CXX object tests/realign/CMakeFiles/test_realign.dir/test_realign.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/realign && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/realign/CMakeFiles/test_realign.dir/test_realign.cpp.o -MF CMakeFiles/test_realign.dir/test_realign.cpp.o.d -o CMakeFiles/test_realign.dir/test_realign.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp
[ 21%] Linking CXX executable ../../bin/test_random
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/random && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_random.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_random.dir/test_random.cpp.o -o ../../bin/test_random  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Built target test_random
make  -f tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build.make tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/reduced_aminoacid /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build.make tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Building CXX object tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/reduced_aminoacid && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o -MF CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o.d -o CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:241:24:   required from 'void _testReducedAminoAcidMurphy10ModIteratorsImpl(TModString&) [with TModString = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:270:50:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_moditerators() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:51:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>; TIterator = seqan::ModifiedIterator<seqan::SimpleType<unsigned char, seqan::AminoAcid_>*, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:247:17:   required from 'void _testReducedAminoAcidMurphy10ModIteratorsImpl(TModString&) [with TModString = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:270:50:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_moditerators() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:51:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>; TIterator = seqan::ModifiedIterator<seqan::SimpleType<unsigned char, seqan::AminoAcid_>*, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:241:24:   required from 'void _testReducedAminoAcidMurphy10ModIteratorsImpl(TModString&) [with TModString = seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:273:50:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_moditerators() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:51:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>; TIterator = seqan::ModifiedIterator<seqan::SimpleType<unsigned char, seqan::AminoAcid_>*, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:247:17:   required from 'void _testReducedAminoAcidMurphy10ModIteratorsImpl(TModString&) [with TModString = seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:273:50:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_moditerators() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:51:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>; TIterator = seqan::ModifiedIterator<seqan::SimpleType<unsigned char, seqan::AminoAcid_>*, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:322:29:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:322:55:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>; TIterator = seqan::ModifiedIterator<seqan::SimpleType<unsigned char, seqan::AminoAcid_>*, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12:   required from 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:241:24:   required from 'void _testReducedAminoAcidMurphy10ModIteratorsImpl(TModString&) [with TModString = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:270:50:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_moditerators() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:51:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>; TIterator = seqan::ModifiedIterator<seqan::SimpleType<unsigned char, seqan::AminoAcid_>*, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12:   required from 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:241:24:   required from 'void _testReducedAminoAcidMurphy10ModIteratorsImpl(TModString&) [with TModString = seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:273:50:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_moditerators() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:51:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >, void, ReducedFMIndexConfig_>, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:322:29:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::CompressedSA<seqan::StringSet<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Owner<seqan::ConcatDirect<> > >, void, ReducedFMIndexConfig_>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>, AdaptorIterator<ModifiedIterator<SimpleType<unsigned char, AminoAcid_>*, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>; T2 = char [28]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>; T2 = char [28]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:304:5:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>; TIterator = seqan::ModifiedIterator<seqan::SimpleType<unsigned char, seqan::AminoAcid_>*, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >; TSpec = Owner<ConcatDirect<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Source<> >, Caster<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Source<> >, Caster<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Source<> >, Caster<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Source<> >, Caster<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Source<> >, Caster<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Source<> >, Caster<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ModifiedString<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::ModView<seqan::FunctorConvert<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > > > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > >, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = void; TConfig = ReducedFMIndexConfig_; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<ModifiedString<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, ModView<FunctorConvert<SimpleType<unsigned char, AminoAcid_>, SimpleType<unsigned char, ReducedAminoAcid_<Tag<Murphy10_> > > > > >, Owner<ConcatDirect<> > >; TSpec = FMIndex<void, ReducedFMIndexConfig_>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.h:313:17:   required from 'void SEQAN_TEST_test_reduced_aminoacid_murphy10_modview_fmindex() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid/test_reduced_aminoacid.cpp:52:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:78:23:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:78:23:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:78:23:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h: In instantiation of 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:404:32: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  404 |             for (TReadGapsIter itR2 = itR; itR2 != itREnd; ++itR2)
      |                                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = int; TCount = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:607:15:   required from 'void SEQAN_TEST_test_realign_tricky_insert_window_cuts() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:666:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:78:23:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:78:23:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Standard_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:395:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:280:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = unsigned int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:930:19:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::_endContig(unsigned int) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:697:5:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:606:11:   required from 'void SEQAN_TEST_test_realign_tricky_insert_window_cuts() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:666:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:56:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:17:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:382:27:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:81:16:   required from 'void SEQAN_TEST_test_realign_one_read_no_gaps() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign/test_realign.cpp:653:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
[ 21%] Linking CXX executable ../../bin/test_realign
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/realign && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_realign.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_realign.dir/test_realign.cpp.o -o ../../bin/test_realign  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Built target test_realign
make  -f tests/rna_io/CMakeFiles/test_rna_io.dir/build.make tests/rna_io/CMakeFiles/test_rna_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/rna_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/rna_io/CMakeFiles/test_rna_io.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/rna_io/CMakeFiles/test_rna_io.dir/build.make tests/rna_io/CMakeFiles/test_rna_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Building CXX object tests/rna_io/CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/rna_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/rna_io/CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o -MF CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o.d -o CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Connect_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Connect_>, TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<RnaStruct_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::RnaStruct_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:55:28:   required from 'void SEQAN_TEST_test_rna_io_read_connect() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Stockholm_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Connect_>, TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<RnaStruct_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::RnaStruct_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:55:28:   required from 'void SEQAN_TEST_test_rna_io_read_connect() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = DotBracket_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Connect_>, TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<RnaStruct_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::RnaStruct_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:55:28:   required from 'void SEQAN_TEST_test_rna_io_read_connect() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vienna_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Connect_>, TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<RnaStruct_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::RnaStruct_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:55:28:   required from 'void SEQAN_TEST_test_rna_io_read_connect() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Ebpseq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Connect_>, TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<RnaStruct_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::RnaStruct_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:55:28:   required from 'void SEQAN_TEST_test_rna_io_read_connect() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bpseq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Connect_>, TagList<Tag<Stockholm_>, TagList<Tag<DotBracket_>, TagList<Tag<Vienna_>, TagList<Tag<Ebpseq_>, TagList<Tag<Bpseq_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<RnaStruct_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::RnaStruct_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:55:28:   required from 'void SEQAN_TEST_test_rna_io_read_connect() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:44:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io/rna_record.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = seqan::RnaRecord; _Args = {const seqan::RnaRecord&}]':
/usr/include/c++/13/bits/stl_uninitialized.h:120:21:   required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const seqan::RnaRecord*; _ForwardIterator = seqan::RnaRecord*]'
/usr/include/c++/13/bits/stl_uninitialized.h:137:32:   required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const seqan::RnaRecord*; _ForwardIterator = seqan::RnaRecord*; bool _TrivialValueTypes = false]'
/usr/include/c++/13/bits/stl_uninitialized.h:185:15:   required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const seqan::RnaRecord*; _ForwardIterator = seqan::RnaRecord*]'
/usr/include/c++/13/bits/stl_uninitialized.h:373:37:   required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = const seqan::RnaRecord*; _ForwardIterator = seqan::RnaRecord*; _Tp = seqan::RnaRecord]'
/usr/include/c++/13/bits/vector.tcc:781:34:   required from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = const seqan::RnaRecord*; _Tp = seqan::RnaRecord; _Alloc = std::allocator<seqan::RnaRecord>; iterator = std::vector<seqan::RnaRecord>::iterator]'
/usr/include/c++/13/bits/stl_vector.h:1486:19:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:973:11:   required from 'void seqan::insert(T&&, TPosition, const TSeq&) [with T = std::vector<RnaRecord>&; TPosition = long unsigned int; TSeq = RnaRecord]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/adapt_stl_container.h:910:11:   required from 'typename seqan::EnableIf<seqan::And<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, seqan::Not<seqan::FixedSize_<typename seqan::RemoveReference<T>::Type> > >, void>::Type seqan::append(TContainer&&, const TSource&, const Tag<TExpand>&) [with TContainer = std::vector<RnaRecord>&; TSource = RnaRecord; TExpand = TagGenerous_; typename EnableIf<And<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, Not<FixedSize_<typename RemoveReference<T>::Type> > >, void>::Type = void; typename RemoveReference<T>::Type = std::vector<RnaRecord>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:903:11:   required from 'void seqan::append(TTarget&&, const TSource&) [with TTarget = std::vector<RnaRecord>&; TSource = RnaRecord]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io/rna_struct_file.h:315:15:   required from 'void seqan::readRecords(RnaStructContents&, FormattedFile<Tag<RnaStruct_>, Tag<Input_>, TSpec>&, TSize) [with TSpec = void; TSize = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:355:23:   required from 'void SEQAN_TEST_test_rna_io_read_ebpseq() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io/rna_record.h:119:7: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  119 | class RnaRecord
      |       ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /usr/include/c++/13/bits/alloc_traits.h:33,
                 from /usr/include/c++/13/ext/alloc_traits.h:34,
                 from /usr/include/c++/13/bits/basic_string.h:39,
                 from /usr/include/c++/13/string:54:
/usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'seqan::RnaRecord::RnaRecord(const seqan::RnaRecord&)' first required here
  119 |       ::new((void*)__p) _Tp(std::forward<_Args>(__args)...);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io/rna_record.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = seqan::RnaRecord; _Args = {seqan::RnaRecord}]':
/usr/include/c++/13/bits/stl_uninitialized.h:120:21:   required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator<seqan::RnaRecord*>; _ForwardIterator = seqan::RnaRecord*]'
/usr/include/c++/13/bits/stl_uninitialized.h:137:32:   required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<seqan::RnaRecord*>; _ForwardIterator = seqan::RnaRecord*; bool _TrivialValueTypes = false]'
/usr/include/c++/13/bits/stl_uninitialized.h:185:15:   required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator<seqan::RnaRecord*>; _ForwardIterator = seqan::RnaRecord*]'
/usr/include/c++/13/bits/stl_uninitialized.h:373:37:   required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator<seqan::RnaRecord*>; _ForwardIterator = seqan::RnaRecord*; _Tp = seqan::RnaRecord]'
/usr/include/c++/13/bits/stl_uninitialized.h:384:41:   required from '_ForwardIterator std::__uninitialized_move_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = seqan::RnaRecord*; _ForwardIterator = seqan::RnaRecord*; _Allocator = allocator<seqan::RnaRecord>]'
/usr/include/c++/13/bits/vector.tcc:766:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:973:11:   required from 'void seqan::insert(T&&, TPosition, const TSeq&) [with T = std::vector<RnaRecord>&; TPosition = long unsigned int; TSeq = RnaRecord]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/adapt_stl_container.h:910:11:   required from 'typename seqan::EnableIf<seqan::And<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, seqan::Not<seqan::FixedSize_<typename seqan::RemoveReference<T>::Type> > >, void>::Type seqan::append(TContainer&&, const TSource&, const Tag<TExpand>&) [with TContainer = std::vector<RnaRecord>&; TSource = RnaRecord; TExpand = TagGenerous_; typename EnableIf<And<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, Not<FixedSize_<typename RemoveReference<T>::Type> > >, void>::Type = void; typename RemoveReference<T>::Type = std::vector<RnaRecord>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:903:11:   required from 'void seqan::append(TTarget&&, const TSource&) [with TTarget = std::vector<RnaRecord>&; TSource = RnaRecord]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io/rna_struct_file.h:315:15:   required from 'void seqan::readRecords(RnaStructContents&, FormattedFile<Tag<RnaStruct_>, Tag<Input_>, TSpec>&, TSize) [with TSpec = void; TSize = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.h:355:23:   required from 'void SEQAN_TEST_test_rna_io_read_ebpseq() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io/test_rna_io.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io/rna_record.h:119:7: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  119 | class RnaRecord
      |       ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'seqan::RnaRecord::RnaRecord(seqan::RnaRecord&&)' first required here
  119 |       ::new((void*)__p) _Tp(std::forward<_Args>(__args)...);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Linking CXX executable ../../bin/test_reduced_aminoacid
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/reduced_aminoacid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_reduced_aminoacid.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o -o ../../bin/test_reduced_aminoacid  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/roi_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/roi_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/roi_io/CMakeFiles/test_roi_io.dir/DependInfo.cmake "--color="
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make  -f tests/roi_io/CMakeFiles/test_roi_io.dir/build.make tests/roi_io/CMakeFiles/test_roi_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Building CXX object tests/roi_io/CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/roi_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/roi_io/CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o -MF CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o.d -o CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/roi_io/test_roi_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/roi_io/test_roi_io.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/roi_io/test_roi_io.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Roi_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Roi_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/roi_io/test_roi_io.cpp:95:22:   required from 'void SEQAN_TEST_test_roi_roi_file_read() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/roi_io/test_roi_io.cpp:215:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 21%] Linking CXX executable ../../bin/test_roi_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/roi_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_roi_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o -o ../../bin/test_roi_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Built target test_roi_io
make  -f tests/score/CMakeFiles/test_score.dir/build.make tests/score/CMakeFiles/test_score.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/score /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/score /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/score/CMakeFiles/test_score.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/score/CMakeFiles/test_score.dir/build.make tests/score/CMakeFiles/test_score.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Building CXX object tests/score/CMakeFiles/test_score.dir/test_score.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/score && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/score/CMakeFiles/test_score.dir/test_score.cpp.o -MF CMakeFiles/test_score.dir/test_score.cpp.o.d -o CMakeFiles/test_score.dir/test_score.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/score/test_score.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io/ebpseq_read_write.h: In lambda function:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_exception.h:158:29: warning: 'pairPos' may be used uninitialized [-Wmaybe-uninitialized]
  158 | #define SEQAN_THROW(E)      throw E
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io/ebpseq_read_write.h:307:21: note: in expansion of macro 'SEQAN_THROW'
  307 |                     SEQAN_THROW(BadLexicalCast(pairPos, buffer));
      |                     ^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io.h:67:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/rna_io/ebpseq_read_write.h:282:22: note: 'pairPos' declared here
  282 |             unsigned pairPos;
      |                      ^~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/score/test_score.cpp:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/score/test_score.cpp:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/score/test_score.cpp:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 22%] Linking CXX executable ../../bin/test_rna_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/rna_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_rna_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o -o ../../bin/test_rna_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 22%] Built target test_rna_io
make  -f tests/seeds/CMakeFiles/test_seeds_combination.dir/build.make tests/seeds/CMakeFiles/test_seeds_combination.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_combination.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_combination.dir/build.make tests/seeds/CMakeFiles/test_seeds_combination.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o -MF CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o.d -o CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_combination.cpp
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<TagScoreMatrixFile_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<TagScoreMatrixFile_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<TagScoreMatrixFile_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, AminoAcid_>; TSpec = Tag<TagScoreMatrixFile_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 22%] Linking CXX executable ../../bin/test_score
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/score && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_score.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_score.dir/test_score.cpp.o -o ../../bin/test_score  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 22%] Built target test_score
make  -f tests/seeds/CMakeFiles/test_seeds_extension.dir/build.make tests/seeds/CMakeFiles/test_seeds_extension.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_extension.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_extension.dir/build.make tests/seeds/CMakeFiles/test_seeds_extension.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o -MF CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o.d -o CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_extension.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_combination.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_combination.cpp:42:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_combination.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_extension.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_extension.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_extension.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 22%] Linking CXX executable ../../bin/test_seeds_combination
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_combination.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o -o ../../bin/test_seeds_combination  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 22%] Built target test_seeds_combination
make  -f tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build.make tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build.make tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Building CXX object tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o -MF CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o.d -o CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_global_chaining.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_global_chaining.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_global_chaining.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_global_chaining.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 23%] Linking CXX executable ../../bin/test_seeds_extension
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_extension.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o -o ../../bin/test_seeds_extension  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_extension
make  -f tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o -MF CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o.d -o CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_base.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_base.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 23%] Linking CXX executable ../../bin/test_seeds_global_chaining
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_global_chaining.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o -o ../../bin/test_seeds_global_chaining  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_global_chaining
make  -f tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_base.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 23%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o -MF CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o.d -o CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_chained.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_chained.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_chained.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_chained.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 23%] Linking CXX executable ../../bin/test_seeds_seed_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o -o ../../bin/test_seeds_seed_base  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_seed_base
make  -f tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/depend
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 23%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o -MF CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o.d -o CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_diagonal.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 23%] Linking CXX executable ../../bin/test_seeds_seed_chained
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_chained.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o -o ../../bin/test_seeds_seed_chained  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_diagonal.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_diagonal.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_seed_chained
make  -f tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o -MF CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o.d -o CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_set_base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_diagonal.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_set_base.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_set_base.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_set_base.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 23%] Linking CXX executable ../../bin/test_seeds_seed_diagonal
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_diagonal.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o -o ../../bin/test_seeds_seed_diagonal  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_seed_diagonal
make  -f tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o -MF CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o.d -o CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_set_unordered.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_set_unordered.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_set_unordered.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_seeds_seed_set_unordered.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 23%] Linking CXX executable ../../bin/test_seeds_seed_set_unordered
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_set_unordered.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o -o ../../bin/test_seeds_seed_set_unordered  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_seed_set_unordered
make  -f tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build.make tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build.make tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Building CXX object tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o -MF CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o.d -o CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp
[ 23%] Linking CXX executable ../../bin/test_seeds_seed_set_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_set_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o -o ../../bin/test_seeds_seed_set_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_seed_set_base
make  -f tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build.make tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build.make tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Building CXX object tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o -MF CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o.d -o CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/refwrap.h:39,
                 from /usr/include/c++/13/vector:68,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TIterator = const SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, SuffixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, SuffixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, Dna_>; TSeqVValue = SimpleType<unsigned char, Dna_>; TSeqVIterator = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<AffineGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, Dna_>; TSeqVValue = SimpleType<unsigned char, Dna_>; TSeqVIterator = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TIterator = const SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:419:41:   required from 'TScoreValue seqan::bandedChainAlignment(String<Fragment<TSize, TSpec>, TStringSpec>&, const StringSet<TSequence, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TFirstRow, TFirstColumn, TLastColumn, TLastRow, TACSpec>&, unsigned int) [with TSize = unsigned int; TFragmentSpec = ExactFragment<>; TStringSpec = Alloc<>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:1950:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_fragments_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2526:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = char; TSeqVValue = char; TSeqVIterator = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<AffineGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = char; TSeqVValue = char; TSeqVIterator = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, SuffixSegment>; TIterator = const char*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:270:41:   required from 'TScoreValue seqan::bandedChainAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TSeeds&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequenceH = String<char, Alloc<> >; TGapSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapSpecV = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:668:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_gaps_linear_global_two_score() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:270:41:   required from 'TScoreValue seqan::bandedChainAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TSeeds&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequenceH = String<char, Alloc<> >; TGapSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapSpecV = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:668:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_gaps_linear_global_two_score() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:270:41:   required from 'TScoreValue seqan::bandedChainAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TSeeds&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequenceH = String<char, Alloc<> >; TGapSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapSpecV = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:668:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_gaps_linear_global_two_score() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> >, Alloc<> >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1012:35:   required from 'void SEQAN_TEST_test_banded_chain_alignment_issue_1020() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1109:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:419:41:   required from 'TScoreValue seqan::bandedChainAlignment(String<Fragment<TSize, TSpec>, TStringSpec>&, const StringSet<TSequence, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TFirstRow, TFirstColumn, TLastColumn, TLastRow, TACSpec>&, unsigned int) [with TSize = unsigned int; TFragmentSpec = ExactFragment<>; TStringSpec = Alloc<>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:1950:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_fragments_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2526:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:419:41:   required from 'TScoreValue seqan::bandedChainAlignment(String<Fragment<TSize, TSpec>, TStringSpec>&, const StringSet<TSequence, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TFirstRow, TFirstColumn, TLastColumn, TLastRow, TACSpec>&, unsigned int) [with TSize = unsigned int; TFragmentSpec = ExactFragment<>; TStringSpec = Alloc<>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:1950:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_fragments_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2526:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:419:41:   required from 'TScoreValue seqan::bandedChainAlignment(String<Fragment<TSize, TSpec>, TStringSpec>&, const StringSet<TSequence, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TFirstRow, TFirstColumn, TLastColumn, TLastRow, TACSpec>&, unsigned int) [with TSize = unsigned int; TFragmentSpec = ExactFragment<>; TStringSpec = Alloc<>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:1950:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_fragments_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2526:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, True, True, True>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:221:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = SeedSet<Seed<Tag<Simple_> >, Tag<Unordered_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = true; bool TLastColumn = true; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:68:37:   required from 'void testBandedChainAlignmentEmptyChain(const TGapCosts&) [with TGapCosts = seqan::Tag<seqan::LinearGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1020:39:   required from 'void SEQAN_TEST_test_banded_chain_alignment_empty_set_linear() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_align_banded_chain_impl.cpp:1097:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = char; TSeqVValue = char; TSeqVIterator = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<AffineGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = char; TSeqVValue = char; TSeqVIterator = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, SuffixSegment>; TIterator = const char*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:270:41:   required from 'TScoreValue seqan::bandedChainAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TSeeds&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequenceH = String<char, Alloc<> >; TGapSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapSpecV = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:668:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_gaps_linear_global_two_score() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:270:41:   required from 'TScoreValue seqan::bandedChainAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TSeeds&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequenceH = String<char, Alloc<> >; TGapSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapSpecV = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:668:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_gaps_linear_global_two_score() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = char; TSeqVValue = SimpleType<unsigned char, Dna5_>; TSeqVIterator = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<AffineGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = char; TSeqVValue = SimpleType<unsigned char, Dna5_>; TSeqVIterator = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:270:41:   required from 'TScoreValue seqan::bandedChainAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TSeeds&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequenceH = String<char, Alloc<> >; TGapSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapSpecV = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:668:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_gaps_linear_global_two_score() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:419:41:   required from 'TScoreValue seqan::bandedChainAlignment(String<Fragment<TSize, TSpec>, TStringSpec>&, const StringSet<TSequence, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TFirstRow, TFirstColumn, TLastColumn, TLastRow, TACSpec>&, unsigned int) [with TSize = unsigned int; TFragmentSpec = ExactFragment<>; TStringSpec = Alloc<>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:1950:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_fragments_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2526:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<char, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<char, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:123:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_align_linear_global_two_scores() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2487:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<char, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<char, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:270:41:   required from 'TScoreValue seqan::bandedChainAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TSeeds&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequenceH = String<char, Alloc<> >; TGapSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapSpecV = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:668:42:   required from 'void SEQAN_TEST_test_banded_chain_alignment_gaps_linear_global_two_score() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds/test_banded_chain_alignment_interface.cpp:2500:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 23%] Linking CXX executable ../../bin/test_seeds_align_banded_chain_impl
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_align_banded_chain_impl.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o -o ../../bin/test_seeds_align_banded_chain_impl  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_align_banded_chain_impl
make  -f tests/seq_io/CMakeFiles/test_seq_io.dir/build.make tests/seq_io/CMakeFiles/test_seq_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seq_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seq_io/CMakeFiles/test_seq_io.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seq_io/CMakeFiles/test_seq_io.dir/build.make tests/seq_io/CMakeFiles/test_seq_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Building CXX object tests/seq_io/CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seq_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/seq_io/CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o -MF CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o.d -o CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io/test_seq_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io/test_seq_io.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io/test_seq_io.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io/test_seq_io.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io/test_read_bam.h:53:51:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io/test_read_bam.h:53:51:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io/test_read_bam.h:53:51:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io/test_write_bam.h:51:52:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io/test_read_bam.h:53:51:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 24%] Linking CXX executable ../../bin/test_seq_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seq_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seq_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o -o ../../bin/test_seq_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Built target test_seq_io
make  -f tests/sequence/CMakeFiles/test_sequence.dir/build.make tests/sequence/CMakeFiles/test_sequence.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence/CMakeFiles/test_sequence.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/sequence/CMakeFiles/test_sequence.dir/build.make tests/sequence/CMakeFiles/test_sequence.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Building CXX object tests/sequence/CMakeFiles/test_sequence.dir/test_sequence.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/sequence/CMakeFiles/test_sequence.dir/test_sequence.cpp.o -MF CMakeFiles/test_sequence.dir/test_sequence.cpp.o.d -o CMakeFiles/test_sequence.dir/test_sequence.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In instantiation of 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:91:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1191:34: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1191 |     Test_Assignments_Combinatoric(str1, str5, Exact());
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note:   initializing argument 2 of 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::TagExact_; size_t = long unsigned int]'
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1192:34: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1192 |     Test_Assignments_Combinatoric(str1, str5, Generous());
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note:   initializing argument 2 of 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::TagGenerous_; size_t = long unsigned int]'
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1193:34: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1193 |     Test_Assignments_Combinatoric(str1, str5, Limit());
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note:   initializing argument 2 of 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::TagLimit_; size_t = long unsigned int]'
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1195:34: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1195 |     Test_Assignments_Combinatoric(str1, str5, Exact(), 3);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note:   initializing argument 2 of 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::TagExact_; size_t = long unsigned int]'
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1196:34: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1196 |     Test_Assignments_Combinatoric(str1, str5, Generous(), 3);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note:   initializing argument 2 of 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::TagGenerous_; size_t = long unsigned int]'
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1197:34: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1197 |     Test_Assignments_Combinatoric(str1, str5, Limit(), 3);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note:   initializing argument 2 of 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::TagLimit_; size_t = long unsigned int]'
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In instantiation of 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:792:32: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  792 |     Infix<String<char> >::Type infix_2(infix_1);
      |                                ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:866:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  866 |     Suffix<String<char> >::Type suffix_2(suffix_1);
      |                                 ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_segment.h: In instantiation of 'void SEQAN_TEST_Infix() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:103:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_segment.h:51:32: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
   51 |     Infix<String<char> >::Type infix_2(infix_1);
      |                                ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_segment.h: In instantiation of 'void SEQAN_TEST_Suffix() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:104:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_segment.h:160:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  160 |     Suffix<String<char> >::Type suffix_2(suffix_1);
      |                                 ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In instantiation of 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::TagExact_; size_t = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1191:34:   required from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:91:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In instantiation of 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::TagGenerous_; size_t = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1192:34:   required from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:91:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In instantiation of 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TExpand = seqan::TagLimit_; size_t = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1193:34:   required from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:91:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<char, Alloc<> >, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_segment.h:256:5:   required from 'void SEQAN_TEST_ticket317() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:105:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:815:5:   required from 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:497:15:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(T&) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:817:5:   required from 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:820:5:   required from 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:821:5:   required from 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:888:5:   required from 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:497:15:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(T&) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:890:5:   required from 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:893:5:   required from 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:894:5:   required from 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<char, Alloc<> >, InfixSegment>; TIterator = char*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_segment.h:256:5:   required from 'void SEQAN_TEST_ticket317() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:105:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12:   required from 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:888:5:   required from 'void SEQAN_TEST_Segment() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:93:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<char, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<char, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<char, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<char, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<char, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = char; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<char, seqan::InfixSegment>; T2 = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<char, seqan::InfixSegment>; T2 = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1109:9:   required from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagExact_; size_t = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1200:34:   required from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:91:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<char, seqan::InfixSegment>::Segment(const seqan::Segment<char, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<char, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = char]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<char, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<char, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = char; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<char, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<char, seqan::InfixSegment>; TIterator = char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<char, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<char, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<char, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<char, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<char, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<char, InfixSegment>, AdaptorIterator<char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<char, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = char; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:946:71:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<char, seqan::InfixSegment>; T2 = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<char, seqan::InfixSegment>; T2 = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1109:9:   required from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagExact_; size_t = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1200:34:   required from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.cpp:91:2:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<char, seqan::InfixSegment>::Segment(const seqan::Segment<char, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<char, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = char]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void seqan::appendValue(StringSet<TString1, Owner<ConcatDirect<TSpec1> > >&, const TString2&, Tag<TUsage>) [with TString = String<char, Alloc<> >; TString2 = char [1]; TSpec = void; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_concat_direct.h:403:11,
    inlined from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<char, Alloc<> >, Owner<ConcatDirect<> > >&; TSource = const char (&)[1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16,
    inlined from 'void Test_StringSet_Concat() [with TSpec = seqan::Owner<seqan::ConcatDirect<> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_stringset.h:112:16:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void Test_String_Base_Assignments(TMe&) [with TExpand = seqan::Tag<seqan::TagGenerous_>; TMe = seqan::String<char, seqan::Alloc<> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:204:11:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagExact_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagExact_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void Test_String_Base_Assignments(TMe&) [with TExpand = seqan::Tag<seqan::TagExact_>; TMe = seqan::String<char, seqan::Alloc<> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:204:11:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void seqan::append(TTarget&&, const TSource&) [with TTarget = String<char, Alloc<> >&; TSource = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:903:11,
    inlined from 'seqan::String<TValue, TSpec>& seqan::operator+=(String<TValue, TSpec>&, const TRight&) [with TLeftValue = char; TLeftSpec = Alloc<>; TRight = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1811:11,
    inlined from 'void SEQAN_TEST_String_Base() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:335:10:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object '<anonymous>' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_String_Base() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:335:10: note: '<anonymous>' declared here
  335 |     str1 += 'x';
      |     ~~~~~^~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = char*; TSource = const char; TExpand = seqan::Tag<seqan::TagInsist_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(TTargetValue*, const TSource&, Tag<TExpand>) [with TTargetValue = char; TSource = char; TExpand = TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/adapt_array_pointer.h:498:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1106:11:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source' with type 'char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note: 'source' declared here
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&, typename seqan::Size<T>::Type) [with TTarget = char*; TSource = const char; TExpand = seqan::Tag<seqan::TagInsist_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1258:31,
    inlined from 'void seqan::append(TTargetValue*, const TSource&, size_t, Tag<TExpand>) [with TTargetValue = char; TSource = char; TExpand = TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/adapt_array_pointer.h:508:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1113:11:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source' with type 'char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note: 'source' declared here
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = char*; TSource = const char; TExpand = seqan::Tag<seqan::TagInsist_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(TTargetValue*, const TSource&, Tag<TExpand>) [with TTargetValue = char; TSource = char; TExpand = TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/adapt_array_pointer.h:498:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1120:11:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source_const' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: note: 'source_const' declared here
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&, typename seqan::Size<T>::Type) [with TTarget = char*; TSource = const char; TExpand = seqan::Tag<seqan::TagInsist_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1258:31,
    inlined from 'void seqan::append(TTargetValue*, const TSource&, size_t, Tag<TExpand>) [with TTargetValue = char; TSource = char; TExpand = TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/adapt_array_pointer.h:508:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1121:11:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source_const' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: note: 'source_const' declared here
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::ReplaceString_<TExpand>::replace_(TTarget&, typename seqan::Size<T>::Type, typename seqan::Size<T>::Type, TSource&, typename seqan::Size<T>::Type) [with TTarget = char*; TSource = const char; TExpand = seqan::Tag<seqan::TagInsist_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1450:31,
    inlined from 'void seqan::replace(TTargetValue*, size_t, size_t, const TSource&, size_t, Tag<TExpand>) [with TTargetValue = char; TSource = char; TExpand = TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/adapt_array_pointer.h:557:44,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1134:12:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source' with type 'char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note: 'source' declared here
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::ReplaceString_<TExpand>::replace_(TTarget&, typename seqan::Size<T>::Type, typename seqan::Size<T>::Type, TSource&, typename seqan::Size<T>::Type) [with TTarget = char*; TSource = const char; TExpand = seqan::Tag<seqan::TagInsist_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1450:31,
    inlined from 'void seqan::replace(TTargetValue*, size_t, size_t, const TSource&, size_t, Tag<TExpand>) [with TTargetValue = char; TSource = char; TExpand = TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/adapt_array_pointer.h:557:44,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1147:12:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source' with type 'char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1089:62: note: 'source' declared here
 1089 | void Test_Assignments_Combinatoric(TTarget & target, TSource source, Tag<TExpand> tag, size_t limit = ~0)
      |                                                      ~~~~~~~~^~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::ReplaceString_<TExpand>::replace_(TTarget&, typename seqan::Size<T>::Type, typename seqan::Size<T>::Type, TSource&, typename seqan::Size<T>::Type) [with TTarget = char*; TSource = const char; TExpand = seqan::Tag<seqan::TagInsist_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1450:31,
    inlined from 'void seqan::replace(TTargetValue*, size_t, size_t, const TSource&, size_t, Tag<TExpand>) [with TTargetValue = char; TSource = char; TExpand = TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/adapt_array_pointer.h:557:44,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1153:12:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source_const' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = char [800]; TSource = char; TExpand = seqan::TagInsist_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: note: 'source_const' declared here
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagExact_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagExact_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagExact_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1106:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1200:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source' with type 'char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:1613:10: note: 'source' declared here
 1613 |     void SEQAN_TEST_ ## test_name()
      |          ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1156:1: note: in expansion of macro 'SEQAN_DEFINE_TEST'
 1156 | SEQAN_DEFINE_TEST(Combinatoric)
      | ^~~~~~~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&, typename seqan::Size<T>::Type) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagExact_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1258:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, typename Size<String<TValue, TSpec> >::Type, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagExact_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1297:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagExact_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1113:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1200:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source' with type 'char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:1613:10: note: 'source' declared here
 1613 |     void SEQAN_TEST_ ## test_name()
      |          ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1156:1: note: in expansion of macro 'SEQAN_DEFINE_TEST'
 1156 | SEQAN_DEFINE_TEST(Combinatoric)
      | ^~~~~~~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagExact_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagExact_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagExact_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1120:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1200:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source_const' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: note: 'source_const' declared here
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&, typename seqan::Size<T>::Type) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagExact_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1258:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, typename Size<String<TValue, TSpec> >::Type, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagExact_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1297:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagExact_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1121:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1200:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source_const' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: note: 'source_const' declared here
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&, typename seqan::Size<T>::Type) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1258:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, typename Size<String<TValue, TSpec> >::Type, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1297:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1113:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1201:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source' with type 'char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:1613:10: note: 'source' declared here
 1613 |     void SEQAN_TEST_ ## test_name()
      |          ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1156:1: note: in expansion of macro 'SEQAN_DEFINE_TEST'
 1156 | SEQAN_DEFINE_TEST(Combinatoric)
      | ^~~~~~~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&, typename seqan::Size<T>::Type) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1258:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, typename Size<String<TValue, TSpec> >::Type, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1297:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1121:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1201:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source_const' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: note: 'source_const' declared here
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagLimit_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagLimit_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagLimit_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1106:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1202:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source' with type 'char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:1613:10: note: 'source' declared here
 1613 |     void SEQAN_TEST_ ## test_name()
      |          ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1156:1: note: in expansion of macro 'SEQAN_DEFINE_TEST'
 1156 | SEQAN_DEFINE_TEST(Combinatoric)
      | ^~~~~~~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&, typename seqan::Size<T>::Type) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagLimit_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1258:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, typename Size<String<TValue, TSpec> >::Type, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagLimit_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1297:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagLimit_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1113:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1202:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source' with type 'char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:1613:10: note: 'source' declared here
 1613 |     void SEQAN_TEST_ ## test_name()
      |          ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1156:1: note: in expansion of macro 'SEQAN_DEFINE_TEST'
 1156 | SEQAN_DEFINE_TEST(Combinatoric)
      | ^~~~~~~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagLimit_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagLimit_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagLimit_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1120:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1202:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source_const' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: note: 'source_const' declared here
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&, typename seqan::Size<T>::Type) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char; TExpand = seqan::Tag<seqan::TagLimit_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1258:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, typename Size<String<TValue, TSpec> >::Type, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char; TExpand = TagLimit_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1297:42,
    inlined from 'void Test_Assignments_Combinatoric(TTarget&, TSource, seqan::Tag<TExpand>, size_t) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = char; TExpand = seqan::TagLimit_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1121:11,
    inlined from 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1202:34:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] of object 'source_const' with type 'const char' [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h: In function 'void SEQAN_TEST_Combinatoric() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string.h:1097:19: note: 'source_const' declared here
 1097 |     TSource const source_const(source);
      |                   ^~~~~~~~~~~~
[ 24%] Linking CXX executable ../../bin/test_sequence
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sequence.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_sequence.dir/test_sequence.cpp.o -o ../../bin/test_sequence  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Built target test_sequence
make  -f tests/sequence/CMakeFiles/test_sequence_v2.dir/build.make tests/sequence/CMakeFiles/test_sequence_v2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence/CMakeFiles/test_sequence_v2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/sequence/CMakeFiles/test_sequence_v2.dir/build.make tests/sequence/CMakeFiles/test_sequence_v2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Building CXX object tests/sequence/CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/sequence/CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o -MF CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o.d -o CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence_v2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence_v2.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence_v2.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceValue(TString&) [with TString = std::__cxx11::list<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1810:22:   required from 'void StringTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::__cxx11::list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1805:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1769:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1769 |     ref = 'G';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceFront(TString&) [with TString = std::__cxx11::list<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1393:22:   required from 'void StringTestCommon__Front<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::__cxx11::list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1388:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1371:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1371 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceBack(TString&) [with TString = std::__cxx11::list<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:   required from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::__cxx11::list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1079:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceValue(TString&) [with TString = std::forward_list<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1810:22:   required from 'void StringTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::forward_list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1805:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1769:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1769 |     ref = 'G';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceFront(TString&) [with TString = std::forward_list<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1393:22:   required from 'void StringTestCommon__Front<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::forward_list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1388:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1371:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1371 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceBack(TString&) [with TString = std::forward_list<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:   required from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::forward_list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1079:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceValue(TString&) [with TString = std::deque<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1810:22:   required from 'void StringTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::deque<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1805:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1769:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1769 |     ref = 'G';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceFront(TString&) [with TString = std::deque<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1393:22:   required from 'void StringTestCommon__Front<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::deque<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1388:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1371:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1371 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceBack(TString&) [with TString = std::deque<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:   required from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::deque<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1079:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceValue(TString&) [with TString = std::vector<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1810:22:   required from 'void StringTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::vector<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1805:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1769:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1769 |     ref = 'G';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceFront(TString&) [with TString = std::vector<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1393:22:   required from 'void StringTestCommon__Front<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::vector<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1388:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1371:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1371 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceBack(TString&) [with TString = std::vector<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:   required from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::vector<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1079:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceValue(TString&) [with TString = seqan::String<CountingChar, seqan::Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1810:22:   required from 'void StringTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1805:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1769:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1769 |     ref = 'G';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceFront(TString&) [with TString = seqan::String<CountingChar, seqan::Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1393:22:   required from 'void StringTestCommon__Front<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1388:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1371:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1371 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceBack(TString&) [with TString = seqan::String<CountingChar, seqan::Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:   required from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1079:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceValue(TString&) [with TString = seqan::String<CountingChar, seqan::Block<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1810:22:   required from 'void StringTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::Block<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1805:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1769:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1769 |     ref = 'G';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceFront(TString&) [with TString = seqan::String<CountingChar, seqan::Block<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1393:22:   required from 'void StringTestCommon__Front<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::Block<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1388:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1371:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1371 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceBack(TString&) [with TString = seqan::String<CountingChar, seqan::Block<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:   required from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::Block<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1079:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceValue(TString&) [with TString = seqan::String<CountingChar, seqan::Array<100> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1810:22:   required from 'void StringTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::Array<100> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1805:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1769:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1769 |     ref = 'G';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceFront(TString&) [with TString = seqan::String<CountingChar, seqan::Array<100> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1393:22:   required from 'void StringTestCommon__Front<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::Array<100> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1388:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1371:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1371 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceBack(TString&) [with TString = seqan::String<CountingChar, seqan::Array<100> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:   required from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::Array<100> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1079:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceFront(TString&) [with TString = seqan::String<CountingChar, seqan::MMap<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1393:22:   required from 'void StringTestCommon__Front<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::MMap<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1388:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1371:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1371 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceBack(TString&) [with TString = seqan::String<CountingChar, seqan::MMap<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:   required from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::MMap<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1079:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceFront(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1393:22:   required from 'void StringTestCommon__Front<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1388:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1371:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1371 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In instantiation of 'void testSequenceBack(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:   required from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1079:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = CountingChar; TSource = char; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:785:15:   required from 'void testSequenceOperatorAssign(TString&) [with TString = std::__cxx11::list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:795:31:   required from 'void StringTestCommon__OperatorAssign<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::__cxx11::list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:790:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = CountingChar; TSource = CountingChar; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:702:11:   required from 'void seqan::assignValue(T&, TPos, const TValue&) [with T = std::__cxx11::list<CountingChar>; TValue = CountingChar; TPos = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:937:16:   required from 'void testSequenceAssignValue(TString&) [with TString = std::__cxx11::list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:946:28:   required from 'void StringTestCommon__AssignValue<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::__cxx11::list<CountingChar>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:941:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [1]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [1]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1671:11:   required from 'void testSequenceReserve(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1704:24:   required from 'void StringTestCommon__Reserve<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1699:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [11]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [11]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1561:11:   required from 'void testSequenceLength(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1570:23:   required from 'void StringTestCommon__Length<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1565:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [2]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1516:15:   required from 'void testSequenceIter(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1543:21:   required from 'void StringTestCommon__Iter<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1538:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [5]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1528:15:   required from 'void testSequenceIter(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1543:21:   required from 'void StringTestCommon__Iter<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1538:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [13]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [13]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1337:15:   required from 'void testSequenceEraseBack(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1356:26:   required from 'void StringTestCommon__EraseBack<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1351:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [12]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [12]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1339:15:   required from 'void testSequenceEraseBack(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1356:26:   required from 'void StringTestCommon__EraseBack<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1351:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::append(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = String<CountingChar, External<> >; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:903:11:   required from 'void seqan::append(TTarget&&, const TSource&) [with TTarget = String<CountingChar, External<> >&; TSource = String<CountingChar, External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:964:15:   required from 'void testSequenceAppend(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1008:23:   required from 'void StringTestCommon__Append<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1003:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2098:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2098 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [25]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [25]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:998:15:   required from 'void testSequenceAppend(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1008:23:   required from 'void StringTestCommon__Append<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1003:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [3]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:935:11:   required from 'void testSequenceAssignValue(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:946:28:   required from 'void StringTestCommon__AssignValue<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:941:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [6]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [6]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:905:15:   required from 'void testSequenceReverse(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:922:24:   required from 'void StringTestCommon__Reverse<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:917:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = String<CountingChar, External<> >; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:983:11:   required from 'void seqan::assign(String<TValue, TSpec>&, TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = String<CountingChar, External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:774:15:   required from 'void testSequenceOperatorAssign(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:795:31:   required from 'void StringTestCommon__OperatorAssign<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:790:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h: In instantiation of 'void seqan::assign(String<TValue, External<TConfig> >&, const TSource&, Tag<TUsage>) [with TValue = CountingChar; TConfig = ExternalConfigLarge<>; TSource = char [4]; TExpand = TagGenerous_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11:   required from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = CountingChar; TTargetSpec = External<>; TSource = char [4]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:405:15:   required from 'void testSequenceLessEqual(TString&) [with TString = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:424:26:   required from 'void StringTestCommon__LessEqualOperator<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::String<CountingChar, seqan::External<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:419:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:2171:24: warning: implicitly-declared 'constexpr CountingChar& CountingChar::operator=(const CountingChar&)' is deprecated [-Wdeprecated-copy]
 2171 |             *it_target = *it_source;
      |             ~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:69:5: note: because 'CountingChar' has user-provided 'CountingChar::CountingChar(const CountingChar&)'
   69 |     CountingChar(CountingChar const & other) : value(other.value)
      |     ^~~~~~~~~~~~
[ 24%] Linking CXX executable ../../bin/test_seeds_banded_chain_alignment_interface
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o -o ../../bin/test_seeds_banded_chain_alignment_interface  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Built target test_seeds_banded_chain_alignment_interface
make  -f tests/sequence/CMakeFiles/test_stringset_v2.dir/build.make tests/sequence/CMakeFiles/test_stringset_v2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence/CMakeFiles/test_stringset_v2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/sequence/CMakeFiles/test_stringset_v2.dir/build.make tests/sequence/CMakeFiles/test_stringset_v2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Building CXX object tests/sequence/CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/sequence/CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o -MF CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o.d -o CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_stringset_v2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_stringset_v2.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_stringset_v2.cpp:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h: In instantiation of 'void testStringSetIter(TStringSet&) [with TStringSet = const seqan::StringSet<seqan::String<char, seqan::Packed<> >, seqan::Owner<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1566:22:   required from 'void StringSetTestCommon__Iter<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<char, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1558:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1516:22: warning: implicitly-declared 'seqan::String<char, seqan::Packed<> >::String(const seqan::String<char, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
 1516 |         SEQAN_ASSERT(TString(*iterator) == "AAAA");
      |                      ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<char, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = char; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1537:22: warning: implicitly-declared 'seqan::String<char, seqan::Packed<> >::String(const seqan::String<char, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
 1537 |         SEQAN_ASSERT(TString(*iterator) == "TTTT");
      |                      ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<char, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = char; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h: In instantiation of 'void testStringSetBegin(TStringSet&) [with TStringSet = const seqan::StringSet<seqan::String<char, seqan::Packed<> >, seqan::Owner<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:887:23:   required from 'void StringSetTestCommon__Begin<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<char, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:879:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:855:18: warning: implicitly-declared 'seqan::String<char, seqan::Packed<> >::String(const seqan::String<char, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  855 |     SEQAN_ASSERT(TString(*begin(stringSet)) == str);
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<char, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = char; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:856:18: warning: implicitly-declared 'seqan::String<char, seqan::Packed<> >::String(const seqan::String<char, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  856 |     SEQAN_ASSERT(TString(*begin(stringSet, Standard())) == str);
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<char, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = char; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:857:18: warning: implicitly-declared 'seqan::String<char, seqan::Packed<> >::String(const seqan::String<char, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  857 |     SEQAN_ASSERT(TString(*begin(stringSet, Rooted())) == str);
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<char, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = char; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h: In instantiation of 'void testStringSetIter(TStringSet&) [with TStringSet = const seqan::StringSet<seqan::String<short int, seqan::Packed<> >, seqan::Owner<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1566:22:   required from 'void StringSetTestCommon__Iter<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<short int, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1558:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1516:22: warning: implicitly-declared 'seqan::String<short int, seqan::Packed<> >::String(const seqan::String<short int, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
 1516 |         SEQAN_ASSERT(TString(*iterator) == "AAAA");
      |                      ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<short int, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = short int; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1537:22: warning: implicitly-declared 'seqan::String<short int, seqan::Packed<> >::String(const seqan::String<short int, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
 1537 |         SEQAN_ASSERT(TString(*iterator) == "TTTT");
      |                      ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<short int, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = short int; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h: In instantiation of 'void testStringSetBegin(TStringSet&) [with TStringSet = const seqan::StringSet<seqan::String<short int, seqan::Packed<> >, seqan::Owner<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:887:23:   required from 'void StringSetTestCommon__Begin<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<short int, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:879:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:855:18: warning: implicitly-declared 'seqan::String<short int, seqan::Packed<> >::String(const seqan::String<short int, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  855 |     SEQAN_ASSERT(TString(*begin(stringSet)) == str);
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<short int, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = short int; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:856:18: warning: implicitly-declared 'seqan::String<short int, seqan::Packed<> >::String(const seqan::String<short int, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  856 |     SEQAN_ASSERT(TString(*begin(stringSet, Standard())) == str);
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<short int, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = short int; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:857:18: warning: implicitly-declared 'seqan::String<short int, seqan::Packed<> >::String(const seqan::String<short int, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  857 |     SEQAN_ASSERT(TString(*begin(stringSet, Rooted())) == str);
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<short int, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = short int; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h: In instantiation of 'void testStringSetIter(TStringSet&) [with TStringSet = const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1566:22:   required from 'void StringSetTestCommon__Iter<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1558:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1516:22: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
 1516 |         SEQAN_ASSERT(TString(*iterator) == "AAAA");
      |                      ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1537:22: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
 1537 |         SEQAN_ASSERT(TString(*iterator) == "TTTT");
      |                      ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h: In instantiation of 'void testStringSetBegin(TStringSet&) [with TStringSet = const seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:887:23:   required from 'void StringSetTestCommon__Begin<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:879:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:855:18: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  855 |     SEQAN_ASSERT(TString(*begin(stringSet)) == str);
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:856:18: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  856 |     SEQAN_ASSERT(TString(*begin(stringSet, Standard())) == str);
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:857:18: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  857 |     SEQAN_ASSERT(TString(*begin(stringSet, Rooted())) == str);
      |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:2224:44: note: in definition of macro 'SEQAN_ASSERT'
 2224 |                                           (_arg1), # _arg1)) {           \
      |                                            ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::String<char, seqan::Packed<> >, seqan::Alloc<> >; TValue = const seqan::String<char, seqan::Packed<> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = String<char, Packed<> >; TTargetSpec = Alloc<>; TValue = const String<char, Packed<> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = String<char, Packed<> >; TString2 = String<char, Packed<> >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<char, Packed<> >, Owner<> >&; TSource = String<char, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1826:16:   required from 'void testStringSetValue(TStringSet&) [with TStringSet = seqan::StringSet<seqan::String<char, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1898:23:   required from 'void StringSetTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<char, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1893:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::String<char, seqan::Packed<> >::String(const seqan::String<char, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<char, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = char; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::String<short int, seqan::Packed<> >, seqan::Alloc<> >; TValue = const seqan::String<short int, seqan::Packed<> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = String<short int, Packed<> >; TTargetSpec = Alloc<>; TValue = const String<short int, Packed<> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = String<short int, Packed<> >; TString2 = String<short int, Packed<> >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<short int, Packed<> >, Owner<> >&; TSource = String<short int, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1826:16:   required from 'void testStringSetValue(TStringSet&) [with TStringSet = seqan::StringSet<seqan::String<short int, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1898:23:   required from 'void StringSetTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<short int, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1893:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::String<short int, seqan::Packed<> >::String(const seqan::String<short int, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<short int, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = short int; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Alloc<> >; TValue = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; TTargetSpec = Alloc<>; TValue = const String<SimpleType<unsigned char, Dna_>, Packed<> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = String<SimpleType<unsigned char, Dna_>, Packed<> >; TString2 = String<SimpleType<unsigned char, Dna_>, Packed<> >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<> >&; TSource = String<SimpleType<unsigned char, Dna_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1826:16:   required from 'void testStringSetValue(TStringSet&) [with TStringSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1898:23:   required from 'void StringSetTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1893:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<char, seqan::Packed<> >*; TParam = seqan::String<char, seqan::Packed<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<char, Packed<> >*; TParam = String<char, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::String<char, seqan::Packed<> >, seqan::Alloc<> >; TValue = const char (&)[5]; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = String<char, Packed<> >; TTargetSpec = Alloc<>; TValue = const char (&)[5]; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = String<char, Packed<> >; TString2 = char [5]; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<char, Packed<> >, Owner<> >&; TSource = char (&)[5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:2259:16:   required from 'void StringSetTestCommon__SuffixOnValue<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<char, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:2249:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<char, seqan::Packed<> >::String(const seqan::String<char, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<char, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = char; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<short int, seqan::Packed<> >*; TParam = seqan::String<short int, seqan::Packed<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<short int, Packed<> >*; TParam = String<short int, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::String<short int, seqan::Packed<> >, seqan::Alloc<> >; TValue = const char (&)[5]; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = String<short int, Packed<> >; TTargetSpec = Alloc<>; TValue = const char (&)[5]; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = String<short int, Packed<> >; TString2 = char [5]; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<short int, Packed<> >, Owner<> >&; TSource = char (&)[5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:2259:16:   required from 'void StringSetTestCommon__SuffixOnValue<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<short int, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:2249:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<short int, seqan::Packed<> >::String(const seqan::String<short int, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<short int, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = short int; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >*; TParam = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<SimpleType<unsigned char, Dna_>, Packed<> >*; TParam = String<SimpleType<unsigned char, Dna_>, Packed<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Alloc<> >; TValue = const char (&)[5]; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; TTargetSpec = Alloc<>; TValue = const char (&)[5]; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = String<SimpleType<unsigned char, Dna_>, Packed<> >; TString2 = char [5]; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<> >&; TSource = char (&)[5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:2259:16:   required from 'void StringSetTestCommon__SuffixOnValue<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:2249:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<char, seqan::Packed<> >*; TParam = const seqan::String<char, seqan::Packed<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<char, Packed<> >*; TParam = const String<char, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::String<char, seqan::Packed<> >, seqan::Alloc<> >; TValue = const seqan::String<char, seqan::Packed<> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = String<char, Packed<> >; TTargetSpec = Alloc<>; TValue = const String<char, Packed<> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = String<char, Packed<> >; TString2 = String<char, Packed<> >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<char, Packed<> >, Owner<> >&; TSource = String<char, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1826:16:   required from 'void testStringSetValue(TStringSet&) [with TStringSet = seqan::StringSet<seqan::String<char, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1898:23:   required from 'void StringSetTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<char, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1893:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<char, seqan::Packed<> >::String(const seqan::String<char, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<char, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = char; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<short int, seqan::Packed<> >*; TParam = const seqan::String<short int, seqan::Packed<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<short int, Packed<> >*; TParam = const String<short int, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::String<short int, seqan::Packed<> >, seqan::Alloc<> >; TValue = const seqan::String<short int, seqan::Packed<> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = String<short int, Packed<> >; TTargetSpec = Alloc<>; TValue = const String<short int, Packed<> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = String<short int, Packed<> >; TString2 = String<short int, Packed<> >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<short int, Packed<> >, Owner<> >&; TSource = String<short int, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1826:16:   required from 'void testStringSetValue(TStringSet&) [with TStringSet = seqan::StringSet<seqan::String<short int, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1898:23:   required from 'void StringSetTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<short int, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1893:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<short int, seqan::Packed<> >::String(const seqan::String<short int, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<short int, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = short int; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >*; TParam = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = String<SimpleType<unsigned char, Dna_>, Packed<> >*; TParam = const String<SimpleType<unsigned char, Dna_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Alloc<> >; TValue = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = String<SimpleType<unsigned char, Dna_>, Packed<> >; TTargetSpec = Alloc<>; TValue = const String<SimpleType<unsigned char, Dna_>, Packed<> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = String<SimpleType<unsigned char, Dna_>, Packed<> >; TString2 = String<SimpleType<unsigned char, Dna_>, Packed<> >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<String<SimpleType<unsigned char, Dna_>, Packed<> >, Owner<> >&; TSource = String<SimpleType<unsigned char, Dna_>, Packed<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1826:16:   required from 'void testStringSetValue(TStringSet&) [with TStringSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1898:23:   required from 'void StringSetTestCommon__Value<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >, seqan::Owner<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_string_set.h:1893:1:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >::String(const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In function 'void testSequenceBack(TString&) [with TString = std::forward_list<CountingChar>]',
    inlined from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::forward_list<CountingChar>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:5: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
 1062 |     val = 'A';
      |     ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In member function 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::forward_list<CountingChar>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1057:13: note: at offset 8 into destination object 'string' of size 8
 1057 |     TString string;
      |             ^~~~~~
In function 'void testSequenceBack(TString&) [with TString = std::forward_list<char>]',
    inlined from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::forward_list<char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
 1062 |     val = 'A';
      |     ~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In member function 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::forward_list<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1057:13: note: at offset 8 into destination object 'string' of size 8
 1057 |     TString string;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_alphabet.h:93,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_container.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:71:
In function 'void seqan::assign(Dna5&, char)',
    inlined from 'seqan::SimpleType<TValue, TSpec>& seqan::SimpleType<TValue, TSpec>::operator=(const T&) [with T = char; TValue = unsigned char; TSpec = seqan::Dna5_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/alphabet_simple_type.h:167:15,
    inlined from 'void testSequenceBack(TString&) [with TString = std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1062:9,
    inlined from 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1084:21:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/alphabet_residue.h:719:18: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  719 |     target.value = TranslateTableCharToDna5_<>::VALUE[(unsigned char) c_source];
      |     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h: In member function 'void StringTestCommon__Back<SEQAN_TParam>::runTest() [with SEQAN_TParam = std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence/test_sequence.h:1057:13: note: at offset 8 into destination object 'string' of size 8
 1057 |     TString string;
      |             ^~~~~~
[ 24%] Linking CXX executable ../../bin/test_stringset_v2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_stringset_v2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o -o ../../bin/test_stringset_v2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Built target test_stringset_v2
make  -f tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/build.make tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence_journaled /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/build.make tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Building CXX object tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence_journaled && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o -MF CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o.d -o CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled/test_sequence_journaled.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled/test_sequence_journaled.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled/test_sequence_journaled.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::__cxx11::basic_stringstream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::__cxx11::basic_stringstream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence_journaled/sequence_journaled.h:385:20:   required from 'TStream& seqan::operator<<(TStream&, const String<TValue, Journaled<THostSpec, TJournalSpec, TBufferSpec> >&) [with TStream = std::__cxx11::basic_stringstream<char>; TValue = char; THostSpec = Alloc<>; TJournalSpec = SortedArray; TBufferSpec = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled/test_sequence_journaled.h:70:14:   required from 'void testJournaledStringAssign(const TStringJournalSpec&) [with TStringJournalSpec = seqan::SortedArray]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled/test_sequence_journaled.h:1179:30:   required from 'void SEQAN_TEST_test_sequence_journaled_sorted_array_assign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled/test_sequence_journaled.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::__cxx11::basic_stringstream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::__cxx11::basic_stringstream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence_journaled/sequence_journaled.h:385:20:   required from 'TStream& seqan::operator<<(TStream&, const String<TValue, Journaled<THostSpec, TJournalSpec, TBufferSpec> >&) [with TStream = std::__cxx11::basic_stringstream<char>; TValue = char; THostSpec = Alloc<>; TJournalSpec = SortedArray; TBufferSpec = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled/test_sequence_journaled.h:70:14:   required from 'void testJournaledStringAssign(const TStringJournalSpec&) [with TStringJournalSpec = seqan::SortedArray]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled/test_sequence_journaled.h:1179:30:   required from 'void SEQAN_TEST_test_sequence_journaled_sorted_array_assign() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled/test_sequence_journaled.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 24%] Linking CXX executable ../../bin/test_sequence_journaled
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence_journaled && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sequence_journaled.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o -o ../../bin/test_sequence_journaled  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Built target test_sequence_journaled
make  -f tests/simd/CMakeFiles/test_simd_vector.dir/build.make tests/simd/CMakeFiles/test_simd_vector.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/simd/CMakeFiles/test_simd_vector.dir/build.make tests/simd/CMakeFiles/test_simd_vector.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Building CXX object tests/simd/CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/simd/CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o -MF CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o.d -o CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simd/test_simd_vector.cpp
[ 24%] Linking CXX executable ../../bin/test_simd_vector
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_simd_vector.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o -o ../../bin/test_simd_vector  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Built target test_simd_vector
make  -f tests/simd/CMakeFiles/test_simd_vector_sse4.dir/build.make tests/simd/CMakeFiles/test_simd_vector_sse4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector_sse4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/simd/CMakeFiles/test_simd_vector_sse4.dir/build.make tests/simd/CMakeFiles/test_simd_vector_sse4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 24%] Building CXX object tests/simd/CMakeFiles/test_simd_vector_sse4.dir/test_simd_vector.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -msse4 -MD -MT tests/simd/CMakeFiles/test_simd_vector_sse4.dir/test_simd_vector.cpp.o -MF CMakeFiles/test_simd_vector_sse4.dir/test_simd_vector.cpp.o.d -o CMakeFiles/test_simd_vector_sse4.dir/test_simd_vector.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simd/test_simd_vector.cpp
[ 25%] Linking CXX executable ../../bin/test_simd_vector_sse4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_simd_vector_sse4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_simd_vector_sse4.dir/test_simd_vector.cpp.o -o ../../bin/test_simd_vector_sse4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Built target test_simd_vector_sse4
make  -f tests/simd/CMakeFiles/test_simd_vector_avx2.dir/build.make tests/simd/CMakeFiles/test_simd_vector_avx2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector_avx2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/simd/CMakeFiles/test_simd_vector_avx2.dir/build.make tests/simd/CMakeFiles/test_simd_vector_avx2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Building CXX object tests/simd/CMakeFiles/test_simd_vector_avx2.dir/test_simd_vector.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -mavx2 -MD -MT tests/simd/CMakeFiles/test_simd_vector_avx2.dir/test_simd_vector.cpp.o -MF CMakeFiles/test_simd_vector_avx2.dir/test_simd_vector.cpp.o.d -o CMakeFiles/test_simd_vector_avx2.dir/test_simd_vector.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simd/test_simd_vector.cpp
[ 25%] Linking CXX executable ../../bin/test_sequence_v2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sequence_v2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o -o ../../bin/test_sequence_v2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Built target test_sequence_v2
make  -f tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/build.make tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simple_intervals_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simple_intervals_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/build.make tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Building CXX object tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simple_intervals_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o -MF CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o.d -o CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simple_intervals_io/test_simple_intervals_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simple_intervals_io/test_simple_intervals_io.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simple_intervals_io/test_simple_intervals_io.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 25%] Linking CXX executable ../../bin/test_simple_intervals_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simple_intervals_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_simple_intervals_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o -o ../../bin/test_simple_intervals_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Built target test_simple_intervals_io
make  -f tests/statistics/CMakeFiles/test_statistics.dir/build.make tests/statistics/CMakeFiles/test_statistics.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/statistics /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/statistics/CMakeFiles/test_statistics.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/statistics/CMakeFiles/test_statistics.dir/build.make tests/statistics/CMakeFiles/test_statistics.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Building CXX object tests/statistics/CMakeFiles/test_statistics.dir/test_statistics.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/statistics && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/statistics/CMakeFiles/test_statistics.dir/test_statistics.cpp.o -MF CMakeFiles/test_statistics.dir/test_statistics.cpp.o.d -o CMakeFiles/test_statistics.dir/test_statistics.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:84,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h: In instantiation of 'static void seqan::WuManberImpl_<TNeedle, Q>::initialize(TPattern&) [with TNeedle = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; int Q = 2; TPattern = seqan::Pattern<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::WuManber_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:399:57:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Tag<WuManber_> >&) [with TNeedle = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<WuManber_>; TNeedle2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:97:16:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::WuManber_> >::Pattern(TNeedle2&&, typename seqan::DisableIf<seqan::IsSameType<const typename std::remove_reference<_Up>::type&, const seqan::Pattern<TNeedle, seqan::Tag<seqan::WuManber_> >&> >::Type*) [with TNeedle2 = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&; TNeedle = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; typename seqan::DisableIf<seqan::IsSameType<const typename std::remove_reference<_Up>::type&, const seqan::Pattern<TNeedle, seqan::Tag<seqan::WuManber_> >&> >::Type = void; typename std::remove_reference<_Up>::type = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics/statistics_base.h:103:56:   required from 'void seqan::_numOccurrences(TFloat&, String<TCargo>&, StringSet<String<TCargo> >&, const TAlgorithm&) [with TAlgorithm = Tag<WuManber_>; TFloat = double; TAlphabet = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics/statistics_base.h:356:24:   required from 'TFloat seqan::zscore(StringSet<TSequence>, StringSet<TSequence>&, MarkovModel<SimpleType<unsigned char, Dna_>, TFloat, TSpec>&, const TAlgorithm&) [with TAlgorithm = Tag<WuManber_>; TFloat = double; TSpec = Tag<Default_>; TDnaSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics_base.h:183:21:   required from 'void SEQAN_TEST_test_statistics_statistics() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics.cpp:48:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:187:18: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  187 |         for (pit = begin(needle(me)); pit != pit_end; ++pit)
      |              ~~~~^~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:216:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  216 |         pit = begin(needle(me));
      |         ~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h: In instantiation of 'static void seqan::WuManberImpl_<TNeedle, Q>::initialize(TPattern&) [with TNeedle = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; int Q = 3; TPattern = seqan::Pattern<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::WuManber_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:400:62:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Tag<WuManber_> >&) [with TNeedle = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<WuManber_>; TNeedle2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:97:16:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::WuManber_> >::Pattern(TNeedle2&&, typename seqan::DisableIf<seqan::IsSameType<const typename std::remove_reference<_Up>::type&, const seqan::Pattern<TNeedle, seqan::Tag<seqan::WuManber_> >&> >::Type*) [with TNeedle2 = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&; TNeedle = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; typename seqan::DisableIf<seqan::IsSameType<const typename std::remove_reference<_Up>::type&, const seqan::Pattern<TNeedle, seqan::Tag<seqan::WuManber_> >&> >::Type = void; typename std::remove_reference<_Up>::type = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics/statistics_base.h:103:56:   required from 'void seqan::_numOccurrences(TFloat&, String<TCargo>&, StringSet<String<TCargo> >&, const TAlgorithm&) [with TAlgorithm = Tag<WuManber_>; TFloat = double; TAlphabet = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics/statistics_base.h:356:24:   required from 'TFloat seqan::zscore(StringSet<TSequence>, StringSet<TSequence>&, MarkovModel<SimpleType<unsigned char, Dna_>, TFloat, TSpec>&, const TAlgorithm&) [with TAlgorithm = Tag<WuManber_>; TFloat = double; TSpec = Tag<Default_>; TDnaSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics_base.h:183:21:   required from 'void SEQAN_TEST_test_statistics_statistics() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics.cpp:48:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:187:18: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  187 |         for (pit = begin(needle(me)); pit != pit_end; ++pit)
      |              ~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:216:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  216 |         pit = begin(needle(me));
      |         ~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h: In instantiation of 'static void seqan::WuManberImpl_<TNeedle, Q>::initialize(TPattern&) [with TNeedle = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; int Q = 1; TPattern = seqan::Pattern<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::WuManber_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:401:47:   required from 'void seqan::_reinitPattern(Pattern<TNeedle, Tag<WuManber_> >&) [with TNeedle = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:255:19:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<WuManber_>; TNeedle2 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:97:16:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::WuManber_> >::Pattern(TNeedle2&&, typename seqan::DisableIf<seqan::IsSameType<const typename std::remove_reference<_Up>::type&, const seqan::Pattern<TNeedle, seqan::Tag<seqan::WuManber_> >&> >::Type*) [with TNeedle2 = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&; TNeedle = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; typename seqan::DisableIf<seqan::IsSameType<const typename std::remove_reference<_Up>::type&, const seqan::Pattern<TNeedle, seqan::Tag<seqan::WuManber_> >&> >::Type = void; typename std::remove_reference<_Up>::type = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics/statistics_base.h:103:56:   required from 'void seqan::_numOccurrences(TFloat&, String<TCargo>&, StringSet<String<TCargo> >&, const TAlgorithm&) [with TAlgorithm = Tag<WuManber_>; TFloat = double; TAlphabet = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics/statistics_base.h:356:24:   required from 'TFloat seqan::zscore(StringSet<TSequence>, StringSet<TSequence>&, MarkovModel<SimpleType<unsigned char, Dna_>, TFloat, TSpec>&, const TAlgorithm&) [with TAlgorithm = Tag<WuManber_>; TFloat = double; TSpec = Tag<Default_>; TDnaSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics_base.h:183:21:   required from 'void SEQAN_TEST_test_statistics_statistics() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics/test_statistics.cpp:48:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:187:18: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  187 |         for (pit = begin(needle(me)); pit != pit_end; ++pit)
      |              ~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_wumanber.h:216:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  216 |         pit = begin(needle(me));
      |         ~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
[ 25%] Linking CXX executable ../../bin/test_simd_vector_avx2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_simd_vector_avx2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_simd_vector_avx2.dir/test_simd_vector.cpp.o -o ../../bin/test_simd_vector_avx2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Built target test_simd_vector_avx2
make  -f tests/store/CMakeFiles/test_store.dir/build.make tests/store/CMakeFiles/test_store.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/store /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/store /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/store/CMakeFiles/test_store.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/store/CMakeFiles/test_store.dir/build.make tests/store/CMakeFiles/test_store.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Building CXX object tests/store/CMakeFiles/test_store.dir/test_store.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/store && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/store/CMakeFiles/test_store.dir/test_store.cpp.o -MF CMakeFiles/test_store.dir/test_store.cpp.o.d -o CMakeFiles/test_store.dir/test_store.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 25%] Linking CXX executable ../../bin/test_statistics
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_statistics.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_statistics.dir/test_statistics.cpp.o -o ../../bin/test_statistics  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Built target test_statistics
make  -f tests/stream/CMakeFiles/test_stream.dir/build.make tests/stream/CMakeFiles/test_stream.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/stream /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/stream/CMakeFiles/test_stream.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/stream/CMakeFiles/test_stream.dir/build.make tests/stream/CMakeFiles/test_stream.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Building CXX object tests/stream/CMakeFiles/test_stream.dir/test_stream.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/stream && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/stream/CMakeFiles/test_stream.dir/test_stream.cpp.o -MF CMakeFiles/test_stream.dir/test_stream.cpp.o.d -o CMakeFiles/test_stream.dir/test_stream.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::QualityExtractor<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:745:69:   required from 'void seqan::write(TTarget&, FragmentStore<TSpec, TConfig>&, Amos) [with TTarget = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; Amos = const Tag<TagAmos_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:762:10:   required from 'void SEQAN_TEST_test_store_io_readwrite_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Ucsc_<UcscKnownGene_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Ucsc_<> >; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Ucsc_<> >; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:50:16:   required from 'void SEQAN_TEST_test_store_io_read_ucsc_known_genes() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:43:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:346:15:   required from 'void SEQAN_TEST_test_store_io_read_gff() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:48:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/tokenization.h:489:23:   required from 'void seqan::writeWrappedString(TTarget&, const TSequence&, TSize) [with TTarget = Iter<std::basic_fstream<char>, StreamIterator<Tag<Output_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:740:27:   required from 'void seqan::write(TTarget&, FragmentStore<TSpec, TConfig>&, Amos) [with TTarget = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; Amos = const Tag<TagAmos_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:762:10:   required from 'void SEQAN_TEST_test_store_io_readwrite_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:98:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::begin(const ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = ModView<QualityExtractor<SimpleType<unsigned char, Dna5Q_> > >; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<QualityExtractor<SimpleType<unsigned char, Dna5Q_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/tokenization.h:489:23:   required from 'void seqan::writeWrappedString(TTarget&, const TSequence&, TSize) [with TTarget = Iter<std::basic_fstream<char>, StreamIterator<Tag<Output_> > >; TSequence = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<QualityExtractor<SimpleType<unsigned char, Dna5Q_> > > >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:746:27:   required from 'void seqan::write(TTarget&, FragmentStore<TSpec, TConfig>&, Amos) [with TTarget = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; Amos = const Tag<TagAmos_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:762:10:   required from 'void SEQAN_TEST_test_store_io_readwrite_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:56:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:701:16:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:602:19:   required from 'void _writeStore(TFragStore&, const std::string&, const char*) [with TFragStore = seqan::FragmentStore<>; std::string = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:624:16:   required from 'void SEQAN_TEST_test_store_io_split_sam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:63:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Ucsc_<UcscKnownIsoforms_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownIsoforms_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Ucsc_<> >; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Ucsc_<> >; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:50:16:   required from 'void SEQAN_TEST_test_store_io_read_ucsc_known_genes() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:43:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:346:15:   required from 'void SEQAN_TEST_test_store_io_read_gff() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:48:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:701:16:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:602:19:   required from 'void _writeStore(TFragStore&, const std::string&, const char*) [with TFragStore = seqan::FragmentStore<>; std::string = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:624:16:   required from 'void SEQAN_TEST_test_store_io_split_sam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:63:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:602:19:   required from 'void _writeStore(TFragStore&, const std::string&, const char*) [with TFragStore = seqan::FragmentStore<>; std::string = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:624:16:   required from 'void SEQAN_TEST_test_store_io_split_sam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:63:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:80:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:698:17:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:701:16:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:602:19:   required from 'void _writeStore(TFragStore&, const std::string&, const char*) [with TFragStore = seqan::FragmentStore<>; std::string = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:624:16:   required from 'void SEQAN_TEST_test_store_io_split_sam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:63:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:602:19:   required from 'void _writeStore(TFragStore&, const std::string&, const char*) [with TFragStore = seqan::FragmentStore<>; std::string = std::__cxx11::basic_string<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:624:16:   required from 'void SEQAN_TEST_test_store_io_split_sam() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:63:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:698:17:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:572:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:698:17:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, SuffixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, SuffixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_io.h:355:10:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const UcscKnownIsoforms&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; UcscKnownIsoforms = Tag<Ucsc_<UcscKnownIsoforms_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_file.h:168:20:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const TagSelector<TSubList>&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TTagList = TagList<Tag<Ucsc_<UcscKnownIsoforms_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_file.h:170:20:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const TagSelector<TSubList>&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_ucsc.h:295:24:   required from 'void seqan::writeRecords(FormattedFile<Tag<Ucsc_<> >, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, const TFormat&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFormat = TagSelector<TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_ucsc.h:303:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Ucsc_<> >, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:334:17:   required from 'void SEQAN_TEST_test_store_io_write_ucsc_known_genes() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:698:17:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:572:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:698:17:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:663:20:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::end(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:811:66:   required from 'void seqan::_fillBamSeqAndQual(TSeq&, TQual&, const TRead&) [with TSeq = String<SimpleType<unsigned char, Iupac_>, Alloc<> >; TQual = String<char, Alloc<> >; TRead = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:31:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:698:17:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:731:16:   required from 'void SEQAN_TEST_test_store_io_write_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:731:16:   required from 'void SEQAN_TEST_test_store_io_write_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:733:16:   required from 'void SEQAN_TEST_test_store_io_write_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, SuffixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_file.h:168:20:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const TagSelector<TSubList>&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TTagList = TagList<Tag<Ucsc_<UcscKnownIsoforms_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_file.h:170:20:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const TagSelector<TSubList>&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_ucsc.h:295:24:   required from 'void seqan::writeRecords(FormattedFile<Tag<Ucsc_<> >, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, const TFormat&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFormat = TagSelector<TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_ucsc.h:303:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Ucsc_<> >, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:334:17:   required from 'void SEQAN_TEST_test_store_io_write_ucsc_known_genes() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:733:16:   required from 'void SEQAN_TEST_test_store_io_write_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:733:16:   required from 'void SEQAN_TEST_test_store_io_write_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:58:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:56:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:357:37:   required from 'typename seqan::Convert<seqan::ModifiedAlphabet<THost, seqan::ModExpand<CHAR, TSpec> >, seqan::Proxy<TSpec2> >::Type seqan::convertImpl(Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, T>, const Proxy<TSpec2>&) [with THost = SimpleType<unsigned char, Dna5Q_>; char CHAR = '-'; TSpec = Tag<Default_>; T = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >; TSpec2 = IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > >; typename Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, Proxy<TSpec2> >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_conversion.h:149:23:   required from 'typename seqan::Convert<TTarget, TSource>::Type seqan::convert(const TSource&) [with TTarget = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >; TSource = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >; typename Convert<TTarget, TSource>::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:92:59:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:698:17:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:17:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:357:37:   required from 'typename seqan::Convert<seqan::ModifiedAlphabet<THost, seqan::ModExpand<CHAR, TSpec> >, seqan::Proxy<TSpec2> >::Type seqan::convertImpl(Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, T>, const Proxy<TSpec2>&) [with THost = SimpleType<unsigned char, Dna5Q_>; char CHAR = '-'; TSpec = Tag<Default_>; T = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >; TSpec2 = IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > >; typename Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, Proxy<TSpec2> >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_conversion.h:149:23:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store_io.h:698:17:   required from 'void SEQAN_TEST_test_store_io_read_amos() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/store/test_store.cpp:57:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long long unsigned int; TSource = std::__cxx11::basic_string<char>]',
    inlined from 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<long long unsigned int, std::__cxx11::basic_string<char>, void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream_lexical_cast.h:233:66:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<long long unsigned int, std::__cxx11::basic_string<char>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long long unsigned int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = std::__cxx11::basic_string<char>]',
    inlined from 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<long unsigned int, std::__cxx11::basic_string<char>, void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream_lexical_cast.h:233:66:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<long unsigned int, std::__cxx11::basic_string<char>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = std::__cxx11::basic_string<char>]',
    inlined from 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<unsigned int, std::__cxx11::basic_string<char>, void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream_lexical_cast.h:233:66:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<unsigned int, std::__cxx11::basic_string<char>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = std::__cxx11::basic_string<char>]',
    inlined from 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<short unsigned int, std::__cxx11::basic_string<char>, void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream_lexical_cast.h:233:66:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<short unsigned int, std::__cxx11::basic_string<char>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long long unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<long long unsigned int, seqan::String<char, seqan::Alloc<> >, void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream_lexical_cast.h:233:66:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<long long unsigned int, seqan::String<char, seqan::Alloc<> >, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<long unsigned int, seqan::String<char, seqan::Alloc<> >, void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream_lexical_cast.h:233:66:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<long unsigned int, seqan::String<char, seqan::Alloc<> >, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<unsigned int, seqan::String<char, seqan::Alloc<> >, void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream_lexical_cast.h:233:66:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<unsigned int, seqan::String<char, seqan::Alloc<> >, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<short unsigned int, seqan::String<char, seqan::Alloc<> >, void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream/test_stream_lexical_cast.h:233:66:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void LexicalCastTest__Exception<SEQAN_TParam>::runTest() [with SEQAN_TParam = seqan::Pair<short unsigned int, seqan::String<char, seqan::Alloc<> >, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = Segment<String<char, Alloc<> >, PrefixSegment>]',
    inlined from 'int seqan::read(FragmentStore<TSpec, TConfig>&, TFile&, Amos) [with TFile = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:273:64:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int seqan::read(FragmentStore<TSpec, TConfig>&, TFile&, Amos) [with TFile = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::PrefixSegment>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = Segment<String<char, Alloc<> >, SuffixSegment>]',
    inlined from 'int seqan::read(FragmentStore<TSpec, TConfig>&, TFile&, Amos) [with TFile = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:274:64:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int seqan::read(FragmentStore<TSpec, TConfig>&, TFile&, Amos) [with TFile = std::basic_fstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 25%] Linking CXX executable ../../bin/test_stream
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/stream && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_stream.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_stream.dir/test_stream.cpp.o -o ../../bin/test_stream  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Built target test_stream
make  -f tests/swift_local/CMakeFiles/test_find_swift.dir/build.make tests/swift_local/CMakeFiles/test_find_swift.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/swift_local /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/swift_local/CMakeFiles/test_find_swift.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/swift_local/CMakeFiles/test_find_swift.dir/build.make tests/swift_local/CMakeFiles/test_find_swift.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Building CXX object tests/swift_local/CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/swift_local && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/swift_local/CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o -MF CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o.d -o CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/../../apps/stellar/stellar.h:30,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/../../apps/stellar/stellar_types.h:155:32: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  155 | struct LessPos : public ::std::binary_function <TMatch, TMatch, bool> {
      |                                ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/../../apps/stellar/stellar_types.h:207:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  207 | struct LessLength : public ::std::binary_function <TMatch, TMatch, bool> {
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp: In instantiation of 'seqan::Align<TString, seqan::Tag<seqan::ArrayGaps_> > testLongestEpsMatch(const TString&, const TString&) [with TString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:219:53:   required from 'void SEQAN_TEST_test_longest_epsMatch() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:321:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:213:12: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
  213 |     return alignment;
      |            ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/../../apps/stellar/stellar.h: In instantiation of 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:246:19:   required from 'void testXDropAlign(const TString&, const TString&, TScore, TScoreValue, TScoreValue, TAliString&) [with TString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TAliString = seqan::String<seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TScoreValue = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:255:19:   required from 'void SEQAN_TEST_test_split_xDrop_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:322:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/../../apps/stellar/stellar.h:194:24: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
  194 |                 TAlign ali(align);
      |                        ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TValue = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TTargetSpec = Alloc<>; TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >&; TSource = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/../../apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:246:19:   required from 'void testXDropAlign(const TString&, const TString&, TScore, TScoreValue, TScoreValue, TAliString&) [with TString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TAliString = seqan::String<seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TScoreValue = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:255:19:   required from 'void SEQAN_TEST_test_split_xDrop_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:322:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >; TSource = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >; TValue2 = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:740:41:   required from 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = Index<String<SimpleType<unsigned char, Dna_>, Alloc<> >, IndexQGram<UngappedShape<4> > >; TSpec = Tag<SwiftLocal_>; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:53:13:   required from 'void testLocalSwift(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<TIndex, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, int, seqan::String<seqan::String<char, seqan::Alloc<> > >&) [with THaystack = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:75:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4> > >& seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4> > >::operator=(const seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TShapeSpec = seqan::UngappedShape<4>; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:740:41:   required from 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, IndexQGram<UngappedShape<4> > >; TSpec = Tag<SwiftLocal_>; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:53:13:   required from 'void testLocalSwift(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<TIndex, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, int, seqan::String<seqan::String<char, seqan::Alloc<> > >&) [with THaystack = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexQGram<seqan::UngappedShape<4> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:108:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexQGram<seqan::UngappedShape<4> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexQGram<seqan::UngappedShape<4> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexQGram<seqan::UngappedShape<4> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::IndexQGram<seqan::UngappedShape<4> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TShapeSpec = seqan::UngappedShape<4>; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TValue = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TTargetSpec = Alloc<>; TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >&; TSource = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/../../apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:246:19:   required from 'void testXDropAlign(const TString&, const TString&, TScore, TScoreValue, TScoreValue, TAliString&) [with TString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TAliString = seqan::String<seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TScoreValue = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:255:19:   required from 'void SEQAN_TEST_test_split_xDrop_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:322:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >*; TParam = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >*; TParam = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TValue = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TTargetSpec = Alloc<>; TValue = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >&; TSource = Align<String<SimpleType<unsigned char, Dna_>, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/../../apps/stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:246:19:   required from 'void testXDropAlign(const TString&, const TString&, TScore, TScoreValue, TScoreValue, TAliString&) [with TString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TAliString = seqan::String<seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TScoreValue = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:255:19:   required from 'void SEQAN_TEST_test_split_xDrop_align() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local/test_find_swift.cpp:322:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
[ 25%] Linking CXX executable ../../bin/test_store
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/store && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_store.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_store.dir/test_store.cpp.o -o ../../bin/test_store  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Built target test_store
make  -f tests/tabix_io/CMakeFiles/test_tabix_io.dir/build.make tests/tabix_io/CMakeFiles/test_tabix_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/tabix_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/tabix_io/CMakeFiles/test_tabix_io.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/tabix_io/CMakeFiles/test_tabix_io.dir/build.make tests/tabix_io/CMakeFiles/test_tabix_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 25%] Building CXX object tests/tabix_io/CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/tabix_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/tabix_io/CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o -MF CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o.d -o CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io/test_tabix_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io/test_tabix_io.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io/test_tabix_io.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io/test_tabix_io.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io/test_tabix_io.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io/test_tabix_io.h:51:22:   required from 'void SEQAN_TEST_test_tabix_io_read_indexed_vcf() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io/test_tabix_io.cpp:43:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io/test_tabix_io.h:51:22:   required from 'void SEQAN_TEST_test_tabix_io_read_indexed_vcf() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io/test_tabix_io.cpp:43:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::_readTabixRecord(TabixRecord_&, CharString&, TIter&, const TabixIndex&) [with TIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/tabix_io/tabix_index_tbi.h:216:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::_readTabixRecord(TabixRecord_&, CharString&, TIter&, const TabixIndex&) [with TIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(VcfRecord&, VcfIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Vcf&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io/read_vcf.h:192:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(VcfRecord&, VcfIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Vcf&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 26%] Linking CXX executable ../../bin/test_tabix_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/tabix_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_tabix_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o -o ../../bin/test_tabix_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 26%] Built target test_tabix_io
make  -f tests/translation/CMakeFiles/test_translation.dir/build.make tests/translation/CMakeFiles/test_translation.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/translation /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/translation/CMakeFiles/test_translation.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/translation/CMakeFiles/test_translation.dir/build.make tests/translation/CMakeFiles/test_translation.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 26%] Building CXX object tests/translation/CMakeFiles/test_translation.dir/test_translation.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/translation && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/translation/CMakeFiles/test_translation.dir/test_translation.cpp.o -MF CMakeFiles/test_translation.dir/test_translation.cpp.o.d -o CMakeFiles/test_translation.dir/test_translation.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp
[ 26%] Linking CXX executable ../../bin/test_find_swift
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/swift_local && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_find_swift.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o -o ../../bin/test_find_swift  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 26%] Built target test_find_swift
make  -f tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/build.make tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/ucsc_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/build.make tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 26%] Building CXX object tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/ucsc_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o -MF CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o.d -o CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Ucsc_<UcscKnownGene_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Ucsc_<> >; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Ucsc_<> >; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:181:16:   required from 'void SEQAN_TEST_test_ucsc_io_ucsc_file_in_read_record_ucsc_known_genes() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:307:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, SuffixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = String<char, Alloc<> >; TContainer = Segment<const String<char, Alloc<> >, SuffixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_io.h:355:10:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const UcscKnownIsoforms&) [with TTarget = String<char, Alloc<> >; UcscKnownIsoforms = Tag<Ucsc_<UcscKnownIsoforms_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:169:20:   required from 'void SEQAN_TEST_test_ucsc_io_write_record_ucsc_known_isoforms() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:304:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Ucsc_<UcscKnownIsoforms_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownIsoforms_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Ucsc_<> >; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Ucsc_<> >; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:181:16:   required from 'void SEQAN_TEST_test_ucsc_io_ucsc_file_in_read_record_ucsc_known_genes() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:307:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Ucsc_<UcscKnownGene_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Ucsc_<> >; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Ucsc_<> >; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:181:16:   required from 'void SEQAN_TEST_test_ucsc_io_ucsc_file_in_read_record_ucsc_known_genes() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:307:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, SuffixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = String<char, Alloc<> >; TContainer = Segment<const String<char, Alloc<> >, SuffixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_io.h:355:10:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const UcscKnownIsoforms&) [with TTarget = String<char, Alloc<> >; UcscKnownIsoforms = Tag<Ucsc_<UcscKnownIsoforms_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:169:20:   required from 'void SEQAN_TEST_test_ucsc_io_write_record_ucsc_known_isoforms() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:304:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:290:37:   required from 'void seqan::_translateImplLoop(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, unsigned int, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<6>&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TSpec3 = Dependent<Tag<TagInsist_> >; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:331:31:   required from 'void seqan::_translateImplLoopOMPWrapper(TTarget&, const TSource&, const GeneticCode<CODE_SPEC>&, const Frames_<frames>&, const Serial&) [with TSource = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; unsigned char frames = 6; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; Serial = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:361:33:   required from 'void seqan::_translateImpl(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TSpec3 = Dependent<Tag<TagInsist_> >; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 6]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:428:19:   required from 'void seqan::_translateInputWrap(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, const TInString&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 6]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:538:35:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const GeneticCode<CODE_SPEC>&, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; TSource = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:589:21:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; TSource = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:420:18:   required from 'void test_translation_onestring_multiframe_impl() [with TTargetSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:460:64:   required from 'void SEQAN_TEST_test_translation_onestring_multiframe_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:290:37:   required from 'void seqan::_translateImplLoop(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, unsigned int, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<6>&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TSpec3 = Owner<>; TInString = String<SimpleType<unsigned char, Rna5_>, Alloc<> >; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:331:31:   required from 'void seqan::_translateImplLoopOMPWrapper(TTarget&, const TSource&, const GeneticCode<CODE_SPEC>&, const Frames_<frames>&, const Serial&) [with TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<> >; TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; unsigned char frames = 6; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; Serial = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:361:33:   required from 'void seqan::_translateImpl(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TSpec3 = Owner<>; TInString = String<SimpleType<unsigned char, Rna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 6]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:412:19:   required from 'void seqan::_translateInputWrap(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TSpec3 = Owner<>; TInString = String<SimpleType<unsigned char, Rna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 6]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:538:35:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const GeneticCode<CODE_SPEC>&, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:589:21:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<> >; TParallelism = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:493:18:   required from 'void test_translation_stringset_multiframe_impl(const TResultSet&, const TSourceSet&, const TParallelism&) [with TSourceSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Owner<> >; TResultSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:601:51:   required from 'void test_translation_stringset_multiframe_impl0() [with TSetSpec = seqan::Owner<>; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:644:66:   required from 'void SEQAN_TEST_test_translation_stringset_multiframe_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:48:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:249:37:   required from 'void seqan::_translateImplLoop(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, unsigned int, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<2>&) [with TSpec1 = Alloc<>; TSpec2 = Owner<ConcatDirect<> >; TSpec3 = Owner<ConcatDirect<> >; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:331:31:   required from 'void seqan::_translateImplLoopOMPWrapper(TTarget&, const TSource&, const GeneticCode<CODE_SPEC>&, const Frames_<frames>&, const Serial&) [with TSource = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; unsigned char frames = 2; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; Serial = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:393:33:   required from 'void seqan::_translateImpl(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, Owner<ConcatDirect<> > >&, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec3 = Owner<ConcatDirect<> >; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 2]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:412:19:   required from 'void seqan::_translateInputWrap(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec2 = Owner<ConcatDirect<> >; TSpec3 = Owner<ConcatDirect<> >; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 2]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:532:35:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const GeneticCode<CODE_SPEC>&, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; TSource = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:589:21:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; TSource = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TParallelism = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:493:18:   required from 'void test_translation_stringset_multiframe_impl(const TResultSet&, const TSourceSet&, const TParallelism&) [with TSourceSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TResultSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:583:51:   required from 'void test_translation_stringset_multiframe_impl0() [with TSetSpec = seqan::Owner<seqan::ConcatDirect<> >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:650:79:   required from 'void SEQAN_TEST_test_translation_stringset_multiframe_concatdirect_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, AminoAcid_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:947:29:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:499:13:   required from 'void test_translation_stringset_multiframe_impl(const TResultSet&, const TSourceSet&, const TParallelism&) [with TSourceSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TResultSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:583:51:   required from 'void test_translation_stringset_multiframe_impl0() [with TSetSpec = seqan::Owner<seqan::ConcatDirect<> >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:650:79:   required from 'void SEQAN_TEST_test_translation_stringset_multiframe_concatdirect_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:249:37:   required from 'void seqan::_translateImplLoop(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, unsigned int, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<2>&) [with TSpec1 = Alloc<>; TSpec2 = Owner<ConcatDirect<> >; TSpec3 = Owner<ConcatDirect<> >; TInString = String<SimpleType<unsigned char, Rna5_>, Alloc<> >; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:331:31:   required from 'void seqan::_translateImplLoopOMPWrapper(TTarget&, const TSource&, const GeneticCode<CODE_SPEC>&, const Frames_<frames>&, const Serial&) [with TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; unsigned char frames = 2; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; Serial = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:393:33:   required from 'void seqan::_translateImpl(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, Owner<ConcatDirect<> > >&, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec3 = Owner<ConcatDirect<> >; TInString = String<SimpleType<unsigned char, Rna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 2]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:412:19:   required from 'void seqan::_translateInputWrap(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec2 = Owner<ConcatDirect<> >; TSpec3 = Owner<ConcatDirect<> >; TInString = String<SimpleType<unsigned char, Rna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 2]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:532:35:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const GeneticCode<CODE_SPEC>&, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:589:21:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TParallelism = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:493:18:   required from 'void test_translation_stringset_multiframe_impl(const TResultSet&, const TSourceSet&, const TParallelism&) [with TSourceSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TResultSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:601:51:   required from 'void test_translation_stringset_multiframe_impl0() [with TSetSpec = seqan::Owner<seqan::ConcatDirect<> >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:650:79:   required from 'void SEQAN_TEST_test_translation_stringset_multiframe_concatdirect_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:290:37:   required from 'void seqan::_translateImplLoop(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, unsigned int, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<6>&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TSpec3 = Dependent<Tag<TagInsist_> >; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:331:31:   required from 'void seqan::_translateImplLoopOMPWrapper(TTarget&, const TSource&, const GeneticCode<CODE_SPEC>&, const Frames_<frames>&, const Serial&) [with TSource = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; unsigned char frames = 6; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; Serial = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:361:33:   required from 'void seqan::_translateImpl(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TSpec3 = Dependent<Tag<TagInsist_> >; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 6]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:428:19:   required from 'void seqan::_translateInputWrap(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, const TInString&, const GeneticCode<CODE_SPEC>&, const Frames_<n>&, const TParallelism&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; unsigned char n = 6]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:538:35:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const GeneticCode<CODE_SPEC>&, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; TSource = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:589:21:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; TSource = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TParallelism = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:420:18:   required from 'void test_translation_onestring_multiframe_impl() [with TTargetSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:460:64:   required from 'void SEQAN_TEST_test_translation_onestring_multiframe_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:46:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Rna5_>, Alloc<> >; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Rna5_>, Alloc<> >, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:290:37:   required from 'void seqan::_translateImplLoop(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, unsigned int, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<6>&) [with TSpec1 = Alloc<>; TSpec2 = Owner<>; TSpec3 = Owner<>; TInString = String<SimpleType<unsigned char, Rna5_>, Alloc<> >; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:331:31:   required from 'void seqan::_translateImplLoopOMPWrapper(TTarget&, const TSource&, const GeneticCode<CODE_SPEC>&, const Frames_<frames>&, const Serial&) [with TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<> >; TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; unsigned char frames = 6; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; Serial = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:361:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:538:35:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const GeneticCode<CODE_SPEC>&, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<> >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:589:21:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> > >; TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<> >; TParallelism = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:493:18:   required from 'void test_translation_stringset_multiframe_impl(const TResultSet&, const TSourceSet&, const TParallelism&) [with TSourceSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Owner<> >; TResultSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:601:51:   required from 'void test_translation_stringset_multiframe_impl0() [with TSetSpec = seqan::Owner<>; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:644:66:   required from 'void SEQAN_TEST_test_translation_stringset_multiframe_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:48:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:249:37:   required from 'void seqan::_translateImplLoop(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, unsigned int, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<2>&) [with TSpec1 = Alloc<>; TSpec2 = Owner<ConcatDirect<> >; TSpec3 = Owner<ConcatDirect<> >; TInString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:331:31:   required from 'void seqan::_translateImplLoopOMPWrapper(TTarget&, const TSource&, const GeneticCode<CODE_SPEC>&, const Frames_<frames>&, const Serial&) [with TSource = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; unsigned char frames = 2; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; Serial = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:393:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:532:35:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const GeneticCode<CODE_SPEC>&, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; TSource = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:589:21:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; TSource = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TParallelism = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:493:18:   required from 'void test_translation_stringset_multiframe_impl(const TResultSet&, const TSourceSet&, const TParallelism&) [with TSourceSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TResultSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:583:51:   required from 'void test_translation_stringset_multiframe_impl0() [with TSetSpec = seqan::Owner<seqan::ConcatDirect<> >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:650:79:   required from 'void SEQAN_TEST_test_translation_stringset_multiframe_concatdirect_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:947:29:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*, const char*, ...) [with T1 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:998:21:   required from 'bool seqan::ClassTest::testEqual(const char*, int, const T1&, const char*, const T2&, const char*) [with T1 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; T2 = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:499:13:   required from 'void test_translation_stringset_multiframe_impl(const TResultSet&, const TSourceSet&, const TParallelism&) [with TSourceSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TResultSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:583:51:   required from 'void test_translation_stringset_multiframe_impl0() [with TSetSpec = seqan::Owner<seqan::ConcatDirect<> >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:650:79:   required from 'void SEQAN_TEST_test_translation_stringset_multiframe_concatdirect_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Rna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Rna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Rna5_> > > >; typename seqan::RemoveReference<THost_>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:249:37:   required from 'void seqan::_translateImplLoop(StringSet<String<SimpleType<unsigned char, AminoAcid_>, TSpec1>, TSpec2>&, unsigned int, const StringSet<TInString, TSpec3>&, const GeneticCode<CODE_SPEC>&, const Frames_<2>&) [with TSpec1 = Alloc<>; TSpec2 = Owner<ConcatDirect<> >; TSpec3 = Owner<ConcatDirect<> >; TInString = String<SimpleType<unsigned char, Rna5_>, Alloc<> >; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:331:31:   required from 'void seqan::_translateImplLoopOMPWrapper(TTarget&, const TSource&, const GeneticCode<CODE_SPEC>&, const Frames_<frames>&, const Serial&) [with TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; unsigned char frames = 2; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL; Serial = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:393:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:532:35:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const GeneticCode<CODE_SPEC>&, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TParallelism = Tag<Serial_>; GeneticCodeSpec CODE_SPEC = seqan::CANONICAL]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/translation/translation.h:589:21:   required from 'void seqan::translate(TTarget&, const TSource&, TranslationFrames, const TParallelism&) [with TTarget = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Owner<ConcatDirect<> > >; TSource = StringSet<String<SimpleType<unsigned char, Rna5_>, Alloc<> >, Owner<ConcatDirect<> > >; TParallelism = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:493:18:   required from 'void test_translation_stringset_multiframe_impl(const TResultSet&, const TSourceSet&, const TParallelism&) [with TSourceSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TResultSet = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:601:51:   required from 'void test_translation_stringset_multiframe_impl0() [with TSetSpec = seqan::Owner<seqan::ConcatDirect<> >; TParallelism = seqan::Tag<seqan::Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.h:650:79:   required from 'void SEQAN_TEST_test_translation_stringset_multiframe_concatdirect_serial() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation/test_translation.cpp:49:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Rna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'void seqan::lexicalCastWithException(TTarget&, const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(UcscRecord&, UcscIOContext&, TForwardIter&, const UcscKnownGene&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_io.h:292:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:282:9: warning: 'exons' may be used uninitialized [-Wmaybe-uninitialized]
  282 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(UcscRecord&, UcscIOContext&, TForwardIter&, const UcscKnownGene&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io/test_ucsc_io.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_io.h:289:14: note: 'exons' declared here
  289 |     unsigned exons;
      |              ^~~~~
In function 'void seqan::lexicalCastWithException(TTarget&, const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(UcscRecord&, UcscIOContext&, TForwardIter&, const UcscKnownGene&) [with TForwardIter = Iter<String<char, MMap<> >, AdaptorIterator<char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_io.h:292:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:282:9: warning: 'exons' may be used uninitialized [-Wmaybe-uninitialized]
  282 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(UcscRecord&, UcscIOContext&, TForwardIter&, const UcscKnownGene&) [with TForwardIter = Iter<String<char, MMap<> >, AdaptorIterator<char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_io.h:289:14: note: 'exons' declared here
  289 |     unsigned exons;
      |              ^~~~~
[ 26%] Linking CXX executable ../../bin/test_ucsc_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/ucsc_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_ucsc_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o -o ../../bin/test_ucsc_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 26%] Built target test_ucsc_io
make  -f tests/vcf_io/CMakeFiles/test_vcf_io.dir/build.make tests/vcf_io/CMakeFiles/test_vcf_io.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/vcf_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/vcf_io/CMakeFiles/test_vcf_io.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/vcf_io/CMakeFiles/test_vcf_io.dir/build.make tests/vcf_io/CMakeFiles/test_vcf_io.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 26%] Building CXX object tests/vcf_io/CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/vcf_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT tests/vcf_io/CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o -MF CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o.d -o CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.h:198:22:   required from 'void SEQAN_TEST_test_vcf_io_vcf_file_read_record() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.h:198:22:   required from 'void SEQAN_TEST_test_vcf_io_vcf_file_read_record() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]'
/build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.cpp:45:5:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 26%] Linking CXX executable ../../bin/test_translation
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/translation && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_translation.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_translation.dir/test_translation.cpp.o -o ../../bin/test_translation  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 26%] Built target test_translation
make  -f demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/build.make demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/build.make demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 26%] Building CXX object demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o -MF CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o.d -o CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/blast/blast_in_lowlevel.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(VcfRecord&, VcfIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Vcf&) [with TForwardIter = Iter<std::basic_ifstream<char>, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Owner<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io/read_vcf.h:192:43,
    inlined from 'void SEQAN_TEST_test_vcf_io_write_vcf_record() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' at /build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io/test_vcf_io.h:369:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void SEQAN_TEST_test_vcf_io_write_vcf_record() [with bool speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/blast/blast_in_lowlevel.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/blast/blast_in_lowlevel.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(VcfRecord&, VcfIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Vcf&) [with TForwardIter = Iter<String<char, MMap<> >, AdaptorIterator<char*, Tag<Default_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Owner<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io/read_vcf.h:192:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(VcfRecord&, VcfIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Vcf&) [with TForwardIter = Iter<String<char, MMap<> >, AdaptorIterator<char*, Tag<Default_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Owner<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 27%] Linking CXX executable ../bin/demo_blast_blast_in_lowlevel
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_blast_blast_in_lowlevel.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o -o ../bin/demo_blast_blast_in_lowlevel  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Built target demo_blast_blast_in_lowlevel
make  -f demos/CMakeFiles/demo_dox_align_align.dir/build.make demos/CMakeFiles/demo_dox_align_align.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_align.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_align.dir/build.make demos/CMakeFiles/demo_dox_align_align.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o -MF CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o.d -o CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/align.cpp
[ 27%] Linking CXX executable ../../bin/test_vcf_io
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/vcf_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_vcf_io.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o -o ../../bin/test_vcf_io  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Built target test_vcf_io
make  -f demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/build.make demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/align.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/align.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/build.make demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/build
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o -MF CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o.d -o CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/compute_alignment_stats.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/align.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/compute_alignment_stats.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/compute_alignment_stats.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 27%] Linking CXX executable ../bin/demo_dox_align_align
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_align.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o -o ../bin/demo_dox_align_align  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Built target demo_dox_align_align
make  -f demos/CMakeFiles/demo_dox_align_gaps_example.dir/build.make demos/CMakeFiles/demo_dox_align_gaps_example.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_gaps_example.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_gaps_example.dir/build.make demos/CMakeFiles/demo_dox_align_gaps_example.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o -MF CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o.d -o CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/gaps_example.cpp
[ 27%] Linking CXX executable ../bin/demo_dox_align_compute_alignment_stats
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_compute_alignment_stats.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o -o ../bin/demo_dox_align_compute_alignment_stats  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Built target demo_dox_align_compute_alignment_stats
make  -f demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o -MF CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o.d -o CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_banded.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/gaps_example.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_banded.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_banded.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 27%] Linking CXX executable ../bin/demo_dox_align_gaps_example
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_gaps_example.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o -o ../bin/demo_dox_align_gaps_example  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Built target demo_dox_align_gaps_example
make  -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o -MF CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o.d -o CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_unbanded.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_unbanded.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_unbanded.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 27%] Linking CXX executable ../bin/demo_dox_align_global_alignment_banded
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_global_alignment_banded.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o -o ../bin/demo_dox_align_global_alignment_banded  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Built target demo_dox_align_global_alignment_banded
make  -f demos/CMakeFiles/demo_dox_align_integrate_align.dir/build.make demos/CMakeFiles/demo_dox_align_integrate_align.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_integrate_align.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_integrate_align.dir/build.make demos/CMakeFiles/demo_dox_align_integrate_align.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o -MF CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o.d -o CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp
[ 29%] Linking CXX executable ../bin/demo_dox_align_global_alignment_unbanded
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o -o ../bin/demo_dox_align_global_alignment_unbanded  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Built target demo_dox_align_global_alignment_unbanded
make  -f demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Building CXX object demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o -MF CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o.d -o CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:269:34:   required from 'void seqan::_reinitArrayGaps(Gaps<TSequence, Tag<ArrayGaps_> >&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:408:21:   required from 'void seqan::setSource(Gaps<TSequence, Tag<ArrayGaps_> >&, TSequence&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp:45:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:230:27:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp:48:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:230:27:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp:48:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:230:27:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp:48:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, AminoAcid_>; TSeqVValue = SimpleType<unsigned char, AminoAcid_>; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; TScoringScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<>, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, AminoAcid_>; TSeqVValue = SimpleType<unsigned char, AminoAcid_>; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; TScoringScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<>, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:230:27:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp:48:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:230:27:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&) [with TSequence = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp:48:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:621:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:38:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h: In instantiation of 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<AffineGaps_> >, unsigned char, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:434:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:621:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:38:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  294 |         ModifiedString<TInf0, ModReverse> const r_inf0(inf0);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:295:49: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  295 |         ModifiedString<TInf1, ModReverse> const r_inf1(inf1);
      |                                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:44:69:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:294:49:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:621:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:38:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<char, Alloc<> >, InfixSegment>*; TParam = const Segment<const String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<const String<char, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<const String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<const String<char, Alloc<> >, InfixSegment>; TValue2 = Segment<const String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<const String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<const String<char, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<const String<char, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:427:10:   required from 'void seqan::assignSource(Gaps<TSequence, Tag<ArrayGaps_> >&, const TSequence2&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TSequence2 = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:25:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:230:27:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:27:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:190:33:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, const TAlgoTag&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:218:31:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = false; bool LEFT = false; bool RIGHT = false; bool BOTTOM = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_unbanded.h:230:27:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&) [with TSequence = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:27:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, Terminator_<XDrop_<int> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<XDrop_<int> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Terminator_<XDrop_<int> > >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<XDrop_<int> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Terminator_<XDrop_<int> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<XDrop_<int> >; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:203:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const True&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TString1 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsRight_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:297:42:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:621:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:38:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, Terminator_<XDrop_<int> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<XDrop_<int> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Terminator_<XDrop_<int> > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<XDrop_<int> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Terminator_<XDrop_<int> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<XDrop_<int> >; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:203:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const True&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = Segment<const String<char, Alloc<> >, InfixSegment>; TString1 = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:351:43:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:621:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:38:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; TIterator = const char*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, Terminator_<XDrop_<int> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<XDrop_<int> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Terminator_<XDrop_<int> > >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<XDrop_<int> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Terminator_<XDrop_<int> >; TSequenceH = Segment<const String<char, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<XDrop_<int> >; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:203:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const True&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = Segment<const String<char, Alloc<> >, InfixSegment>; TString1 = Segment<const String<char, Alloc<> >, InfixSegment>; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:351:43:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:621:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:38:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:397:81:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, Terminator_<XDrop_<int> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSeqHValue = char; TSeqVValue = char; TSeqVIterator = ModifiedIterator<Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPFinalColumn_>, Tag<PartialColumnTop_> >; TDPProfile = DPProfile_<AlignExtend_<XDrop_<int> >, Tag<LinearGaps_>, TracebackOn<>, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:891:38:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, Terminator_<XDrop_<int> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<XDrop_<int> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Terminator_<XDrop_<int> > >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<XDrop_<int> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Terminator_<XDrop_<int> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<XDrop_<int> >; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:203:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const True&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TString1 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsRight_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:297:42:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:621:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:38:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<const String<char, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, Terminator_<XDrop_<int> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<XDrop_<int> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Terminator_<XDrop_<int> > >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<XDrop_<int> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Terminator_<XDrop_<int> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<XDrop_<int> >; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:203:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const True&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TString1 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsRight_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:297:42:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:621:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:38:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<const String<char, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, Terminator_<XDrop_<int> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<> >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = AlignExtend_<XDrop_<int> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Terminator_<XDrop_<int> > >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = AlignExtend_<XDrop_<int> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<>; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Terminator_<XDrop_<int> >; TSequenceH = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSequenceV = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = AlignExtend_<XDrop_<int> >; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<False, False, True, True>; TTraceConfig = TracebackOn<>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:203:33:   required from 'TScoreValue seqan::_setUpAndRunAlignImpl(TAliExtContext_&, const TString0&, const TString1&, const Score<TScoreValue, TScoreSpec>&, int, int, TScoreValue, const TTracebackConfig&, const True&, const True&) [with TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >; TString0 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TString1 = ModifiedString<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TScoreValue = int; TScoreSpec = Tag<Simple_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsRight_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:297:42:   required from 'TScoreValue seqan::_extendAlignmentImpl(Gaps<TSource0, TGapsSpec0>&, Gaps<TSource1, TGapsSpec1>&, const TScoreValue&, const TString0&, const TString1&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TSource0 = Segment<const String<char, Alloc<> >, InfixSegment>; TSource1 = Segment<const String<char, Alloc<> >, InfixSegment>; TGapsSpec0 = Tag<ArrayGaps_>; TGapsSpec1 = Tag<ArrayGaps_>; TString0 = String<char, Alloc<> >; TString1 = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:395:32:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&, TAliExtContext_&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True; TAliExtContext_ = AliExtContext_<Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, Gaps<Segment<const String<char, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >, DPContext<DPCell_<int, Tag<LinearGaps_> >, unsigned char, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >, String<unsigned char> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:424:36:   required from 'TScoreValue seqan::_extendAlignmentImpl(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&, const TBoolBanded&, const TBoolXDrop&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>; TBoolBanded = True; TBoolXDrop = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_extend/align_extend.h:621:32:   required from 'TScoreValue seqan::extendAlignment(Align<TSource, TSpec>&, const TScoreValue&, const TString&, const TString&, const Tuple<TPos, 4>&, const ExtensionDirection&, int, int, const TScoreValue&, const Score<TScoreValue2, TScoreSpec>&) [with TStringInfix = Segment<const String<char, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TString = String<char, Alloc<> >; TPos = unsigned int; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp:38:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
[ 29%] Linking CXX executable ../bin/demo_dox_align_integrate_align
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_integrate_align.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o -o ../bin/demo_dox_align_integrate_align  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Built target demo_dox_align_integrate_align
make  -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Building CXX object demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o -MF CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o.d -o CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_profile/profile_seq_frac_score.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_profile/profile_seq_frac_score.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_profile/profile_seq_frac_score.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 29%] Linking CXX executable ../bin/demo_dox_align_extend_extend_alignment
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_extend_extend_alignment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o -o ../bin/demo_dox_align_extend_extend_alignment  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Built target demo_dox_align_extend_extend_alignment
make  -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Building CXX object demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o -MF CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o.d -o CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_profile/profile_seq_score.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_profile/profile_seq_score.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_profile/profile_seq_score.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align_profile.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 29%] Linking CXX executable ../bin/demo_dox_align_profile_profile_seq_frac_score
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o -o ../bin/demo_dox_align_profile_profile_seq_frac_score  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Built target demo_dox_align_profile_profile_seq_frac_score
make  -f demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Building CXX object demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o -MF CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o.d -o CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_split/split_alignment.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_split/split_alignment.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 29%] Linking CXX executable ../bin/demo_dox_align_profile_profile_seq_score
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o -o ../bin/demo_dox_align_profile_profile_seq_score  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Built target demo_dox_align_profile_profile_seq_score
make  -f demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/build.make demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/build.make demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Building CXX object demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o -MF CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o.d -o CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/arg_parse/argument_parser.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/arg_parse/argument_parser.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/arg_parse/argument_parser.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 29%] Linking CXX executable ../bin/demo_dox_align_split_split_alignment
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_split_split_alignment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o -o ../bin/demo_dox_align_split_split_alignment  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Built target demo_dox_align_split_split_alignment
make  -f demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Building CXX object demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o -MF CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o.d -o CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_file_in.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_file_in.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_file_in.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_file_in.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 29%] Linking CXX executable ../bin/demo_dox_bam_io_bam_file_in
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_bam_io_bam_file_in.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o -o ../bin/demo_dox_bam_io_bam_file_in  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Built target demo_dox_bam_io_bam_file_in
make  -f demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Building CXX object demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o -MF CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o.d -o CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_tags_dict.cpp
[ 30%] Linking CXX executable ../bin/demo_dox_arg_parse_argument_parser
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_arg_parse_argument_parser.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o -o ../bin/demo_dox_arg_parse_argument_parser  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Built target demo_dox_arg_parse_argument_parser
make  -f demos/CMakeFiles/demo_dox_basic_enable_if.dir/build.make demos/CMakeFiles/demo_dox_basic_enable_if.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_enable_if.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_enable_if.dir/build.make demos/CMakeFiles/demo_dox_basic_enable_if.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Building CXX object demos/CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o -MF CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o.d -o CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/enable_if.cpp
[ 30%] Linking CXX executable ../bin/demo_dox_basic_enable_if
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_enable_if.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o -o ../bin/demo_dox_basic_enable_if  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Built target demo_dox_basic_enable_if
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Building CXX object demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o -MF CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o.d -o CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/metaprogramming_control.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_tags_dict.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_tags_dict.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_tags_dict.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 30%] Linking CXX executable ../bin/demo_dox_basic_metaprogramming_control
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_metaprogramming_control.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o -o ../bin/demo_dox_basic_metaprogramming_control  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Built target demo_dox_basic_metaprogramming_control
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Building CXX object demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o -MF CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o.d -o CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/metaprogramming_logic.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_tags_dict.cpp:15:40:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_tags_dict.cpp:15:40:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 30%] Linking CXX executable ../bin/demo_dox_basic_metaprogramming_logic
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o -o ../bin/demo_dox_basic_metaprogramming_logic  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Built target demo_dox_basic_metaprogramming_logic
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Building CXX object demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o -MF CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o.d -o CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/metaprogramming_math.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 30%] Linking CXX executable ../bin/demo_dox_basic_metaprogramming_math
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_metaprogramming_math.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o -o ../bin/demo_dox_basic_metaprogramming_math  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Built target demo_dox_basic_metaprogramming_math
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Building CXX object demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o -MF CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o.d -o CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/metaprogramming_switch.cpp
[ 30%] Linking CXX executable ../bin/demo_dox_basic_metaprogramming_switch
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o -o ../bin/demo_dox_basic_metaprogramming_switch  -lrt -lz -lbz2
[ 30%] Linking CXX executable ../bin/demo_dox_bam_io_bam_tags_dict
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o -o ../bin/demo_dox_bam_io_bam_tags_dict  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Built target demo_dox_basic_metaprogramming_switch
make  -f demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build.make demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build.make demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Building CXX object demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o -MF CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o.d -o CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/simple_type_construction.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Built target demo_dox_bam_io_bam_tags_dict
make  -f demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/build.make demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/build.make demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Building CXX object demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o -MF CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o.d -o CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/zip_iterator.cpp
[ 31%] Linking CXX executable ../bin/demo_dox_basic_simple_type_construction
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_simple_type_construction.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o -o ../bin/demo_dox_basic_simple_type_construction  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Built target demo_dox_basic_simple_type_construction
make  -f demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build.make demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build.make demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Building CXX object demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o -MF CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o.d -o CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bed_io/UNUSED_bed_stream_read.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/zip_iterator.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/zip_iterator.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 31%] Linking CXX executable ../bin/demo_dox_basic_zip_iterator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_zip_iterator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o -o ../bin/demo_dox_basic_zip_iterator  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Built target demo_dox_basic_zip_iterator
make  -f demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/build.make demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/build.make demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Building CXX object demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o -MF CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o.d -o CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bed_io/UNUSED_bed_stream_read.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bed_io/UNUSED_bed_stream_read.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bed_io/UNUSED_bed_stream_read.cpp:21:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bed_io/UNUSED_bed_stream_read.cpp:21:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:113:43,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed3_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed3_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'int main(int, const char**)' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bed_io/UNUSED_bed_stream_read.cpp:30:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main(int, const char**)':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:119:41,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed3_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed3_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'int main(int, const char**)' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bed_io/UNUSED_bed_stream_read.cpp:30:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main(int, const char**)':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 31%] Linking CXX executable ../bin/demo_dox_bed_io_UNUSED_bed_stream_read
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o -o ../bin/demo_dox_bed_io_UNUSED_bed_stream_read  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Built target demo_dox_bed_io_UNUSED_bed_stream_read
make  -f demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/build.make demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/build.make demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Building CXX object demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o -MF CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o.d -o CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_aho_corasick.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:41:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:41:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:41:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:41:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:41:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h: In instantiation of 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:404:32: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  404 |             for (TReadGapsIter itR2 = itR; itR2 != itREnd; ++itR2)
      |                                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:223:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:370:17:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:969:48:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Standard_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:395:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:932:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:941:46:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:136:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, FractionalScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; FractionalScore = const Tag<FractionalScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:272:24:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, const TScore&, ReScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; TScore = Score<int, Tag<Simple_> >; ReScore = const Tag<ReScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:384:24:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:295:23:   required from 'bool seqan::alignmentGraphToFragmentStore(TFragmentStore&, const Graph<Alignment<StringSet<TSequence, TSetSpec>, TCargo, TSpec> >&, const Graph<Undirected<double> >&, const String<unsigned int, Alloc<> >&, const String<unsigned int, Alloc<> >&, unsigned int, bool) [with TFragmentStore = FragmentStore<>; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TCargo = unsigned int; TSetSpec = Dependent<Tag<TagInsist_> >; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:427:34:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:280:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = unsigned int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:930:19:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::_endContig(unsigned int) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:697:5:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_aho_corasick.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/refwrap.h:39,
                 from /usr/include/c++/13/deque:67,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:56:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:513:15:   required from 'void seqan::insertGap(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >; TPosition = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1610:30:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_updateAlignments(unsigned int, unsigned int&, TProfileString&, seqan::Gaps<seqan::String<seqan::ProfileChar<typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type> > >&, seqan::Gaps<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>&, seqan::ExtractProfileInfo_&, const seqan::WindowClippingInfo_&, const TAlignedReadIter&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5_>; typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5Q_>; typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; typename TFragmentStore::TReadSeqStore = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TAlignedReadIter = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1321:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TValue2 = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Pigeonhole<>; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:463:41:   required from 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:370:17:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:17:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:382:27:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp:46:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 31%] Linking CXX executable ../bin/demo_dox_find_finder_aho_corasick
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_find_finder_aho_corasick.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o -o ../bin/demo_dox_find_finder_aho_corasick  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Built target demo_dox_find_finder_aho_corasick
make  -f demos/CMakeFiles/demo_dox_find_finder_index.dir/build.make demos/CMakeFiles/demo_dox_find_finder_index.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_index.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_find_finder_index.dir/build.make demos/CMakeFiles/demo_dox_find_finder_index.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Building CXX object demos/CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o -MF CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o.d -o CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/refwrap.h:39,
                 from /usr/include/c++/13/deque:67,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:220:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:277:34: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  277 |             hostIterator(finder) = finder.range.i1;
      |             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h: In instantiation of 'void seqan::clear(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:15:10:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:35: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:178:21: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  178 |         me.range.i1 = me.range.i2 = TIterator();
      |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:171:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h: In instantiation of 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:414:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  414 |         finder.range.i1 = saIt + rng.i1;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:415:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  415 |         finder.range.i2 = saIt + rng.i2;
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:419:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  419 |         finder.range.i1 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:420:25: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  420 |         finder.range.i2 = saIt;
      |         ~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = const seqan::CompressedSA<seqan::String<char, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<char, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::EmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:407:59:   required from 'void seqan::_findFirstIndex(Finder<Index<TText, FMIndex<TSpec, TConfig> >, TSpecFinder>&, const TPattern&, FinderSTree) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]; FinderSTree = const Tag<FinderSTree_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TSpecFinder = const Tag<FinderSTree_>; TPattern = char [2]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 31%] Linking CXX executable ../bin/demo_dox_find_finder_index
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_find_finder_index.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o -o ../bin/demo_dox_find_finder_index  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Built target demo_dox_find_finder_index
make  -f demos/CMakeFiles/demo_dox_find_finder_online.dir/build.make demos/CMakeFiles/demo_dox_find_finder_online.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_online.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_find_finder_online.dir/build.make demos/CMakeFiles/demo_dox_find_finder_online.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Building CXX object demos/CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o -MF CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o.d -o CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_online.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_online.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/refwrap.h:39,
                 from /usr/include/c++/13/deque:67,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 32%] Linking CXX executable ../bin/demo_dox_find_finder_online
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_find_finder_online.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o -o ../bin/demo_dox_find_finder_online  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Built target demo_dox_find_finder_online
make  -f demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/build.make demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/build.make demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Building CXX object demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o -MF CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o.d -o CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/gff_io/UNUSED_gff_stream_read.cpp
[ 32%] Linking CXX executable ../bin/demo_dox_consensus_consensus_alignment
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_consensus_consensus_alignment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o -o ../bin/demo_dox_consensus_consensus_alignment  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Built target demo_dox_consensus_consensus_alignment
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/all_pairs_shortest_path.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/gff_io/UNUSED_gff_stream_read.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/gff_io/UNUSED_gff_stream_read.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/gff_io/UNUSED_gff_stream_read.cpp:20:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/gff_io/UNUSED_gff_stream_read.cpp:20:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/gff_io/UNUSED_gff_stream_read.cpp:20:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/all_pairs_shortest_path.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/all_pairs_shortest_path.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:379:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:386:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_all_pairs_shortest_path
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o -o ../bin/demo_dox_graph_algorithms_all_pairs_shortest_path  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Built target demo_dox_graph_algorithms_all_pairs_shortest_path
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/bellman_ford_algorithm.cpp
[ 32%] Linking CXX executable ../bin/demo_dox_gff_io_UNUSED_gff_stream_read
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o -o ../bin/demo_dox_gff_io_UNUSED_gff_stream_read  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Built target demo_dox_gff_io_UNUSED_gff_stream_read
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/breadth_first_search.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/bellman_ford_algorithm.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/bellman_ford_algorithm.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/breadth_first_search.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/breadth_first_search.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_bellman_ford_algorithm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_bellman_ford_algorithm  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Built target demo_dox_graph_algorithms_bellman_ford_algorithm
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dag_shortest_path.cpp
[ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_breadth_first_search
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o -o ../bin/demo_dox_graph_algorithms_breadth_first_search  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Built target demo_dox_graph_algorithms_breadth_first_search
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/depth_first_search.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dag_shortest_path.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dag_shortest_path.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/depth_first_search.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/depth_first_search.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_dag_shortest_path
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o -o ../bin/demo_dox_graph_algorithms_dag_shortest_path  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Built target demo_dox_graph_algorithms_dag_shortest_path
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dijkstra.cpp
[ 33%] Linking CXX executable ../bin/demo_dox_graph_algorithms_depth_first_search
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o -o ../bin/demo_dox_graph_algorithms_depth_first_search  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Built target demo_dox_graph_algorithms_depth_first_search
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/floyd_warshall_algorithm.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dijkstra.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dijkstra.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/floyd_warshall_algorithm.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/floyd_warshall_algorithm.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 33%] Linking CXX executable ../bin/demo_dox_graph_algorithms_floyd_warshall_algorithm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_floyd_warshall_algorithm  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Built target demo_dox_graph_algorithms_floyd_warshall_algorithm
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/ford_fulkerson_algorithm.cpp
[ 33%] Linking CXX executable ../bin/demo_dox_graph_algorithms_dijkstra
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o -o ../bin/demo_dox_graph_algorithms_dijkstra  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Built target demo_dox_graph_algorithms_dijkstra
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/heaviest_increasing_subsequence.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/ford_fulkerson_algorithm.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/ford_fulkerson_algorithm.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/heaviest_increasing_subsequence.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/heaviest_increasing_subsequence.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 33%] Linking CXX executable ../bin/demo_dox_graph_algorithms_heaviest_increasing_subsequence
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o -o ../bin/demo_dox_graph_algorithms_heaviest_increasing_subsequence  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Built target demo_dox_graph_algorithms_heaviest_increasing_subsequence
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/kruskals_algorithm.cpp
[ 33%] Linking CXX executable ../bin/demo_dox_graph_algorithms_ford_fulkerson_algorithm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_ford_fulkerson_algorithm  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Built target demo_dox_graph_algorithms_ford_fulkerson_algorithm
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/longest_common_subsequence.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/kruskals_algorithm.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/kruskals_algorithm.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/longest_common_subsequence.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/longest_common_subsequence.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 33%] Linking CXX executable ../bin/demo_dox_graph_algorithms_kruskals_algorithm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_kruskals_algorithm  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Built target demo_dox_graph_algorithms_kruskals_algorithm
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/longest_increasing_subsequence.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/longest_increasing_subsequence.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/longest_increasing_subsequence.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_longest_increasing_subsequence
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o -o ../bin/demo_dox_graph_algorithms_longest_increasing_subsequence  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Built target demo_dox_graph_algorithms_longest_increasing_subsequence
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/prims_algorithm.cpp
[ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_longest_common_subsequence
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o -o ../bin/demo_dox_graph_algorithms_longest_common_subsequence  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Built target demo_dox_graph_algorithms_longest_common_subsequence
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/strongly_connected_components.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/prims_algorithm.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/prims_algorithm.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/strongly_connected_components.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/strongly_connected_components.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_prims_algorithm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_prims_algorithm  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Built target demo_dox_graph_algorithms_prims_algorithm
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/topological_sort.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/topological_sort.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/topological_sort.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_strongly_connected_components
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o -o ../bin/demo_dox_graph_algorithms_strongly_connected_components  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Built target demo_dox_graph_algorithms_strongly_connected_components
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/transitive_closure.cpp
[ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_topological_sort
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o -o ../bin/demo_dox_graph_algorithms_topological_sort  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Built target demo_dox_graph_algorithms_topological_sort
make  -f demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build.make demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build.make demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Building CXX object demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o -MF CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o.d -o CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_align/graph_align.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/transitive_closure.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/transitive_closure.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_transitive_closure
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o -o ../bin/demo_dox_graph_algorithms_transitive_closure  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_align/graph_align.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_align/graph_align.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Built target demo_dox_graph_algorithms_transitive_closure
make  -f demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Building CXX object demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o -MF CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o.d -o CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_types/graph_algo_dijkstra.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_align/graph_align.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_types/graph_algo_dijkstra.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_types/graph_algo_dijkstra.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 35%] Linking CXX executable ../bin/demo_dox_graph_types_graph_algo_dijkstra
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o -o ../bin/demo_dox_graph_types_graph_algo_dijkstra  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_graph_types_graph_algo_dijkstra
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Building CXX object demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o -MF CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o.d -o CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/UNUSED_shape.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/UNUSED_shape.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/UNUSED_shape.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 35%] Linking CXX executable ../bin/demo_dox_graph_align_graph_align
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_align_graph_align.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o -o ../bin/demo_dox_graph_align_graph_align  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_graph_align_graph_align
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Building CXX object demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o -MF CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o.d -o CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/UNUSED_shape_hash.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/UNUSED_shape_hash.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/UNUSED_shape_hash.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 35%] Linking CXX executable ../bin/demo_dox_index_UNUSED_shape
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_UNUSED_shape.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o -o ../bin/demo_dox_index_UNUSED_shape  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_index_UNUSED_shape
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Building CXX object demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o -MF CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o.d -o CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/UNUSED_shape_hash_next.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/UNUSED_shape_hash_next.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/UNUSED_shape_hash_next.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 35%] Linking CXX executable ../bin/demo_dox_index_UNUSED_shape_hash
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o -o ../bin/demo_dox_index_UNUSED_shape_hash  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_index_UNUSED_shape_hash
make  -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Building CXX object demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o -MF CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o.d -o CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 35%] Linking CXX executable ../bin/demo_dox_index_UNUSED_shape_hash_next
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o -o ../bin/demo_dox_index_UNUSED_shape_hash_next  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_index_UNUSED_shape_hash_next
make  -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Building CXX object demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o -MF CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o.d -o CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative_bottomUp.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative_bottomUp.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'const seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >& seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::operator=(const seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec2> > >&) [with TSpec2 = seqan::ParentLinks<>; TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:366:29:   required from 'const seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >& seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::operator=(const seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:11:55:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:244:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
  244 |             vDesc = value(_origin);
      |             ~~~~~~^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:245:25: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
  245 |             _parentDesc = nodeUp(_origin);
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'const seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >& seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::operator=(const seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec2> > >&) [with TSpec2 = seqan::ParentLinks<seqan::Postorder>; TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:366:29:   required from 'const seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >& seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::operator=(const seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:22:66:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:244:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
  244 |             vDesc = value(_origin);
      |             ~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:245:25: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
  245 |             _parentDesc = nodeUp(_origin);
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDown(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = ParentLinks<Postorder>; TDfsOrder = Postorder_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = ParentLinks<Postorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1537:26:   required from 'typename seqan::Iterator<seqan::Index<TObject, TSpec>, TSpec>::Type seqan::begin(Index<TObject, TSpec>&, TSpec) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<ParentLinks<Postorder> >; typename Iterator<Index<TObject, TSpec>, TSpec>::Type = Iter<Index<String<char, Alloc<> > >, VSTree<TopDown<ParentLinks<Postorder> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:22:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1838:27: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1838 |             oldParentDesc = nodeUp(it);
      |             ~~~~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1534:66:   required from 'typename seqan::Iterator<seqan::Index<TObject, TSpec>, TSpec>::Type seqan::begin(Index<TObject, TSpec>&, TSpec) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<ParentLinks<> >; typename Iterator<Index<TObject, TSpec>, TSpec>::Type = Iter<Index<String<char, Alloc<> > >, VSTree<TopDown<ParentLinks<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:11:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:15:46:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDown(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = ParentLinks<>; TDfsOrder = Preorder_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = ParentLinks<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2256:24:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:16:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1838:27: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1838 |             oldParentDesc = nodeUp(it);
      |             ~~~~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:16:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<Postorder> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2310:26:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Postorder_, THideEmptyEdges>) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Postorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<Postorder> >; TTraits = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:27:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1534:66:   required from 'typename seqan::Iterator<seqan::Index<TObject, TSpec>, TSpec>::Type seqan::begin(Index<TObject, TSpec>&, TSpec) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<ParentLinks<> >; typename Iterator<Index<TObject, TSpec>, TSpec>::Type = Iter<Index<String<char, Alloc<> > >, VSTree<TopDown<ParentLinks<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:11:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp:15:46:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'const seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >& seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::operator=(const seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Postorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative_bottomUp.cpp:11:51:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:473:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
  473 |             vDesc = _origin.vDesc;
      |             ~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1547:79:   required from 'typename seqan::Iterator<seqan::Index<TObject, TSpec>, seqan::BottomUp<TSpec> >::Type seqan::begin(Index<TObject, TSpec>&, BottomUp<TSpec>) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = Postorder; typename Iterator<Index<TObject, TSpec>, BottomUp<TSpec> >::Type = Iter<Index<String<char, Alloc<> > >, VSTree<BottomUp<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative_bottomUp.cpp:11:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative_bottomUp.cpp:15:46:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative_bottomUp.cpp:15:46:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 35%] Linking CXX executable ../bin/demo_dox_index_begin_atEnd_representative
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o -o ../bin/demo_dox_index_begin_atEnd_representative  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_index_begin_atEnd_representative
make  -f demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build.make demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build.make demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Building CXX object demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o -MF CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o.d -o CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_range_goDown_representative_repLength.cpp
[ 35%] Linking CXX executable ../bin/demo_dox_index_begin_atEnd_representative_bottomUp
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o -o ../bin/demo_dox_index_begin_atEnd_representative_bottomUp  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_index_begin_atEnd_representative_bottomUp
make  -f demos/CMakeFiles/demo_dox_index_counting.dir/build.make demos/CMakeFiles/demo_dox_index_counting.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_counting.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_counting.dir/build.make demos/CMakeFiles/demo_dox_index_counting.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Building CXX object demos/CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o -MF CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o.d -o CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_range_goDown_representative_repLength.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_range_goDown_representative_repLength.cpp:18:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_range_goDown_representative_repLength.cpp:18:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TValue = char]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1928:27:   required from 'bool seqan::_goDownString(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TString = char [5]; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_range_goDown_representative_repLength.cpp:12:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1898:23: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1898 |             value(it) = nodeDesc;
      |             ~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1897:25:   required from 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TValue = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1928:27:   required from 'bool seqan::_goDownString(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TString = char [5]; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_range_goDown_representative_repLength.cpp:12:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1751:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1751 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_range_goDown_representative_repLength.cpp:13:52:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_range_goDown_representative_repLength.cpp:13:52:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 36%] Linking CXX executable ../bin/demo_dox_index_begin_range_goDown_representative_repLength
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o -o ../bin/demo_dox_index_begin_range_goDown_representative_repLength  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Built target demo_dox_index_begin_range_goDown_representative_repLength
make  -f demos/CMakeFiles/demo_dox_index_find_repeats.dir/build.make demos/CMakeFiles/demo_dox_index_find_repeats.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_find_repeats.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_find_repeats.dir/build.make demos/CMakeFiles/demo_dox_index_find_repeats.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o -MF CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o.d -o CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/find_repeats.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp:19:92:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp:19:92:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp:30:72:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<String<char, Alloc<> > >; TSpec = PreorderEmptyEdges; THideEmptyEdges = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >; TTraits = PreorderEmptyEdges]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<PreorderEmptyEdges> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:277:11:   required from 'seqan::Iter<TContainer, TSpec> seqan::operator++(Iter<TContainer, TSpec>&, int) [with TContainer = Index<String<char, Alloc<> > >; TSpec = VSTree<TopDown<ParentLinks<PreorderEmptyEdges> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp:36:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp:30:72:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/find_repeats.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/find_repeats.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 36%] Linking CXX executable ../bin/demo_dox_index_counting
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_counting.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o -o ../bin/demo_dox_index_counting  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Built target demo_dox_index_counting
make  -f demos/CMakeFiles/demo_dox_index_finder.dir/build.make demos/CMakeFiles/demo_dox_index_finder.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_finder.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_finder.dir/build.make demos/CMakeFiles/demo_dox_index_finder.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o -MF CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o.d -o CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/finder.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/find_repeats.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/finder.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/find_repeats.cpp:17:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/find_repeats.cpp:17:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/find_repeats.cpp:17:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/find_repeats.cpp:17:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/find_repeats.cpp:17:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> > >; TSource = Index<String<char, Alloc<> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> > >; TValue2 = Index<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<char, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<char, Alloc<> > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<char, Alloc<> > >&; typename Haystack<TFinder>::Type = Index<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:59:46:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/finder.cpp:14:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> > >& seqan::Index<seqan::String<char, seqan::Alloc<> > >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> > >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::String<char, seqan::Alloc<> >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
[ 36%] Linking CXX executable ../bin/demo_dox_index_finder
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_finder.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o -o ../bin/demo_dox_index_finder  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Built target demo_dox_index_finder
make  -f demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build.make demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build.make demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o -MF CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o.d -o CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TValue = char]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1928:27:   required from 'bool seqan::_goDownString(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TString = char [4]; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TObject = char [4]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TObject = char [4]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:18:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1898:23: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1898 |             value(it) = nodeDesc;
      |             ~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1897:25:   required from 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TValue = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1928:27:   required from 'bool seqan::_goDownString(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TString = char [4]; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TObject = char [4]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TObject = char [4]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:18:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1751:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1751 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
[ 36%] Linking CXX executable ../bin/demo_dox_index_find_repeats
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_find_repeats.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o -o ../bin/demo_dox_index_find_repeats  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Built target demo_dox_index_find_repeats
make  -f demos/CMakeFiles/demo_dox_index_iterator.dir/build.make demos/CMakeFiles/demo_dox_index_iterator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_iterator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_iterator.dir/build.make demos/CMakeFiles/demo_dox_index_iterator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o -MF CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o.d -o CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp:16:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDown(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = ParentLinks<>; TDfsOrder = Preorder_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = ParentLinks<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator.cpp:17:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1838:27: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1838 |             oldParentDesc = nodeUp(it);
      |             ~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator.cpp:10:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator.cpp:10:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator.cpp:15:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator.cpp:15:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 36%] Linking CXX executable ../bin/demo_dox_index_iterator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_iterator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o -o ../bin/demo_dox_index_iterator  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Built target demo_dox_index_iterator
make  -f demos/CMakeFiles/demo_dox_index_iterator_short.dir/build.make demos/CMakeFiles/demo_dox_index_iterator_short.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_iterator_short.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_iterator_short.dir/build.make demos/CMakeFiles/demo_dox_index_iterator_short.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o -MF CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o.d -o CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDown(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = ParentLinks<Postorder>; TDfsOrder = Postorder_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = ParentLinks<Postorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1586:26:   required from 'void seqan::goBegin(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp:16:12:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1838:27: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1838 |             oldParentDesc = nodeUp(it);
      |             ~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp:14:71:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<Postorder> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1583:15:   required from 'void seqan::goBegin(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp:16:12:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp:14:71:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp:19:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp:19:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 37%] Linking CXX executable ../bin/demo_dox_index_iterator_short
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_iterator_short.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o -o ../bin/demo_dox_index_iterator_short  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_iterator_short
make  -f demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build.make demos/CMakeFiles/demo_dox_index_length_countSequences.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_length_countSequences.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build.make demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o -MF CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o.d -o CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<char, Alloc<> > > >; TSource = Index<StringSet<String<char, Alloc<> > > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<char, Alloc<> > > >; TValue2 = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<char, Alloc<> > > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<char, Alloc<> > > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<StringSet<String<char, Alloc<> > > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<StringSet<String<char, Alloc<> > > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<StringSet<String<char, Alloc<> > > >&; typename Haystack<TFinder>::Type = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:59:46:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp:22:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 37%] Linking CXX executable ../bin/demo_dox_index_getOccurrences_getFrequency_range_getFibre
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o -o ../bin/demo_dox_index_getOccurrences_getFrequency_range_getFibre  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_getOccurrences_getFrequency_range_getFibre
make  -f demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_maxrepeats.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_maxrepeats.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o -MF CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o.d -o CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/maxrepeats.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/maxrepeats.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/maxrepeats.cpp:3:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/maxrepeats.cpp:33:63:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/maxrepeats.cpp:33:63:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 37%] Linking CXX executable ../bin/demo_dox_index_maxrepeats
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_maxrepeats.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o -o ../bin/demo_dox_index_maxrepeats  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_maxrepeats
make  -f demos/CMakeFiles/demo_dox_index_mummy.dir/build.make demos/CMakeFiles/demo_dox_index_mummy.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_mummy.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_mummy.dir/build.make demos/CMakeFiles/demo_dox_index_mummy.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o -MF CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o.d -o CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 37%] Linking CXX executable ../bin/demo_dox_index_length_countSequences
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_length_countSequences.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o -o ../bin/demo_dox_index_length_countSequences  -lrt -lz -lbz2
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:59:22:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_length_countSequences
make  -f demos/CMakeFiles/demo_dox_index_mums.dir/build.make demos/CMakeFiles/demo_dox_index_mums.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_mums.dir/DependInfo.cmake "--color="
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:59:22:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_mums.dir/build.make demos/CMakeFiles/demo_dox_index_mums.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o -MF CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o.d -o CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:59:22:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >, IndexEsa<> >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >, IndexEsa<> >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexEsa<> >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexEsa<> >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:151:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:59:22:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:59:22:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TString = String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, External<ExternalConfigLarge<> > >; TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::External<seqan::ExternalConfigLarge<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:12:43:   required from 'void findMUMs(TIndex&, unsigned int) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:72:13:   required from 'int runMummy(int, const char**, unsigned int, unsigned int) [with TSpec = seqan::External<seqan::ExternalConfigLarge<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp:149:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:39:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:39:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mums.cpp:21:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:132:
In member function 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >::operator=(seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >&&)',
    inlined from 'seqan::BufferHandler<seqan::Pipe<TInput, TSpec>, seqan::Tag<seqan::ExtStringSourceCachingSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pipe<TInput, TSpec>, seqan::Tag<seqan::ExtStringSourceCachingSpec_> >::first() [with TSequence = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >; TSpec = seqan::Source<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:317:51,
    inlined from 'void seqan::_lcpProcessMulti(TTextInput&, const TLimitsString&, TInvertedSAInput&, TDest&, LcpConfig) [with TTextInput = Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TInvertedSAInput = Pool<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, MapperSpec<MapperConfigSize<_mapInverseMulti<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, String<long unsigned int, External<ExternalConfigLarge<> > >, long unsigned int>, long unsigned int, File<Async<> > > > >; TDest = Pool<Pair<long unsigned int, long unsigned int>, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int>, long unsigned int>, long unsigned int, File<Async<> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_lcp_core.h:253:63:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/iter_concat_virtual.h:87:7: warning: '<anonymous>.seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >::host' may be used uninitialized [-Wmaybe-uninitialized]
   87 | class Iter<TStringSet, ConcatVirtual<TSpec> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:67:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h: In function 'void seqan::_lcpProcessMulti(TTextInput&, const TLimitsString&, TInvertedSAInput&, TDest&, LcpConfig) [with TTextInput = Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TInvertedSAInput = Pool<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, MapperSpec<MapperConfigSize<_mapInverseMulti<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, String<long unsigned int, External<ExternalConfigLarge<> > >, long unsigned int>, long unsigned int, File<Async<> > > > >; TDest = Pool<Pair<long unsigned int, long unsigned int>, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int>, long unsigned int>, long unsigned int, File<Async<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:317:53: note: '<anonymous>' declared here
  317 |             if (!(rest -= length(buffer))) source = ISource();
      |                                                     ^~~~~~~~~
In member function 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >::operator=(seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >&&)',
    inlined from 'seqan::BufferHandler<seqan::Pipe<TInput, TSpec>, seqan::Tag<seqan::ExtStringSourceCachingSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pipe<TInput, TSpec>, seqan::Tag<seqan::ExtStringSourceCachingSpec_> >::first() [with TSequence = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >; TSpec = seqan::Source<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:317:51,
    inlined from 'void seqan::_lcpProcessMulti(TTextInput&, const TLimitsString&, TInvertedSAInput&, TDest&, LcpConfig) [with TTextInput = Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TInvertedSAInput = Pool<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, MapperSpec<MapperConfigSize<_mapInverseMulti<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, String<long unsigned int, External<ExternalConfigLarge<> > >, long unsigned int>, long unsigned int, File<Async<> > > > >; TDest = Pool<Pair<long unsigned int, long unsigned int>, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int>, long unsigned int>, long unsigned int, File<Async<> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_lcp_core.h:253:63:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/iter_concat_virtual.h:87:7: warning: '<anonymous>.seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >::objNo' may be used uninitialized [-Wmaybe-uninitialized]
   87 | class Iter<TStringSet, ConcatVirtual<TSpec> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h: In function 'void seqan::_lcpProcessMulti(TTextInput&, const TLimitsString&, TInvertedSAInput&, TDest&, LcpConfig) [with TTextInput = Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TInvertedSAInput = Pool<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, MapperSpec<MapperConfigSize<_mapInverseMulti<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, String<long unsigned int, External<ExternalConfigLarge<> > >, long unsigned int>, long unsigned int, File<Async<> > > > >; TDest = Pool<Pair<long unsigned int, long unsigned int>, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int>, long unsigned int>, long unsigned int, File<Async<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:317:53: note: '<anonymous>' declared here
  317 |             if (!(rest -= length(buffer))) source = ISource();
      |                                                     ^~~~~~~~~
In member function 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >::operator=(seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >&&)',
    inlined from 'seqan::BufferHandler<seqan::Pipe<TInput, TSpec>, seqan::Tag<seqan::ExtStringSourceCachingSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pipe<TInput, TSpec>, seqan::Tag<seqan::ExtStringSourceCachingSpec_> >::next() [with TSequence = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >; TSpec = seqan::Source<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:328:51,
    inlined from 'void seqan::_lcpProcessMulti(TTextInput&, const TLimitsString&, TInvertedSAInput&, TDest&, LcpConfig) [with TTextInput = Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TInvertedSAInput = Pool<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, MapperSpec<MapperConfigSize<_mapInverseMulti<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, String<long unsigned int, External<ExternalConfigLarge<> > >, long unsigned int>, long unsigned int, File<Async<> > > > >; TDest = Pool<Pair<long unsigned int, long unsigned int>, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int>, long unsigned int>, long unsigned int, File<Async<> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_lcp_core.h:346:33:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/iter_concat_virtual.h:87:7: warning: '<anonymous>.seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >::host' may be used uninitialized [-Wmaybe-uninitialized]
   87 | class Iter<TStringSet, ConcatVirtual<TSpec> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h: In function 'void seqan::_lcpProcessMulti(TTextInput&, const TLimitsString&, TInvertedSAInput&, TDest&, LcpConfig) [with TTextInput = Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TInvertedSAInput = Pool<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, MapperSpec<MapperConfigSize<_mapInverseMulti<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, String<long unsigned int, External<ExternalConfigLarge<> > >, long unsigned int>, long unsigned int, File<Async<> > > > >; TDest = Pool<Pair<long unsigned int, long unsigned int>, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int>, long unsigned int>, long unsigned int, File<Async<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:328:53: note: '<anonymous>' declared here
  328 |             if (!(rest -= length(buffer))) source = ISource();
      |                                                     ^~~~~~~~~
In member function 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >::operator=(seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >&&)',
    inlined from 'seqan::BufferHandler<seqan::Pipe<TInput, TSpec>, seqan::Tag<seqan::ExtStringSourceCachingSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pipe<TInput, TSpec>, seqan::Tag<seqan::ExtStringSourceCachingSpec_> >::next() [with TSequence = seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> > >; TSpec = seqan::Source<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:328:51,
    inlined from 'void seqan::_lcpProcessMulti(TTextInput&, const TLimitsString&, TInvertedSAInput&, TDest&, LcpConfig) [with TTextInput = Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TInvertedSAInput = Pool<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, MapperSpec<MapperConfigSize<_mapInverseMulti<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, String<long unsigned int, External<ExternalConfigLarge<> > >, long unsigned int>, long unsigned int, File<Async<> > > > >; TDest = Pool<Pair<long unsigned int, long unsigned int>, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int>, long unsigned int>, long unsigned int, File<Async<> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_lcp_core.h:346:33:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/iter_concat_virtual.h:87:7: warning: '<anonymous>.seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Owner<> >, seqan::ConcatVirtual<> >::objNo' may be used uninitialized [-Wmaybe-uninitialized]
   87 | class Iter<TStringSet, ConcatVirtual<TSpec> >
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h: In function 'void seqan::_lcpProcessMulti(TTextInput&, const TLimitsString&, TInvertedSAInput&, TDest&, LcpConfig) [with TTextInput = Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, External<ExternalConfigLarge<> > >, Owner<> > >, Source<> >; TLimitsString = String<long unsigned int, External<ExternalConfigLarge<> > >; TInvertedSAInput = Pool<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, MapperSpec<MapperConfigSize<_mapInverseMulti<Pair<long unsigned int, Tuple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, 2, void>, void>, String<long unsigned int, External<ExternalConfigLarge<> > >, long unsigned int>, long unsigned int, File<Async<> > > > >; TDest = Pool<Pair<long unsigned int, long unsigned int>, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int>, long unsigned int>, long unsigned int, File<Async<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_source.h:328:53: note: '<anonymous>' declared here
  328 |             if (!(rest -= length(buffer))) source = ISource();
      |                                                     ^~~~~~~~~
[ 37%] Linking CXX executable ../bin/demo_dox_index_mums
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_mums.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o -o ../bin/demo_dox_index_mums  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_mums
make  -f demos/CMakeFiles/demo_dox_index_node_predicate.dir/build.make demos/CMakeFiles/demo_dox_index_node_predicate.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_node_predicate.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_node_predicate.dir/build.make demos/CMakeFiles/demo_dox_index_node_predicate.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o -MF CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o.d -o CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/node_predicate.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/node_predicate.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/node_predicate.cpp:3:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/node_predicate.cpp:90:68:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/node_predicate.cpp:90:68:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 37%] Linking CXX executable ../bin/demo_dox_index_node_predicate
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_node_predicate.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o -o ../bin/demo_dox_index_node_predicate  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_node_predicate
make  -f demos/CMakeFiles/demo_dox_index_open_save.dir/build.make demos/CMakeFiles/demo_dox_index_open_save.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_open_save.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_open_save.dir/build.make demos/CMakeFiles/demo_dox_index_open_save.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o -MF CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o.d -o CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 37%] Linking CXX executable ../bin/demo_dox_index_mummy
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_mummy.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o -o ../bin/demo_dox_index_mummy  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_mummy
make  -f demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build.make demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build.make demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Building CXX object demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o -MF CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o.d -o CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/shape_hash_init.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:109:21:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp:17:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/shape_hash_init.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/shape_hash_init.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 38%] Linking CXX executable ../bin/demo_dox_index_shape_hash_init
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_shape_hash_init.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o -o ../bin/demo_dox_index_shape_hash_init  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Built target demo_dox_index_shape_hash_init
make  -f demos/CMakeFiles/demo_dox_index_sufarray.dir/build.make demos/CMakeFiles/demo_dox_index_sufarray.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_sufarray.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_sufarray.dir/build.make demos/CMakeFiles/demo_dox_index_sufarray.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Building CXX object demos/CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o -MF CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o.d -o CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/sufarray.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/sufarray.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/sufarray.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 38%] Linking CXX executable ../bin/demo_dox_index_sufarray
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_sufarray.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o -o ../bin/demo_dox_index_sufarray  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Built target demo_dox_index_sufarray
make  -f demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Building CXX object demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o -MF CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o.d -o CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/supermaxrepeats.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/supermaxrepeats.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/supermaxrepeats.cpp:3:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs.h:121:33:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::SuperMaxRepeats> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/supermaxrepeats.cpp:19:74:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/supermaxrepeats.cpp:34:63:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/supermaxrepeats.cpp:34:63:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 38%] Linking CXX executable ../bin/demo_dox_index_supermaxrepeats
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_supermaxrepeats.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o -o ../bin/demo_dox_index_supermaxrepeats  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Built target demo_dox_index_supermaxrepeats
make  -f demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build.make demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build.make demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Building CXX object demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o -MF CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o.d -o CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/textAt_indexText_saAt_indexRequire.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/textAt_indexText_saAt_indexRequire.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 38%] Linking CXX executable ../bin/demo_dox_index_open_save
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_open_save.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o -o ../bin/demo_dox_index_open_save  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Built target demo_dox_index_open_save
make  -f demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build.make demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build.make demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 38%] Building CXX object demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o -MF CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o.d -o CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/enumerate_strings.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/enumerate_strings.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/enumerate_strings.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 38%] Linking CXX executable ../bin/demo_dox_index_textAt_indexText_saAt_indexRequire
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o -o ../bin/demo_dox_index_textAt_indexText_saAt_indexRequire  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Built target demo_dox_index_textAt_indexText_saAt_indexRequire
make  -f demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build.make demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/DependInfo.cmake "--color="
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make  -f demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build.make demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Building CXX object demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o -MF CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o.d -o CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/get_terminal_size.cpp
[ 38%] Linking CXX executable ../bin/demo_dox_misc_get_terminal_size
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_misc_get_terminal_size.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o -o ../bin/demo_dox_misc_get_terminal_size  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Built target demo_dox_misc_get_terminal_size
make  -f demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build.make demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build.make demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Linking CXX executable ../bin/demo_dox_misc_enumerate_strings
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_misc_enumerate_strings.dir/link.txt --verbose=1
[ 39%] Building CXX object demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o -MF CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o.d -o CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/interval_tree_example.cpp
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o -o ../bin/demo_dox_misc_enumerate_strings  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build.make demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build.make demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Building CXX object demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o -MF CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o.d -o CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/name_store_cache.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/interval_tree_example.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/interval_tree_example.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TCargo>&, const Graph<TSpec>&, const TPropertyMap&, TVertexDescriptor&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, String<char, Alloc<> > >, StorePointsOnly>, Alloc<> >; TVertexDescriptor = unsigned int; TValue = int; TCargo = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1532:18:   required from 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, String<char, Alloc<> > >, StorePointsOnly>, Alloc<> >; TValue = int; TCargo = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1513:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2, TValue2) [with TValue = int; TCargo = String<char, Alloc<> >; TValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/interval_tree_example.cpp:22:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1562:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1562 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1575:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1575 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1598:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1598 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
[ 39%] Linking CXX executable ../bin/demo_dox_misc_name_store_cache
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_misc_name_store_cache.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o -o ../bin/demo_dox_misc_name_store_cache  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Built target demo_dox_misc_name_store_cache
make  -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Building CXX object demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o -MF CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o.d -o CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/functional:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:42:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:427:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::end(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:689:15:   required from 'typename seqan::Size<seqan::ModifiedString<THost, seqan::ModCyclicShape<TSpec> > >::Type seqan::length(const ModifiedString<THost, ModCyclicShape<TSpec> >&) [with THost = String<char, Alloc<> >; TSpec = CyclicShape<GappedShape<Tag<Default_> > >; typename Size<ModifiedString<THost, ModCyclicShape<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape.cpp:28:63:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:371:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<char, Alloc<> >; TSpec = ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape.cpp:27:35:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
[ 39%] Linking CXX executable ../bin/demo_dox_misc_interval_tree_example
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_misc_interval_tree_example.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o -o ../bin/demo_dox_misc_interval_tree_example  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Built target demo_dox_misc_interval_tree_example
make  -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Building CXX object demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o -MF CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o.d -o CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape_snippets.cpp
[ 39%] Linking CXX executable ../bin/demo_dox_modifier_cyclic_shape
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_cyclic_shape.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o -o ../bin/demo_dox_modifier_cyclic_shape  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Built target demo_dox_modifier_cyclic_shape
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Building CXX object demos/CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o -MF CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o.d -o CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape_snippets.cpp:9:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape_snippets.cpp:8:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:386:15:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape_snippets.cpp:58:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:371:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1>; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<char, Alloc<> >; TSpec = ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape_snippets.cpp:32:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'constexpr seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 1, 3, 2> >, 1> >& seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 1, 3, 2> >, 1> >::operator=(const seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 1, 3, 2> >, 1> >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:288:5: note: because 'seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 1, 3, 2> >, 1> >' has user-provided 'seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >::CyclicShape(const seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >&) [with unsigned int LeftOffset = 2; unsigned int RightOffset = 1; int P00 = 1; int P01 = 1; int P02 = 3; int P03 = 2; int P04 = 0; int P05 = 0; int P06 = 0; int P07 = 0; int P08 = 0; int P09 = 0; int P10 = 0; int P11 = 0; int P12 = 0; int P13 = 0; int P14 = 0; int P15 = 0; int P16 = 0; int P17 = 0; int P18 = 0; int P19 = 0]'
  288 |     CyclicShape(CyclicShape const &)
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:427:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::end(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1>; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:689:15:   required from 'typename seqan::Size<seqan::ModifiedString<THost, seqan::ModCyclicShape<TSpec> > >::Type seqan::length(const ModifiedString<THost, ModCyclicShape<TSpec> >&) [with THost = String<char, Alloc<> >; TSpec = CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> >; typename Size<ModifiedString<THost, ModCyclicShape<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1086:31:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<char, Alloc<> >; TSpec = ModCyclicShape<CyclicShape<FixedShape<2, GappedShape<HardwiredShape<1, 1, 3, 2> >, 1> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape_snippets.cpp:32:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'constexpr seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 1, 3, 2> >, 1> >& seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 1, 3, 2> >, 1> >::operator=(const seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 1, 3, 2> >, 1> >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:288:5: note: because 'seqan::CyclicShape<seqan::FixedShape<2, seqan::GappedShape<seqan::HardwiredShape<1, 1, 3, 2> >, 1> >' has user-provided 'seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >::CyclicShape(const seqan::CyclicShape<seqan::FixedShape<LeftOffset, seqan::GappedShape<seqan::HardwiredShape<P00, P01, P02, P03, P04, P05, P06, P07, P08, P09, P10, P11, P12, P13, P14, P15, P16, P17, P18, P19> >, RightOffset> >&) [with unsigned int LeftOffset = 2; unsigned int RightOffset = 1; int P00 = 1; int P01 = 1; int P02 = 3; int P03 = 2; int P04 = 0; int P05 = 0; int P06 = 0; int P07 = 0; int P08 = 0; int P09 = 0; int P10 = 0; int P11 = 0; int P12 = 0; int P13 = 0; int P14 = 0; int P15 = 0; int P16 = 0; int P17 = 0; int P18 = 0; int P19 = 0]'
  288 |     CyclicShape(CyclicShape const &)
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:371:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::begin(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Rooted_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = ModifiedIterator<Iter<String<char, Alloc<> >, AdaptorIterator<char*, Tag<Default_> > >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<char, Alloc<> >; TSpec = ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape_snippets.cpp:51:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'void seqan::_copyCargoImpl(TDest&, TSource&, True) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:458:19:   required from 'void seqan::_copyCargo(TDest&, TSource&) [with TDest = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; TSource = const ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:427:15:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::ModCyclicShape<seqan::CyclicShape<TSpec> > >, const seqan::Tag<TExpand> >::Type seqan::end(const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >&, Tag<TExpand>) [with THost = String<char, Alloc<> >; TSpec = GappedShape<Tag<Default_> >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, ModCyclicShape<CyclicShape<TSpec> > >, const Tag<TExpand> >::Type = ModifiedIterator<const char*, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_cyclic_shape.h:689:15:   required from 'typename seqan::Size<seqan::ModifiedString<THost, seqan::ModCyclicShape<TSpec> > >::Type seqan::length(const ModifiedString<THost, ModCyclicShape<TSpec> >&) [with THost = String<char, Alloc<> >; TSpec = CyclicShape<GappedShape<Tag<Default_> > >; typename Size<ModifiedString<THost, ModCyclicShape<TSpec> > >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1086:31:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = ModifiedString<String<char, Alloc<> >, ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > > >; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:801:10:   required from 'TStream& seqan::operator<<(TStream&, const ModifiedString<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<char, Alloc<> >; TSpec = ModCyclicShape<CyclicShape<GappedShape<Tag<Default_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape_snippets.cpp:51:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:452:15: warning: implicitly-declared 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  452 |     cargo(me) = cargo(_origin);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:203:5: note: because 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >::CyclicShape(const seqan::CyclicShape<seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)'
  203 |     CyclicShape(CyclicShape const & other) :
      |     ^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 39%] Linking CXX executable ../bin/demo_dox_modifier_cyclic_shape_snippets
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o -o ../bin/demo_dox_modifier_cyclic_shape_snippets  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Built target demo_dox_modifier_cyclic_shape_snippets
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Building CXX object demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o -MF CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o.d -o CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_mod_view.cpp
[ 39%] Linking CXX executable ../bin/demo_dox_modifier_modified_string
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_modified_string.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o -o ../bin/demo_dox_modifier_modified_string  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Built target demo_dox_modifier_modified_string
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Building CXX object demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o -MF CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o.d -o CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_nested.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_mod_view.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_mod_view.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_nested.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_nested.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_mod_view.cpp:9:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
    9 |     public std::unary_function<char, char>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_nested.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 40%] Linking CXX executable ../bin/demo_dox_modifier_modified_string_mod_view
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o -o ../bin/demo_dox_modifier_modified_string_mod_view  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Built target demo_dox_modifier_modified_string_mod_view
make  -f demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_queue_example.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_parallel_queue_example.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Building CXX object demos/CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o -MF CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o.d -o CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/parallel/queue_example.cpp
[ 40%] Linking CXX executable ../bin/demo_dox_modifier_modified_string_nested
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_modified_string_nested.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o -o ../bin/demo_dox_modifier_modified_string_nested  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Built target demo_dox_modifier_modified_string_nested
make  -f demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/DependInfo.cmake "--color="
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make  -f demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build
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[ 40%] Building CXX object demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o -MF CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o.d -o CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/parallel/splitter_example.cpp
[ 40%] Linking CXX executable ../bin/demo_dox_parallel_queue_example
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_parallel_queue_example.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o -o ../bin/demo_dox_parallel_queue_example  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/build.make demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o -MF CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o.d -o CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/pipe/pool_sorter.cpp
[ 40%] Linking CXX executable ../bin/demo_dox_parallel_splitter_example
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_parallel_splitter_example.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o -o ../bin/demo_dox_parallel_splitter_example  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Built target demo_dox_parallel_splitter_example
make  -f demos/CMakeFiles/demo_dox_score_score.dir/build.make demos/CMakeFiles/demo_dox_score_score.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_score_score.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_score_score.dir/build.make demos/CMakeFiles/demo_dox_score_score.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Building CXX object demos/CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o -MF CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o.d -o CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/score/score.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/pipe/pool_sorter.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/functional:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/pipe/pool_sorter.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/pipe/pool_sorter.cpp:13:10: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   13 |     std::binary_function<int, int, int>
      |          ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/score/score.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/score/score.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/score/score.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 40%] Linking CXX executable ../bin/demo_dox_pipe_pool_sorter
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_pipe_pool_sorter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o -o ../bin/demo_dox_pipe_pool_sorter  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Built target demo_dox_pipe_pool_sorter
make  -f demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Building CXX object demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o -MF CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o.d -o CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_add_seed.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_add_seed.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_add_seed.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 40%] Linking CXX executable ../bin/demo_dox_score_score
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_score_score.dir/link.txt --verbose=1
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o -o ../bin/demo_dox_score_score  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Built target demo_dox_score_score
make  -f demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 40%] Building CXX object demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o -MF CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o.d -o CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_chaining.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 40%] Linking CXX executable ../bin/demo_dox_seeds_seeds_add_seed
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o -o ../bin/demo_dox_seeds_seeds_add_seed  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 40%] Built target demo_dox_seeds_seeds_add_seed
make  -f demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_chaining.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_chaining.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 40%] Building CXX object demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o -MF CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o.d -o CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_extension.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_extension.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_extension.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 41%] Linking CXX executable ../bin/demo_dox_seeds_seeds_chaining
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_seeds_seeds_chaining.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o -o ../bin/demo_dox_seeds_seeds_chaining  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Built target demo_dox_seeds_seeds_chaining
make  -f demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/build.make demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/build.make demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Building CXX object demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o -MF CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o.d -o CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seq_io/fai_index_example.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seq_io/fai_index_example.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seq_io/fai_index_example.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 41%] Linking CXX executable ../bin/demo_dox_seeds_seeds_extension
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_seeds_seeds_extension.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o -o ../bin/demo_dox_seeds_seeds_extension  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Built target demo_dox_seeds_seeds_extension
make  -f demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Building CXX object demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o -MF CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o.d -o CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/UNUSED_infix.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/UNUSED_infix.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/UNUSED_infix.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 41%] Linking CXX executable ../bin/demo_dox_sequence_UNUSED_infix
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o -o ../bin/demo_dox_sequence_UNUSED_infix  -lrt -lz -lbz2
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 41%] Built target demo_dox_sequence_UNUSED_infix
make  -f demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Building CXX object demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o -MF CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o.d -o CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/UNUSED_prefix.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/UNUSED_prefix.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/UNUSED_prefix.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 41%] Linking CXX executable ../bin/demo_dox_sequence_UNUSED_prefix
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o -o ../bin/demo_dox_sequence_UNUSED_prefix  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Built target demo_dox_sequence_UNUSED_prefix
make  -f demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Building CXX object demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o -MF CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o.d -o CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/UNUSED_suffix.cpp
[ 41%] Linking CXX executable ../bin/demo_dox_seq_io_fai_index_example
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_seq_io_fai_index_example.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o -o ../bin/demo_dox_seq_io_fai_index_example  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Built target demo_dox_seq_io_fai_index_example
make  -f demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/build.make demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/build.make demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Building CXX object demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o -MF CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o.d -o CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/container_view_zip.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/UNUSED_suffix.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/UNUSED_suffix.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/container_view_zip.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/container_view_zip.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 41%] Linking CXX executable ../bin/demo_dox_sequence_UNUSED_suffix
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o -o ../bin/demo_dox_sequence_UNUSED_suffix  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Built target demo_dox_sequence_UNUSED_suffix
make  -f demos/CMakeFiles/demo_dox_sequence_segment.dir/build.make demos/CMakeFiles/demo_dox_sequence_segment.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_segment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_sequence_segment.dir/build.make demos/CMakeFiles/demo_dox_sequence_segment.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 41%] Building CXX object demos/CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o -MF CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o.d -o CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/segment.cpp
[ 43%] Linking CXX executable ../bin/demo_dox_sequence_container_view_zip
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_container_view_zip.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o -o ../bin/demo_dox_sequence_container_view_zip  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/segment.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/segment.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 43%] Built target demo_dox_sequence_container_view_zip
make  -f demos/CMakeFiles/demo_dox_sequence_string.dir/build.make demos/CMakeFiles/demo_dox_sequence_string.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_string.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_sequence_string.dir/build.make demos/CMakeFiles/demo_dox_sequence_string.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Building CXX object demos/CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o -MF CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o.d -o CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/string.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/segment.cpp: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/segment.cpp:93:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
   93 |     TExplicitPrefix preB(sufA, 3);
      |                                 ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/segment.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:89:46: note:   initializing argument 1 of 'seqan::Segment<THost, seqan::PrefixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type>::Type = long unsigned int]'
   89 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<char, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:90:29:   required from 'seqan::Segment<THost, seqan::PrefixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type>::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type = seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost, seqan::PrefixSegment> >::Type>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/segment.cpp:93:33:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_smart_pointer.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_allocator.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<char, Alloc<> >, SuffixSegment>; typename Parameter_<const T>::Type = Segment<String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:171:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(const Segment<THost, PrefixSegment>&) [with THost_ = Segment<String<char, Alloc<> >, SuffixSegment>; typename Parameter_<T>::Type = Segment<String<char, Alloc<> >, SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:206:53:   required from 'typename seqan::Iterator<const seqan::Segment<THost, seqan::PrefixSegment>, const seqan::Tag<seqan::Standard_> >::Type seqan::begin(const Segment<THost, PrefixSegment>&, Standard) [with THost_ = Segment<String<char, Alloc<> >, SuffixSegment>; typename Iterator<const Segment<THost, PrefixSegment>, const Tag<Standard_> >::Type = char*; Standard = const Tag<Standard_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1095:69:   required from 'typename seqan::EnableIf<seqan::And<seqan::IsContiguous<TContainer>, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<Segment<String<char, Alloc<> >, SuffixSegment>, PrefixSegment>; typename EnableIf<And<IsContiguous<TContainer>, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = Segment<String<char, Alloc<> >, SuffixSegment>; TSpec = PrefixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/segment.cpp:94:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 43%] Linking CXX executable ../bin/demo_dox_sequence_segment
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_segment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o -o ../bin/demo_dox_sequence_segment  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Built target demo_dox_sequence_segment
make  -f demos/CMakeFiles/demo_dox_sequence_string2.dir/build.make demos/CMakeFiles/demo_dox_sequence_string2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_string2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_sequence_string2.dir/build.make demos/CMakeFiles/demo_dox_sequence_string2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Building CXX object demos/CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o -MF CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o.d -o CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/string2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/string.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/string.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 43%] Linking CXX executable ../bin/demo_dox_sequence_string
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_string.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o -o ../bin/demo_dox_sequence_string  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/string2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/string2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Built target demo_dox_sequence_string
make  -f demos/CMakeFiles/demo_dox_sequence_stringset.dir/build.make demos/CMakeFiles/demo_dox_sequence_stringset.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_stringset.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_sequence_stringset.dir/build.make demos/CMakeFiles/demo_dox_sequence_stringset.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Building CXX object demos/CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o -MF CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o.d -o CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/stringset.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 43%] Linking CXX executable ../bin/demo_dox_sequence_string2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_string2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o -o ../bin/demo_dox_sequence_string2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Built target demo_dox_sequence_string2
make  -f demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/build.make demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/build.make demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Building CXX object demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o -MF CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o.d -o CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/stringset.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/stringset.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 43%] Linking CXX executable ../bin/demo_dox_sequence_stringset
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_stringset.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o -o ../bin/demo_dox_sequence_stringset  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Built target demo_dox_sequence_stringset
make  -f demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/build.make demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/build.make demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Building CXX object demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o -MF CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o.d -o CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/load_markov_model.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/load_markov_model.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/load_markov_model.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp:18:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp:18:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp:18:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp:18:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/build_markov_model.cpp:18:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/load_markov_model.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/statistics/load_markov_model.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 43%] Linking CXX executable ../bin/demo_dox_statistics_load_markov_model
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_statistics_load_markov_model.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o -o ../bin/demo_dox_statistics_load_markov_model  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Built target demo_dox_statistics_load_markov_model
make  -f demos/CMakeFiles/demo_dox_store_store_example.dir/build.make demos/CMakeFiles/demo_dox_store_store_example.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_store_store_example.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_store_store_example.dir/build.make demos/CMakeFiles/demo_dox_store_store_example.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Building CXX object demos/CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o -MF CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o.d -o CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:21:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:21:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:21:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:21:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:21:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:14:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:14:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:14:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:14:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:14:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/store/store_example.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 44%] Linking CXX executable ../bin/demo_dox_statistics_build_markov_model
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_statistics_build_markov_model.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o -o ../bin/demo_dox_statistics_build_markov_model  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Built target demo_dox_statistics_build_markov_model
make  -f demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build.make demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build.make demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Building CXX object demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o -MF CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o.d -o CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/stream/lexical_cast.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/stream/lexical_cast.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/stream/lexical_cast.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char [2]]',
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/stream/lexical_cast.cpp:42:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char [2]]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 44%] Linking CXX executable ../bin/demo_dox_stream_lexical_cast
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_stream_lexical_cast.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o -o ../bin/demo_dox_stream_lexical_cast  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Built target demo_dox_stream_lexical_cast
make  -f demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/build.make demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/build.make demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Building CXX object demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o -MF CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o.d -o CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/align_gaps_clipping.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/align_gaps_clipping.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/align_gaps_clipping.cpp:3:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/demo_howto_align_gaps_clipping
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_align_gaps_clipping.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o -o ../bin/demo_howto_align_gaps_clipping  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Built target demo_howto_align_gaps_clipping
make  -f demos/CMakeFiles/demo_howto_custom_file_endings.dir/build.make demos/CMakeFiles/demo_howto_custom_file_endings.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_custom_file_endings.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_howto_custom_file_endings.dir/build.make demos/CMakeFiles/demo_howto_custom_file_endings.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Building CXX object demos/CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o -MF CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o.d -o CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = MySeqFormat_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<MySeqFormat_>, TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = Tag<MyFastaAdaptor_>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::Tag<seqan::MyFastaAdaptor_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp:66:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<MySeqFormat_>, TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = Tag<MyFastaAdaptor_>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::Tag<seqan::MyFastaAdaptor_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp:66:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<MySeqFormat_>, TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = Tag<MyFastaAdaptor_>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::Tag<seqan::MyFastaAdaptor_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp:66:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<MySeqFormat_>, TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = Tag<MyFastaAdaptor_>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::Tag<seqan::MyFastaAdaptor_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp:66:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<MySeqFormat_>, TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = Tag<MyFastaAdaptor_>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::Tag<seqan::MyFastaAdaptor_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp:66:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<MySeqFormat_>, TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = Tag<MyFastaAdaptor_>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::Tag<seqan::MyFastaAdaptor_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp:66:37:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 44%] Linking CXX executable ../bin/demo_dox_store_store_example
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_store_store_example.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o -o ../bin/demo_dox_store_store_example  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Built target demo_dox_store_store_example
make  -f demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/build.make demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/build.make demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Building CXX object demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o -MF CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o.d -o CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/efficiently_import_sequences.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/efficiently_import_sequences.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 44%] Linking CXX executable ../bin/demo_howto_custom_file_endings
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_custom_file_endings.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o -o ../bin/demo_howto_custom_file_endings  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 44%] Built target demo_howto_custom_file_endings
make  -f demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/build.make demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/build.make demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Building CXX object demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o -MF CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o.d -o CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/efficiently_import_sequences.cpp:15:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/efficiently_import_sequences.cpp:15:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/efficiently_import_sequences.cpp:15:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/efficiently_import_sequences.cpp:15:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/efficiently_import_sequences.cpp:15:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:389:32:   required from 'seqan::Finder<THaystack, seqan::Swift<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:34:49:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1928:77:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:35:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1866:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:35:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1876:41:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:35:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:14:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:389:32:   required from 'seqan::Finder<THaystack, seqan::Swift<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:34:49:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:14:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1875:33:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Swift<TSwiftSpec> >&) [with TFinder = Finder<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1934:34:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:35:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:14:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:14:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:740:41:   required from 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<11> >, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:35:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<11> >, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<11> >, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<11> >, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<11> >, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<11> >]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp:14:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 44%] Linking CXX executable ../bin/demo_howto_efficiently_import_sequences
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_efficiently_import_sequences.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o -o ../bin/demo_howto_efficiently_import_sequences  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Built target demo_howto_efficiently_import_sequences
make  -f demos/CMakeFiles/demo_howto_scores_init_score.dir/build.make demos/CMakeFiles/demo_howto_scores_init_score.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_scores_init_score.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_howto_scores_init_score.dir/build.make demos/CMakeFiles/demo_howto_scores_init_score.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Building CXX object demos/CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o -MF CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o.d -o CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/init_score.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/init_score.cpp:31:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/init_score.cpp:28:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 45%] Linking CXX executable ../bin/demo_howto_scores_init_score
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_scores_init_score.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o -o ../bin/demo_howto_scores_init_score  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Built target demo_howto_scores_init_score
make  -f demos/CMakeFiles/demo_howto_scores_load_score.dir/build.make demos/CMakeFiles/demo_howto_scores_load_score.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_scores_load_score.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_howto_scores_load_score.dir/build.make demos/CMakeFiles/demo_howto_scores_load_score.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Building CXX object demos/CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o -MF CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o.d -o CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/load_score.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/load_score.cpp:27:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/load_score.cpp:24:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 45%] Linking CXX executable ../bin/demo_howto_filter_similar_sequences
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_filter_similar_sequences.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o -o ../bin/demo_howto_filter_similar_sequences  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Built target demo_howto_filter_similar_sequences
make  -f demos/CMakeFiles/demo_howto_using_zip_iterator.dir/build.make demos/CMakeFiles/demo_howto_using_zip_iterator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_using_zip_iterator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_howto_using_zip_iterator.dir/build.make demos/CMakeFiles/demo_howto_using_zip_iterator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Building CXX object demos/CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o -MF CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o.d -o CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/using_zip_iterator.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&, const ScoreMatrixFile&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, Dna5_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:140:79,
    inlined from 'void seqan::read(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, TSourceIter&) [with TValue = int; TSequenceValue = SimpleType<unsigned char, Dna5_>; TSpec = Tag<Default_>; TSourceIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:155:9,
    inlined from 'bool seqan::loadScoreMatrix(Score<TValue, ScoreMatrix<TSequenceValue, TSpec> >&, const char*) [with TValue = int; TSequenceValue = SimpleType<unsigned char, Dna5_>; TSpec = Tag<Default_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score/score_matrix_io.h:183:9,
    inlined from 'int main(int, char**)' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/load_score.cpp:61:20:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main(int, char**)':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 45%] Linking CXX executable ../bin/demo_howto_scores_load_score
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_scores_load_score.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o -o ../bin/demo_howto_scores_load_score  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Built target demo_howto_scores_load_score
make  -f demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build.make demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build.make demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Building CXX object demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o -MF CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o.d -o CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tabix_io/tabix_vcf.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/using_zip_iterator.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/refwrap.h:39,
                 from /usr/include/c++/13/vector:68,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/using_zip_iterator.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 45%] Linking CXX executable ../bin/demo_howto_using_zip_iterator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_using_zip_iterator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o -o ../bin/demo_howto_using_zip_iterator  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tabix_io/tabix_vcf.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tabix_io/tabix_vcf.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Built target demo_howto_using_zip_iterator
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tabix_io/tabix_vcf.cpp:18:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tabix_io/tabix_vcf.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tabix_io/tabix_vcf.cpp:18:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/base.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/base.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = const char*]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = const char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/base.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:183:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h: In instantiation of 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:95:28:   required from 'int seqan::globalAlignment(Align<TSource, TSpec>&, const MyersHirschberg&) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/base.cpp:22:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:348:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  348 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:368:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  368 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:370:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  370 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:398:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  398 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:423:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  423 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
[ 45%] Linking CXX executable ../bin/demo_tabix_io_tabix_vcf
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tabix_io_tabix_vcf.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o -o ../bin/demo_tabix_io_tabix_vcf  -lrt -lz -lbz2
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o -o ../bin/demo_tutorial_a_first_example_base  -lrt -lz -lbz2
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/DependInfo.cmake "--color="
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make  -f demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/depend
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make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/DependInfo.cmake "--color="
[ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code_detailed.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code_detailed.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code_detailed.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 45%] Linking CXX executable ../bin/demo_tutorial_a_first_example_basic_code
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o -o ../bin/demo_tutorial_a_first_example_basic_code  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Built target demo_tutorial_a_first_example_basic_code
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/code_encapsulation.cpp
[ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_basic_code_detailed
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o -o ../bin/demo_tutorial_a_first_example_basic_code_detailed  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Built target demo_tutorial_a_first_example_basic_code_detailed
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/example_tags.cpp
[ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_example_tags
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o -o ../bin/demo_tutorial_a_first_example_example_tags  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Built target demo_tutorial_a_first_example_example_tags
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/example_tags_for_print.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/code_encapsulation.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/code_encapsulation.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_code_encapsulation
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o -o ../bin/demo_tutorial_a_first_example_code_encapsulation  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Built target demo_tutorial_a_first_example_code_encapsulation
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/example_tags_for_print.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/example_tags_for_print.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/example_tempSubclassing.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_example_tempSubclassing
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/link.txt --verbose=1
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o -o ../bin/demo_tutorial_a_first_example_example_tempSubclassing  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Built target demo_tutorial_a_first_example_example_tempSubclassing
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/final_result.cpp
[ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_example_tags_for_print
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o -o ../bin/demo_tutorial_a_first_example_example_tags_for_print  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Built target demo_tutorial_a_first_example_example_tags_for_print
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/final_result.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/final_result.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 47%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Built target demo_tutorial_a_first_example_solution_1
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_2.cpp
[ 47%] Linking CXX executable ../bin/demo_tutorial_a_first_example_final_result
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_final_result.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o -o ../bin/demo_tutorial_a_first_example_final_result  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Built target demo_tutorial_a_first_example_final_result
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_3.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_3.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 47%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_3  -lrt -lz -lbz2
[ 47%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Built target demo_tutorial_a_first_example_solution_3
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Built target demo_tutorial_a_first_example_solution_2
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/DependInfo.cmake "--color="
[ 47%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_4.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_4_templateSubclassing.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_4.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_4.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_4_templateSubclassing.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_4_templateSubclassing.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 47%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Built target demo_tutorial_a_first_example_solution_4
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_5.cpp
[ 47%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_4_templateSubclassing
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_4_templateSubclassing  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Built target demo_tutorial_a_first_example_solution_4_templateSubclassing
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_6.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_5.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_5.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_6.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_6.cpp:3:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 47%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_5
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_5  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 47%] Built target demo_tutorial_a_first_example_solution_5
make  -f demos/CMakeFiles/demo_tutorial_alignment_align.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_align.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_align.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o -MF CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align.cpp
[ 48%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_6
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_6  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Built target demo_tutorial_a_first_example_solution_6
make  -f demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align_assignment1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align.cpp: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align.cpp:138:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  138 |     it = begin(row1);
      |                    ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align.cpp:139:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  139 |     itEnd = end(row1);
      |                     ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align_assignment1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align_assignment1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 48%] Linking CXX executable ../bin/demo_tutorial_alignment_align_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o -o ../bin/demo_tutorial_alignment_align_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Built target demo_tutorial_alignment_align_assignment1
make  -f demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_graph.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o -MF CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph.cpp
[ 48%] Linking CXX executable ../bin/demo_tutorial_alignment_align
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_align.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o -o ../bin/demo_tutorial_alignment_align  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Built target demo_tutorial_alignment_align
make  -f demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph_assignment1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph_assignment1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph_assignment1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 48%] Linking CXX executable ../bin/demo_tutorial_alignment_graph_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o -o ../bin/demo_tutorial_alignment_graph_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Built target demo_tutorial_alignment_graph_assignment1
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o -MF CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_affine_dgs.cpp
[ 48%] Linking CXX executable ../bin/demo_tutorial_alignment_graph
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_graph.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o -o ../bin/demo_tutorial_alignment_graph  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Built target demo_tutorial_alignment_graph
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o -MF CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_matrix.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_affine_dgs.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_affine_dgs.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_matrix.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_matrix.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 48%] Linking CXX executable ../bin/demo_tutorial_alignment_scoring_scheme_affine_dgs
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o -o ../bin/demo_tutorial_alignment_scoring_scheme_affine_dgs  -lrt -lz -lbz2
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o -o ../bin/demo_tutorial_alignment_scoring_scheme_matrix  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Built target demo_tutorial_alignment_scoring_scheme_affine_dgs
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/depend
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o -MF CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_simple.cpp
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/assignment_1.cpp
[ 49%] Linking CXX executable ../bin/demo_tutorial_alphabets_assignment_1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o -o ../bin/demo_tutorial_alphabets_assignment_1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Built target demo_tutorial_alphabets_assignment_1
make  -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/assignment_1_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_simple.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_simple.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 49%] Linking CXX executable ../bin/demo_tutorial_alphabets_assignment_1_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_alphabets_assignment_1_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Built target demo_tutorial_alphabets_assignment_1_solution
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/example_bitsPerValue.cpp
[ 49%] Linking CXX executable ../bin/demo_tutorial_alphabets_example_bitsPerValue
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o -o ../bin/demo_tutorial_alphabets_example_bitsPerValue  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Built target demo_tutorial_alphabets_example_bitsPerValue
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/example_ordValue.cpp
[ 49%] Linking CXX executable ../bin/demo_tutorial_alphabets_example_ordValue
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o -o ../bin/demo_tutorial_alphabets_example_ordValue  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Built target demo_tutorial_alphabets_example_ordValue
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/example_size.cpp
[ 49%] Linking CXX executable ../bin/demo_tutorial_alignment_scoring_scheme_simple
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o -o ../bin/demo_tutorial_alignment_scoring_scheme_simple  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Built target demo_tutorial_alignment_scoring_scheme_simple
make  -f demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build.make demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/depend
[ 49%] Linking CXX executable ../bin/demo_tutorial_alphabets_example_size
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_example_size.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o -o ../bin/demo_tutorial_alphabets_example_size  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build.make demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Building CXX object demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o -MF CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o.d -o CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/background_and_motivation/example.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Built target demo_tutorial_alphabets_example_size
make  -f demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/build.make demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Building CXX object demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o -MF CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o.d -o CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basic_techniques/base.cpp
[ 49%] Linking CXX executable ../bin/demo_tutorial_basic_techniques_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basic_techniques_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o -o ../bin/demo_tutorial_basic_techniques_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Built target demo_tutorial_basic_techniques_base
make  -f demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build.make demos/CMakeFiles/demo_tutorial_basics_allocator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_allocator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build.make demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Building CXX object demos/CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o -MF CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o.d -o CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/allocator.cpp
[ 50%] Linking CXX executable ../bin/demo_tutorial_background_and_motivation_example
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_background_and_motivation_example.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o -o ../bin/demo_tutorial_background_and_motivation_example  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 50%] Built target demo_tutorial_background_and_motivation_example
make  -f demos/CMakeFiles/demo_tutorial_basics_base.dir/build.make demos/CMakeFiles/demo_tutorial_basics_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_basics_base.dir/build.make demos/CMakeFiles/demo_tutorial_basics_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o -MF CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o.d -o CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/base.cpp
[ 50%] Linking CXX executable ../bin/demo_tutorial_basics_allocator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basics_allocator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o -o ../bin/demo_tutorial_basics_allocator  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 50%] Built target demo_tutorial_basics_allocator
make  -f demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/build.make demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/build.make demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o -MF CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o.d -o CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/show_alphabets.cpp
[ 50%] Linking CXX executable ../bin/demo_tutorial_basics_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basics_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o -o ../bin/demo_tutorial_basics_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 50%] Built target demo_tutorial_basics_base
make  -f demos/CMakeFiles/demo_tutorial_basics_strings.dir/build.make demos/CMakeFiles/demo_tutorial_basics_strings.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_strings.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_basics_strings.dir/build.make demos/CMakeFiles/demo_tutorial_basics_strings.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o -MF CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o.d -o CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/strings.cpp
[ 50%] Linking CXX executable ../bin/demo_tutorial_basics_show_alphabets
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basics_show_alphabets.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o -o ../bin/demo_tutorial_basics_show_alphabets  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 50%] Built target demo_tutorial_basics_show_alphabets
make  -f demos/CMakeFiles/demo_tutorial_bed_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_bed_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/strings.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/strings.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/base.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/base.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 51%] Linking CXX executable ../bin/demo_tutorial_bed_io_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o -o ../bin/demo_tutorial_bed_io_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Built target demo_tutorial_bed_io_base
make  -f demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/DependInfo.cmake "--color="
[ 51%] Linking CXX executable ../bin/demo_tutorial_basics_strings
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basics_strings.dir/link.txt --verbose=1
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o -o ../bin/demo_tutorial_basics_strings  -lrt -lz -lbz2
[ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/example1.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Built target demo_tutorial_basics_strings
make  -f demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/example1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Bed_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/example1.cpp:7:84:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Bed_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/example1.cpp:7:84:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution1.cpp:9:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution1.cpp:9:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:113:43,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed3_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed3_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/example1.cpp:17:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:119:41,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed3_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed3_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/example1.cpp:17:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:113:43,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed3_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed3_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution1.cpp:24:23:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:119:41,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed3_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed3_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution1.cpp:24:23:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 51%] Linking CXX executable ../bin/demo_tutorial_bed_io_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o -o ../bin/demo_tutorial_bed_io_example1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Built target demo_tutorial_bed_io_example1
make  -f demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution2.cpp
[ 51%] Linking CXX executable ../bin/demo_tutorial_bed_io_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o -o ../bin/demo_tutorial_bed_io_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Built target demo_tutorial_bed_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution2.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution2.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution2.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution3.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:113:43,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed3_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed3_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution2.cpp:28:23:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:119:41,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed3_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed3_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution2.cpp:28:23:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 51%] Linking CXX executable ../bin/demo_tutorial_bed_io_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_solution3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o -o ../bin/demo_tutorial_bed_io_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Built target demo_tutorial_bed_io_solution3
make  -f demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o -MF CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o.d -o CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/read_assignment.cpp
[ 51%] Linking CXX executable ../bin/demo_tutorial_bed_io_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o -o ../bin/demo_tutorial_bed_io_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Built target demo_tutorial_bed_io_solution2
make  -f demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o -MF CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o.d -o CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/write_assignment.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/read_assignment.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/read_assignment.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/write_assignment.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/write_assignment.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = BlastTabular_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<BlastTabular_>; TDirection = Tag<Input_>; TSpec = BlastIOContext<>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::BlastTabular_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::BlastIOContext<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/read_assignment.cpp:21:46:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast.h:54:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = BlastTabular_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<BlastTabular_>; TDirection = Tag<Output_>; TSpec = BlastIOContext<>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::BlastTabular_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = seqan::BlastIOContext<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/write_assignment.cpp:51:50:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast.h:54:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = BlastTabular_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<BlastTabular_>; TDirection = Tag<Input_>; TSpec = BlastIOContext<>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::BlastTabular_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = seqan::BlastIOContext<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/read_assignment.cpp:21:46:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = BlastTabular_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<BlastTabular_>; TDirection = Tag<Output_>; TSpec = BlastIOContext<>; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::BlastTabular_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = seqan::BlastIOContext<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/write_assignment.cpp:51:50:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = std::__cxx11::basic_string<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = std::__cxx11::basic_string<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = Segment<std::__cxx11::basic_string<char>, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::Segment<std::__cxx11::basic_string<char>, seqan::InfixSegment>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = std::__cxx11::basic_string<char>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = std::__cxx11::basic_string<char>]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 51%] Linking CXX executable ../bin/demo_tutorial_blast_io_write_assignment
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o -o ../bin/demo_tutorial_blast_io_write_assignment  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Built target demo_tutorial_blast_io_write_assignment
make  -f demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o -MF CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o.d -o CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:68:
In member function 'constexpr const std::array<_Tp, _Nm>::value_type& std::array<_Tp, _Nm>::operator[](size_type) const [with _Tp = const seqan::BlastMatchField<>::Enum; long unsigned int _Nm = 12]',
    inlined from 'void seqan::_readCommentLinesImpl(BlastRecord<TSpecs ...>&, TFwdIterator&, BlastIOContext<TScore, p, h>&, const BlastTabular&) [with TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_tabular_in.h:345:74:
/usr/include/c++/13/array:213:24: warning: array subscript 12 is above array bounds of 'std::__array_traits<const seqan::BlastMatchField<>::Enum, 12>::_Type' {aka 'const seqan::BlastMatchField<>::Enum [12]'} [-Warray-bounds=]
  213 |         return _M_elems[__n];
      |                ~~~~~~~~^
/usr/include/c++/13/array: In function 'void seqan::_readCommentLinesImpl(BlastRecord<TSpecs ...>&, TFwdIterator&, BlastIOContext<TScore, p, h>&, const BlastTabular&) [with TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]':
/usr/include/c++/13/array:109:55: note: while referencing 'std::array<const seqan::BlastMatchField<>::Enum, 12>::_M_elems'
  109 |       typename __array_traits<_Tp, _Nm>::_Type        _M_elems;
      |                                                       ^~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readField(BlastMatch<TAlignRow0, TAlignRow1, TPos, TQId, TSId>&, BlastRecord<TSpecs ...>&, BlastIOContext<TScore, p, h>&, BlastMatchField<>::Enum) [with TAlignRow0 = Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TAlignRow1 = Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TPos = unsigned int; TQId = std::__cxx11::basic_string<char>; TSId = std::__cxx11::basic_string<char>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/blast/blast_tabular_in.h:582:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readField(BlastMatch<TAlignRow0, TAlignRow1, TPos, TQId, TSId>&, BlastRecord<TSpecs ...>&, BlastIOContext<TScore, p, h>&, BlastMatchField<>::Enum) [with TAlignRow0 = Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TAlignRow1 = Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Tag<ArrayGaps_> >; TPos = unsigned int; TQId = std::__cxx11::basic_string<char>; TSId = std::__cxx11::basic_string<char>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >; TSpecs = {BlastMatch<Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, Gaps<String<SimpleType<unsigned char, AminoAcid_>, Alloc<void> >, Tag<ArrayGaps_> >, unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, String<unsigned int, Alloc<void> > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned int}; BlastProgram p = seqan::BlastProgram::DYNAMIC; BlastTabularSpec h = seqan::BlastTabularSpec::DYNAMIC]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/demo_tutorial_blast_io_read_assignment
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o -o ../bin/demo_tutorial_blast_io_read_assignment  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Built target demo_tutorial_blast_io_read_assignment
make  -f demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o -MF CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o.d -o CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:45:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:45:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:45:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:45:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:45:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h: In instantiation of 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:404:32: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  404 |             for (TReadGapsIter itR2 = itR; itR2 != itREnd; ++itR2)
      |                                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:223:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:370:17:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:969:48:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Standard_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:395:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:932:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:941:46:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:136:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, FractionalScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; FractionalScore = const Tag<FractionalScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:272:24:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, const TScore&, ReScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; TScore = Score<int, Tag<Simple_> >; ReScore = const Tag<ReScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:384:24:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:295:23:   required from 'bool seqan::alignmentGraphToFragmentStore(TFragmentStore&, const Graph<Alignment<StringSet<TSequence, TSetSpec>, TCargo, TSpec> >&, const Graph<Undirected<double> >&, const String<unsigned int, Alloc<> >&, const String<unsigned int, Alloc<> >&, unsigned int, bool) [with TFragmentStore = FragmentStore<>; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TCargo = unsigned int; TSetSpec = Dependent<Tag<TagInsist_> >; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:427:34:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:280:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = unsigned int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:930:19:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::_endContig(unsigned int) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:697:5:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:56:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:513:15:   required from 'void seqan::insertGap(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >; TPosition = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1610:30:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_updateAlignments(unsigned int, unsigned int&, TProfileString&, seqan::Gaps<seqan::String<seqan::ProfileChar<typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type> > >&, seqan::Gaps<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>&, seqan::ExtractProfileInfo_&, const seqan::WindowClippingInfo_&, const TAlignedReadIter&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5_>; typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5Q_>; typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; typename TFragmentStore::TReadSeqStore = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TAlignedReadIter = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1321:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TValue2 = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Pigeonhole<>; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:463:41:   required from 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:370:17:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:17:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:382:27:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp:51:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:34:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:34:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:34:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h: In instantiation of 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:404:32: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  404 |             for (TReadGapsIter itR2 = itR; itR2 != itREnd; ++itR2)
      |                                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:34:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:34:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:223:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:370:17:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:518:35: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  518 |         indexShape(host(pattern)) = pattern.shape;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:969:48:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Standard_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:395:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::host(Finder<THaystack, TSpec>&) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Pigeonhole<>; typename Parameter_<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:932:36:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:585:38: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  585 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:941:46:   required from 'bool seqan::_firstNonRepeatRange(TFinder&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&) [with TFinder = Finder<const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Pigeonhole<> >; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:975:34:   required from 'bool seqan::find(Finder<THaystack, Pigeonhole<TPigeonholeSpec> >&, Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, double) [with THaystack = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:377:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, unsigned int, Tag<Default_> > >; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:136:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, FractionalScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; FractionalScore = const Tag<FractionalScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:272:24:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, const TScore&, ReScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >; TCargo = unsigned int; TSpec = Tag<Default_>; TScore = Score<int, Tag<Simple_> >; ReScore = const Tag<ReScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:384:24:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:295:23:   required from 'bool seqan::alignmentGraphToFragmentStore(TFragmentStore&, const Graph<Alignment<StringSet<TSequence, TSetSpec>, TCargo, TSpec> >&, const Graph<Undirected<double> >&, const String<unsigned int, Alloc<> >&, const String<unsigned int, Alloc<> >&, unsigned int, bool) [with TFragmentStore = FragmentStore<>; TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TCargo = unsigned int; TSetSpec = Dependent<Tag<TagInsist_> >; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:427:34:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:280:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = unsigned int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:930:19:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::_endContig(unsigned int) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:697:5:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:376:20:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:229:32:   required from 'seqan::Finder<THaystack, seqan::Pigeonhole<TSpec> >::Finder(THaystack&) [with THaystack = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:376:23:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:56:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:513:15:   required from 'void seqan::insertGap(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >; TPosition = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1610:30:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_updateAlignments(unsigned int, unsigned int&, TProfileString&, seqan::Gaps<seqan::String<seqan::ProfileChar<typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type> > >&, seqan::Gaps<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>&, seqan::ExtractProfileInfo_&, const seqan::WindowClippingInfo_&, const TAlignedReadIter&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5_>; typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5Q_>; typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; typename TFragmentStore::TReadSeqStore = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TAlignedReadIter = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1321:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TString2 = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:352:20:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSource = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TValue2 = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TSpec = Pigeonhole<>; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_pigeonhole.h:463:41:   required from 'void seqan::_patternInit(Pattern<TIndex, Pigeonhole<TPigeonholeSpec> >&, TFloat) [with TIndex = Index<const StringSet<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Dependent<Tag<TagInsist_> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna5Q_>, OneGappedShape>, Tag<OpenAddressing_> > >; TFloat = double; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:370:17:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&, const std::vector<unsigned int>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:334:30:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::buildAllToAllOverlapInfos(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:163:34:   required from 'void seqan::OverlapInfoComputation_<TFragmentStore>::run(std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:160:22:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:86:11: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
   86 |     class Index<TObject, IndexQGram<TShapeSpec, OpenAddressing> >
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna5Q_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<const seqan::StringSet<seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::OneGappedShape>, seqan::Tag<seqan::OpenAddressing_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:624:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<AffineGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:99:44:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequence = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = true; bool RIGHT = true; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<Gotoh_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:17:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, True, True, True> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, True, True, True> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<AffineGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, True, True, True>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlapper.h:354:24:   required from 'bool seqan::Overlapper_<TFragments, TSequence>::computeOverlap(seqan::Overlap_&, TFragments&, const TSequence&, const TSequence&, const seqan::OverlapCandidate_&) const [with TFragments = seqan::String<seqan::Fragment<> >; TSequence = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:138:38:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::computeOverlaps(TFragments&, seqan::String<int>&, seqan::Graph<seqan::Undirected<double> >&, const TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>; TFragments = seqan::String<seqan::Fragment<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_builder.h:370:5:   required from 'void seqan::ConsensusBuilder_<TFragmentStore>::run(TFragmentStore&, const std::vector<seqan::OverlapInfo_>&) const [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner.h:170:20:   required from 'void seqan::ConsensusAligner_<TFragmentStore>::run() [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:141:16:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:382:27:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_aligner_interface.h:145:24:   required from 'void seqan::consensusAlignment(FragmentStore<TSpec, TConfig>&, const ConsensusAlignmentOptions&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp:29:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
[ 52%] Linking CXX executable ../bin/demo_tutorial_consensus_alignment_with_positions
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o -o ../bin/demo_tutorial_consensus_alignment_with_positions  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Built target demo_tutorial_consensus_alignment_with_positions
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o -MF CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o.d -o CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/example1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/example1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/demo_tutorial_consensus_alignment_without_positions
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o -o ../bin/demo_tutorial_consensus_alignment_without_positions  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Built target demo_tutorial_consensus_alignment_without_positions
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o -MF CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 52%] Linking CXX executable ../bin/demo_tutorial_file_io_overview_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_file_io_overview_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o -o ../bin/demo_tutorial_file_io_overview_example1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Built target demo_tutorial_file_io_overview_example1
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o -MF CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution2.cpp
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution2.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 52%] Linking CXX executable ../bin/demo_tutorial_file_io_overview_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o -o ../bin/demo_tutorial_file_io_overview_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Built target demo_tutorial_file_io_overview_solution1
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o -MF CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution3.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 52%] Linking CXX executable ../bin/demo_tutorial_file_io_overview_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o -o ../bin/demo_tutorial_file_io_overview_solution2  -lrt -lz -lbz2
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 52%] Built target demo_tutorial_file_io_overview_solution2
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o -MF CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o.d -o CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp
[ 53%] Linking CXX executable ../bin/demo_tutorial_file_io_overview_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o -o ../bin/demo_tutorial_file_io_overview_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Built target demo_tutorial_file_io_overview_solution3
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o -MF CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o.d -o CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 53%] Linking CXX executable ../bin/demo_tutorial_fragment_store_access_aligned_reads
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o -o ../bin/demo_tutorial_fragment_store_access_aligned_reads  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Built target demo_tutorial_fragment_store_access_aligned_reads
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o -MF CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o.d -o CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/base.cpp
[ 53%] Linking CXX executable ../bin/demo_tutorial_fragment_store_access_aligned_reads2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o -o ../bin/demo_tutorial_fragment_store_access_aligned_reads2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Built target demo_tutorial_fragment_store_access_aligned_reads2
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o -MF CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o.d -o CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/base.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/base.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:25:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:25:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:25:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:25:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:25:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 53%] Linking CXX executable ../bin/demo_tutorial_fragment_store_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_fragment_store_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o -o ../bin/demo_tutorial_fragment_store_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Built target demo_tutorial_fragment_store_base
make  -f demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/build.make demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/build.make demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o -MF CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o.d -o CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/generic_programming/example_hashing.cpp
[ 53%] Linking CXX executable ../bin/demo_tutorial_generic_programming_example_hashing
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o -o ../bin/demo_tutorial_generic_programming_example_hashing  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Built target demo_tutorial_generic_programming_example_hashing
make  -f demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/build.make demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/build.make demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o -MF CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o.d -o CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/generic_programming/template_subclassing.cpp
[ 53%] Linking CXX executable ../bin/demo_tutorial_generic_programming_template_subclassing
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o -o ../bin/demo_tutorial_generic_programming_template_subclassing  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 53%] Built target demo_tutorial_generic_programming_template_subclassing
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_hint.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_hint.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_hint.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_hint.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_hint.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_hint.cpp:11:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_hint.cpp:11:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:379:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:386:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 54%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_1_hint
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_1_hint  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Built target demo_tutorial_genome_annotations_assignment_1_hint
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 54%] Linking CXX executable ../bin/demo_tutorial_fragment_store_display_aligned_reads
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o -o ../bin/demo_tutorial_fragment_store_display_aligned_reads  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Built target demo_tutorial_fragment_store_display_aligned_reads
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_2_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_solution.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_2_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_2_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_solution.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_solution.cpp:10:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_solution.cpp:10:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_2_solution.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_2_solution.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_2_solution.cpp:11:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_2_solution.cpp:11:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:379:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:386:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:379:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:386:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 54%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_1_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_1_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Built target demo_tutorial_genome_annotations_assignment_1_solution
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_3_solution.cpp
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_3_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_3_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 54%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_2_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_2_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Built target demo_tutorial_genome_annotations_assignment_2_solution
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_4_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_3_solution.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_4_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_4_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_3_solution.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_3_solution.cpp:11:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_3_solution.cpp:11:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_4_solution.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_4_solution.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_4_solution.cpp:11:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_4_solution.cpp:11:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:379:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:386:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:379:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:386:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 54%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_3_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_3_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Built target demo_tutorial_genome_annotations_assignment_3_solution
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/base.cpp
[ 54%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_4_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_4_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Built target demo_tutorial_genome_annotations_assignment_4_solution
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/base.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/base.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 55%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_base  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Built target demo_tutorial_gff_and_gtf_io_base
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h: In instantiation of 'seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> > seqan::nodeRight(const Iter<TFragmentStore, AnnotationTree<TSpec> >&) [with TFragmentStore = FragmentStore<>; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/base.cpp:34:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:876:50: warning: implicitly-declared 'constexpr seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >::Iter(const seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >&)' is deprecated [-Wdeprecated-copy]
  876 |     Iter<TFragmentStore, AnnotationTree<TSpec> > tmp(it);
      |                                                  ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:272:5: note: because 'seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >' has user-provided 'const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >& seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >::operator=(const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >&) [with TFragmentStore = seqan::FragmentStore<>; TSpec = void]'
  272 |     operator = (Iter const &_origin)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:878:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >::Iter(const seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >&)' is deprecated [-Wdeprecated-copy]
  878 |     return tmp;
      |            ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:272:5: note: because 'seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >' has user-provided 'const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >& seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >::operator=(const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >&) [with TFragmentStore = seqan::FragmentStore<>; TSpec = void]'
  272 |     operator = (Iter const &_origin)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h: In instantiation of 'seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> > seqan::createSibling(Iter<TFragmentStore, AnnotationTree<TSpec> >&) [with TFragmentStore = FragmentStore<>; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/base.cpp:60:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:1071:50: warning: implicitly-declared 'constexpr seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >::Iter(const seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >&)' is deprecated [-Wdeprecated-copy]
 1071 |     Iter<TFragmentStore, AnnotationTree<TSpec> > siblingIter(it);
      |                                                  ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:272:5: note: because 'seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >' has user-provided 'const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >& seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >::operator=(const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >&) [with TFragmentStore = seqan::FragmentStore<>; TSpec = void]'
  272 |     operator = (Iter const &_origin)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:1073:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >::Iter(const seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >&)' is deprecated [-Wdeprecated-copy]
 1073 |     return siblingIter;
      |            ^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:272:5: note: because 'seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >' has user-provided 'const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >& seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >::operator=(const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >&) [with TFragmentStore = seqan::FragmentStore<>; TSpec = void]'
  272 |     operator = (Iter const &_origin)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/base.cpp:19:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/base.cpp:19:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example1.cpp:12:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example1.cpp:12:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example1.cpp:12:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 55%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_example1  -lrt -lz -lbz2
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Built target demo_tutorial_gff_and_gtf_io_example1
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example2.cpp:12:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example2.cpp:12:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example2.cpp:12:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 55%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o -o ../bin/demo_tutorial_genome_annotations_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Built target demo_tutorial_genome_annotations_base
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution1.cpp:12:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution1.cpp:12:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution1.cpp:12:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 55%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_example2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_example2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Built target demo_tutorial_gff_and_gtf_io_example2
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution2.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution2.cpp:13:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution2.cpp:13:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution2.cpp:13:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 55%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Built target demo_tutorial_gff_and_gtf_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution3.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:379:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:386:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 55%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Built target demo_tutorial_gff_and_gtf_io_solution2
make  -f demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Building CXX object demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o -MF CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o.d -o CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_algo_scc.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_algo_scc.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_algo_scc.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 55%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Built target demo_tutorial_gff_and_gtf_io_solution3
make  -f demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 55%] Building CXX object demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o -MF CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o.d -o CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_dijkstra.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_dijkstra.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_dijkstra.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_dijkstra.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 56%] Linking CXX executable ../bin/demo_tutorial_graph_graph_algo_scc
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o -o ../bin/demo_tutorial_graph_graph_algo_scc  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Built target demo_tutorial_graph_graph_algo_scc
make  -f demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o -MF CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o.d -o CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_hmm.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_hmm.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_hmm.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 56%] Linking CXX executable ../bin/demo_tutorial_graph_graph_dijkstra
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o -o ../bin/demo_tutorial_graph_graph_dijkstra  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Built target demo_tutorial_graph_graph_dijkstra
make  -f demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o -MF CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o.d -o CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/solution_1.cpp
[ 56%] Linking CXX executable ../bin/demo_tutorial_graph_graph_hmm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_graph_graph_hmm.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o -o ../bin/demo_tutorial_graph_graph_hmm  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Built target demo_tutorial_graph_graph_hmm
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/solution_1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/solution_1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/solution_1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 56%] Linking CXX executable ../bin/demo_tutorial_graph_solution_1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_graph_solution_1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o -o ../bin/demo_tutorial_graph_solution_1  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Built target demo_tutorial_graph_solution_1
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDown(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = ParentLinks<Postorder>; TDfsOrder = Postorder_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = ParentLinks<Postorder>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1586:26:   required from 'void seqan::goBegin(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:23:12:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1838:27: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1838 |             oldParentDesc = nodeUp(it);
      |             ~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:19:83:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = TopDown<ParentLinks<Postorder> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1583:15:   required from 'void seqan::goBegin(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<ParentLinks<Postorder> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:23:12:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:19:83:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:26:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:26:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp:32:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:22:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:22:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:109:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp:18:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 56%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o -o ../bin/demo_tutorial_index_iterators_index_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Built target demo_tutorial_index_iterators_index_assignment1
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 56%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_assignment2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o -o ../bin/demo_tutorial_index_iterators_index_assignment2  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:21:40:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >, seqan::Alloc<> >; TValue = seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >; TTargetSpec = Alloc<>; TValue = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >, Alloc<> >&; TSource = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:494:16:   required from 'void seqan::_historyPush(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<ParentLinks<TSpec> > > >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bifm_stree.h:92:17:   required from 'bool seqan::_goDownString(Iter<Index<TText, BidirectionalIndex<FMIndex<TSpec, TConfig> > >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&, TDirection) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>; TSpec = ParentLinks<>; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSize = long unsigned int; TDirection = Tag<BidirectionalFwd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:271:25:   required from 'bool seqan::_goDownObject(Iter<Index<TText, BidirectionalIndex<TIndexSpec> >, VSTree<TopDown<TSpec> > >&, const TObject&, True, TDirection) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TSpec = ParentLinks<>; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TDirection = Tag<BidirectionalFwd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:300:25:   required from 'bool seqan::goDown(Iter<Index<TText, BidirectionalIndex<TIndexSpec> >, VSTree<TopDown<TSpec> > >&, const TObject&, const Fwd&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TSpec = ParentLinks<>; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; Fwd = Tag<BidirectionalFwd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:17:7:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >::HistoryStackFM_(const seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:172:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:70:5: note: because 'seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >' has user-provided 'const seqan::HistoryStackFM_<TSize, TAlphabet>& seqan::HistoryStackFM_<TSize, TAlphabet>::operator=(const seqan::HistoryStackFM_<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
   70 |     operator=(HistoryStackFM_ const & _origin)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:21:40:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 56%] Built target demo_tutorial_index_iterators_index_assignment2
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >*; TParam = seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >*; TParam = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >, seqan::Alloc<> >; TValue = seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >; TTargetSpec = Alloc<>; TValue = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >, Alloc<> >&; TSource = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:494:16:   required from 'void seqan::_historyPush(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<ParentLinks<TSpec> > > >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bifm_stree.h:92:17:   required from 'bool seqan::_goDownString(Iter<Index<TText, BidirectionalIndex<FMIndex<TSpec, TConfig> > >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&, TDirection) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>; TSpec = ParentLinks<>; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSize = long unsigned int; TDirection = Tag<BidirectionalFwd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:271:25:   required from 'bool seqan::_goDownObject(Iter<Index<TText, BidirectionalIndex<TIndexSpec> >, VSTree<TopDown<TSpec> > >&, const TObject&, True, TDirection) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TSpec = ParentLinks<>; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TDirection = Tag<BidirectionalFwd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:300:25:   required from 'bool seqan::goDown(Iter<Index<TText, BidirectionalIndex<TIndexSpec> >, VSTree<TopDown<TSpec> > >&, const TObject&, const Fwd&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TSpec = ParentLinks<>; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; Fwd = Tag<BidirectionalFwd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:17:7:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >::HistoryStackFM_(const seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:70:5: note: because 'seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >' has user-provided 'const seqan::HistoryStackFM_<TSize, TAlphabet>& seqan::HistoryStackFM_<TSize, TAlphabet>::operator=(const seqan::HistoryStackFM_<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
   70 |     operator=(HistoryStackFM_ const & _origin)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >*; TParam = seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >*; TParam = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >, seqan::Alloc<> >; TValue = seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >; TTargetSpec = Alloc<>; TValue = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >, Alloc<> >&; TSource = HistoryStackFM_<long unsigned int, SimpleType<unsigned char, Dna_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:494:16:   required from 'void seqan::_historyPush(Iter<Index<TText, FMIndex<TSpec, TConfig> >, VSTree<TopDown<ParentLinks<TSpec> > > >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>; TSpec = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bifm_stree.h:92:17:   required from 'bool seqan::_goDownString(Iter<Index<TText, BidirectionalIndex<FMIndex<TSpec, TConfig> > >, VSTree<TopDown<TSpec> > >&, const TString&, TSize&, TDirection) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>; TSpec = ParentLinks<>; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSize = long unsigned int; TDirection = Tag<BidirectionalFwd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:271:25:   required from 'bool seqan::_goDownObject(Iter<Index<TText, BidirectionalIndex<TIndexSpec> >, VSTree<TopDown<TSpec> > >&, const TObject&, True, TDirection) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TSpec = ParentLinks<>; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TDirection = Tag<BidirectionalFwd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:300:25:   required from 'bool seqan::goDown(Iter<Index<TText, BidirectionalIndex<TIndexSpec> >, VSTree<TopDown<TSpec> > >&, const TObject&, const Fwd&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TSpec = ParentLinks<>; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; Fwd = Tag<BidirectionalFwd_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:17:7:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >::HistoryStackFM_(const seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:70:5: note: because 'seqan::HistoryStackFM_<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna_> >' has user-provided 'const seqan::HistoryStackFM_<TSize, TAlphabet>& seqan::HistoryStackFM_<TSize, TAlphabet>::operator=(const seqan::HistoryStackFM_<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna_>]'
   70 |     operator=(HistoryStackFM_ const & _origin)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<void, FastFMIndexConfig<void, unsigned int> >; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FastFMIndexConfig<void, unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:114:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec2> > > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> >; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FastFMIndexConfig<void, unsigned int> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp:13:59:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp:17:82:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp:17:82:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp:21:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDown(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = ParentLinks<>; TDfsOrder = Preorder_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = ParentLinks<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2256:24:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:268:11:   required from 'const seqan::Iter<TContainer, TSpec>& seqan::operator++(Iter<TContainer, TSpec>&) [with TContainer = Index<String<char, Alloc<> > >; TSpec = VSTree<TopDown<ParentLinks<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp:22:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1838:27: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1838 |             oldParentDesc = nodeUp(it);
      |             ~~~~~~~~~~~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:268:11:   required from 'const seqan::Iter<TContainer, TSpec>& seqan::operator++(Iter<TContainer, TSpec>&) [with TContainer = Index<String<char, Alloc<> > >; TSpec = VSTree<TopDown<ParentLinks<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp:22:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp:21:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_preorder
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o -o ../bin/demo_tutorial_index_iterators_index_preorder  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Built target demo_tutorial_index_iterators_index_preorder
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_property_maps.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_property_maps.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_property_maps.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_property_maps.cpp:40:98:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_property_maps.cpp:40:98:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_property_maps
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o -o ../bin/demo_tutorial_index_iterators_index_property_maps  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Built target demo_tutorial_index_iterators_index_property_maps
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_bidirectional_search
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o -o ../bin/demo_tutorial_index_iterators_index_bidirectional_search  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Built target demo_tutorial_index_iterators_index_bidirectional_search
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp:17:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TValue = char]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1963:27:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, False) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp:25:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1898:23: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1898 |             value(it) = nodeDesc;
      |             ~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp:17:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1897:25:   required from 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TValue = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1963:27:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, False) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp:25:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1751:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1751 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp:30:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp:30:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search2.cpp:13:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search2.cpp:13:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TValue = char]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1928:27:   required from 'bool seqan::_goDownString(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TString = char [5]; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search2.cpp:17:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1898:23: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1898 |             value(it) = nodeDesc;
      |             ~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1897:25:   required from 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TValue = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1928:27:   required from 'bool seqan::_goDownString(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TString&, TSize&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TString = char [5]; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1974:29:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, True) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder; TObject = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search2.cpp:17:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1751:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1751 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
[ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_search
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_search.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o -o ../bin/demo_tutorial_index_iterators_index_search  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Built target demo_tutorial_index_iterators_index_search
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_assignment2.cpp
[ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_search2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o -o ../bin/demo_tutorial_index_iterators_index_search2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Built target demo_tutorial_index_iterators_index_search2
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_assignment2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_assignment2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_assignment2.cpp:10:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_assignment2.cpp:10:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TValue = char]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1963:27:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, False) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TObject = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TObject = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:21:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1898:23: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1898 |             value(it) = nodeDesc;
      |             ~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyPush(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1897:25:   required from 'bool seqan::_goDownChar(Iter<TIndex, VSTree<TopDown<TSpec> > >&, TValue) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TValue = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1963:27:   required from 'bool seqan::_goDownObject(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&, False) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TObject = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1985:29:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&, const TObject&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = Preorder; TObject = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:21:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1751:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1751 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:26:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:26:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_iterator_assignment2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/link.txt --verbose=1
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o -o ../bin/demo_tutorial_index_iterators_iterator_assignment2  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 58%] Built target demo_tutorial_index_iterators_iterator_assignment2
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 59%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:453:21:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp:15:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDown(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = ParentLinks<>; TDfsOrder = Preorder_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = ParentLinks<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp:15:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1838:27: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1838 |             oldParentDesc = nodeUp(it);
      |             ~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp:10:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp:10:62:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp:14:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp:14:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 59%] Linking CXX executable ../bin/demo_tutorial_index_iterators_iterator_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o -o ../bin/demo_tutorial_index_iterators_iterator_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Built target demo_tutorial_index_iterators_iterator_solution2
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'bool seqan::_goDown(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<TopDown<TSpec> > >&, VSTreeIteratorTraits<TDfsOrder, True>) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = ParentLinks<>; TDfsOrder = Preorder_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1880:20:   required from 'bool seqan::goDown(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> >, IndexEsa<> >; TSpec = ParentLinks<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:19:20:   required from 'void constrainedDFS() [with TIndexSpec = seqan::IndexEsa<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:34:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1838:27: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1838 |             oldParentDesc = nodeUp(it);
      |             ~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<String<char, Alloc<> >, IndexEsa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1491:22:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:14:63:   required from 'void constrainedDFS() [with TIndexSpec = seqan::IndexEsa<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:34:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> >, IndexEsa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> >, IndexEsa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1492:14:   required from 'void seqan::goRoot(Iter<Index<TObject, TSpec>, VSTree<TSpec> >&) [with TText = String<char, Alloc<> >; TIndexSpec = IndexEsa<>; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexEsa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:14:63:   required from 'void constrainedDFS() [with TIndexSpec = seqan::IndexEsa<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:34:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:18:19:   required from 'void constrainedDFS() [with TIndexSpec = seqan::IndexEsa<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:34:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:18:19:   required from 'void constrainedDFS() [with TIndexSpec = seqan::IndexEsa<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp:34:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 59%] Linking CXX executable ../bin/demo_tutorial_index_iterators_iterator_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o -o ../bin/demo_tutorial_index_iterators_iterator_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Built target demo_tutorial_index_iterators_iterator_solution3
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Building CXX object demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o -MF CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/base.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 59%] Linking CXX executable ../bin/demo_tutorial_index_iterators_iterator_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o -o ../bin/demo_tutorial_index_iterators_iterator_solution1  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 59%] Built target demo_tutorial_index_iterators_iterator_solution1
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Building CXX object demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 59%] Linking CXX executable ../bin/demo_tutorial_indexed_fasta_io_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o -o ../bin/demo_tutorial_indexed_fasta_io_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Built target demo_tutorial_indexed_fasta_io_base
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Building CXX object demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 59%] Linking CXX executable ../bin/demo_tutorial_indexed_fasta_io_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o -o ../bin/demo_tutorial_indexed_fasta_io_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Built target demo_tutorial_indexed_fasta_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o -MF CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o.d -o CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 59%] Linking CXX executable ../bin/demo_tutorial_indexed_fasta_io_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o -o ../bin/demo_tutorial_indexed_fasta_io_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Built target demo_tutorial_indexed_fasta_io_solution2
make  -f demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o -MF CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o.d -o CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_2.cpp
[ 59%] Linking CXX executable ../bin/demo_tutorial_indices_assignment_1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indices_assignment_1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o -o ../bin/demo_tutorial_indices_assignment_1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Built target demo_tutorial_indices_assignment_1
make  -f demos/CMakeFiles/demo_tutorial_indices_base.dir/build.make demos/CMakeFiles/demo_tutorial_indices_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indices_base.dir/build.make demos/CMakeFiles/demo_tutorial_indices_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o -MF CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o.d -o CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >; TSource = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >; TValue2 = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >&; typename Haystack<TFinder>::Type = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:59:46:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [6]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [6]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_2.cpp:12:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::IndexEsa<> >& seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::IndexEsa<> >::operator=(const seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::IndexEsa<> >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::IndexEsa<> >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >; TSource = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >; TValue2 = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >&; typename Haystack<TFinder>::Type = Index<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, IndexEsa<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:59:46:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [5]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:61:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::IndexEsa<> >& seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::IndexEsa<> >::operator=(const seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::IndexEsa<> >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::IndexEsa<> >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:92:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:92:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:92:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:92:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:92:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<char, Alloc<> >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<char, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:92:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::External<seqan::ExternalConfigLarge<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:92:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 60%] Linking CXX executable ../bin/demo_tutorial_indices_assignment_2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indices_assignment_2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o -o ../bin/demo_tutorial_indices_assignment_2  -lrt -lz -lbz2
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 60%] Built target demo_tutorial_indices_assignment_2
make  -f demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/build.make demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/DependInfo.cmake "--color="
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, External<ExternalConfigLarge<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:92:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/build.make demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 60%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o -MF CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o.d -o CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<char, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:445:22:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSALF) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSALF = const Tag<FibreSALF_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm.h:463:23:   required from 'bool seqan::indexCreate(Index<TText, FMIndex<TSpec, TConfig> >&, FibreSA) [with TText = String<char, Alloc<> >; TSpec = void; TConfig = FMIndexConfig<void, long unsigned int, 1, 1>; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<char, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp:81:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/set:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:21:9:   required from 'main()::<lambda(auto:5&, const seqan::DnaString&, uint8_t)> [with auto:5 = seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >, seqan::VSTree<seqan::TopDown<> > >; seqan::DnaString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:509:17:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDir = Tag<BidirectionalRev_>; TDistanceTag = Tag<HammingDistance_>; uint32_t = unsigned int; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:556:25:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const OptimalSearch<nbrBlocks>&, const TDistanceTag&) [with TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:571:29:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const std::array<OptimalSearch<nbrBlocks>, N>&, const TDistanceTag&) [with TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; long unsigned int N = 3; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:592:25:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:497:15:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(T&) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:21:9:   required from 'main()::<lambda(auto:5&, const seqan::DnaString&, uint8_t)> [with auto:5 = seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >, seqan::VSTree<seqan::TopDown<> > >; seqan::DnaString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:509:17:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDir = Tag<BidirectionalRev_>; TDistanceTag = Tag<HammingDistance_>; uint32_t = unsigned int; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:556:25:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const OptimalSearch<nbrBlocks>&, const TDistanceTag&) [with TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:571:29:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const std::array<OptimalSearch<nbrBlocks>, N>&, const TDistanceTag&) [with TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; long unsigned int N = 3; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:592:25:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>; TIterator = seqan::Iter<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12:   required from 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:362:17:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(T&) [with T = Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, InfixSegment>, AdaptorIterator<Iter<const CompressedSA<String<SimpleType<unsigned char, Dna_>, Alloc<> >, void, FMIndexConfig<void, long unsigned int, 1, 1> >, CountingIteratorImpl_<Tag<Nothing_> > >, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:21:9:   required from 'main()::<lambda(auto:5&, const seqan::DnaString&, uint8_t)> [with auto:5 = seqan::Iter<seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >, seqan::VSTree<seqan::TopDown<> > >; seqan::DnaString = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:509:17:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, uint32_t, uint32_t, uint8_t, const OptimalSearch<nbrBlocks>&, uint8_t, const TDir&, const TDistanceTag&) [with TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDir = Tag<BidirectionalRev_>; TDistanceTag = Tag<HammingDistance_>; uint32_t = unsigned int; uint8_t = unsigned char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:556:25:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const OptimalSearch<nbrBlocks>&, const TDistanceTag&) [with TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:571:29:   required from 'void seqan::_optimalSearchScheme(TDelegate&, Iter<Index<TText, BidirectionalIndex<TIndex> >, VSTree<TopDown<TSpec> > >, const TNeedle&, const std::array<OptimalSearch<nbrBlocks>, N>&, const TDistanceTag&) [with TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndex = FMIndex<>; TIndexSpec = Preorder; TNeedle = String<SimpleType<unsigned char, Dna_>, Alloc<> >; long unsigned int nbrBlocks = 4; long unsigned int N = 3; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:592:25:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::CompressedSA<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, void, seqan::FMIndexConfig<void, long unsigned int, 1, 1> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const TObject&, TAlgSpec) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TObject = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:186:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const TText&, const TAlgSpec&, False) [with TSA = String<long unsigned int, External<ExternalConfigLarge<> > >; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:69:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = FMIndex<>; TFibre = FibreSALF_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_stree.h:183:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, FMIndex<TSpec, TConfig> >&) [with TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TOccSpec = void; TIndexSpec = FMIndexConfig<void, long unsigned int, 1, 1>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::FMIndex<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bidirectional_stree.h:80:9:   required from 'seqan::Iter<seqan::Index<TText, seqan::BidirectionalIndex<TIndexSpec> >, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TBiIndex&) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >; TIndexSpec = seqan::FMIndex<>; TSpec = seqan::Preorder; TBiIndex = seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::BidirectionalIndex<seqan::FMIndex<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find2_index_approx.h:591:78:   required from 'void seqan::find(TDelegate&, Index<TText, BidirectionalIndex<TIndexSpec> >&, const String<TChar, TStringSpec>&, const TDistanceTag&) [with long unsigned int minErrors = 0; long unsigned int maxErrors = 2; TDelegate = main()::<lambda(auto:5&, const DnaString&, uint8_t)>; TText = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TIndexSpec = FMIndex<>; TChar = SimpleType<unsigned char, Dna_>; TStringSpec = Alloc<>; TDistanceTag = Tag<HammingDistance_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/find2_index_approx.cpp:29:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:63:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AppendString_<TExpand>::append_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1238:31,
    inlined from 'void seqan::append(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1287:42,
    inlined from 'void seqan::append(TTarget&&, const TSource&) [with TTarget = String<char, Alloc<> >&; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:903:11,
    inlined from 'bool seqan::open(RankDictionary<TValue, Levels<TSpec, TConfig> >&, const char*, int) [with TValue = bool; TSpec = void; TConfig = WTRDConfig<long unsigned int, Alloc<>, 1, 1>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_fm_rank_dictionary_levels.h:1812:11,
    inlined from 'bool seqan::open(StringSet<TString, TSpec>&, const char*, int) [with TString = RankDictionary<bool, Levels<void, WTRDConfig<long unsigned int, Alloc<>, 1, 1> > >; TSSSpec = Owner<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:841:26:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 60%] Linking CXX executable ../bin/demo_tutorial_indices_find2_index_approx
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o -o ../bin/demo_tutorial_indices_find2_index_approx  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 60%] Built target demo_tutorial_indices_find2_index_approx
make  -f demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/build.make demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/build.make demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 60%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o -MF CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o.d -o CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/fm_index.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/fm_index.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/fm_index.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 60%] Linking CXX executable ../bin/demo_tutorial_indices_fm_index
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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o -o ../bin/demo_tutorial_indices_fm_index  -lrt -lz -lbz2
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make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 60%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 60%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o -o ../bin/demo_tutorial_iterators_assignment_1  -lrt -lz -lbz2
[ 60%] Linking CXX executable ../bin/demo_tutorial_indices_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indices_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o -o ../bin/demo_tutorial_indices_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 60%] Built target demo_tutorial_iterators_assignment_1
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 60%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1_solution.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 60%] Built target demo_tutorial_indices_base
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 60%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_2_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_2_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_2_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 61%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_2_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o -o ../bin/demo_tutorial_iterators_assignment_2_solution  -lrt -lz -lbz2
[ 61%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_1_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_iterators_assignment_1_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Built target demo_tutorial_iterators_assignment_2_solution
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/DependInfo.cmake "--color="
[ 61%] Built target demo_tutorial_iterators_assignment_1_solution
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop.cpp
[ 61%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 61%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_3_workshop_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o -o ../bin/demo_tutorial_iterators_assignment_3_workshop_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Built target demo_tutorial_iterators_assignment_3_workshop_solution
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_4_workshop_solution.cpp
[ 61%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_3_workshop
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o -o ../bin/demo_tutorial_iterators_assignment_3_workshop  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Built target demo_tutorial_iterators_assignment_3_workshop
make  -f demos/CMakeFiles/demo_tutorial_iterators_base.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_base.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o -MF CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_4_workshop_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_4_workshop_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 61%] Linking CXX executable ../bin/demo_tutorial_iterators_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o -o ../bin/demo_tutorial_iterators_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Built target demo_tutorial_iterators_base
make  -f demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o -MF CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/sequence_iterator_demo.cpp
[ 61%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_4_workshop_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o -o ../bin/demo_tutorial_iterators_assignment_4_workshop_solution  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/sequence_iterator_demo.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/sequence_iterator_demo.cpp:5:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 61%] Built target demo_tutorial_iterators_assignment_4_workshop_solution
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 61%] Linking CXX executable ../bin/demo_tutorial_iterators_sequence_iterator_demo
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o -o ../bin/demo_tutorial_iterators_sequence_iterator_demo  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 61%] Built target demo_tutorial_iterators_sequence_iterator_demo
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_join.cpp
[ 62%] Linking CXX executable ../bin/demo_tutorial_journaled_set_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o -o ../bin/demo_tutorial_journaled_set_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Built target demo_tutorial_journaled_set_base
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_journal_string_basic.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_join.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_join.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_journal_string_basic.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence_journaled/sequence_journaled.h:385:20:   required from 'TStream& seqan::operator<<(TStream&, const String<TValue, Journaled<THostSpec, TJournalSpec, TBufferSpec> >&) [with TStream = std::basic_ostream<char>; TValue = char; THostSpec = Alloc<>; TJournalSpec = SortedArray; TBufferSpec = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_journal_string_basic.cpp:22:33:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence_journaled/sequence_journaled.h:385:20:   required from 'TStream& seqan::operator<<(TStream&, const String<TValue, Journaled<THostSpec, TJournalSpec, TBufferSpec> >&) [with TStream = std::basic_ostream<char>; TValue = char; THostSpec = Alloc<>; TJournalSpec = SortedArray; TBufferSpec = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_journal_string_basic.cpp:22:33:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_join.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 62%] Linking CXX executable ../bin/demo_tutorial_journaled_set_example_journal_string_basic
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o -o ../bin/demo_tutorial_journaled_set_example_journal_string_basic  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Built target demo_tutorial_journaled_set_example_journal_string_basic
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence_journaled/sequence_journaled.h:385:20:   required from 'TStream& seqan::operator<<(TStream&, const String<TValue, Journaled<THostSpec, TJournalSpec, TBufferSpec> >&) [with TStream = std::basic_ostream<char>; TValue = char; THostSpec = Alloc<>; TJournalSpec = SortedArray; TBufferSpec = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_join.cpp:38:81:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence_journaled/sequence_journaled.h:385:20:   required from 'TStream& seqan::operator<<(TStream&, const String<TValue, Journaled<THostSpec, TJournalSpec, TBufferSpec> >&) [with TStream = std::basic_ostream<char>; TValue = char; THostSpec = Alloc<>; TJournalSpec = SortedArray; TBufferSpec = Alloc<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_join.cpp:38:81:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp:264:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp:264:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp:301:130:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::JournaledStringIterSpec<seqan::Tag<seqan::CommonSegmentIterator_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp:264:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp:264:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::JournaledStringIterSpec<seqan::Tag<seqan::CommonSegmentIterator_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp:301:130:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp:264:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 62%] Linking CXX executable ../bin/demo_tutorial_journaled_set_example_join
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_example_join.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o -o ../bin/demo_tutorial_journaled_set_example_join  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Built target demo_tutorial_journaled_set_example_join
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp:50:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp:50:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp:50:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp:50:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp:50:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 62%] Linking CXX executable ../bin/demo_tutorial_journaled_set_example_online_search
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o -o ../bin/demo_tutorial_journaled_set_example_online_search  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Built target demo_tutorial_journaled_set_example_online_search
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp
[ 62%] Linking CXX executable ../bin/demo_tutorial_journaled_set_example_online_search_assignment1_hint
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o -o ../bin/demo_tutorial_journaled_set_example_online_search_assignment1_hint  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Built target demo_tutorial_journaled_set_example_online_search_assignment1_hint
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp:52:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp:52:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp:52:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp:52:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp:52:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp:118:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp:118:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp:118:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp:118:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp:118:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 62%] Linking CXX executable ../bin/demo_tutorial_journaled_set_solution_online_search_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o -o ../bin/demo_tutorial_journaled_set_solution_online_search_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 62%] Built target demo_tutorial_journaled_set_solution_online_search_assignment1
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/demo_tutorial_journaled_set_solution_online_search_assignment2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o -o ../bin/demo_tutorial_journaled_set_solution_online_search_assignment2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Built target demo_tutorial_journaled_set_solution_online_search_assignment2
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp:177:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp:177:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp:216:130:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::JournaledStringIterSpec<seqan::Tag<seqan::CommonSegmentIterator_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp:177:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp:177:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::JournaledStringIterSpec<seqan::Tag<seqan::CommonSegmentIterator_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp:216:130:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp:177:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp:250:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp:250:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp:287:130:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::JournaledStringIterSpec<seqan::Tag<seqan::CommonSegmentIterator_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp:250:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp:250:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>; TIterator = seqan::Iter<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::JournaledStringIterSpec<seqan::Tag<seqan::CommonSegmentIterator_> > >; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>, AdaptorIterator<Iter<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, JournaledStringIterSpec<Tag<CommonSegmentIterator_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = SimpleType<unsigned char, Dna_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = String<SimpleType<unsigned char, Dna_>, Journaled<Alloc<>, SortedArray, Alloc<> > >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp:287:130:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp:250:54:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 63%] Linking CXX executable ../bin/demo_tutorial_journaled_set_solution_online_search_assignment3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o -o ../bin/demo_tutorial_journaled_set_solution_online_search_assignment3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Built target demo_tutorial_journaled_set_solution_online_search_assignment3
make  -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o -MF CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/demo_tutorial_journaled_set_solution_online_search_assignment4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o -o ../bin/demo_tutorial_journaled_set_solution_online_search_assignment4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Built target demo_tutorial_journaled_set_solution_online_search_assignment4
make  -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'seqan::DeltaMapEntry<TRefPos, TStorePos>::DeltaMapEntry(TDeltaPos, TDeltaRecord, const TCoverage&, seqan::DeltaEndType) [with TRefPos = long unsigned int; TStorePos = long unsigned int; TDeltaPos = long unsigned int; TDeltaRecord = seqan::Pair<long unsigned int, long unsigned int, seqan::BitPacked<2, 62> >; TCoverage = seqan::String<bool, seqan::Packed<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:530:17:   required from 'void seqan::impl::insert(seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >, TDeltaPos, const TDeltaValue&, const TCoverage&, const seqan::DeltaTypeDel&) [with TDeltaMap = seqan::DeltaMap<seqan::DefaultJstConfig<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = int; TCoverage = seqan::String<bool, seqan::Packed<> >; seqan::DeltaTypeDel = seqan::Tag<seqan::DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = int; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = int; TIds = std::vector<unsigned int>; TDeltaType = Tag<DeltaTypeDel_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:42:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:114:9: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  114 |         deltaCoverage(_coverage),
      |         ^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:77:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h: In instantiation of 'TSize seqan::impl::expandNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:869:36:   required from 'TSize seqan::impl::moveWindow(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:451:32:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = long unsigned int; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:290:16:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:60:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h:51:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   51 | class JstTraversalNode
      |       ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:830:18: note: synthesized method 'seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >::JstTraversalNode(const seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >&)' first required here
  830 |             auto child = *parentPtr;
      |                  ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::InsertValueToString_<TExpand>::insertValue_(T&, TPosition, TValue&) [with T = seqan::String<seqan::DeltaMapEntry<long unsigned int, long unsigned int>, seqan::Alloc<> >; TPosition = long int; TValue = const seqan::DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1410:54:   required from 'void seqan::insertValue(String<TValue, TSpec>&, TPosition, const TValue&, Tag<TUsage>) [with TTargetValue = DeltaMapEntry<long unsigned int, long unsigned int>; TTargetSpec = Alloc<>; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1010:16:   required from 'void seqan::insertValue(T&&, TPosition, TValue&&) [with T = String<DeltaMapEntry<long unsigned int, long unsigned int>, Alloc<> >&; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:529:16:   required from 'void seqan::impl::insert(seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >, TDeltaPos, const TDeltaValue&, const TCoverage&, const seqan::DeltaTypeDel&) [with TDeltaMap = seqan::DeltaMap<seqan::DefaultJstConfig<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = int; TCoverage = seqan::String<bool, seqan::Packed<> >; seqan::DeltaTypeDel = seqan::Tag<seqan::DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = int; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = int; TIds = std::vector<unsigned int>; TDeltaType = Tag<DeltaTypeDel_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:42:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1396:33: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(const seqan::DeltaMapEntry<long unsigned int, long unsigned int>&)' first required here
 1396 |         typename Value<T>::Type temp_copy = _value; //temp copy because resizeSpace could invalidate _value
      |                                 ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::impl::positionReference(const seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type = seqan::String<seqan::Pair<long unsigned int, long unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:390:39:   required from 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::position(const TraverserImpl<TJst, JstTraversalSpec<TSpec> >&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; typename Position<TraverserImpl<TJst, JstTraversalSpec<TSpec> > >::Type = String<Pair<long unsigned int, long unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:19:28:   required from 'void MatchPrinter<TTraverser>::operator()() [with TTraverser = seqan::TraverserImpl<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::JstTraversalSpec<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:263:17:   required from 'decltype (seqan::impl::run(extension._derived, traverser, TCxtPosition()).first) seqan::run(JstExtensionBase<TExtension, TCxtPosition>&, const TTraverser&, TDelegate&&) [with TExtension = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TCxtPosition = Tag<ContextRange_>; TTraverser = TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; decltype (impl::run(extension._derived, traverser, TCxtPosition()).first) = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:289:25:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:60:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:968:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  968 |     auto tmp = impl::baseNode(me).coverage;
      |          ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::impl::positionBranch(const seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type = seqan::String<seqan::Pair<long unsigned int, long unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:392:36:   required from 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::position(const TraverserImpl<TJst, JstTraversalSpec<TSpec> >&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; typename Position<TraverserImpl<TJst, JstTraversalSpec<TSpec> > >::Type = String<Pair<long unsigned int, long unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:19:28:   required from 'void MatchPrinter<TTraverser>::operator()() [with TTraverser = seqan::TraverserImpl<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::JstTraversalSpec<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:263:17:   required from 'decltype (seqan::impl::run(extension._derived, traverser, TCxtPosition()).first) seqan::run(JstExtensionBase<TExtension, TCxtPosition>&, const TTraverser&, TDelegate&&) [with TExtension = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TCxtPosition = Tag<ContextRange_>; TTraverser = TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; decltype (impl::run(extension._derived, traverser, TCxtPosition()).first) = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:289:25:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:60:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:999:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  999 |     auto tmp = impl::activeNode(me).coverage;
      |          ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h: In instantiation of 'void seqan::impl::create(seqan::JstBuffer_<TJournaledStringTree, TSpec>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = seqan::Tag<seqan::ForwardTraversal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:503:17:   required from 'bool seqan::create(JstBuffer_<TJournaledStringTree, TSpec>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<ForwardTraversal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:556:11:   required from 'void seqan::init(JstBuffer_<TJournaledStringTree, TSpec>&, TJst&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<ForwardTraversal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:902:9:   required from 'void seqan::impl::init(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TObserver&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:407:15:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:282:9:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:60:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:328:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  328 |             f.setIt = jSetSplitter[jobId];
      |             ~~~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'decltype (seqan::bitScanForward(node.coverage)) seqan::impl::selectProxy(const TTraverserNode&, const seqan::SelectValidProxy&) [with TTraverserNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; decltype (seqan::bitScanForward(node.coverage)) = long unsigned int; seqan::SelectValidProxy = seqan::Tag<seqan::SelectValidProxy_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:580:38:   required from 'bool seqan::impl::createBranch(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode&, TTraversalNode&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TProxySelection = seqan::SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:831:35:   required from 'TSize seqan::impl::expandNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:869:36:   required from 'TSize seqan::impl::moveWindow(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:451:32:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = long unsigned int; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:290:16:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:60:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:528:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  528 |     auto tmp1 = node.coverage;
      |          ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >*; TParam = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >*; TParam = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_block.h:402:19:   required from 'void seqan::appendValue(String<TValue, Block<SPACE> >&, TValue&&, Tag<TUsage>) [with TTargetValue = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; long unsigned int SPACE = 4096; TValue = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Block<> >&; TSource = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:175:16:   required from 'void seqan::impl::pushNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode&&, TObserver&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:926:19:   required from 'void seqan::impl::init(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TObserver&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Tag<seqan::Horspool_> > > >&>; TProxySelector = seqan::SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:407:15:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:282:9:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Tag<Horspool_> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Tag<Horspool_> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:60:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h:51:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   51 | class JstTraversalNode
      |       ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >::JstTraversalNode(seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = seqan::DeltaMapEntry<long unsigned int, long unsigned int>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource1 = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource2 = DeltaMapEntry<long unsigned int, long unsigned int>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   required from 'typename seqan::Size<seqan::String<TValue, TSpec> >::Type seqan::reserve(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = int; TExpand = TagGenerous_; typename Size<String<TValue, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1136:19:   required from 'typename seqan::Size<T>::Type seqan::reserve(T&&, TSize) [with T = String<DeltaMapEntry<long unsigned int, long unsigned int>, Alloc<> >&; TSize = int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:795:16:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = int; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = int; TIds = std::vector<unsigned int>; TDeltaType = Tag<DeltaTypeDel_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp:42:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(seqan::DeltaMapEntry<long unsigned int, long unsigned int>&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_set.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'seqan::DeltaMapEntry<TRefPos, TStorePos>::DeltaMapEntry(TDeltaPos, TDeltaRecord, const TCoverage&, seqan::DeltaEndType) [with TRefPos = long unsigned int; TStorePos = long unsigned int; TDeltaPos = long unsigned int; TDeltaRecord = seqan::Pair<long unsigned int, long unsigned int, seqan::BitPacked<2, 62> >; TCoverage = seqan::String<bool, seqan::Packed<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:530:17:   required from 'void seqan::impl::insert(seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >, TDeltaPos, const TDeltaValue&, const TCoverage&, const seqan::DeltaTypeDel&) [with TDeltaMap = seqan::DeltaMap<seqan::DefaultJstConfig<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = int; TCoverage = seqan::String<bool, seqan::Packed<> >; seqan::DeltaTypeDel = seqan::Tag<seqan::DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = int; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = int; TIds = std::vector<unsigned int>; TDeltaType = Tag<DeltaTypeDel_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:35:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:114:9: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  114 |         deltaCoverage(_coverage),
      |         ^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:77:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h: In instantiation of 'TSize seqan::impl::expandNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Myers<seqan::FindInfix, seqan::True, void> > > >&>; TProxySelector = seqan::Tag<seqan::SelectFirstProxy_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:869:36:   required from 'TSize seqan::impl::moveWindow(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Myers<seqan::FindInfix, seqan::True, void> > > >&>; TProxySelector = seqan::Tag<seqan::SelectFirstProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:451:32:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = long unsigned int; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>; TProxySelector = SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:290:16:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:49:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h:51:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   51 | class JstTraversalNode
      |       ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:830:18: note: synthesized method 'seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >::JstTraversalNode(const seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >&)' first required here
  830 |             auto child = *parentPtr;
      |                  ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::InsertValueToString_<TExpand>::insertValue_(T&, TPosition, TValue&) [with T = seqan::String<seqan::DeltaMapEntry<long unsigned int, long unsigned int>, seqan::Alloc<> >; TPosition = long int; TValue = const seqan::DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1410:54:   required from 'void seqan::insertValue(String<TValue, TSpec>&, TPosition, const TValue&, Tag<TUsage>) [with TTargetValue = DeltaMapEntry<long unsigned int, long unsigned int>; TTargetSpec = Alloc<>; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1010:16:   required from 'void seqan::insertValue(T&&, TPosition, TValue&&) [with T = String<DeltaMapEntry<long unsigned int, long unsigned int>, Alloc<> >&; TPosition = long int; TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:529:16:   required from 'void seqan::impl::insert(seqan::Iter<TDeltaMap, seqan::Tag<seqan::SpecDeltaMapIterator_> >, TDeltaPos, const TDeltaValue&, const TCoverage&, const seqan::DeltaTypeDel&) [with TDeltaMap = seqan::DeltaMap<seqan::DefaultJstConfig<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::Tag<seqan::Default_> >; TDeltaPos = int; TDeltaValue = int; TCoverage = seqan::String<bool, seqan::Packed<> >; seqan::DeltaTypeDel = seqan::Tag<seqan::DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:798:17:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = int; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = int; TIds = std::vector<unsigned int>; TDeltaType = Tag<DeltaTypeDel_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:35:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1396:33: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(const seqan::DeltaMapEntry<long unsigned int, long unsigned int>&)' first required here
 1396 |         typename Value<T>::Type temp_copy = _value; //temp copy because resizeSpace could invalidate _value
      |                                 ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::impl::positionReference(const seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type = seqan::String<seqan::Pair<long unsigned int, long unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:390:39:   required from 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::position(const TraverserImpl<TJst, JstTraversalSpec<TSpec> >&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; typename Position<TraverserImpl<TJst, JstTraversalSpec<TSpec> > >::Type = String<Pair<long unsigned int, long unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:16:28:   required from 'void MatchPrinter<TTraverser>::operator()() [with TTraverser = seqan::TraverserImpl<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::JstTraversalSpec<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:263:17:   required from 'decltype (seqan::impl::run(extension._derived, traverser, TCxtPosition()).first) seqan::run(JstExtensionBase<TExtension, TCxtPosition>&, const TTraverser&, TDelegate&&) [with TExtension = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCxtPosition = Tag<ContextEnd_>; TTraverser = TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; decltype (impl::run(extension._derived, traverser, TCxtPosition()).first) = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:289:25:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:49:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:968:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  968 |     auto tmp = impl::baseNode(me).coverage;
      |          ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::impl::positionBranch(const seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type = seqan::String<seqan::Pair<long unsigned int, long unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:392:36:   required from 'typename seqan::Position<seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> > >::Type seqan::position(const TraverserImpl<TJst, JstTraversalSpec<TSpec> >&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; typename Position<TraverserImpl<TJst, JstTraversalSpec<TSpec> > >::Type = String<Pair<long unsigned int, long unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:16:28:   required from 'void MatchPrinter<TTraverser>::operator()() [with TTraverser = seqan::TraverserImpl<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >, seqan::JstTraversalSpec<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:263:17:   required from 'decltype (seqan::impl::run(extension._derived, traverser, TCxtPosition()).first) seqan::run(JstExtensionBase<TExtension, TCxtPosition>&, const TTraverser&, TDelegate&&) [with TExtension = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TCxtPosition = Tag<ContextEnd_>; TTraverser = TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; decltype (impl::run(extension._derived, traverser, TCxtPosition()).first) = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:289:25:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:49:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:999:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  999 |     auto tmp = impl::activeNode(me).coverage;
      |          ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h: In instantiation of 'void seqan::impl::create(seqan::JstBuffer_<TJournaledStringTree, TSpec>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = seqan::Tag<seqan::ForwardTraversal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:503:17:   required from 'bool seqan::create(JstBuffer_<TJournaledStringTree, TSpec>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<ForwardTraversal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:556:11:   required from 'void seqan::init(JstBuffer_<TJournaledStringTree, TSpec>&, TJst&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<ForwardTraversal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:902:9:   required from 'void seqan::impl::init(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TObserver&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Myers<seqan::FindInfix, seqan::True, void> > > >&>; TProxySelector = seqan::SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:407:15:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>; TProxySelector = SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:282:9:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:49:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h:328:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  328 |             f.setIt = jSetSplitter[jobId];
      |             ~~~~~~~~^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Journaled<seqan::Alloc<>, seqan::SortedArray, seqan::Alloc<> > >, seqan::Owner<seqan::Tag<seqan::JournaledSet_> > >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >*; TParam = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >*; TParam = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_block.h:402:19:   required from 'void seqan::appendValue(String<TValue, Block<SPACE> >&, TValue&&, Tag<TUsage>) [with TTargetValue = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; long unsigned int SPACE = 4096; TValue = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Block<> >&; TSource = JstTraversalNode<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:175:16:   required from 'void seqan::impl::pushNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode&&, TObserver&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Myers<seqan::FindInfix, seqan::True, void> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:926:19:   required from 'void seqan::impl::init(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TObserver&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Myers<seqan::FindInfix, seqan::True, void> > > >&>; TProxySelector = seqan::SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:407:15:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>; TProxySelector = SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:282:9:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:49:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h:51:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   51 | class JstTraversalNode
      |       ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >::JstTraversalNode(seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = seqan::DeltaMapEntry<long unsigned int, long unsigned int>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = DeltaMapEntry<long unsigned int, long unsigned int>*; TParam = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource1 = DeltaMapEntry<long unsigned int, long unsigned int>*; TSource2 = DeltaMapEntry<long unsigned int, long unsigned int>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   required from 'typename seqan::Size<seqan::String<TValue, TSpec> >::Type seqan::reserve(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = DeltaMapEntry<long unsigned int, long unsigned int>; TSpec = Alloc<>; TSize_ = int; TExpand = TagGenerous_; typename Size<String<TValue, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1136:19:   required from 'typename seqan::Size<T>::Type seqan::reserve(T&&, TSize) [with T = String<DeltaMapEntry<long unsigned int, long unsigned int>, Alloc<> >&; TSize = int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map.h:795:16:   required from 'void seqan::insert(DeltaMap<TConfig, TSpec>&, TDeltaPos, const TDeltaValue&, const TCoverage&, const TDeltaType&) [with TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TDeltaPos = int; TDeltaValue = int; TCoverage = String<bool, Packed<> >; TDeltaType = Tag<DeltaTypeDel_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_impl.h:619:11:   required from 'typename seqan::EnableIf<seqan::Is<seqan::ContainerConcept<TIds> >, void>::Type seqan::insert(JournaledStringTree<TSequence, TConfig, TSpec>&, TPos, const TValue&, const TIds&, TDeltaType) [with TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TConfig = DefaultJstConfig<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = Tag<Default_>; TPos = int; TValue = int; TIds = std::vector<unsigned int>; TDeltaType = Tag<DeltaTypeDel_>; typename EnableIf<Is<ContainerConcept<TIds> >, void>::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:35:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/delta_map_entry.h:86:7: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
   86 | class DeltaMapEntry
      |       ^~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'seqan::DeltaMapEntry<long unsigned int, long unsigned int>::DeltaMapEntry(seqan::DeltaMapEntry<long unsigned int, long unsigned int>&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h: In instantiation of 'decltype (seqan::bitScanForward(node.coverage)) seqan::impl::selectProxy(const TTraverserNode&, const seqan::SelectValidProxy&) [with TTraverserNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; decltype (seqan::bitScanForward(node.coverage)) = long unsigned int; seqan::SelectValidProxy = seqan::Tag<seqan::SelectValidProxy_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:580:38:   required from 'bool seqan::impl::createBranch(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode&, TTraversalNode&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TProxySelection = seqan::SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:831:35:   required from 'TSize seqan::impl::expandNode(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Myers<seqan::FindInfix, seqan::True, void> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:869:36:   required from 'TSize seqan::impl::moveWindow(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TTraversalNode*, TSize, TObserver&, const TProxySelector&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TTraversalNode = seqan::JstTraversalNode<seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Myers<seqan::FindInfix, seqan::True, void> > > >&>; TProxySelector = seqan::Tag<seqan::SelectValidProxy_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:934:25:   required from 'void seqan::impl::init(seqan::TraverserImpl<TJst, seqan::JstTraversalSpec<TSpec> >&, TObserver&, const seqan::Tag<TUsage>&) [with TJst = seqan::JournaledStringTree<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > >; TSpec = void; TObserver = std::tuple<seqan::StackObserver<seqan::JstExtension<seqan::Pattern<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Myers<seqan::FindInfix, seqan::True, void> > > >&>; TProxySelector = seqan::SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:407:15:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>; TProxySelector = SelectValidProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:417:9:   required from 'void seqan::init(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TObserver&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h:437:13:   required from 'void seqan::advance(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TSize, TObserver&, const Tag<TUsage>&) [with TJst = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TSize = long unsigned int; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>; TProxySelector = SelectFirstProxy_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:290:16:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&, TObserver&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&; TObserver = std::tuple<StackObserver<JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<void> >, Myers<FindInfix, True, void> > > >&>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/jst_extension_base.h:306:13:   required from 'void seqan::find(TraverserImpl<TJst, JstTraversalSpec<TSpec> >&, TAlgorithm&, TDelegate&&) [with TContainer = JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void; TAlgorithm = JstExtension<Pattern<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Myers<FindInfix, True, void> > >; TDelegate = MatchPrinter<TraverserImpl<JournaledStringTree<String<SimpleType<unsigned char, Dna_>, Alloc<> > >, JstTraversalSpec<void> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp:49:9:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h:528:10: warning: implicitly-declared 'seqan::String<bool, seqan::Packed<> >::String(const seqan::String<bool, seqan::Packed<> >&)' is deprecated [-Wdeprecated-copy]
  528 |     auto tmp1 = node.coverage;
      |          ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_packed.h:163:14: note: because 'seqan::String<bool, seqan::Packed<> >' has user-provided 'seqan::String<TValue, seqan::Packed<THostspec> >& seqan::String<TValue, seqan::Packed<THostspec> >::operator=(const seqan::String<TValue, seqan::Packed<THostspec> >&) [with TValue = bool; THostspec = seqan::Alloc<>]'
  163 |     String & operator =(String const & source)
      |              ^~~~~~~~
[ 63%] Linking CXX executable ../bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o -o ../bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Built target demo_tutorial_journaled_string_tree_journaled_string_tree_base
make  -f demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o -MF CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/metafunctions/assignment1_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/metafunctions/assignment1_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/metafunctions/assignment1_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 63%] Linking CXX executable ../bin/demo_tutorial_metafunctions_assignment1_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o -o ../bin/demo_tutorial_metafunctions_assignment1_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Built target demo_tutorial_metafunctions_assignment1_solution
make  -f demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/build.make demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/build.make demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o -MF CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o.d -o CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/metafunctions/base.cpp
[ 63%] Linking CXX executable ../bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o -o ../bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Built target demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1
make  -f demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/UNUSED_modcomplementdna.cpp
[ 63%] Linking CXX executable ../bin/demo_tutorial_metafunctions_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_metafunctions_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o -o ../bin/demo_tutorial_metafunctions_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Built target demo_tutorial_metafunctions_base
make  -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/UNUSED_modcomplementdna.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/UNUSED_modcomplementdna.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 64%] Linking CXX executable ../bin/demo_tutorial_modifiers_UNUSED_modcomplementdna
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o -o ../bin/demo_tutorial_modifiers_UNUSED_modcomplementdna  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Built target demo_tutorial_modifiers_UNUSED_modcomplementdna
make  -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 64%] Linking CXX executable ../bin/demo_tutorial_modifiers_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o -o ../bin/demo_tutorial_modifiers_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Built target demo_tutorial_modifiers_assignment1
make  -f demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modreverse.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1_solution.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1_solution.cpp:8:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
    8 |     public std::unary_function<Dna, Dna>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 64%] Linking CXX executable ../bin/demo_tutorial_modifiers_assignment1_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o -o ../bin/demo_tutorial_modifiers_assignment1_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modreverse.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modreverse.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 64%] Built target demo_tutorial_modifiers_assignment1_solution
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make  -f demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modview.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 64%] Linking CXX executable ../bin/demo_tutorial_modifiers_modreverse
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_modreverse.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o -o ../bin/demo_tutorial_modifiers_modreverse  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Built target demo_tutorial_modifiers_modreverse
make  -f demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/nested.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modview.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modview.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modview.cpp:10:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   10 |     public std::unary_function<char, char>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 64%] Linking CXX executable ../bin/demo_tutorial_modifiers_modview
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_modview.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o -o ../bin/demo_tutorial_modifiers_modview  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Built target demo_tutorial_modifiers_modview
make  -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o -MF CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/assignment1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/nested.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/nested.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 64%] Linking CXX executable ../bin/demo_tutorial_modifiers_nested
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_nested.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o -o ../bin/demo_tutorial_modifiers_nested  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Built target demo_tutorial_modifiers_nested
make  -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o -MF CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o.d -o CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/consensus.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/assignment1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/assignment1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/consensus.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/consensus.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/assignment1.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h: In instantiation of 'bool seqan::convertAlignment(const Graph<Alignment<TStringSet, TCargo, TSpec> >&, Align<TAliSource, TAliSpec>&) [with TStringSet = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TSource = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec2 = Tag<ArrayGaps_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:579:21:   required from 'void seqan::globalMsaAlignment(Align<TSource, TSpec>&, const TScore&) [with TSource = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = Tag<ArrayGaps_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum80_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/assignment1.cpp:27:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:994:57: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  994 |         for(TSize i = 0; i<nseq; ++i) value(rowIter, i) = begin(row(align, i));
      |                                       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/consensus.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h: In instantiation of 'bool seqan::convertAlignment(const Graph<Alignment<TStringSet, TCargo, TSpec> >&, Align<TAliSource, TAliSpec>&) [with TStringSet = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TSource = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec2 = Tag<ArrayGaps_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:579:21:   required from 'void seqan::globalMsaAlignment(Align<TSource, TSpec>&, const TScore&) [with TSource = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/consensus.cpp:40:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:994:57: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  994 |         for(TSize i = 0; i<nseq; ++i) value(rowIter, i) = begin(row(align, i));
      |                                       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, long unsigned int, Tag<Default_> > >; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = long unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, long unsigned int, Tag<Default_> > >; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:136:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, FractionalScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = long unsigned int; TSpec = Tag<Default_>; FractionalScore = const Tag<FractionalScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:482:28:   required from 'void seqan::globalMsaAlignment(Graph<Alignment<TStringSet, TCargo, TSpec> >&, TStringSet1&, TNames&, const MsaOptions<TAlphabet, TScore>&) [with TStringSet = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TStringSet1 = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TNames = String<String<char, Alloc<> > >; TAlphabet = SimpleType<unsigned char, AminoAcid_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum80_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:568:23:   required from 'void seqan::globalMsaAlignment(Graph<Alignment<TStringSet, TCargo, TSpec> >&, const TScore&) [with TStringSet = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum80_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:578:23:   required from 'void seqan::globalMsaAlignment(Align<TSource, TSpec>&, const TScore&) [with TSource = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = Tag<ArrayGaps_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum80_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/assignment1.cpp:27:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, long unsigned int, Tag<Default_> > >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = long unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, long unsigned int, Tag<Default_> > >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:136:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, FractionalScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = long unsigned int; TSpec = Tag<Default_>; FractionalScore = const Tag<FractionalScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:482:28:   required from 'void seqan::globalMsaAlignment(Graph<Alignment<TStringSet, TCargo, TSpec> >&, TStringSet1&, TNames&, const MsaOptions<TAlphabet, TScore>&) [with TStringSet = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TStringSet1 = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TNames = String<String<char, Alloc<> > >; TAlphabet = SimpleType<unsigned char, AminoAcid_>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:568:23:   required from 'void seqan::globalMsaAlignment(Graph<Alignment<TStringSet, TCargo, TSpec> >&, const TScore&) [with TStringSet = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:578:23:   required from 'void seqan::globalMsaAlignment(Align<TSource, TSpec>&, const TScore&) [with TSource = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/consensus.cpp:40:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(TFile&, String<TRightValue, TRightSpec>&, String<TSize2, TSpec2>&, const TNames&, TCoffeeLib) [with TFile = std::basic_ifstream<char>; TFragment = Fragment<>; TSpec = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TNames = String<String<char, Alloc<> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_io.h:209:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::read(TFile&, String<TRightValue, TRightSpec>&, String<TSize2, TSpec2>&, const TNames&, TCoffeeLib) [with TFile = std::basic_ifstream<char>; TFragment = Fragment<>; TSpec = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TNames = String<String<char, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(TFile&, String<TRightValue, TRightSpec>&, String<TSize2, TSpec2>&, const TNames&, TCoffeeLib) [with TFile = std::basic_ifstream<char>; TFragment = Fragment<>; TSpec = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TNames = String<String<char, Alloc<> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_io.h:209:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::read(TFile&, String<TRightValue, TRightSpec>&, String<TSize2, TSpec2>&, const TNames&, TCoffeeLib) [with TFile = std::basic_ifstream<char>; TFragment = Fragment<>; TSpec = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TNames = String<String<char, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 65%] Linking CXX executable ../bin/demo_tutorial_multiple_sequence_alignment_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o -o ../bin/demo_tutorial_multiple_sequence_alignment_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Built target demo_tutorial_multiple_sequence_alignment_assignment1
make  -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o -MF CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o.d -o CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/msa.cpp
[ 65%] Linking CXX executable ../bin/demo_tutorial_multiple_sequence_alignment_consensus
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o -o ../bin/demo_tutorial_multiple_sequence_alignment_consensus  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Built target demo_tutorial_multiple_sequence_alignment_consensus
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_banded.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/msa.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/msa.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/msa.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_banded.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_banded.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h: In instantiation of 'bool seqan::convertAlignment(const Graph<Alignment<TStringSet, TCargo, TSpec> >&, Align<TAliSource, TAliSpec>&) [with TStringSet = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TSource = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec2 = Tag<ArrayGaps_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:579:21:   required from 'void seqan::globalMsaAlignment(Align<TSource, TSpec>&, const TScore&) [with TSource = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = Tag<ArrayGaps_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/msa.cpp:31:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:994:57: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
  994 |         for(TSize i = 0; i<nseq; ++i) value(rowIter, i) = begin(row(align, i));
      |                                       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, long unsigned int, Tag<Default_> > >; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >; TScore = long unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, long unsigned int, Tag<Default_> > >; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSetSpec = Dependent<Tag<TagInsist_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:136:20:   required from 'void seqan::buildAlignmentGraph(String<TValue, TSpec>&, String<TAlphabetV, TSpecV>&, Graph<Alignment<TStringSet, TCargo, TSpec> >&, FractionalScore) [with TFragment = Fragment<>; TSpec1 = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TStringSet = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = long unsigned int; TSpec = Tag<Default_>; FractionalScore = const Tag<FractionalScore_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:482:28:   required from 'void seqan::globalMsaAlignment(Graph<Alignment<TStringSet, TCargo, TSpec> >&, TStringSet1&, TNames&, const MsaOptions<TAlphabet, TScore>&) [with TStringSet = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TStringSet1 = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TNames = String<String<char, Alloc<> > >; TAlphabet = SimpleType<unsigned char, AminoAcid_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:568:23:   required from 'void seqan::globalMsaAlignment(Graph<Alignment<TStringSet, TCargo, TSpec> >&, const TScore&) [with TStringSet = StringSet<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, Dependent<Tag<TagInsist_> > >; TCargo = void; TSpec = const Tag<WithoutEdgeId_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_msa.h:578:23:   required from 'void seqan::globalMsaAlignment(Align<TSource, TSpec>&, const TScore&) [with TSource = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = Tag<ArrayGaps_>; TScore = Score<int, ScoreMatrix<SimpleType<unsigned char, AminoAcid_>, Blosum62_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/msa.cpp:31:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
[ 65%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_banded
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_banded  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_banded
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 65%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::read(TFile&, String<TRightValue, TRightSpec>&, String<TSize2, TSpec2>&, const TNames&, TCoffeeLib) [with TFile = std::basic_ifstream<char>; TFragment = Fragment<>; TSpec = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TNames = String<String<char, Alloc<> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_io.h:209:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::read(TFile&, String<TRightValue, TRightSpec>&, String<TSize2, TSpec2>&, const TNames&, TCoffeeLib) [with TFile = std::basic_ifstream<char>; TFragment = Fragment<>; TSpec = Alloc<>; TScoreValue = int; TSpec2 = Alloc<>; TNames = String<String<char, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 65%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp
[ 65%] Linking CXX executable ../bin/demo_tutorial_multiple_sequence_alignment_msa
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o -o ../bin/demo_tutorial_multiple_sequence_alignment_msa  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 65%] Built target demo_tutorial_multiple_sequence_alignment_msa
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:183:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h: In instantiation of 'int seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const MyersHirschberg&) [with TSequenceH = String<SimpleType<unsigned char, Rna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Rna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:95:28:   required from 'int seqan::globalAlignment(Align<TSource, TSpec>&, const MyersHirschberg&) [with TSequence = String<SimpleType<unsigned char, Rna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; MyersHirschberg = Tag<MyersHirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp:26:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:348:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  348 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:368:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  368 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:370:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  370 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:398:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  398 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_myers_hirschberg_impl.h:423:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  423 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 66%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:177:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h: In instantiation of 'TScoreValue seqan::_globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const Hirschberg&) [with TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; Hirschberg = Tag<Hirschberg_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:72:28:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, Tag<Simple_> >&, const Hirschberg&) [with TSequenceH = String<char, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<char, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_specialized.h:83:27:   required from 'TScoreValue seqan::globalAlignment(Align<TSource, TSpec>&, const Score<TScoreValue, Tag<Simple_> >&, const Hirschberg&) [with TSequence = String<char, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TScoreValue = int; Hirschberg = Tag<Hirschberg_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp:22:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:468:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  468 |             finger1 = col_;
      |             ~~~~~~~~^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:487:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  487 |                 finger2 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:489:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  489 |                 finger1 = col_;
      |                 ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:518:21: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  518 |             finger1 = begin(matrix_);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_hirschberg_impl.h:543:25: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  543 |                     it_ = finger1;
      |                     ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
[ 66%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp
[ 66%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:189:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:16: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  714 |     best_begin = _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,(top(sw_finder.pQ)).id_), score_);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:748:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  748 |     next_best_begin= _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,next_best_end), score_);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:235:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  235 |     finger1 = col_;
      |     ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:253:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  253 |         finger2 = col_;        //points to last column
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:255:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  255 |         finger1 = col_;
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'typename seqan::Iterator<seqan::Matrix<TScoreValue, DIMENSION>, const seqan::Tag<seqan::Standard_> >::Type seqan::_smithWatermanTrace(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix&, Iter<Matrix<TScoreValue, DIMENSION>, CountingIteratorImpl_<Tag<Nothing_> > >, const Score<TScoreValue2, TScoreSpec>&) [with TSourceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; unsigned int DIMENSION = 0; typename Iterator<Matrix<TScoreValue, DIMENSION>, const Tag<Standard_> >::Type = Iter<Matrix<int>, CountingIteratorImpl_<Tag<Nothing_> > >; typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix = String<bool>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:37:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:595:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  595 |             it_ = source_;
      |             ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'void seqan::_smithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, TScoreSpec>&) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:736:26:   required from 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:445:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  445 |         finger1 = end_col;        //points to last column
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:447:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  447 |         finger0 = end_col;
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:220:22:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:37:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:216:33:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, Dna_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp:34:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
[ 66%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_standard
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp
[ 66%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_local
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_local  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_local
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:189:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:16: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  714 |     best_begin = _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,(top(sw_finder.pQ)).id_), score_);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:748:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  748 |     next_best_begin= _smithWatermanTrace(gapsH, gapsV, sw_finder.forbidden,iter(sw_finder.matrix,next_best_end), score_);
      |     ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:235:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  235 |     finger1 = col_;
      |     ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:253:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  253 |         finger2 = col_;        //points to last column
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:255:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  255 |         finger1 = col_;
      |         ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'typename seqan::Iterator<seqan::Matrix<TScoreValue, DIMENSION>, const seqan::Tag<seqan::Standard_> >::Type seqan::_smithWatermanTrace(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix&, Iter<Matrix<TScoreValue, DIMENSION>, CountingIteratorImpl_<Tag<Nothing_> > >, const Score<TScoreValue2, TScoreSpec>&) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; unsigned int DIMENSION = 0; typename Iterator<Matrix<TScoreValue, DIMENSION>, const Tag<Standard_> >::Type = Iter<Matrix<int>, CountingIteratorImpl_<Tag<Nothing_> > >; typename LocalAlignmentFinder<TScoreValue>::TBoolMatrix = String<bool>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:714:37:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:595:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  595 |             it_ = source_;
      |             ~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h: In instantiation of 'void seqan::_smithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue, TScoreSpec>&) [with TScoreValue = int; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreSpec = Tag<Simple_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:736:26:   required from 'TScoreValue seqan::_smithWatermanGetNext(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:107:37:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:445:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  445 |         finger1 = end_col;        //points to last column
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:447:17: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  447 |         finger0 = end_col;
      |         ~~~~~~~~^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:220:22:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:37:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, AminoAcid_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:215:44:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, AminoAcid_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:216:33:   required from 'TScoreValue seqan::_smithWatermanGetMatrix(LocalAlignmentFinder<TScoreValue>&, const TStringH&, const TStringV&, const Score<TValue, TSpec>&, TScoreValue) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TStringH = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>; TStringV = Segment<String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_waterman_eggert_impl.h:703:46:   required from 'TScoreValue seqan::_smithWaterman(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentFinder<TScoreValue>&, const Score<TScoreValue2, TScoreSpec>&, TScoreValue) [with TSourceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSourceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:105:30:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_unbanded.h:117:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Unbanded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = String<SimpleType<unsigned char, AminoAcid_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp:21:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::AminoAcid_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp:71:42: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
   71 |         itGapsPattern = begin(gapsPattern);
      |                                          ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp:72:36: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
   72 |         itGapsEnd = end(gapsPattern);
      |                                    ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
[ 66%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/link.txt --verbose=1
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5  -lrt -lz -lbz2
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp
[ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step1
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step2
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp
[ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step3
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp:66:42: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
   66 |         itGapsPattern = begin(gapsPattern);
      |                                          ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp:67:36: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
   67 |         itGapsEnd = end(gapsPattern);
      |                                    ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp:66:42: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
   66 |         itGapsPattern = begin(gapsPattern);
      |                                          ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp:67:36: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
   67 |         itGapsEnd = end(gapsPattern);
      |                                    ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
[ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step4
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step5
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step5  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 67%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step5
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment2_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp:66:42: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
   66 |         itGapsPattern = begin(gapsPattern);
      |                                          ^
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp:67:36: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >& seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::operator=(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&)' is deprecated [-Wdeprecated-copy]
   67 |         itGapsEnd = end(gapsPattern);
      |                                    ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_array.h:91:5: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >' has user-provided 'seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >::Iter(const seqan::Iter<TGaps, seqan::GapsIterator<seqan::Tag<seqan::ArrayGaps_> > >&) [with TGaps = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
   91 |     Iter(Iter const & other) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment2_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment2_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step6
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step6  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step6
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment3_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment3_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment3_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment2_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment2_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Built target demo_tutorial_parsing_command_line_arguments_assignment2_solution
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment4_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment4_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment4_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment3_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment3_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Built target demo_tutorial_parsing_command_line_arguments_assignment3_solution
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment5_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment5_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment5_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment4_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment4_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Built target demo_tutorial_parsing_command_line_arguments_assignment4_solution
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment6_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment6_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/assignment6_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment5_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment5_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Built target demo_tutorial_parsing_command_line_arguments_assignment5_solution
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/base.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/base.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Built target demo_tutorial_parsing_command_line_arguments_base
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment6_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment6_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Built target demo_tutorial_parsing_command_line_arguments_assignment6_solution
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example1_detailed.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example1_detailed.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example1_detailed.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example1
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_example1_detailed
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example1_detailed  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example1_detailed
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example_with_own_function.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example_with_own_function.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example_with_own_function.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_example_with_modifyString
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example_with_modifyString  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example_with_modifyString
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example_with_struct.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example_with_struct.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/example_with_struct.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_example_with_own_function
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example_with_own_function  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example_with_own_function
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/final_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/final_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/final_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_example_with_struct
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example_with_struct  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example_with_struct
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 69%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_final_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_final_solution  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_final_solution
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 69%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1_solution.cpp
[ 70%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Built target demo_tutorial_pattern_matching_assignment1
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1_solution.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 70%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Built target demo_tutorial_pattern_matching_assignment2
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2_solution.cpp
[ 70%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment1_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment1_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Built target demo_tutorial_pattern_matching_assignment1_solution
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2_solution.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 70%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment2_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment2_solution  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Built target demo_tutorial_pattern_matching_assignment2_solution
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/build
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; TSource = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; TValue2 = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> >; TSpecFinder = const Tag<FinderQGramLookup_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >&; typename Haystack<TFinder>::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:569:26:   required from 'typename seqan::InfixOnValue<T>::Type seqan::infix(Finder<THaystack, TSpec>&) [with THaystack = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; TSpec = const Tag<FinderQGramLookup_>; typename InfixOnValue<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3.cpp:18:98:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::String<char, seqan::Alloc<> >; TShapeSpec = seqan::UngappedShape<4>]'
  143 |         Index(Index const &other):
      |         ^~~~~
[ 70%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Built target demo_tutorial_pattern_matching_assignment3
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_approx.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3_solution.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_approx.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_approx.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; TSource = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; TValue2 = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> >; TSpecFinder = const Tag<FinderQGramLookup_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >&; typename Haystack<TFinder>::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:569:26:   required from 'typename seqan::InfixOnValue<T>::Type seqan::infix(Finder<THaystack, TSpec>&) [with THaystack = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<4>, Tag<OpenAddressing_> > >; TSpec = const Tag<FinderQGramLookup_>; typename InfixOnValue<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3_solution.cpp:13:98:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<4>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::String<char, seqan::Alloc<> >; TShapeSpec = seqan::UngappedShape<4>]'
  143 |         Index(Index const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 70%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment3_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment3_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Built target demo_tutorial_pattern_matching_assignment3_solution
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_exact.cpp
[ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_find_approx
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o -o ../bin/demo_tutorial_pattern_matching_find_approx  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Built target demo_tutorial_pattern_matching_find_approx
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_exact.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_exact.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> > >; TSource = Index<String<char, Alloc<> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> > >; TValue2 = Index<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<char, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<char, Alloc<> > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<char, Alloc<> > >&; typename Haystack<TFinder>::Type = Index<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:569:26:   required from 'typename seqan::InfixOnValue<T>::Type seqan::infix(Finder<THaystack, TSpec>&) [with THaystack = Index<String<char, Alloc<> > >; TSpec = const Tag<FinderMlr_>; typename InfixOnValue<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index.cpp:18:98:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> > >& seqan::Index<seqan::String<char, seqan::Alloc<> > >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> > >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::String<char, seqan::Alloc<> >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
[ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_find_exact
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o -o ../bin/demo_tutorial_pattern_matching_find_exact  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Built target demo_tutorial_pattern_matching_find_exact
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp
[ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_find_index
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o -o ../bin/demo_tutorial_pattern_matching_find_index  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Built target demo_tutorial_pattern_matching_find_index
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o -MF CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o.d -o CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment5.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment5.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment5.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, const TSource&) [with TTarget = Index<StringSet<String<char, Alloc<> > > >; TSource = Index<StringSet<String<char, Alloc<> > > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:889:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Index<StringSet<String<char, Alloc<> > > >; TSource = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; THostValue = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:89:39:   required from 'seqan::Finder<seqan::Index<TObject, TSpec>, TSpecFinder>::Finder(const TIndex&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::IndexEsa<>; TSpecFinder = const seqan::Tag<seqan::FinderMlr_>; TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:18:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:118:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy]
  118 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<char, Alloc<> > > >; TSource = Index<StringSet<String<char, Alloc<> > > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<char, Alloc<> > > >; TValue2 = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<char, Alloc<> > > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<char, Alloc<> > > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<StringSet<String<char, Alloc<> > > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<StringSet<String<char, Alloc<> > > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<StringSet<String<char, Alloc<> > > >&; typename Haystack<TFinder>::Type = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:569:26:   required from 'typename seqan::InfixOnValue<T>::Type seqan::infix(Finder<THaystack, TSpec>&) [with THaystack = Index<StringSet<String<char, Alloc<> > > >; TSpec = const Tag<FinderMlr_>; typename InfixOnValue<T>::Type = Segment<String<char, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:24:98:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 72%] Linking CXX executable ../bin/demo_tutorial_q_gram_index_index_assignment5
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o -o ../bin/demo_tutorial_q_gram_index_index_assignment5  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Built target demo_tutorial_q_gram_index_index_assignment5
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o -MF CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o.d -o CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment6.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment6.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment6.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment6.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 72%] Linking CXX executable ../bin/demo_tutorial_q_gram_index_index_assignment6
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o -o ../bin/demo_tutorial_q_gram_index_index_assignment6  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Built target demo_tutorial_q_gram_index_index_assignment6
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o -MF CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o.d -o CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 72%] Linking CXX executable ../bin/demo_tutorial_q_gram_index_index_qgram
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o -o ../bin/demo_tutorial_q_gram_index_index_qgram  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Built target demo_tutorial_q_gram_index_index_qgram
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o -MF CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o.d -o CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram_hash.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram_hash.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram_hash.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 73%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_find_index_multiple
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o -o ../bin/demo_tutorial_pattern_matching_find_index_multiple  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Built target demo_tutorial_pattern_matching_find_index_multiple
make  -f demos/CMakeFiles/demo_tutorial_realignment_step1.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step1.dir/depend
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o -MF CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o.d -o CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp
[ 73%] Linking CXX executable ../bin/demo_tutorial_q_gram_index_index_qgram_hash
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o -o ../bin/demo_tutorial_q_gram_index_index_qgram_hash  -lrt -lz -lbz2
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make  -f demos/CMakeFiles/demo_tutorial_realignment_step2.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_realignment_step2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_realignment_step2.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o -MF CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o.d -o CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:23:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:23:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:23:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:27:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:23:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:23:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h: In instantiation of 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:404:32: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  404 |             for (TReadGapsIter itR2 = itR; itR2 != itREnd; ++itR2)
      |                                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:27:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:27:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:27:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = int; TPos = int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:27:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Standard_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:395:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:504:15:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::end(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:280:33:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:408:48:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_subtractReadAlignment(unsigned int, unsigned int&, TProfileString&, seqan::ExtractProfileInfo_&, TAlignedReadElement, int, const seqan::WindowClippingInfo_&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1138:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = unsigned int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = unsigned int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:930:19:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::_endContig(unsigned int) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:697:5:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:369:17:   required from 'typename seqan::Iterator<const T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::begin(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:279:37:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_getReadAsProfile(TProfileString&, TAlignedReadElement&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1020:13:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:56:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = int; TCount = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:513:15:   required from 'void seqan::insertGap(Gaps<TSequence, TSpec>&, TPosition) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >; TPosition = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1610:30:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_updateAlignments(unsigned int, unsigned int&, TProfileString&, seqan::Gaps<seqan::String<seqan::ProfileChar<typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type> > >&, seqan::Gaps<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>&, seqan::ExtractProfileInfo_&, const seqan::WindowClippingInfo_&, const TAlignedReadIter&) [with TFragmentStore = seqan::FragmentStore<>; TProfileString = seqan::String<seqan::ProfileChar<seqan::SimpleType<unsigned char, seqan::Dna5_> >, seqan::Alloc<> >; typename seqan::BaseAlphabet<typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5_>; typename seqan::Value<typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type>::Type = seqan::SimpleType<unsigned char, seqan::Dna5Q_>; typename seqan::Value<typename TFragmentStore::TReadSeqStore>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; typename TFragmentStore::TReadSeqStore = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TAlignedReadIter = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1321:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:162:17:   required from 'typename seqan::Source<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:183:24:   required from 'typename seqan::GetValue<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = const Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:950:54:   required from 'void seqan::write(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_base.h:965:10:   required from 'TTarget& seqan::operator<<(TTarget&, const Gaps<TSource, TSpec>&) [with TTarget = std::basic_ostream<char>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = AnchorGaps<String<GapAnchor<long int>, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:363:40:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::_computeReadClippingInfo(seqan::WindowClippingInfo_&, const TAlignedReadElement&, unsigned int, unsigned int) [with TFragmentStore = seqan::FragmentStore<>; TAlignedReadElement = seqan::AlignedReadStoreElement<long int, seqan::GapAnchor<long int>, void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1067:9:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:427:10:   required from 'void seqan::assignSource(Gaps<TSequence, Tag<ArrayGaps_> >&, const TSequence2&) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSequence2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1163:21:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:18:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:639:20:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, const TAlgoTag&) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:382:27:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TDPCell = DPCell_<int, Tag<LinearGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = ConsensusScoreSequenceEntry<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> > >; TSeqVValue = ConsensusScoreSequenceEntry<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment> >; TSeqVIterator = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> >, Tag<LinearGaps_>, TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<False, True, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<False, True, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >; TSequenceV = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TScoreValue2 = int; TScoreSpec = WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > >; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOff_> >; TFreeEndGaps = FreeEndGaps_<False, True, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:639:20:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, const TAlgoTag&) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:657:36:   required from 'void seqan::_readToProfileAlignment(TProfileGaps&, TReadGaps&, const TConsensusScore&, const TAlignConfig&, int&, int&, bool) [with TProfileGaps = Gaps<String<ProfileChar<SimpleType<unsigned char, Dna5_> >, Alloc<> >, Tag<ArrayGaps_> >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ArrayGaps_> >; TConsensusScore = Score<int, WeightedConsensusScore<Score<int, Tag<ProfileSeqFracScore_> >, Score<int, Tag<ProfileSeqScore_> > > >; TAlignConfig = AlignConfig<false, true, false, true>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1209:36:   required from 'void seqan::AnsonMyersRealignmentRound_<TFragmentStore>::run(unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:685:18:   required from 'void seqan::AnsonMyersRealigner_<TFragmentStore>::run(unsigned int, unsigned int, unsigned int&) [with TFragmentStore = seqan::FragmentStore<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/realign/realign_base.h:1801:18:   required from 'void seqan::reAlignment(FragmentStore<TSpec, TConfig>&, unsigned int, unsigned int, unsigned int, bool, unsigned int, unsigned int, bool, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp:21:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 73%] Linking CXX executable ../bin/demo_tutorial_realignment_step1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_realignment_step1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o -o ../bin/demo_tutorial_realignment_step1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Built target demo_tutorial_realignment_step1
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/base.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/base.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 73%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Built target demo_tutorial_sam_and_bam_io_base
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 73%] Linking CXX executable ../bin/demo_tutorial_realignment_step2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_realignment_step2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o -o ../bin/demo_tutorial_realignment_step2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Built target demo_tutorial_realignment_step2
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example2.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 73%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_example1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Built target demo_tutorial_sam_and_bam_io_example1
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example7.cpp
[ 73%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_example2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_example2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Built target demo_tutorial_sam_and_bam_io_example2
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example7.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example7.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 74%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_example7
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_example7  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Built target demo_tutorial_sam_and_bam_io_example7
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution2.cpp
[ 74%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Built target demo_tutorial_sam_and_bam_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution2.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution3.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 74%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Built target demo_tutorial_sam_and_bam_io_solution2
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example1.cpp
[ 74%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Built target demo_tutorial_sam_and_bam_io_solution3
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example1.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example2.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 74%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example1  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Built target demo_tutorial_seed_and_extend_example1
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 74%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Built target demo_tutorial_seed_and_extend_example2
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example4.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example3.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example4.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example4.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example4.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example3.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 74%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Built target demo_tutorial_seed_and_extend_example4
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example5.cpp
[ 75%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example3  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example5.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 75%] Built target demo_tutorial_seed_and_extend_example3
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 75%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example6.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example5.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example6.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example6.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example6.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example5
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example5  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 75%] Built target demo_tutorial_seed_and_extend_example5
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 75%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example6
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example6  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 75%] Built target demo_tutorial_seed_and_extend_example6
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 75%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<> >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<>; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, Dna5_>; TSeqVValue = SimpleType<unsigned char, Dna5_>; TSeqVIterator = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<AffineGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, Dna5_>; TSeqVValue = SimpleType<unsigned char, Dna5_>; TSeqVIterator = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = false; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = false; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:245:32:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpec = Tag<Simple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp:30:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 75%] Built target demo_tutorial_seed_and_extend_solution1
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 75%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution2.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 75%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 75%] Built target demo_tutorial_seed_and_extend_solution2
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution3.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:55:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution3.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Built target demo_tutorial_seed_and_extend_solution3
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution4.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution4.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution4.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Built target demo_tutorial_seed_and_extend_solution4
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution5.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution5.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution5.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution5.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example7
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example7  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Built target demo_tutorial_seed_and_extend_example7
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/depend
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution5
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution5  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Built target demo_tutorial_seed_and_extend_solution5
make  -f demos/CMakeFiles/demo_tutorial_seeds_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seeds_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seeds_example1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seeds_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seeds_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o -MF CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o.d -o CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seeds/example1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seeds/example1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seeds/example1.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seeds/example1.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:930:38:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:509:41:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:510:37:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:381:19:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, TDPCell&, TDPCell&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, Dna5_>; TSeqVValue = SimpleType<unsigned char, Dna5_>; TSeqVIterator = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TDPCell = DPCell_<int, Tag<AffineGaps_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:453:18:   required from 'void seqan::_computeTrack(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSeqHValue&, const TSeqVValue&, const TSeqVIterator&, const TSeqVIterator&, const TScoringScheme&, const TColumnDescriptor&, const TDPProfile&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSeqHValue = SimpleType<unsigned char, Dna5_>; TSeqVValue = SimpleType<unsigned char, Dna5_>; TSeqVIterator = Iter<Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>, AdaptorIterator<const SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TScoringScheme = Score<int, Tag<Simple_> >; TColumnDescriptor = MetaColumnDescriptor<Tag<DPInitialColumn_>, Tag<FullColumn_> >; TDPProfile = DPProfile_<BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >, Tag<AffineGaps_>, TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >, Tag<Serial_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:515:18:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, SuffixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainFinalDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1336:38:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = const SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:526:58:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWise&) [with TDPScout = DPScout_<DPCell_<int, Tag<AffineGaps_> >, Tag<BandedChainAlignmentScout_> >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<AffineGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWise_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWise_> >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOff_> >; TAlignmentAlgo = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TGapCosts = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWise = Tag<NavigateColumnWise_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<AffineGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<AffineGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TGapScheme = Tag<AffineGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1264:29:   required from 'typename seqan::Value<TShape>::Type seqan::_computeAlignment(TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandFlag>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TGapScheme = Tag<AffineGaps_>; TTraceTarget = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSequenceH = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = Segment<const String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOff_>; TAlignmentAlgorithm = BandedChainAlignment_<FreeEndGaps_<True, False, True, False>, Tag<BandedChainInitialDPMatrix_> >; TTraceFlag = TracebackOn<TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:873:34:   required from 'typename seqan::Value<TShape>::Type seqan::_initializeBandedChain(TTraceSet&, TScoutState&, const TSeed&, unsigned int, const TSeqH&, const TSeqV&, const TScoreScheme&, const TScoreScheme&, const DPProfile_<BandedChainAlignment_<TSpec, TDPMatrixLocation>, TGapCosts, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TScoutState = DPScoutState_<BandedChainAlignmentScoutState<DPCell_<int, Tag<AffineGaps_> > > >; TSeed = Seed<Tag<Simple_> >; TSeqH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSeqV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGaps = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>; typename Value<TShape>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_impl.h:1319:47:   required from 'TScoreValue seqan::_computeAlignment(TTraceSet&, const TSeedSet&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, unsigned int, const DPProfile_<BandedChainAlignment_<TFreeEndGaps, TDPMatrixLocation>, TGapSpec, TracebackOn<TTracebackConfig>, TExecPolicy>&) [with TTraceSet = StringSet<String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >, Owner<> >; TSeedSet = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TDPMatrixLocation = Tag<BandedChainInnerDPMatrix_>; TGapSpec = Tag<AffineGaps_>; TTracebackConfig = TracebackConfig_<Tag<CompleteTrace_>, Tag<GapsLeft_> >; TExecPolicy = Tag<Serial_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment_profile.h:258:33:   required from 'TScoreValue seqan::_setupAndRunBandedChainAlignment(StringSet<String<TString>, TStringSetSpec>&, const TSeeds&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int, const TGapsPlacement&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TStringSetSpec = Owner<>; TSeeds = String<Seed<Tag<Simple_> > >; TSequenceH = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>; TGapsPlacement = Tag<GapsLeft_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds/banded_chain_alignment.h:201:41:   required from 'TScoreValue seqan::bandedChainAlignment(Align<TSource, TSpec>&, const TSeeds&, const Score<TScoreValue, TScoreSpec>&, const Score<TScoreValue, TScoreSpecGap>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, unsigned int) [with TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TAlignSpec = Tag<ArrayGaps_>; TSeeds = String<Seed<Tag<Simple_> > >; TScoreValue = int; TScoreSpecAnchor = Tag<Simple_>; TScoreSpecGap = Tag<Simple_>; bool TFirstRow = true; bool TFirstColumn = false; bool TLastColumn = false; bool TLastRow = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp:28:38:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/demo_tutorial_seeds_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seeds_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o -o ../bin/demo_tutorial_seeds_example1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Built target demo_tutorial_seeds_example1
make  -f demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o -MF CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seeds/solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seeds/solution1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seeds/solution1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 76%] Linking CXX executable ../bin/demo_tutorial_seeds_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seeds_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o -o ../bin/demo_tutorial_seeds_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 76%] Built target demo_tutorial_seeds_solution1
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/base.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/base.cpp:13:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/base.cpp:13:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/base.cpp:13:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/base.cpp:13:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/base.cpp:13:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 77%] Linking CXX executable ../bin/demo_tutorial_sequence_io_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o -o ../bin/demo_tutorial_sequence_io_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Built target demo_tutorial_sequence_io_base
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/example1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/example1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/example1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/example1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/example1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/example1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/example1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 77%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution6
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution6  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Built target demo_tutorial_seed_and_extend_solution6
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution1.cpp:11:47:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 77%] Linking CXX executable ../bin/demo_tutorial_sequence_io_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o -o ../bin/demo_tutorial_sequence_io_example1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Built target demo_tutorial_sequence_io_example1
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution2.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution2.cpp:12:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution2.cpp:12:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution2.cpp:12:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution2.cpp:12:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution2.cpp:12:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 77%] Linking CXX executable ../bin/demo_tutorial_sequence_io_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o -o ../bin/demo_tutorial_sequence_io_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Built target demo_tutorial_sequence_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution3.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution3.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution3.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution3.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution3.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution3.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 77%] Linking CXX executable ../bin/demo_tutorial_sequence_io_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o -o ../bin/demo_tutorial_sequence_io_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Built target demo_tutorial_sequence_io_solution2
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution4.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution4.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution4.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution4.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution4.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution4.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution4.cpp:10:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 77%] Linking CXX executable ../bin/demo_tutorial_sequence_io_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_solution3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o -o ../bin/demo_tutorial_sequence_io_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Built target demo_tutorial_sequence_io_solution3
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_1_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_1_solution.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_1_solution.cpp:5:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 78%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_1_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_1_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Built target demo_tutorial_sequences_assignment_1_solution
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_2_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_2_solution.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_2_solution.cpp:5:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 78%] Linking CXX executable ../bin/demo_tutorial_sequence_io_solution4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_solution4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o -o ../bin/demo_tutorial_sequence_io_solution4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Built target demo_tutorial_sequence_io_solution4
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_3.cpp
[ 78%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_2_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_2_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Built target demo_tutorial_sequences_assignment_2_solution
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_3_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_3.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_3_solution.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 78%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o -o ../bin/demo_tutorial_sequences_assignment_3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Built target demo_tutorial_sequences_assignment_3
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_4_solution.cpp
[ 78%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_3_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_3_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Built target demo_tutorial_sequences_assignment_3_solution
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_5_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_4_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_4_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_5_solution.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_5_solution.cpp:5:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 78%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_5_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_5_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Built target demo_tutorial_sequences_assignment_5_solution
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_6_solution.cpp
[ 78%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_4_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_4_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Built target demo_tutorial_sequences_assignment_4_solution
make  -f demos/CMakeFiles/demo_tutorial_sequences_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o -MF CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_6_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_6_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/base.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/base.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_6_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_6_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Built target demo_tutorial_sequences_assignment_6_solution
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_comparisons.cpp
[ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o -o ../bin/demo_tutorial_sequences_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Built target demo_tutorial_sequences_base
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_copy.cpp
[ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_example_comparisons
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o -o ../bin/demo_tutorial_sequences_example_comparisons  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Built target demo_tutorial_sequences_example_comparisons
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_move.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_copy.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_copy.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_move.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_move.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_example_conversions_copy
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o -o ../bin/demo_tutorial_sequences_example_conversions_copy  -lrt -lz -lbz2
[ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_example_conversions_move
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o -o ../bin/demo_tutorial_sequences_example_conversions_move  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Built target demo_tutorial_sequences_example_conversions_copy
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality1.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Built target demo_tutorial_sequences_example_conversions_move
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_example_functionality2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o -o ../bin/demo_tutorial_sequences_example_functionality2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_sequences_example_functionality2
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_segments.cpp
[ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_example_functionality1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o -o ../bin/demo_tutorial_sequences_example_functionality1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_sequences_example_functionality1
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_segments.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o -o ../bin/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution  -lrt -lz -lbz2
[ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_example_segments
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_segments.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o -o ../bin/demo_tutorial_sequences_example_segments  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_sequences_in_depth_assignment_exact_generous_solution
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_sequences_example_segments
[ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o -MF CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/base.cpp
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o -MF CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/example_overflow.cpp
[ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_in_depth_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o -o ../bin/demo_tutorial_sequences_in_depth_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_sequences_in_depth_base
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/example_overflow.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:46:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_in_depth_example_overflow
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o -o ../bin/demo_tutorial_sequences_in_depth_example_overflow  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_sequences_in_depth_example_overflow
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/base.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 80%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_simple_rna_seq_base
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp
[ 81%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_assignment1
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp:36:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp:36:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp:36:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp:36:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 81%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_assignment3
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp
[ 81%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_assignment2
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp:39:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp:39:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TCargo>&, const Graph<TSpec>&, const TPropertyMap&, TVertexDescriptor&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<long int, unsigned int>, StorePointsOnly>, Alloc<> >; TVertexDescriptor = unsigned int; TValue = long int; TCargo = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1532:18:   required from 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<long int, unsigned int>, StorePointsOnly>, Alloc<> >; TValue = long int; TCargo = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1513:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2, TValue2) [with TValue = long int; TCargo = unsigned int; TValue2 = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp:113:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1562:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1562 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1575:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1575 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1598:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1598 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp:40:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp:40:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp:34:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp:34:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp:34:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp:35:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp:35:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp:35:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 81%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment5
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment5  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_assignment5
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp
[ 81%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_assignment4
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp:30:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp:30:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp:25:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp:25:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp:25:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp:33:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp:33:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp:28:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp:28:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp:28:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 81%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_solution1
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp
[ 82%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Built target demo_tutorial_simple_rna_seq_genequant_solution2
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp:34:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp:34:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp:29:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp:29:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp:29:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TCargo>&, const Graph<TSpec>&, const TPropertyMap&, TVertexDescriptor&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<long int, unsigned int>, StorePointsOnly>, Alloc<> >; TVertexDescriptor = unsigned int; TValue = long int; TCargo = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1532:18:   required from 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<long int, unsigned int>, StorePointsOnly>, Alloc<> >; TValue = long int; TCargo = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1513:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2, TValue2) [with TValue = long int; TCargo = unsigned int; TValue2 = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp:110:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1562:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1562 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1575:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1575 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1598:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1598 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp:36:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp:36:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 82%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Built target demo_tutorial_simple_rna_seq_genequant_solution3
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp
[ 82%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Built target demo_tutorial_simple_rna_seq_genequant_solution4
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/interval_tree.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/interval_tree.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/interval_tree.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h: In instantiation of 'seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> > seqan::nodeDown(const Iter<TFragmentStore, AnnotationTree<TSpec> >&) [with TFragmentStore = const FragmentStore<>; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp:146:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:853:50: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::FragmentStore<>, seqan::AnnotationTree<> >::Iter(const seqan::Iter<const seqan::FragmentStore<>, seqan::AnnotationTree<> >&)' is deprecated [-Wdeprecated-copy]
  853 |     Iter<TFragmentStore, AnnotationTree<TSpec> > tmp(it);
      |                                                  ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:272:5: note: because 'seqan::Iter<const seqan::FragmentStore<>, seqan::AnnotationTree<> >' has user-provided 'const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >& seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >::operator=(const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >&) [with TFragmentStore = const seqan::FragmentStore<>; TSpec = void]'
  272 |     operator = (Iter const &_origin)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:855:12: warning: implicitly-declared 'constexpr seqan::Iter<const seqan::FragmentStore<>, seqan::AnnotationTree<> >::Iter(const seqan::Iter<const seqan::FragmentStore<>, seqan::AnnotationTree<> >&)' is deprecated [-Wdeprecated-copy]
  855 |     return tmp;
      |            ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:272:5: note: because 'seqan::Iter<const seqan::FragmentStore<>, seqan::AnnotationTree<> >' has user-provided 'const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >& seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >::operator=(const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >&) [with TFragmentStore = const seqan::FragmentStore<>; TSpec = void]'
  272 |     operator = (Iter const &_origin)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TCargo>&, const Graph<TSpec>&, const TPropertyMap&, TVertexDescriptor&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<long int, unsigned int>, StorePointsOnly>, Alloc<> >; TVertexDescriptor = unsigned int; TValue = long int; TCargo = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1532:18:   required from 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<long int, unsigned int>, StorePointsOnly>, Alloc<> >; TValue = long int; TCargo = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1513:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2, TValue2) [with TValue = long int; TCargo = unsigned int; TValue2 = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp:109:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1562:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1562 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1575:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1575 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1598:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1598 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp:36:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp:36:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::addInterval(TGraph&, TPropertyMap&, TInterval) [with TGraph = Graph<Directed<void, const Tag<WithoutEdgeId_> > >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, String<char, Alloc<> > >, StorePointsOnly>, Alloc<> >; TInterval = IntervalAndCargo<int, String<char, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1363:16:   required from 'void seqan::addInterval(IntervalTree<TValue, TCargo>&, TInterval) [with TValue = int; TCargo = String<char, Alloc<> >; TInterval = IntervalAndCargo<int, String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/interval_tree.cpp:42:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1286:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1286 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1299:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1299 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1329:31: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1329 |                     next_prop = property(pm, targetVertex(it));
      |                     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, String<char, Alloc<> > >, StorePointsOnly>, Alloc<> >; TValue = int; TCargo = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1502:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2) [with TValue = int; TCargo = String<char, Alloc<> >; TValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/interval_tree.cpp:58:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1441:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1441 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1453:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1453 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1475:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1475 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TCargo>&, const Graph<TSpec>&, const TPropertyMap&, TVertexDescriptor&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, String<char, Alloc<> > >, StorePointsOnly>, Alloc<> >; TVertexDescriptor = unsigned int; TValue = int; TCargo = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1532:18:   required from 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, String<char, Alloc<> > >, StorePointsOnly>, Alloc<> >; TValue = int; TCargo = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1513:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2, TValue2) [with TValue = int; TCargo = String<char, Alloc<> >; TValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/interval_tree.cpp:49:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1562:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1562 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1575:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1575 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1598:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1598 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'bool seqan::removeInterval(Graph<TSpec>&, TPropertyMap&, TVertexDescriptor&, TValue, TValue, TCargo) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, String<char, Alloc<> > >, StorePointsOnly>, Alloc<> >; TVertexDescriptor = unsigned int; TValue = int; TCargo = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1882:26:   required from 'bool seqan::removeInterval(Graph<TSpec>&, TPropertyMap&, TValue, TValue, TCargo) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, String<char, Alloc<> > >, StorePointsOnly>, Alloc<> >; TValue = int; TCargo = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1893:26:   required from 'bool seqan::removeInterval(IntervalTree<TValue, TCargo>&, TValue, TValue, TCargo) [with TValue = int; TCargo = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/interval_tree.cpp:66:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1779:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1779 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1786:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1786 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1802:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1802 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::String<char, seqan::Alloc<> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp:31:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 82%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_interval_tree
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_interval_tree  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Built target demo_tutorial_simple_rna_seq_interval_tree
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_1_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_1_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_1_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 82%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_1_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_1_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Built target demo_tutorial_string_sets_assignment_1_solution
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 82%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Built target demo_tutorial_string_sets_assignment_2
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 82%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2_solution.cpp
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 83%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_2_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_2_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Built target demo_tutorial_string_sets_assignment_2_solution
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_3_workshop_solution.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_3_workshop_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_3_workshop_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 83%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution5
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution5  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Built target demo_tutorial_simple_rna_seq_genequant_solution5
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_4_workshop_solution.cpp
[ 83%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_3_workshop_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_3_workshop_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Built target demo_tutorial_string_sets_assignment_3_workshop_solution
make  -f demos/CMakeFiles/demo_tutorial_string_sets_base.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_string_sets_base.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/base.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_4_workshop_solution.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_4_workshop_solution.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 83%] Linking CXX executable ../bin/demo_tutorial_string_sets_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o -o ../bin/demo_tutorial_string_sets_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Built target demo_tutorial_string_sets_base
make  -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 83%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_4_workshop_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_4_workshop_solution  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Built target demo_tutorial_string_sets_assignment_4_workshop_solution
make  -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality_2.cpp
[ 83%] Linking CXX executable ../bin/demo_tutorial_string_sets_example_functionality
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o -o ../bin/demo_tutorial_string_sets_example_functionality  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Built target demo_tutorial_string_sets_example_functionality
make  -f demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 83%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_iterators.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality_2.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality_2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_iterators.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_iterators.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 83%] Linking CXX executable ../bin/demo_tutorial_string_sets_example_functionality_2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o -o ../bin/demo_tutorial_string_sets_example_functionality_2  -lrt -lz -lbz2
[ 84%] Linking CXX executable ../bin/demo_tutorial_string_sets_example_iterators
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o -o ../bin/demo_tutorial_string_sets_example_iterators  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Built target demo_tutorial_string_sets_example_functionality_2
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/base.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Built target demo_tutorial_string_sets_example_iterators
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/example1.cpp
[ 84%] Linking CXX executable ../bin/demo_tutorial_vcf_io_base
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_base.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o -o ../bin/demo_tutorial_vcf_io_base  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Built target demo_tutorial_vcf_io_base
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/example1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/example1.cpp:8:84:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/example1.cpp:8:84:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution1.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution1.cpp:8:84:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution1.cpp:8:84:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(VcfRecord&, VcfIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Vcf&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io/read_vcf.h:192:43,
    inlined from 'void seqan::readRecord(VcfRecord&, FormattedFile<Tag<Vcf_>, Tag<Input_>, TSpec>&) [with TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io/vcf_file.h:209:15,
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/example1.cpp:23:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 84%] Linking CXX executable ../bin/demo_tutorial_vcf_io_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o -o ../bin/demo_tutorial_vcf_io_example1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Built target demo_tutorial_vcf_io_example1
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(VcfRecord&, VcfIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Vcf&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io/read_vcf.h:192:43,
    inlined from 'void seqan::readRecord(VcfRecord&, FormattedFile<Tag<Vcf_>, Tag<Input_>, TSpec>&) [with TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io/vcf_file.h:209:15,
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution1.cpp:23:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution2.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 84%] Linking CXX executable ../bin/demo_tutorial_vcf_io_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o -o ../bin/demo_tutorial_vcf_io_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Built target demo_tutorial_vcf_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution3.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution2.cpp:10:88:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution2.cpp:10:88:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution3.cpp:1:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(VcfRecord&, VcfIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Vcf&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_>, std::char_traits<char> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io/read_vcf.h:192:43,
    inlined from 'void seqan::readRecord(VcfRecord&, FormattedFile<Tag<Vcf_>, Tag<Input_>, TSpec>&) [with TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/vcf_io/vcf_file.h:209:15,
    inlined from 'int main()' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution2.cpp:25:23:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main()':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 84%] Linking CXX executable ../bin/demo_tutorial_vcf_io_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o -o ../bin/demo_tutorial_vcf_io_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Built target demo_tutorial_vcf_io_solution2
make  -f demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build.make demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build.make demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o -MF CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o.d -o CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/workflows/knime_node.cpp
[ 84%] Linking CXX executable ../bin/demo_tutorial_vcf_io_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_solution3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o -o ../bin/demo_tutorial_vcf_io_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Built target demo_tutorial_vcf_io_solution3
make  -f demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/alphabet.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/workflows/knime_node.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/workflows/knime_node.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 86%] Linking CXX executable ../bin/demo_unassigned_or_unused_alphabet
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_alphabet.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o -o ../bin/demo_unassigned_or_unused_alphabet  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Built target demo_unassigned_or_unused_alphabet
make  -f demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/annotation_converter.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/annotation_converter.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/annotation_converter.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/workflows/knime_node.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/workflows/knime_node.cpp:139:49:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/workflows/knime_node.cpp:139:49:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/workflows/knime_node.cpp:139:49:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/workflows/knime_node.cpp:157:52:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/workflows/knime_node.cpp:139:49:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/annotation_converter.cpp:37:43:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Ucsc_<UcscKnownGene_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Ucsc_<> >; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Ucsc_<> >; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/annotation_converter.cpp:43:45:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/annotation_converter.cpp:37:43:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Ucsc_<UcscKnownIsoforms_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownIsoforms_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Ucsc_<> >; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Ucsc_<> >; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/annotation_converter.cpp:43:45:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, SuffixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, SuffixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_io.h:355:10:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const UcscKnownIsoforms&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; UcscKnownIsoforms = Tag<Ucsc_<UcscKnownIsoforms_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_file.h:168:20:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const TagSelector<TSubList>&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TTagList = TagList<Tag<Ucsc_<UcscKnownIsoforms_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_file.h:170:20:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const TagSelector<TSubList>&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_ucsc.h:295:24:   required from 'void seqan::writeRecords(FormattedFile<Tag<Ucsc_<> >, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, const TFormat&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFormat = TagSelector<TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_ucsc.h:303:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Ucsc_<> >, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/annotation_converter.cpp:63:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = SuffixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, SuffixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, SuffixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, SuffixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, SuffixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, SuffixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, SuffixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_io.h:355:10:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const UcscKnownIsoforms&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; UcscKnownIsoforms = Tag<Ucsc_<UcscKnownIsoforms_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_file.h:168:20:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const TagSelector<TSubList>&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TTagList = TagList<Tag<Ucsc_<UcscKnownIsoforms_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/ucsc_io/ucsc_file.h:170:20:   required from 'void seqan::writeRecord(TTarget&, const UcscRecord&, const TagSelector<TSubList>&) [with TTarget = Iter<VirtualStream<char, Tag<Output_>, std::char_traits<char> >, StreamIterator<Tag<Output_> > >; TTagList = TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_ucsc.h:295:24:   required from 'void seqan::writeRecords(FormattedFile<Tag<Ucsc_<> >, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, const TFormat&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFormat = TagSelector<TagList<Tag<Ucsc_<UcscKnownGene_> >, TagList<Tag<Ucsc_<UcscKnownIsoforms_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_ucsc.h:303:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Ucsc_<> >, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/annotation_converter.cpp:63:21:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_suffix.h:129:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::SuffixSegment>' has user-provided 'seqan::Segment<THost_, seqan::SuffixSegment>& seqan::Segment<THost_, seqan::SuffixSegment>::operator=(const seqan::Segment<THost_, seqan::SuffixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  129 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable ../bin/demo_tutorial_workflows_knime_node
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_workflows_knime_node.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o -o ../bin/demo_tutorial_workflows_knime_node  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Built target demo_tutorial_workflows_knime_node
make  -f demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/arg_align.cpp
[ 86%] Linking CXX executable ../bin/demo_unassigned_or_unused_annotation_converter
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o -o ../bin/demo_unassigned_or_unused_annotation_converter  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Built target demo_unassigned_or_unused_annotation_converter
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_library_size.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/arg_align.cpp:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/arg_align.cpp:24:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_library_size.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_library_size.cpp:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_library_size.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_library_size.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 86%] Linking CXX executable ../bin/demo_unassigned_or_unused_arg_align
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_arg_align.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o -o ../bin/demo_unassigned_or_unused_arg_align  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Built target demo_unassigned_or_unused_arg_align
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:76:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:76:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:76:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:76:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bam_print_alignments.cpp:76:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 86%] Linking CXX executable ../bin/demo_unassigned_or_unused_bam_library_size
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o -o ../bin/demo_unassigned_or_unused_bam_library_size  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Built target demo_unassigned_or_unused_bam_library_size
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bamutil.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bamutil.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bamutil.cpp:39:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bamutil.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bamutil.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/bamutil.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 86%] Linking CXX executable ../bin/demo_unassigned_or_unused_bam_print_alignments
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o -o ../bin/demo_unassigned_or_unused_bam_print_alignments  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Built target demo_unassigned_or_unused_bam_print_alignments
make  -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream.cpp:51:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream.cpp:50:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream.cpp:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream.cpp:280:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream.cpp:280:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream.cpp:280:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream.cpp:280:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream.cpp:280:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_bamutil
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_bamutil.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o -o ../bin/demo_unassigned_or_unused_bamutil  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Built target demo_unassigned_or_unused_bamutil
make  -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream_write.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream_write.cpp:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream_write.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/benchmark_stream_write.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_benchmark_stream
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o -o ../bin/demo_unassigned_or_unused_benchmark_stream  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Built target demo_unassigned_or_unused_benchmark_stream
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp:8:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_benchmark_stream_write
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o -o ../bin/demo_unassigned_or_unused_benchmark_stream_write  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Built target demo_unassigned_or_unused_benchmark_stream_write
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_readwrite.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp:32:33:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp:32:33:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp:32:33:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp:32:33:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_format.cpp:32:33:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_readwrite.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_readwrite.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_file_readwrite
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o -o ../bin/demo_unassigned_or_unused_file_readwrite  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Built target demo_unassigned_or_unused_file_readwrite
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_speed.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_speed.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/file_speed.cpp:4:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_file_speed
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_file_speed.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o -o ../bin/demo_unassigned_or_unused_file_speed  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Built target demo_unassigned_or_unused_file_speed
make  -f demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp
[ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_file_format
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_file_format.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o -o ../bin/demo_unassigned_or_unused_file_format  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Built target demo_unassigned_or_unused_file_format
make  -f demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/find_wild.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:18:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:13:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/find_wild.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/find_wild.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:80:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:74:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:17:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:98:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:811:66:   required from 'void seqan::_fillBamSeqAndQual(TSeq&, TQual&, const TRead&) [with TSeq = String<SimpleType<unsigned char, Iupac_>, Alloc<> >; TQual = String<char, Alloc<> >; TRead = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:31:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_find_wild
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_find_wild.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o -o ../bin/demo_unassigned_or_unused_find_wild  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:74:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 88%] Built target demo_unassigned_or_unused_find_wild
make  -f demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:24:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:572:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:80:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/gff2gtf.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:74:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:24:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:572:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:663:20:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::end(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:811:66:   required from 'void seqan::_fillBamSeqAndQual(TSeq&, TQual&, const TRead&) [with TSeq = String<SimpleType<unsigned char, Iupac_>, Alloc<> >; TQual = String<char, Alloc<> >; TRead = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:31:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:619:22:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::begin(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:812:64:   required from 'void seqan::_fillBamSeqAndQual(TSeq&, TQual&, const TRead&) [with TSeq = String<SimpleType<unsigned char, Iupac_>, Alloc<> >; TQual = String<char, Alloc<> >; TRead = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:31:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:74:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:79:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:74:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:79:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:79:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:56:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:357:37:   required from 'typename seqan::Convert<seqan::ModifiedAlphabet<THost, seqan::ModExpand<CHAR, TSpec> >, seqan::Proxy<TSpec2> >::Type seqan::convertImpl(Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, T>, const Proxy<TSpec2>&) [with THost = SimpleType<unsigned char, Dna5Q_>; char CHAR = '-'; TSpec = Tag<Default_>; T = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >; TSpec2 = IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > >; typename Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, Proxy<TSpec2> >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_conversion.h:149:23:   required from 'typename seqan::Convert<TTarget, TSource>::Type seqan::convert(const TSource&) [with TTarget = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >; TSource = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >; typename Convert<TTarget, TSource>::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:92:59:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:17:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:357:37:   required from 'typename seqan::Convert<seqan::ModifiedAlphabet<THost, seqan::ModExpand<CHAR, TSpec> >, seqan::Proxy<TSpec2> >::Type seqan::convertImpl(Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, T>, const Proxy<TSpec2>&) [with THost = SimpleType<unsigned char, Dna5Q_>; char CHAR = '-'; TSpec = Tag<Default_>; T = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >; TSpec2 = IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > >; typename Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, Proxy<TSpec2> >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_conversion.h:149:23:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/filter_sam.cpp:142:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/gff2gtf.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/gff2gtf.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/gff2gtf.cpp:20:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/gff2gtf.cpp:20:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28,
    inlined from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, GffFileIn&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_gff.h:351:30:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_gff2gtf
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o -o ../bin/demo_unassigned_or_unused_gff2gtf  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Built target demo_unassigned_or_unused_gff2gtf
make  -f demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/graph_hmm_silent.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_types.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/graph_hmm_silent.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/graph_hmm_silent.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_graph_hmm_silent
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o -o ../bin/demo_unassigned_or_unused_graph_hmm_silent  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Built target demo_unassigned_or_unused_graph_hmm_silent
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> > >; TSource = Index<String<char, Alloc<> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> > >; TValue2 = Index<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<char, Alloc<> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<char, Alloc<> > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<char, Alloc<> > >&; typename Haystack<TFinder>::Type = Index<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:59:46:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find.cpp:16:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> > >& seqan::Index<seqan::String<char, seqan::Alloc<> > >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> > >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::String<char, seqan::Alloc<> >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >; TSource = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >; TValue2 = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = String<char, Alloc<> >; TSpec = IndexQGram<UngappedShape<2> >; TSpecFinder = const Tag<FinderQGramLookup_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >&; typename Haystack<TFinder>::Type = Index<String<char, Alloc<> >, IndexQGram<UngappedShape<2> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_qgram.h:75:33:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, QGramFindLookup) [with TText = String<char, Alloc<> >; TSpec = IndexQGram<UngappedShape<2> >; TSpecFinder = const Tag<FinderQGramLookup_>; TPattern = char [3]; QGramFindLookup = const Tag<FinderQGramLookup_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = String<char, Alloc<> >; TSpec = IndexQGram<UngappedShape<2> >; TSpecFinder = const Tag<FinderQGramLookup_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find.cpp:28:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<2> > >& seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<2> > >::operator=(const seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<2> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::String<char, seqan::Alloc<> >, seqan::IndexQGram<seqan::UngappedShape<2> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::String<char, seqan::Alloc<> >; TShapeSpec = seqan::UngappedShape<2>; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_find
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_find.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o -o ../bin/demo_unassigned_or_unused_index_find  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Built target demo_unassigned_or_unused_index_find
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<char, Alloc<> > > >; TSource = Index<StringSet<String<char, Alloc<> > > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<char, Alloc<> > > >; TValue2 = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<char, Alloc<> > > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<char, Alloc<> > > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:115:21:   required from 'typename seqan::Parameter_<seqan::Index<TObject, TSpec> >::Type seqan::container(Finder<Index<TObject, TSpec>, TSpecFinder>&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; typename Parameter_<Index<TObject, TSpec> >::Type = Index<StringSet<String<char, Alloc<> > > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:904:21:   required from 'typename seqan::Parameter_<typename seqan::Haystack<TFinder>::Type>::Type seqan::haystack(TObject&) [with TObject = Finder<Index<StringSet<String<char, Alloc<> > > > >; typename Parameter_<typename Haystack<TFinder>::Type>::Type = Index<StringSet<String<char, Alloc<> > > >&; typename Haystack<TFinder>::Type = Index<StringSet<String<char, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:59:46:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >& seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:429:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >' has user-provided 'seqan::Index<TText, seqan::IndexEsa<TSpec> >::Index(const seqan::Index<TText, seqan::IndexEsa<TSpec> >&) [with TText = seqan::StringSet<seqan::String<char, seqan::Alloc<> > >; TSpec = void]'
  429 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_filter_sam
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o -o ../bin/demo_unassigned_or_unused_filter_sam  -lrt -lz -lbz2
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index_esa.h:60:21:   required from 'void seqan::_findFirstIndex(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&, FinderMlr) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]; FinderMlr = const Tag<FinderMlr_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_index.h:275:28:   required from 'bool seqan::find(Finder<Index<TObject, TSpec>, TSpecFinder>&, const TPattern&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecFinder = const Tag<FinderMlr_>; TPattern = char [3]]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_find_stringset.cpp:23:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Built target demo_unassigned_or_unused_filter_sam
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   required from 'void seqan::createSuffixArray(TSA&, const TText&, const TAlgSpec&) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TText = StringSet<String<char, Alloc<> > >; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:614:26:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, FibreSA, TSpecAlg) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TSpecAlg = Skew7; FibreSA = const Tag<FibreSA_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_lcp.cpp:23:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_find_stringset
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o -o ../bin/demo_unassigned_or_unused_index_find_stringset  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Built target demo_unassigned_or_unused_index_find_stringset
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<char, Alloc<> > > >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = StringSet<String<char, Alloc<> > >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:41:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:41:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<char, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<char, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<char, Alloc<> > > >, Source<> >, Caster<unsigned char, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<unsigned char, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<unsigned char, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<unsigned char, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<char, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<char, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_mums.cpp:22:60:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_lcp
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o -o ../bin/demo_unassigned_or_unused_index_lcp  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Built target demo_unassigned_or_unused_index_lcp
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_node_predicate.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_node_predicate.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_node_predicate.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_node_predicate.cpp:87:68:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_node_predicate.cpp:87:68:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_node_predicate
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o -o ../bin/demo_unassigned_or_unused_index_node_predicate  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Built target demo_unassigned_or_unused_index_node_predicate
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_qgram_counts.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_qgram_counts.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_qgram_counts.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_qgram_counts
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o -o ../bin/demo_unassigned_or_unused_index_qgram_counts  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Built target demo_unassigned_or_unused_index_qgram_counts
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_sufarray.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_sufarray.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_sufarray.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 89%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_mums
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_mums.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o -o ../bin/demo_unassigned_or_unused_index_mums  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 89%] Built target demo_unassigned_or_unused_index_mums
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 89%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_supermaxrepeats.cpp
[ 89%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_sufarray
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o -o ../bin/demo_unassigned_or_unused_index_sufarray  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 89%] Built target demo_unassigned_or_unused_index_sufarray
make  -f demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 89%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/iterator.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_supermaxrepeats.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_supermaxrepeats.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/iterator.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/iterator.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<String<char, Alloc<> > >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = String<char, Alloc<> >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs.h:121:33:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::SuperMaxRepeats> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::String<char, seqan::Alloc<> > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_supermaxrepeats.cpp:18:74:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_supermaxrepeats.cpp:33:63:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const String<char, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const String<char, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = const char*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12:   required from 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<const String<char, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<const String<char, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/iter_stream.h:515:17:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StreamConcept<TStream> >, typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type>::Type seqan::directionIterator(TContainer&, const TDirection&) [with TContainer = const Segment<const String<char, Alloc<> >, InfixSegment>; TDirection = Tag<Input_>; typename DisableIf<Is<StreamConcept<TStream> >, typename Iterator<TObject, const Tag<Rooted_> >::Type>::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<const String<char, Alloc<> >, InfixSegment>, AdaptorIterator<const char*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_stream.h:1085:87:   required from 'typename seqan::EnableIf<seqan::And<seqan::Not<seqan::IsContiguous<TContainer> >, seqan::And<seqan::Is<seqan::ContainerConcept<TContainer> >, seqan::Not<seqan::Is<seqan::ContainerConcept<typename seqan::Value<TIterator2>::Type> > > > >, void>::Type seqan::write(TTarget&, const TContainer&) [with TTarget = Iter<std::basic_ostream<char>, StreamIterator<Tag<Output_> > >; TContainer = Segment<const String<char, Alloc<> >, InfixSegment>; typename EnableIf<And<Not<IsContiguous<TContainer> >, And<Is<ContainerConcept<TContainer> >, Not<Is<ContainerConcept<typename Value<TIterator2>::Type> > > > >, void>::Type = void; typename Value<TIterator2>::Type = char]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:789:10:   required from 'TStream& seqan::operator<<(TStream&, const Segment<THost, TSpec>&) [with TStream = std::basic_ostream<char>; THost = const String<char, Alloc<> >; TSpec = InfixSegment]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/index_supermaxrepeats.cpp:33:63:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::String<char, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::String<char, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 89%] Linking CXX executable ../bin/demo_unassigned_or_unused_iterator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_iterator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o -o ../bin/demo_unassigned_or_unused_iterator  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 89%] Built target demo_unassigned_or_unused_iterator
make  -f demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 89%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:32:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 89%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_supermaxrepeats
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o -o ../bin/demo_unassigned_or_unused_index_supermaxrepeats  -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 89%] Built target demo_unassigned_or_unused_index_supermaxrepeats
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_modreverse.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_modreverse.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_modreverse.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_modifier_modreverse
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o -o ../bin/demo_unassigned_or_unused_modifier_modreverse  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Built target demo_unassigned_or_unused_modifier_modreverse
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_modview.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:76:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:76:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h: In instantiation of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:80:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  140 |             _host(std::forward<THost_>(host)),
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:76:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:98:7:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:811:66:   required from 'void seqan::_fillBamSeqAndQual(TSeq&, TQual&, const TRead&) [with TSeq = String<SimpleType<unsigned char, Iupac_>, Alloc<> >; TQual = String<char, Alloc<> >; TRead = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:31:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:76:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<void> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:740:41:   required from 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<UngappedShape<11>, Tag<OpenAddressing_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:91:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::UngappedShape<11>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::UngappedShape<11>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::UngappedShape<11>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::UngappedShape<11>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::UngappedShape<11>]'
  143 |         Index(Index const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:24:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:572:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TFunctor = seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> >; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:140:13:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(THost_&&, typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type*) [with THost_ = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&; THost = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::EnableIf<seqan::IsAnInnerHost<typename seqan::RemoveReference<T>::Type, typename seqan::RemoveReference<THost_>::Type> >::Type = void; typename seqan::RemoveReference<T>::Type = seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >; typename seqan::RemoveReference<THost_>::Type = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_shortcuts.h:340:12:   required from 'typename seqan::ReverseComplementString<const THost>::Type seqan::reverseComplementString(const THost&) [with THost = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename ReverseComplementString<const THost>::Type = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:80:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1261:14:   required from 'bool seqan::loadReads(FragmentStore<TSpec, TConfig>&, TFileName&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TFileName = char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:76:19:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:840:14:   required from 'void seqan::setValue(Holder<TValue, Tag<Tristate_> >&, const TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:254:13:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Tag<HammingSimple_>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_hamming_simple.h:89:16:   required from 'seqan::Pattern<TNeedle, seqan::Tag<seqan::HammingSimple_> >::Pattern(TNeedle2&&, int, typename seqan::DisableIf<seqan::IsSameType<const typename std::remove_reference<_Up>::type&, const seqan::Pattern<TNeedle, seqan::Tag<seqan::HammingSimple_> >&> >::Type*) [with TNeedle2 = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TNeedle = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::DisableIf<seqan::IsSameType<const typename std::remove_reference<_Up>::type&, const seqan::Pattern<TNeedle, seqan::Tag<seqan::HammingSimple_> >&> >::Type = void; typename std::remove_reference<_Up>::type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:98:104:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:24:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:209:39:   required from 'unsigned int seqan::getMDString(TMDString&, TGaps1&, TGaps2&) [with TMDString = String<char, Alloc<> >; TGaps1 = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGaps2 = Gaps<ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:572:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::ModifiedString<seqan::ModifiedString<const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::ModView<seqan::FunctorComplement<seqan::SimpleType<unsigned char, seqan::Dna5Q_> > > >, seqan::Tag<seqan::ModReverse_> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:663:20:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::end(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:458:102:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:811:66:   required from 'void seqan::_fillBamSeqAndQual(TSeq&, TQual&, const TRead&) [with TSeq = String<SimpleType<unsigned char, Iupac_>, Alloc<> >; TQual = String<char, Alloc<> >; TRead = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:31:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:619:22:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, TSpec>, const seqan::Tag<TExpand> >::Type seqan::begin(ModifiedString<THost, TSpec>&, Tag<TExpand>) [with THost = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > >; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, TSpec>, const Tag<TExpand> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:503:103:   required from 'typename seqan::Iterator<const seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::end(const ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >; TTagSpec = Standard_; typename Iterator<const ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:812:64:   required from 'void seqan::_fillBamSeqAndQual(TSeq&, TQual&, const TRead&) [with TSeq = String<SimpleType<unsigned char, Iupac_>, Alloc<> >; TQual = String<char, Alloc<> >; TRead = ModifiedString<ModifiedString<const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, ModView<FunctorComplement<SimpleType<unsigned char, Dna5Q_> > > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:936:31:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5Q_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:56:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:357:37:   required from 'typename seqan::Convert<seqan::ModifiedAlphabet<THost, seqan::ModExpand<CHAR, TSpec> >, seqan::Proxy<TSpec2> >::Type seqan::convertImpl(Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, T>, const Proxy<TSpec2>&) [with THost = SimpleType<unsigned char, Dna5Q_>; char CHAR = '-'; TSpec = Tag<Default_>; T = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >; TSpec2 = IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > >; typename Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, Proxy<TSpec2> >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_conversion.h:149:23:   required from 'typename seqan::Convert<TTarget, TSource>::Type seqan::convert(const TSource&) [with TTarget = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >; TSource = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >; typename Convert<TTarget, TSource>::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:92:59:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:169:17:   required from 'typename seqan::Source<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::source(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Source<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5Q_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:193:24:   required from 'typename seqan::GetValue<const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::getValue(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename GetValue<const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:275:20:   required from 'typename seqan::GetValue<const seqan::Proxy<seqan::IteratorProxy<TIterator> > >::Type seqan::getValue(const Proxy<IteratorProxy<TIterator> >&) [with TIterator = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename GetValue<const Proxy<IteratorProxy<TIterator> > >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_alphabet_expansion.h:357:37:   required from 'typename seqan::Convert<seqan::ModifiedAlphabet<THost, seqan::ModExpand<CHAR, TSpec> >, seqan::Proxy<TSpec2> >::Type seqan::convertImpl(Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, T>, const Proxy<TSpec2>&) [with THost = SimpleType<unsigned char, Dna5Q_>; char CHAR = '-'; TSpec = Tag<Default_>; T = Proxy<IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >; TSpec2 = IteratorProxy<Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > >; typename Convert<ModifiedAlphabet<THost, ModExpand<CHAR, TSpec> >, Proxy<TSpec2> >::Type = ModifiedAlphabet<SimpleType<unsigned char, Dna5Q_>, ModExpand<'-'> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_conversion.h:149:23:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/cigar.h:562:29:   required from 'void seqan::alignAndGetCigarString(TCigar&, TMDString&, const TContig&, const TReadSeq&, TAlignedRead&, TErrors&, BamAlignFunctorDefault&) [with TCigar = String<CigarElement<> >; TMDString = String<char, Alloc<> >; TContig = ContigStoreElement<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, GapAnchor<long int>, void>; TReadSeq = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TAlignedRead = const AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TErrors = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:905:27:   required from 'void seqan::setPrimaryMatch(BamAlignmentRecord&, FragmentStore<TSpec, TConfig>&, const TAlignedRead&, const TAlignQuality&, TBamIOFunctor&, bool) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TAlignQuality = AlignQualityStoreElement<signed char, void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1076:24:   required from 'void seqan::writeAlignments(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1109:20:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&, TBamIOFunctor&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TBamIOFunctor = BamAlignFunctorDefault]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:1118:17:   required from 'void seqan::writeRecords(FormattedFile<Tag<Bam_>, Tag<Output_>, TSpec>&, FragmentStore<TSpec, TConfig>&) [with TSpec = void; TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/minimapper.cpp:114:17:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5Q_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_modview.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_modview.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_modview.cpp:10:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   10 |     public std::unary_function<char, char>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_modifier_modview
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o -o ../bin/demo_unassigned_or_unused_modifier_modview  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Built target demo_unassigned_or_unused_modifier_modview
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_nested.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_nested.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/modifier_nested.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_modifier_nested
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o -o ../bin/demo_unassigned_or_unused_modifier_nested  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Built target demo_unassigned_or_unused_modifier_nested
make  -f demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/parse_lm_stellar.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/parse_lm_stellar.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/parse_lm_stellar.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parse_lm.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/parse_lm_stellar.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(TLocalMatchStore&, TForwardIter&, const StellarGff&) [with TLocalMatchStore = LocalMatchStore<>; TForwardIter = Iter<std::basic_fstream<char>, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parse_lm/parse_stellar_gff.h:109:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(TLocalMatchStore&, TForwardIter&, const StellarGff&) [with TLocalMatchStore = LocalMatchStore<>; TForwardIter = Iter<std::basic_fstream<char>, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(TLocalMatchStore&, TForwardIter&, const StellarGff&) [with TLocalMatchStore = LocalMatchStore<>; TForwardIter = Iter<std::basic_fstream<char>, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parse_lm/parse_stellar_gff.h:117:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(TLocalMatchStore&, TForwardIter&, const StellarGff&) [with TLocalMatchStore = LocalMatchStore<>; TForwardIter = Iter<std::basic_fstream<char>, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(TLocalMatchStore&, TForwardIter&, const StellarGff&) [with TLocalMatchStore = LocalMatchStore<>; TForwardIter = Iter<std::basic_fstream<char>, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parse_lm/parse_stellar_gff.h:162:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(TLocalMatchStore&, TForwardIter&, const StellarGff&) [with TLocalMatchStore = LocalMatchStore<>; TForwardIter = Iter<std::basic_fstream<char>, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(TLocalMatchStore&, TForwardIter&, const StellarGff&) [with TLocalMatchStore = LocalMatchStore<>; TForwardIter = Iter<std::basic_fstream<char>, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parse_lm/parse_stellar_gff.h:170:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(TLocalMatchStore&, TForwardIter&, const StellarGff&) [with TLocalMatchStore = LocalMatchStore<>; TForwardIter = Iter<std::basic_fstream<char>, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_parse_lm_stellar
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o -o ../bin/demo_unassigned_or_unused_parse_lm_stellar  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Built target demo_unassigned_or_unused_parse_lm_stellar
make  -f demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/rooted_iterator.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/rooted_iterator.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/rooted_iterator.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_rooted_iterator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o -o ../bin/demo_unassigned_or_unused_rooted_iterator  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Built target demo_unassigned_or_unused_rooted_iterator
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp
[ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_minimapper
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_minimapper.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o -o ../bin/demo_unassigned_or_unused_minimapper  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Built target demo_unassigned_or_unused_minimapper
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp:66:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp:66:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp:66:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp:66:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sample_seqs.cpp:66:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:214:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:214:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:214:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:214:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ofstream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ofstream<char>; TSpec = void; TConfig = FragmentStoreConfig<void>; TContigId = unsigned int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:214:31:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:134:25:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:134:25:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:134:25:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:134:25:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:142:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1035:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const CharString&, bool) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; CharString = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = void; TFSConfig = FragmentStoreConfig<void>; TFileNames = const char*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:134:25:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:165:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TGapAnchors&) [with TSource = seqan::Tag<seqan::Nothing_>; TGapAnchors = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:142:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   required from 'seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> >::Holder(const THostValue&) [with TValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; THostValue = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:175:9:   required from 'seqan::Gaps<TSequence, seqan::AnchorGaps<TGapAnchors> >::Gaps(const TSourceNoConstNoRef&, TGapAnchors&) [with TSource = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TGapAnchors = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >; TSourceNoConstNoRef = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sam2svg.cpp:142:16:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_sample_seqs
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o -o ../bin/demo_unassigned_or_unused_sample_seqs  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Built target demo_unassigned_or_unused_sample_seqs
make  -f demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/seeds.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/seeds.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/seeds.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_seeds
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_seeds.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o -o ../bin/demo_unassigned_or_unused_seeds  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Built target demo_unassigned_or_unused_seeds
make  -f demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:37,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervalsExcludeTouching(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<int, Pair<unsigned int, unsigned int, BitPacked<31, 1> > > > >; TValue = long unsigned int; TCargo = Pair<unsigned int, unsigned int, BitPacked<31, 1> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:571:49:   required from 'void seqan::matchRefinement(TAlignmentString&, StringSet<TSequence, TSpec>&, TScore&, TOutGraph&, typename Size<typename Value<TContext>::Type>::Type, TAnnotation&, Tag<TExpand>) [with TAlignmentString = String<Fragment<> >; TAnnotation = bool; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > > > >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Owner<>; TScore = unsigned int; TTagSpec = TagExactRefinement_; typename Size<typename Value<TContext>::Type>::Type = long unsigned int; typename Value<TContext>::Type = Fragment<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h:678:20:   required from 'void seqan::matchRefinement(TFragmentString&, StringSet<TSequence, TSpec>&, TOutGraph&) [with TFragmentString = String<Fragment<> >; TOutGraph = Graph<Alignment<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> >, Dependent<Tag<TagInsist_> > > > >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Owner<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:57:20:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1667:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1667 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1679:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1679 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1701:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >& seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >&)' is deprecated [-Wdeprecated-copy]
 1701 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > > >' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<int, seqan::Pair<unsigned int, unsigned int, seqan::BitPacked<31, 1> > >]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:25:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:25:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; TSpec = BottomUp<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >; TSpec = BottomUp<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1605:14:   required from 'void seqan::goBegin(Iter<Index<TText, IndexEsa<TSpec> >, VSTree<BottomUp<TSpec> > >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TIndexSpec = void; TSpec = Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:453:20:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexEsa<long unsigned int>& seqan::VertexEsa<long unsigned int>::operator=(const seqan::VertexEsa<long unsigned int>&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:137:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:222:9: note: because 'seqan::VertexEsa<long unsigned int>' has user-provided 'seqan::VertexEsa<TSize>::VertexEsa(const seqan::VertexEsa<TSize>&) [with TSize = long unsigned int]'
  222 |         VertexEsa(VertexEsa const &other):
      |         ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:25:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:25:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:25:36:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TString = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = String<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Alloc<> >; TSequence = String<SimpleType<unsigned char, Dna_>, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > > >, Source<> >, Caster<SimpleType<unsigned char, Dna_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:658:27:   required from 'bool seqan::indexCreate(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = IndexEsa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_base.h:461:21:   required from 'void seqan::_indexRequireBottomUpIteration(Index<TText, IndexEsa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna_>, Alloc<> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:452:43:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::BottomUp<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSpec = seqan::Postorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_algs_multi.h:122:41:   required from 'seqan::Iter<TSTree, seqan::VSTree<seqan::BottomUp<seqan::Mums> > >::Iter(TSTree&, TSize) [with TSTree = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<> > > >; TSize = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/segmentalignment.cpp:37:48:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_sam2svg
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o -o ../bin/demo_unassigned_or_unused_sam2svg  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Built target demo_unassigned_or_unused_sam2svg
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sequence_length.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sequence_length.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sequence_length.cpp:4:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sequence_length.cpp:20:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sequence_length.cpp:20:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sequence_length.cpp:20:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sequence_length.cpp:20:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/sequence_length.cpp:20:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_sequence_length
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o -o ../bin/demo_unassigned_or_unused_sequence_length  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Built target demo_unassigned_or_unused_sequence_length
make  -f demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:52:15:   required from 'void convertToHardMasked(TStream&, const char*) [with TStream = std::basic_ostream<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:82:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:52:15:   required from 'void convertToHardMasked(TStream&, const char*) [with TStream = std::basic_ostream<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:82:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:52:15:   required from 'void convertToHardMasked(TStream&, const char*) [with TStream = std::basic_ostream<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:82:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:52:15:   required from 'void convertToHardMasked(TStream&, const char*) [with TStream = std::basic_ostream<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:82:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:52:15:   required from 'void convertToHardMasked(TStream&, const char*) [with TStream = std::basic_ostream<char>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/soft_to_hard_masking.cpp:82:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_soft_to_hard_masking
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o -o ../bin/demo_unassigned_or_unused_soft_to_hard_masking  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Built target demo_unassigned_or_unused_soft_to_hard_masking
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/example1.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/example1.cpp:3:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/example1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_file_io_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_file_io_example1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Built target demo_unassigned_or_unused_tutorial_file_io_example1
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_segmentalignment
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o -o ../bin/demo_unassigned_or_unused_segmentalignment  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Built target demo_unassigned_or_unused_segmentalignment
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/solution1.cpp
[ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Built target demo_unassigned_or_unused_tutorial_file_io_mmap_string_example
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/solution1.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/solution1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp:8:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Built target demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/count_characters.cpp
[ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_count_characters
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/link.txt --verbose=1
[ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_file_io_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_count_characters  -lrt -lz -lbz2
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_file_io_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Built target demo_unassigned_or_unused_tutorial_sequence_count_characters
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp
[ 92%] Built target demo_unassigned_or_unused_tutorial_file_io_solution1
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/replace_as.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/replace_as.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/replace_as.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters  -lrt -lz -lbz2
[ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_replace_as
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_replace_as  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Built target demo_unassigned_or_unused_tutorial_sequence_count_generic_characters
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Built target demo_unassigned_or_unused_tutorial_sequence_replace_as
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp:4:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/link.txt --verbose=1
[ 93%] Built target demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/DependInfo.cmake "--color="
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/example1.cpp
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Built target demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/example1.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/example1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_example1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_example1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Built target demo_unassigned_or_unused_tutorials_custim_io_example1
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp
[ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Built target demo_unassigned_or_unused_tutorials_custim_io_parse_blastn
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp:5:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Built target demo_unassigned_or_unused_tutorials_custim_io_parse_gff2
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution1.cpp
[ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_reader_demo
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_reader_demo  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Built target demo_unassigned_or_unused_tutorials_custim_io_reader_demo
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution2.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution1.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution1.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution2.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution2.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 94%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution1  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution1
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution3.cpp
[ 94%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution2
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution2  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution2
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution4.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution3.cpp:4:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution3.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution4.cpp:2:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution4.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 94%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/link.txt --verbose=1
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = const char*]',
    inlined from 'int main(int, const char**)' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution4.cpp:23:33:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main(int, const char**)':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = const char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = const char*]',
    inlined from 'int main(int, const char**)' at /build/reproducible-path/seqan2-2.4.0+dfsg/demos/unassigned_or_unused/tutorials_custim_io/solution4.cpp:24:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'int main(int, const char**)':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = const char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution3  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution3
make  -f apps/alf/CMakeFiles/alf.dir/build.make apps/alf/CMakeFiles/alf.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/alf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/alf/CMakeFiles/alf.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/alf/CMakeFiles/alf.dir/build.make apps/alf/CMakeFiles/alf.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution4
[ 94%] Building CXX object apps/alf/CMakeFiles/alf.dir/alf.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/alf && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.1.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/alf/CMakeFiles/alf.dir/alf.cpp.o -MF CMakeFiles/alf.dir/alf.cpp.o.d -o CMakeFiles/alf.dir/alf.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution4  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution4
make  -f apps/bs_tools/CMakeFiles/bisar.dir/build.make apps/bs_tools/CMakeFiles/bisar.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools/CMakeFiles/bisar.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/bs_tools/CMakeFiles/bisar.dir/build.make apps/bs_tools/CMakeFiles/bisar.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Building CXX object apps/bs_tools/CMakeFiles/bisar.dir/bisar.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.1.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -ffloat-store -ffp-contract=off    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/bs_tools/CMakeFiles/bisar.dir/bisar.cpp.o -MF CMakeFiles/bisar.dir/bisar.cpp.o.d -o CMakeFiles/bisar.dir/bisar.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:42:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar_score.h:28:57: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   28 | struct FunctorDna5OrdValueComplement<int> : public std::unary_function<int,int>
      |                                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/statistics.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.h:157:26:   required from 'int reAlign4(TReadGaps&, TContigGaps&, TFragmentStore&, TId&, TBsScoreCTLeft&, TBsScoreCTRight&, TBsScoreGALeft&, TBsScoreGARight&, TOptions&) [with TReadGaps = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TContigGaps = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TFragmentStore = seqan::FragmentStore<seqan::MyFragmentStoreConfig>; TId = unsigned int; TBsScoreCTLeft = seqan::Score<int, seqan::BsTagList<seqan::Tag<seqan::BsCaseCT_>, seqan::Tag<seqan::BsNonSimple_>, seqan::Tag<seqan::Left_>, seqan::Tag<seqan::InnerCell_> > >; TBsScoreCTRight = seqan::Score<int, seqan::BsTagList<seqan::Tag<seqan::BsCaseCT_>, seqan::Tag<seqan::BsNonSimple_>, seqan::Tag<seqan::Right_>, seqan::Tag<seqan::InnerCell_> > >; TBsScoreGALeft = seqan::Score<int, seqan::BsTagList<seqan::Tag<seqan::BsCaseGA_>, seqan::Tag<seqan::BsNonSimple_>, seqan::Tag<seqan::Left_>, seqan::Tag<seqan::InnerCell_> > >; TBsScoreGARight = seqan::Score<int, seqan::BsTagList<seqan::Tag<seqan::BsCaseGA_>, seqan::Tag<seqan::BsNonSimple_>, seqan::Tag<seqan::Right_>, seqan::Tag<seqan::InnerCell_> > >; TOptions = AppOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.h:1168:17:   required from 'bool postProcessMain(TOptions&, const TModel&) [with TOptions = AppOptions; TModel = seqan::Tag<seqan::BsNonSimple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:294:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.h:157:26:   required from 'int reAlign4(TReadGaps&, TContigGaps&, TFragmentStore&, TId&, TBsScoreCTLeft&, TBsScoreCTRight&, TBsScoreGALeft&, TBsScoreGARight&, TOptions&) [with TReadGaps = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TContigGaps = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TFragmentStore = seqan::FragmentStore<seqan::MyFragmentStoreConfig>; TId = unsigned int; TBsScoreCTLeft = seqan::Score<int, seqan::BsTagList<seqan::Tag<seqan::BsCaseCT_>, seqan::Tag<seqan::BsNonSimple_>, seqan::Tag<seqan::Left_>, seqan::Tag<seqan::InnerCell_> > >; TBsScoreCTRight = seqan::Score<int, seqan::BsTagList<seqan::Tag<seqan::BsCaseCT_>, seqan::Tag<seqan::BsNonSimple_>, seqan::Tag<seqan::Right_>, seqan::Tag<seqan::InnerCell_> > >; TBsScoreGALeft = seqan::Score<int, seqan::BsTagList<seqan::Tag<seqan::BsCaseGA_>, seqan::Tag<seqan::BsNonSimple_>, seqan::Tag<seqan::Left_>, seqan::Tag<seqan::InnerCell_> > >; TBsScoreGARight = seqan::Score<int, seqan::BsTagList<seqan::Tag<seqan::BsCaseGA_>, seqan::Tag<seqan::BsNonSimple_>, seqan::Tag<seqan::Right_>, seqan::Tag<seqan::InnerCell_> > >; TOptions = AppOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.h:1168:17:   required from 'bool postProcessMain(TOptions&, const TModel&) [with TOptions = AppOptions; TModel = seqan::Tag<seqan::BsNonSimple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:294:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar_base.h:21:14:   required from 'bool loadReadsCroppedId(seqan::FragmentStore<TSpec, TConfig>&, TFileName&) [with TFSSpec = seqan::MyFragmentStoreConfig; TFSConfig = seqan::FragmentStoreConfig<seqan::MyFragmentStoreConfig>; TFileName = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.h:996:27:   required from 'bool postProcessMain(TOptions&, const TModel&) [with TOptions = AppOptions; TModel = seqan::Tag<seqan::BsNonSimple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:294:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar_base.h:21:14:   required from 'bool loadReadsCroppedId(seqan::FragmentStore<TSpec, TConfig>&, TFileName&) [with TFSSpec = seqan::MyFragmentStoreConfig; TFSConfig = seqan::FragmentStoreConfig<seqan::MyFragmentStoreConfig>; TFileName = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.h:996:27:   required from 'bool postProcessMain(TOptions&, const TModel&) [with TOptions = AppOptions; TModel = seqan::Tag<seqan::BsNonSimple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:294:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free/af_n2.h: In instantiation of 'void seqan::_alignmentFreeComparison(Matrix<TValue, 2>&, const TStringSet&, const AFScore<const Tag<N2_> >&) [with TValue = double; TStringSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free/alignment_free_comparison.h:101:29:   required from 'void seqan::alignmentFreeComparison(Matrix<TFloat, 2>&, const TStringSet&, const TComparisonMethod&) [with TStringSet = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> > >; TValue = double; TComparisonMethod = AFScore<const Tag<N2_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:188:32:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/alignment_free/af_n2.h:189:34: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<double> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<double> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<double> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  189 |         itStandardisedKmerCounts = begin(standardisedKmerCounts);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<double> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<double> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:164:13:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:164:13:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar_base.h:21:14:   required from 'bool loadReadsCroppedId(seqan::FragmentStore<TSpec, TConfig>&, TFileName&) [with TFSSpec = seqan::MyFragmentStoreConfig; TFSConfig = seqan::FragmentStoreConfig<seqan::MyFragmentStoreConfig>; TFileName = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.h:996:27:   required from 'bool postProcessMain(TOptions&, const TModel&) [with TOptions = AppOptions; TModel = seqan::Tag<seqan::BsNonSimple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:294:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:164:13:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:164:13:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf/alf.cpp:164:13:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar_base.h:21:14:   required from 'bool loadReadsCroppedId(seqan::FragmentStore<TSpec, TConfig>&, TFileName&) [with TFSSpec = seqan::MyFragmentStoreConfig; TFSConfig = seqan::FragmentStoreConfig<seqan::MyFragmentStoreConfig>; TFileName = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.h:996:27:   required from 'bool postProcessMain(TOptions&, const TModel&) [with TOptions = AppOptions; TModel = seqan::Tag<seqan::BsNonSimple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:294:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar_base.h:21:14:   required from 'bool loadReadsCroppedId(seqan::FragmentStore<TSpec, TConfig>&, TFileName&) [with TFSSpec = seqan::MyFragmentStoreConfig; TFSConfig = seqan::FragmentStoreConfig<seqan::MyFragmentStoreConfig>; TFileName = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.h:996:27:   required from 'bool postProcessMain(TOptions&, const TModel&) [with TOptions = AppOptions; TModel = seqan::Tag<seqan::BsNonSimple_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/bisar.cpp:294:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 94%] Linking CXX executable ../../bin/alf
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/alf && /usr/bin/cmake -E cmake_link_script CMakeFiles/alf.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/alf.dir/alf.cpp.o -o ../../bin/alf  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Built target alf
make  -f apps/bs_tools/CMakeFiles/casbar.dir/build.make apps/bs_tools/CMakeFiles/casbar.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools/CMakeFiles/casbar.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/bs_tools/CMakeFiles/casbar.dir/build.make apps/bs_tools/CMakeFiles/casbar.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Building CXX object apps/bs_tools/CMakeFiles/casbar.dir/casbar.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.1.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -ffloat-store -ffp-contract=off    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/bs_tools/CMakeFiles/casbar.dir/casbar.cpp.o -MF CMakeFiles/casbar.dir/casbar.cpp.o.d -o CMakeFiles/casbar.dir/casbar.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_realignment.h:6,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_score.h:42:57: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   42 | struct FunctorDna5OrdValueComplement<int> : public std::unary_function<int,int>
      |                                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_realignment.h:17:23: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   17 |         public ::std::binary_function < typename Value<TMatches>::Type, typename Value<TMatchQualities>::Type, bool >
      |                       ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_realignment.h:66:39: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   66 |     struct LessPosLen : public ::std::binary_function < TPosLen, TPosLen, bool >
      |                                       ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_realignment.h:81:23: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   81 |         public ::std::binary_function < typename Value<TMatches>::Type, typename Value<TMatchQualities>::Type, bool >
      |                       ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_realignment.h:129:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  129 |     struct LessId : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_realignment.h:142:37: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  142 |     struct LessGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_realignment.h:165:40: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  165 |     struct LessGPosEnd : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                        ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_realignment.h:184:42: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  184 |     struct LessGPosEndOa : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                          ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar_realignment.h:206:36: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  206 |     struct HigherQ : public ::std::binary_function < TQual, TQual, bool >
      |                                    ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Vcf_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:873:31:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bed_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bed_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::Bed_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:899:31:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1618:57:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = SnpStoreSpec_; TConfig = FragmentStoreConfig<SnpStoreSpec_>; TContigId = int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.h:1163:31:   required from 'void doCheckRealignCall(TFragmentStore&, TContigPos, TContigPos, TContigPos, TSetContigAnchorGaps&, TVcfStream&, TBedStream&, TMethOptions&, TOptions&) [with TFragmentStore = seqan::FragmentStore<seqan::SnpStoreSpec_>; TContigPos = long int; TSetContigAnchorGaps = seqan::String<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::Alloc<> >; TVcfStream = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; TBedStream = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >; TMethOptions = MethCallingOptions; TOptions = SNPCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:742:35:   required from 'bool detectSNPsForContig(seqan::VcfFileOut&, seqan::BedFileOut&, seqan::FragmentStore<TSpec>&, TContigId&, TBamFileIns&, TRecords&, TContigIntervals&, TOptions&, TMethOptions&) [with TSpec = seqan::SnpStoreSpec_; TContigId = int; TBamFileIns = std::vector<seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >*>; TRecords = std::vector<seqan::BamAlignmentRecord>; TContigIntervals = seqan::String<seqan::String<seqan::Interval<long int> > >; TOptions = SNPCallingOptions; TMethOptions = MethCallingOptions; seqan::VcfFileOut = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; seqan::BedFileOut = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:901:32:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.h:1355:36:   required from 'void doSnpAndMethCalling(TFragmentStore&, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, typename TFragmentStore::TContigPos, bool, TVcfStream&, TBedStream&, TMethOptions&, TOptions&) [with TFragmentStore = seqan::FragmentStore<seqan::SnpStoreSpec_>; TVcfStream = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; TBedStream = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >; TMethOptions = MethCallingOptions; TOptions = SNPCallingOptions; typename TFragmentStore::TContigPos = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:755:36:   required from 'bool detectSNPsForContig(seqan::VcfFileOut&, seqan::BedFileOut&, seqan::FragmentStore<TSpec>&, TContigId&, TBamFileIns&, TRecords&, TContigIntervals&, TOptions&, TMethOptions&) [with TSpec = seqan::SnpStoreSpec_; TContigId = int; TBamFileIns = std::vector<seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >*>; TRecords = std::vector<seqan::BamAlignmentRecord>; TContigIntervals = seqan::String<seqan::String<seqan::Interval<long int> > >; TOptions = SNPCallingOptions; TMethOptions = MethCallingOptions; seqan::VcfFileOut = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; seqan::BedFileOut = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:901:32:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>; TFileNames = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:792:16:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = SnpStoreSpec_; TConfig = FragmentStoreConfig<SnpStoreSpec_>; TContigId = int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.h:1163:31:   required from 'void doCheckRealignCall(TFragmentStore&, TContigPos, TContigPos, TContigPos, TSetContigAnchorGaps&, TVcfStream&, TBedStream&, TMethOptions&, TOptions&) [with TFragmentStore = seqan::FragmentStore<seqan::SnpStoreSpec_>; TContigPos = long int; TSetContigAnchorGaps = seqan::String<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::Alloc<> >; TVcfStream = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; TBedStream = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >; TMethOptions = MethCallingOptions; TOptions = SNPCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:742:35:   required from 'bool detectSNPsForContig(seqan::VcfFileOut&, seqan::BedFileOut&, seqan::FragmentStore<TSpec>&, TContigId&, TBamFileIns&, TRecords&, TContigIntervals&, TOptions&, TMethOptions&) [with TSpec = seqan::SnpStoreSpec_; TContigId = int; TBamFileIns = std::vector<seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >*>; TRecords = std::vector<seqan::BamAlignmentRecord>; TContigIntervals = seqan::String<seqan::String<seqan::Interval<long int> > >; TOptions = SNPCallingOptions; TMethOptions = MethCallingOptions; seqan::VcfFileOut = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; seqan::BedFileOut = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:901:32:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:87,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = SnpStoreSpec_; TConfig = FragmentStoreConfig<SnpStoreSpec_>; TContigId = int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.h:1163:31:   required from 'void doCheckRealignCall(TFragmentStore&, TContigPos, TContigPos, TContigPos, TSetContigAnchorGaps&, TVcfStream&, TBedStream&, TMethOptions&, TOptions&) [with TFragmentStore = seqan::FragmentStore<seqan::SnpStoreSpec_>; TContigPos = long int; TSetContigAnchorGaps = seqan::String<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::Alloc<> >; TVcfStream = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; TBedStream = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >; TMethOptions = MethCallingOptions; TOptions = SNPCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:742:35:   required from 'bool detectSNPsForContig(seqan::VcfFileOut&, seqan::BedFileOut&, seqan::FragmentStore<TSpec>&, TContigId&, TBamFileIns&, TRecords&, TContigIntervals&, TOptions&, TMethOptions&) [with TSpec = seqan::SnpStoreSpec_; TContigId = int; TBamFileIns = std::vector<seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >*>; TRecords = std::vector<seqan::BamAlignmentRecord>; TContigIntervals = seqan::String<seqan::String<seqan::Interval<long int> > >; TOptions = SNPCallingOptions; TMethOptions = MethCallingOptions; seqan::VcfFileOut = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; seqan::BedFileOut = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:901:32:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  205 |     return TProxy(it);
      |            ^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:88:27: note:   initializing argument 1 of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]'
   88 |     Proxy(TIterator const _it)
      |           ~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>; TFileNames = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:792:16:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:32:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = SnpStoreSpec_; TConfig = FragmentStoreConfig<SnpStoreSpec_>; TContigId = int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.h:1163:31:   required from 'void doCheckRealignCall(TFragmentStore&, TContigPos, TContigPos, TContigPos, TSetContigAnchorGaps&, TVcfStream&, TBedStream&, TMethOptions&, TOptions&) [with TFragmentStore = seqan::FragmentStore<seqan::SnpStoreSpec_>; TContigPos = long int; TSetContigAnchorGaps = seqan::String<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::Alloc<> >; TVcfStream = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; TBedStream = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >; TMethOptions = MethCallingOptions; TOptions = SNPCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:742:35:   required from 'bool detectSNPsForContig(seqan::VcfFileOut&, seqan::BedFileOut&, seqan::FragmentStore<TSpec>&, TContigId&, TBamFileIns&, TRecords&, TContigIntervals&, TOptions&, TMethOptions&) [with TSpec = seqan::SnpStoreSpec_; TContigId = int; TBamFileIns = std::vector<seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >*>; TRecords = std::vector<seqan::BamAlignmentRecord>; TContigIntervals = seqan::String<seqan::String<seqan::Interval<long int> > >; TOptions = SNPCallingOptions; TMethOptions = MethCallingOptions; seqan::VcfFileOut = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; seqan::BedFileOut = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:901:32:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h: In instantiation of 'seqan::Proxy<seqan::IteratorProxy<TIterator> >::Proxy(TIterator) [with TIterator = seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:205:12:   required from 'typename seqan::Reference<seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > >::Type seqan::value(Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&) [with TGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; typename Reference<Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > > >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_base.h:250:17:   required from 'typename seqan::Reference<seqan::Iter<TContainer, TSpec> >::Type seqan::operator*(Iter<TContainer, TSpec>&) [with TContainer = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TSpec = GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; typename Reference<Iter<TContainer, TSpec> >::Type = Proxy<IteratorProxy<Iter<Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1628:55:   required from 'void seqan::_printRead(TStream&, AlignedReadLayout&, TContigGaps&, TReadGaps&, TAlignedRead&, TLine) [with TStream = std::basic_ostream<char>; TContigGaps = Gaps<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TReadGaps = Gaps<String<char, Alloc<> >, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedRead = AlignedReadStoreElement<long int, GapAnchor<long int>, void>; TLine = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:1777:23:   required from 'void seqan::printAlignment(TStream&, AlignedReadLayout&, FragmentStore<TSpec, TConfig>&, TContigId, TPos, TPos, TNum, TNum) [with TStream = std::basic_ostream<char>; TSpec = SnpStoreSpec_; TConfig = FragmentStoreConfig<SnpStoreSpec_>; TContigId = int; TPos = long int; TNum = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.h:1163:31:   required from 'void doCheckRealignCall(TFragmentStore&, TContigPos, TContigPos, TContigPos, TSetContigAnchorGaps&, TVcfStream&, TBedStream&, TMethOptions&, TOptions&) [with TFragmentStore = seqan::FragmentStore<seqan::SnpStoreSpec_>; TContigPos = long int; TSetContigAnchorGaps = seqan::String<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::Alloc<> >; TVcfStream = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; TBedStream = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >; TMethOptions = MethCallingOptions; TOptions = SNPCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:742:35:   required from 'bool detectSNPsForContig(seqan::VcfFileOut&, seqan::BedFileOut&, seqan::FragmentStore<TSpec>&, TContigId&, TBamFileIns&, TRecords&, TContigIntervals&, TOptions&, TMethOptions&) [with TSpec = seqan::SnpStoreSpec_; TContigId = int; TBamFileIns = std::vector<seqan::FormattedFile<seqan::Tag<seqan::Bam_>, seqan::Tag<seqan::Input_> >*>; TRecords = std::vector<seqan::BamAlignmentRecord>; TContigIntervals = seqan::String<seqan::String<seqan::Interval<long int> > >; TOptions = SNPCallingOptions; TMethOptions = MethCallingOptions; seqan::VcfFileOut = seqan::FormattedFile<seqan::Tag<seqan::Vcf_>, seqan::Tag<seqan::Output_> >; seqan::BedFileOut = seqan::FormattedFile<seqan::Tag<seqan::Bed_>, seqan::Tag<seqan::Output_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:901:32:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/proxy_iterator.h:89:15: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
   89 |             : data_iterator(_it)
      |               ^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::String<char, seqan::Alloc<> >, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>; TFileNames = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:792:16:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>; TFileNames = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:792:16:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:996:18:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const StringSet<String<char, Alloc<> > >&, bool) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io.h:1043:23:   required from 'bool seqan::loadContigs(FragmentStore<TSpec, TConfig>&, const TFileNames&) [with TFSSpec = SnpStoreSpec_; TFSConfig = FragmentStoreConfig<SnpStoreSpec_>; TFileNames = StringSet<String<char, Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:792:16:   required from 'int detectSNPs(SNPCallingOptions&, TMethOptions&) [with TMethOptions = MethCallingOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/casbar.cpp:1265:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 94%] Linking CXX executable ../../bin/bisar
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/bisar.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -ffloat-store -ffp-contract=off -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/bisar.dir/bisar.cpp.o -o ../../bin/bisar  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Built target bisar
make  -f apps/bs_tools/CMakeFiles/four2three.dir/build.make apps/bs_tools/CMakeFiles/four2three.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools/CMakeFiles/four2three.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/bs_tools/CMakeFiles/four2three.dir/build.make apps/bs_tools/CMakeFiles/four2three.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/bs_tools/CMakeFiles/four2three.dir/four2three.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.1.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -ffloat-store -ffp-contract=off    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/bs_tools/CMakeFiles/four2three.dir/four2three.cpp.o -MF CMakeFiles/four2three.dir/four2three.cpp.o.d -o CMakeFiles/four2three.dir/four2three.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.h:14:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   14 | struct ConvertCT : public ::std::unary_function<char,char>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.h:23:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   23 | struct ConvertGA : public ::std::unary_function<char,char>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.h:41:23:   required from 'bool preProcess(TOptions&) [with TOptions = AppOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp:146:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.h:41:23:   required from 'bool preProcess(TOptions&) [with TOptions = AppOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp:146:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.h:41:23:   required from 'bool preProcess(TOptions&) [with TOptions = AppOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp:146:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.h:42:23:   required from 'bool preProcess(TOptions&) [with TOptions = AppOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp:146:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.h:41:23:   required from 'bool preProcess(TOptions&) [with TOptions = AppOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/four2three.cpp:146:15:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 95%] Linking CXX executable ../../bin/four2three
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/four2three.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -ffloat-store -ffp-contract=off -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/four2three.dir/four2three.cpp.o -o ../../bin/four2three  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target four2three
make  -f apps/dfi/CMakeFiles/dfi.dir/build.make apps/dfi/CMakeFiles/dfi.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/dfi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/dfi/CMakeFiles/dfi.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/dfi/CMakeFiles/dfi.dir/build.make apps/dfi/CMakeFiles/dfi.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/dfi/CMakeFiles/dfi.dir/dfi.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/dfi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.1.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/dfi/CMakeFiles/dfi.dir/dfi.cpp.o -MF CMakeFiles/dfi.dir/dfi.cpp.o.d -o CMakeFiles/dfi.dir/dfi.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:27:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:28:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:268:34: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  268 | struct LessSubstringEnd : public binary_function<TSubstringEntry, TSubstringEntry, bool >
      |                                  ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:292:27: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  292 | struct LessRange : public binary_function<TSubstringEntry, TSubstringEntry, bool >
      |                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:309:25: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  309 | struct LessLex : public binary_function<TSubstringEntry, TSubstringEntry, bool >
      |                         ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:248:12:   required from 'bool loadDatasets(TSequences&, const TFileNames&, TDatasets&) [with TSequences = seqan::StringSet<seqan::String<unsigned char>, seqan::Owner<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >; TDatasets = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:498:19:   required from 'int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool, const DFIOptions&) [with TPredHull = PredMinFreq; TPred = PredMaxFreq; TAlphabet = unsigned char; TParamPredHull = seqan::String<unsigned int, seqan::Alloc<> >; TParamPred = seqan::String<unsigned int, seqan::Alloc<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:835:68:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:248:12:   required from 'bool loadDatasets(TSequences&, const TFileNames&, TDatasets&) [with TSequences = seqan::StringSet<seqan::String<unsigned char>, seqan::Owner<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >; TDatasets = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:498:19:   required from 'int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool, const DFIOptions&) [with TPredHull = PredMinFreq; TPred = PredMaxFreq; TAlphabet = unsigned char; TParamPredHull = seqan::String<unsigned int, seqan::Alloc<> >; TParamPred = seqan::String<unsigned int, seqan::Alloc<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:835:68:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:248:12:   required from 'bool loadDatasets(TSequences&, const TFileNames&, TDatasets&) [with TSequences = seqan::StringSet<seqan::String<unsigned char>, seqan::Owner<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >; TDatasets = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:498:19:   required from 'int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool, const DFIOptions&) [with TPredHull = PredMinFreq; TPred = PredMaxFreq; TAlphabet = unsigned char; TParamPredHull = seqan::String<unsigned int, seqan::Alloc<> >; TParamPred = seqan::String<unsigned int, seqan::Alloc<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:835:68:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:248:12:   required from 'bool loadDatasets(TSequences&, const TFileNames&, TDatasets&) [with TSequences = seqan::StringSet<seqan::String<unsigned char>, seqan::Owner<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >; TDatasets = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:498:19:   required from 'int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool, const DFIOptions&) [with TPredHull = PredMinFreq; TPred = PredMaxFreq; TAlphabet = unsigned char; TParamPredHull = seqan::String<unsigned int, seqan::Alloc<> >; TParamPred = seqan::String<unsigned int, seqan::Alloc<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:835:68:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:248:12:   required from 'bool loadDatasets(TSequences&, const TFileNames&, TDatasets&) [with TSequences = seqan::StringSet<seqan::String<unsigned char>, seqan::Owner<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >; TDatasets = seqan::String<unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:498:19:   required from 'int runDFI(const TFileNames&, TParamPredHull, TParamPred, bool, const DFIOptions&) [with TPredHull = PredMinFreq; TPred = PredMaxFreq; TAlphabet = unsigned char; TParamPredHull = seqan::String<unsigned int, seqan::Alloc<> >; TParamPred = seqan::String<unsigned int, seqan::Alloc<> >; TFileNames = std::vector<std::__cxx11::basic_string<char> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/dfi.cpp:835:68:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 95%] Linking CXX executable ../../bin/casbar
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/casbar.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -ffloat-store -ffp-contract=off -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/casbar.dir/casbar.cpp.o -o ../../bin/casbar  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target casbar
make  -f apps/fiona/CMakeFiles/compute_gain.dir/build.make apps/fiona/CMakeFiles/compute_gain.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona/CMakeFiles/compute_gain.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/fiona/CMakeFiles/compute_gain.dir/build.make apps/fiona/CMakeFiles/compute_gain.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/fiona/CMakeFiles/compute_gain.dir/compute_gain.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/fiona/CMakeFiles/compute_gain.dir/compute_gain.cpp.o -MF CMakeFiles/compute_gain.dir/compute_gain.cpp.o.d -o CMakeFiles/compute_gain.dir/compute_gain.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:7:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:2:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:11:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:907:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:907:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:907:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:907:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:907:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = Stats*; TParam = Stats]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Stats*; TParam = Stats]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:511:23:   required from 'void seqan::_arrayConstructMoveDefault(TSource1, TSource2, TTarget) [with TTarget = Stats*; TSource1 = Stats*; TSource2 = Stats*]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1055:31:   required from 'void seqan::_arrayConstructMovePointer(TValue*, TValue*, TValue*, False) [with TValue = Stats]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1064:31:   required from 'void seqan::arrayConstructMove(TValue*, TValue*, TValue*) [with TValue = Stats]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1683:27:   required from 'void seqan::_reserveStorage(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Stats; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1697:20:   required from 'typename seqan::Size<seqan::String<TValue, TSpec> >::Type seqan::reserve(String<TValue, TSpec>&, TSize_, Tag<TUsage>) [with TValue = Stats; TSpec = Alloc<>; TSize_ = long unsigned int; TExpand = TagGenerous_; typename Size<String<TValue, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1725:45:   required from 'static typename seqan::Size<T>::Type seqan::_Resize_String<TExpand>::resize_(T&, typename seqan::Size<T>::Type) [with T = seqan::String<Stats>; TExpand = seqan::Tag<seqan::TagGenerous_>; typename seqan::Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1785:50:   required from 'typename seqan::Size<seqan::String<TValue, TSpec> >::Type seqan::resize(String<TValue, TSpec>&, TSize, Tag<TUsage>) [with TValue = Stats; TSpec = Alloc<>; TSize = int; TExpand = TagGenerous_; typename Size<String<TValue, TSpec> >::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:1149:18:   required from 'typename seqan::Size<T>::Type seqan::resize(T&&, TSize) [with T = String<Stats>&; TSize = int; typename Size<T>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:986:11:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:98:8: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
   98 | struct Stats
      |        ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:98:8: warning: implicitly-declared 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >::Align(const seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >&)' is deprecated [-Wdeprecated-copy]
   98 | struct Stats
      |        ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> > >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/compute_gain.cpp:6:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: note: synthesized method 'Stats::Stats(Stats&&)' first required here
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 95%] Linking CXX executable ../../bin/dfi
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/dfi && /usr/bin/cmake -E cmake_link_script CMakeFiles/dfi.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/dfi.dir/dfi.cpp.o -o ../../bin/dfi  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target dfi
make  -f apps/fiona/CMakeFiles/fiona.dir/build.make apps/fiona/CMakeFiles/fiona.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona/CMakeFiles/fiona.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/fiona/CMakeFiles/fiona.dir/build.make apps/fiona/CMakeFiles/fiona.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/fiona/CMakeFiles/fiona.dir/fiona.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/fiona/CMakeFiles/fiona.dir/fiona.cpp.o -MF CMakeFiles/fiona.dir/fiona.cpp.o.d -o CMakeFiles/fiona.dir/fiona.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:117:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/parallel/base.h:36,
                 from /usr/include/c++/13/parallel/algobase.h:40,
                 from /usr/include/c++/13/parallel/algorithm:36,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:81:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:118:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 95%] Linking CXX executable ../../bin/compute_gain
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_gain.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/compute_gain.dir/compute_gain.cpp.o -o ../../bin/compute_gain  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target compute_gain
make  -f apps/fiona/CMakeFiles/fiona_illumina.dir/build.make apps/fiona/CMakeFiles/fiona_illumina.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona/CMakeFiles/fiona_illumina.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/fiona/CMakeFiles/fiona_illumina.dir/build.make apps/fiona/CMakeFiles/fiona_illumina.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/fiona/CMakeFiles/fiona_illumina.dir/fiona.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona && /usr/bin/c++ -DFIONA_ILLUMINA -DSEQAN_APP_VERSION=\"0.2.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/fiona/CMakeFiles/fiona_illumina.dir/fiona.cpp.o -MF CMakeFiles/fiona_illumina.dir/fiona.cpp.o.d -o CMakeFiles/fiona_illumina.dir/fiona.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:1636:34: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1636 | struct LessOverlap : public std::binary_function<TCorrection, TCorrection, bool >
      |                                  ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:1654:42: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1654 | struct LessPositionOverlap : public std::binary_function<TCorrection, TCorrection, bool >
      |                                          ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp: In function 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>)':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4410:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
 4410 |     if (options.verbosity >= 1)
      |     ^~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/profiling.h:82:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
   82 |     #define SEQAN_PROTIMESTART(a)       _proFloat a = sysTime()
      |                                         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4412:9: note: in expansion of macro 'SEQAN_PROTIMESTART'
 4412 |         SEQAN_PROTIMESTART(search);
      |         ^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:117:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/parallel/base.h:36,
                 from /usr/include/c++/13/parallel/algobase.h:40,
                 from /usr/include/c++/13/parallel/algorithm:36,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:81:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:115:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:578:18:   required from 'bool seqan::loadReadsNoNames(FragmentStore<TSpec, TConfig>&, TFileName&, const FionaOptions&) [with TFSSpec = void; TFSConfig = FionaStoreConfig; TFileName = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5438:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4635:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:142:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>, seqan::Array<4> >; TValue = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TTargetSpec = Array<4>; TValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>, Array<4> >&; TSource = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3574:32:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>, seqan::Array<4> >; TValue = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TTargetSpec = Array<4>; TValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>, Array<4> >&; TSource = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3582:24:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:578:18:   required from 'bool seqan::loadReadsNoNames(FragmentStore<TSpec, TConfig>&, TFileName&, const FionaOptions&) [with TFSSpec = void; TFSConfig = FionaStoreConfig; TFileName = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5438:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:578:18:   required from 'bool seqan::loadReadsNoNames(FragmentStore<TSpec, TConfig>&, TFileName&, const FionaOptions&) [with TFSSpec = void; TFSConfig = FionaStoreConfig; TFileName = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5438:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4635:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4635:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3475:19:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>*; TParam = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>*; TParam = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>, seqan::Array<4> >; TValue = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TTargetSpec = Array<4>; TValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>, Array<4> >&; TSource = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3574:32:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>*; TParam = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>*; TParam = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>, seqan::Array<4> >; TValue = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TTargetSpec = Array<4>; TValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>, Array<4> >&; TSource = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3582:24:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5002:23:   required from 'int writeOutput(unsigned int&, const TFragmentStore&, const FionaOptions&) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5611:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:578:18:   required from 'bool seqan::loadReadsNoNames(FragmentStore<TSpec, TConfig>&, TFileName&, const FionaOptions&) [with TFSSpec = void; TFSConfig = FionaStoreConfig; TFileName = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5438:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:118:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>; TString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:1636:34: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1636 | struct LessOverlap : public std::binary_function<TCorrection, TCorrection, bool >
      |                                  ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:1654:42: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1654 | struct LessPositionOverlap : public std::binary_function<TCorrection, TCorrection, bool >
      |                                          ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp: In function 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>)':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4410:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
 4410 |     if (options.verbosity >= 1)
      |     ^~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/profiling.h:82:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
   82 |     #define SEQAN_PROTIMESTART(a)       _proFloat a = sysTime()
      |                                         ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4412:9: note: in expansion of macro 'SEQAN_PROTIMESTART'
 4412 |         SEQAN_PROTIMESTART(search);
      |         ^~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:115:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:578:18:   required from 'bool seqan::loadReadsNoNames(FragmentStore<TSpec, TConfig>&, TFileName&, const FionaOptions&) [with TFSSpec = void; TFSConfig = FionaStoreConfig; TFileName = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5438:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4635:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:138:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_historyClear(Iter<TIndex, VSTree<TopDown<TSpec> > >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = Preorder]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:311:18:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1731:24: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 1731 |         it._parentDesc = value(it);
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:142:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>, seqan::Array<4> >; TValue = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TTargetSpec = Array<4>; TValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>, Array<4> >&; TSource = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3574:32:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>, seqan::Array<4> >; TValue = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TTargetSpec = Array<4>; TValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>, Array<4> >&; TSource = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3582:24:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:578:18:   required from 'bool seqan::loadReadsNoNames(FragmentStore<TSpec, TConfig>&, TFileName&, const FionaOptions&) [with TFSSpec = void; TFSConfig = FionaStoreConfig; TFileName = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5438:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:312:10:   required from 'void seqan::goRoot(Iter<Index<TText, IndexSa<TSpec> >, VSTree<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void; TSpec = TopDown<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:212:19:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:578:18:   required from 'bool seqan::loadReadsNoNames(FragmentStore<TSpec, TConfig>&, TFileName&, const FionaOptions&) [with TFSSpec = void; TFSConfig = FionaStoreConfig; TFileName = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5438:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4635:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4635:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h: In instantiation of 'void seqan::_clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2236:15:   required from 'void seqan::clear(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2259:22:   required from 'void seqan::goNextImpl(Iter<TIndex, VSTree<TopDown<ParentLinks<TSpec> > > >&, VSTreeIteratorTraits<Preorder_, THideEmptyEdges>) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = Preorder; THideEmptyEdges = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1660:19:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&, TTraits) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >; TTraits = Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:1655:15:   required from 'void seqan::goNext(Iter<TIndex, VSTree<TSpec> >&) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >, IndexSa<> >; TSpec = TopDown<ParentLinks<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3475:19:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:2230:19: warning: implicitly-declared 'constexpr seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >& seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >::operator=(const seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >&)' is deprecated [-Wdeprecated-copy]
 2230 |         value(it) = typename VertexDescriptor<TIndex>::Type(MinimalCtor());
      |         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:134:5: note: because 'seqan::VertexSA<long unsigned int, seqan::SimpleType<unsigned char, seqan::Dna5_> >' has user-provided 'seqan::VertexSA<TSize, TAlphabet>::VertexSA(const seqan::VertexSA<TSize, TAlphabet>&) [with TSize = long unsigned int; TAlphabet = seqan::SimpleType<unsigned char, seqan::Dna5_>]'
  134 |     VertexSA(VertexSA const & other) :
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>*; TParam = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>*; TParam = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>, seqan::Array<4> >; TValue = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TTargetSpec = Array<4>; TValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>, Array<4> >&; TSource = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3574:32:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>*; TParam = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>*; TParam = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>, seqan::Array<4> >; TValue = seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>; TTargetSpec = Array<4>; TValue = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>, Array<4> >&; TSource = Segment<const Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:3582:24:   required from 'void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan::String<TEmission>&, seqan::String<TCargo>&, FionaOptions&, seqan::Tag<TUsage>, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan::Iter<seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<> > > >; TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4893:41:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>::Segment(const seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = const seqan::Range<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >*>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5002:23:   required from 'int writeOutput(unsigned int&, const TFragmentStore&, const FionaOptions&) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5611:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:578:18:   required from 'bool seqan::loadReadsNoNames(FragmentStore<TSpec, TConfig>&, TFileName&, const FionaOptions&) [with TFSSpec = void; TFSConfig = FionaStoreConfig; TFileName = String<char, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5438:26:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:218:12:   required from 'void seqan::_createSuffixArrayPipelining(TSA&, const StringSet<TSequence, TSpec>&, TAlgSpec) [with TSA = Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>; TString = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:173:37:   required from 'void seqan::_createSuffixArrayWrapper(TSA&, const StringSet<TSequence, TSpec>&, const TAlgSpec&, True) [with TSA = Range<Pair<unsigned int, short unsigned int, Tag<Pack_> >*>; TSequence = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSetSpec = Owner<>; TAlgSpec = Skew7]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:198:34:   [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_aggregate.h:58,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:414:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:415:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:432:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:443:21:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:243:12:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   required from 'seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::Pipe(TInput&, const TLimitsString_&, typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type*) [with TLimitsString_ = seqan::String<long unsigned int, seqan::Alloc<> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >; typename seqan::EnableIf<seqan::IsSameType<TLimitsString, TLimitsString_> >::Type = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:107:22:   [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:416:33:   required from 'bool seqan::_skew7ExtendMulti(TTextInput&, const TLimitsString&, TNameInput&, TNameInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pipe<ConcatenatorManyToOne<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> > >, Source<> >, Caster<SimpleType<unsigned char, Dna5_>, CasterReinterpret> >; TLimitsString = String<long unsigned int, Alloc<> >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 4, BitPacked<> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 5, BitPacked<> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:350:34:   required from 'bool seqan::Pipe<TInput, seqan::Multi<seqan::Skew7, TPair, TLimitsString> >::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TInput = seqan::Pipe<seqan::Pipe<seqan::ConcatenatorManyToOne<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> > >, seqan::Source<> >, seqan::Caster<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::CasterReinterpret> >; TPair_ = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:294:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:161:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:162:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:179:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:190:17:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::end() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:633:42:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::end() [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:904:28:   required from 'bool seqan::Pool<TValue, TSpec>::endWrite() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:786:13:   required from 'seqan::Pool<TValue, TSpec>::~Pool() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:173:12:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   required from 'seqan::Pipe<TInput, seqan::Skew7>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:367:49:   [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:534:34: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  534 |                         *cb->cur = pool.undefinedValue;
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender7.h:163:29:   required from 'bool seqan::_skew7Extend(TTextInput&, TNameInput&, TOut0&, TOut3&, TOut5&, TOut6&, TOut124&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<filterI1<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 3, int>, long unsigned int, File<Async<> > > > >; TOut3 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut5 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 4, Tag<Pack_> >, Tag<Pack_> >, 1, int>, long unsigned int, File<Async<> > > > >; TOut6 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew7ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 5, Tag<Pack_> >, Tag<Pack_> >, 2, int>, long unsigned int, File<Async<> > > > >; TOut124 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:362:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew7>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::filterI1<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:312:20:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::WriteFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:123:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   required from 'seqan::Pipe<TInput, seqan::Skew3>::Pipe(TInput&) [with TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:376:49:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:762:18: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  762 |             *cur = Val_;
      |             ~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<Pair<unsigned int, short unsigned int, Tag<Pack_> >, Tuple<long unsigned int, 3, void>, Tuple<SimpleType<unsigned char, Dna5_>, 6, BitPacked<> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:447:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7Multi<TLimitsString> >::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 4, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 5, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TLimitsString = seqan::String<long unsigned int, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:465:13:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = seqan::Pair<unsigned int, short unsigned int, seqan::Tag<seqan::Pack_> >; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<seqan::SimpleType<unsigned char, seqan::Dna5_>, 6, seqan::BitPacked<> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<TBufferHandler, seqan::MapperMemAdapter>::push(const TValue&) [with TBufferHandler = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:622:44:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:311:44: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  311 |             buffer[pool.handlerArgs(Val_)] = Val_;
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'void seqan::Handler<seqan::Pool<TValue, seqan::MapperSpec<TConfig> >, seqan::MapperAsyncWriter>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TConfig = seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:623:43:   required from 'void seqan::Handler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::push(const TValue&) [with THandler1 = seqan::Handler<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::MapperMemAdapter>; THandler2 = seqan::Handler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::MapperAsyncWriter>; TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:881:25:   required from 'void seqan::Pool<TValue, TSpec>::push(const TValue&) [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:1167:16:   required from 'void seqan::push(Pool<TValue, TPoolSpec>&, const TValue&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TSpec = MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pump_extender3.h:101:17:   required from 'bool seqan::_skew3Extend(TTextInput&, TNameInput&, TOut0&, TOut12&) [with TTextInput = Pipe<Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew7NMapSliced<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >, Filter<filterI2<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int> > >; TNameInput = Pool<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapLinear<Pair<long unsigned int, long unsigned int, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >; TOut0 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, SorterSpec<SorterConfigSize<_skew3ExtendComp<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, int>, long unsigned int, File<Async<> > > > >; TOut12 = Pool<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, MapperSpec<MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:269:29:   required from 'bool seqan::Pipe<TInput, seqan::Skew3>::process(TInput_&) [with TInput_ = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >; TInput = seqan::Pipe<seqan::Pool<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapSliced<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Filter<seqan::filterI2<seqan::Pair<long unsigned int, long unsigned int, seqan::Tag<seqan::Pack_> >, long unsigned int> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:218:20:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:517:21: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  517 |             *cb.cur = item;
      |             ~~~~~~~~^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >; TConfig = MapperConfigSize<_skew7NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 3, void>, Tuple<long unsigned int, 6, Tag<Pack_> >, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:302:21:   required from 'void seqan::Pipe<seqan::Bundle5<TIn1, TIn2, TIn3, TIn4, TIn5>, seqan::Merger7>::insertStream(unsigned int) [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 3, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput3 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput5 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 4, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 1, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput6 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew7ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 5, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, 2, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput124 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew7NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:320:13:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 3, void>, seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 3, void>; T3 = seqan::Tuple<long unsigned int, 6, seqan::Tag<seqan::Pack_> >]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h: In instantiation of 'seqan::Buffer<TValue>& seqan::processBuffer(Buffer<TValue, PageFrame<typename TConfig::File, Dynamic> >&, BufferHandler<Pool<TValue, MapperSpec<TConfig> >, Tag<ReadFileSpec_> >&) [with TValue = Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >; TConfig = MapperConfigSize<_skew3NMapExtended<Triple<long unsigned int, Tuple<long unsigned int, 2, void>, Tuple<long unsigned int, 2, void>, Tag<Pack_> >, long unsigned int>, long unsigned int, File<Async<> > >; typename TConfig::File = File<Async<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:332:33:   required from 'seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::TBuffer& seqan::BufferHandler<seqan::Pool<TValue, TPoolSpec>, seqan::Tag<seqan::ReadFileSpec_> >::next() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:556:50:   required from 'seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::TBuffer seqan::BufferHandler<seqan::Bundle2<TInput1, TInput2>, seqan::Tag<seqan::MultiplexSpec_> >::next() [with TBufferHandler1 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >; TBufferHandler2 = seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> >; TBuffer = seqan::Buffer<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_base.h:744:38:   required from 'void seqan::Handler<TBufferHandler, seqan::AdapterSpec>::pop() [with TBufferHandler = seqan::BufferHandler<seqan::Bundle2<seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::MemorySpec_> >, seqan::BufferHandler<seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >, seqan::Tag<seqan::ReadFileSpec_> > >, seqan::Tag<seqan::MultiplexSpec_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_base.h:870:24:   required from 'seqan::Pool<TValue, TSpec>& seqan::Pool<TValue, TSpec>::operator++() [with TValue = seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >; TSpec = seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger3.h:111:17:   required from 'seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>& seqan::Pipe<seqan::Bundle2<TInput1, TInput2>, seqan::Merger3>::operator++() [with TInput0 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::SorterSpec<seqan::SorterConfigSize<seqan::_skew3ExtendComp<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, int>, long unsigned int, seqan::File<seqan::Async<> > > > >; TInput12 = seqan::Pool<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, seqan::MapperSpec<seqan::MapperConfigSize<seqan::_skew3NMapExtended<seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >, long unsigned int>, long unsigned int, seqan::File<seqan::Async<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:329:13:   [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:726:27:   required from 'bool seqan::indexRequire(Index<TObject, TSpec>&, Tag<TExpand>) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TSpec = IndexSa<>; TFibre = FibreSA_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_stree.h:195:17:   required from 'void seqan::_indexRequireTopDownIteration(Index<TText, IndexSa<TSpec> >&) [with TText = StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Owner<> >; TIndexSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:211:42:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<TSpec> > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_esa_stree.h:349:25:   required from 'seqan::Iter<TIndex, seqan::VSTree<seqan::TopDown<seqan::ParentLinks<TSpec> > > >::Iter(TIndex&) [with TIndex = seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Owner<> >, seqan::IndexSa<> >; TSpec = seqan::Preorder]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:4874:24:   required from 'unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan::Tag<TagSpec>) [with TFragmentStore = seqan::FragmentStore<void, FionaStoreConfig>; TAlgorithm = FionaPoisson_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/fiona.cpp:5533:44:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:202:30: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  202 |                     *refNext = *I;
      |                     ~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:203:24: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  203 |                     *I = *refPrev;
      |                     ~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:243:26: warning: implicitly-declared 'constexpr seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >& seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >::operator=(const seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >&)' is deprecated [-Wdeprecated-copy]
  243 |                     *cur = *refPrev;
      |                     ~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/triple_packed.h:82:12: note: because 'seqan::Triple<long unsigned int, seqan::Tuple<long unsigned int, 2, void>, seqan::Tuple<long unsigned int, 2, void>, seqan::Tag<seqan::Pack_> >' has user-provided 'seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >::Triple(const seqan::Triple<T1, T2, T3, seqan::Tag<seqan::Pack_> >&) [with T1 = long unsigned int; T2 = seqan::Tuple<long unsigned int, 2, void>; T3 = seqan::Tuple<long unsigned int, 2, void>]'
   82 |     inline Triple(Triple const &_p)
      |            ^~~~~~
[ 95%] Linking CXX executable ../../bin/fiona
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona && /usr/bin/cmake -E cmake_link_script CMakeFiles/fiona.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/fiona.dir/fiona.cpp.o -o ../../bin/fiona  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target fiona
make  -f apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build.make apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build.make apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o -MF CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o.d -o CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_bam_coverage.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_bam_coverage.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_bam_coverage.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_bam_coverage.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_bam_coverage.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 95%] Linking CXX executable ../../bin/fiona_illumina
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona && /usr/bin/cmake -E cmake_link_script CMakeFiles/fiona_illumina.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/fiona_illumina.dir/fiona.cpp.o -o ../../bin/fiona_illumina  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target fiona_illumina
make  -f apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build.make apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build.make apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o -MF CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o.d -o CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_fastq_stats.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_fastq_stats.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/stl_tree.h:65,
                 from /usr/include/c++/13/map:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_fastq_stats.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_fastq_stats.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_fastq_stats.cpp:290:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_fastq_stats.cpp:290:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_fastq_stats.cpp:290:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_fastq_stats.cpp:290:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools/fx_fastq_stats.cpp:290:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 95%] Linking CXX executable ../../bin/fx_bam_coverage
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/fx_bam_coverage.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o -o ../../bin/fx_bam_coverage  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target fx_bam_coverage
make  -f apps/gustaf/CMakeFiles/gustaf.dir/build.make apps/gustaf/CMakeFiles/gustaf.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf/CMakeFiles/gustaf.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/gustaf/CMakeFiles/gustaf.dir/build.make apps/gustaf/CMakeFiles/gustaf.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/gustaf/CMakeFiles/gustaf.dir/gustaf.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/gustaf/CMakeFiles/gustaf.dir/gustaf.cpp.o -MF CMakeFiles/gustaf.dir/gustaf.cpp.o.d -o CMakeFiles/gustaf.dir/gustaf.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:28,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf.cpp:27:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf.cpp:24:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seeds.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_types.h:155:32: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  155 | struct LessPos : public ::std::binary_function <TMatch, TMatch, bool> {
      |                                ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_types.h:207:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  207 | struct LessLength : public ::std::binary_function <TMatch, TMatch, bool> {
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 95%] Linking CXX executable ../../bin/fx_fastq_stats
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/fx_fastq_stats.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o -o ../../bin/fx_fastq_stats  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target fx_fastq_stats
make  -f apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build.make apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build.make apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o -MF CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o.d -o CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/parse_lm.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/create_stellarmatches_from_file.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_parse_options.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf.cpp:28:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h: In instantiation of 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:677:47: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  677 |                 Segment<TInfix, InfixSegment> finderSegment(finderInfixSeq,
      |                                               ^~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf.cpp:25:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:690:74: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  690 |                 Segment<typename Infix<TPatternSeq>::Type, InfixSegment> patternSegment(patternInfixSeq,
      |                                                                          ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:102:46: note:   initializing argument 1 of 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
  102 |     Segment(typename Parameter_<THost>::Type _host, typename Position<THost>::Type _begin_index, typename Position<THost>::Type _end_index):
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:35:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:103:29:   required from 'seqan::Segment<THost_, seqan::InfixSegment>::Segment(typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type, typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Parameter_<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; typename seqan::Position<typename seqan::Host<seqan::Segment<THost_, seqan::InfixSegment> >::Type>::Type = long unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:677:33:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h: In instantiation of 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:194:24: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  194 |                 TAlign ali(align);
      |                        ^~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:97:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_out.h:1054:14:   required from 'bool _writeGlobalBreakpoints(seqan::String<TString>&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TId>&, const MSplazerOptions&, seqan::Vcf) [with TBreakpoint = Breakpoint<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::Vcf = seqan::Tag<seqan::Vcf_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:283:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf_matepairs.h:143:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, bool, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::String<unsigned int, seqan::Alloc<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:71:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_smart_pointer.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_allocator.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<const T>::Type seqan::_toParameter(const T&) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Parameter_<const T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:202:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(const Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:577:88:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:365:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  365 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_out.h:356:14:   required from 'bool _writeGlobalBreakpoints(seqan::String<TString>&, const MSplazerOptions&, seqan::Gff) [with TBreakpoint = Breakpoint<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >; seqan::Gff = seqan::Tag<seqan::TagGff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:282:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf_matepairs.h:143:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, bool, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::String<unsigned int, seqan::Alloc<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:71:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_out.h:356:14:   required from 'bool _writeGlobalBreakpoints(seqan::String<TString>&, const MSplazerOptions&, seqan::Gff) [with TBreakpoint = Breakpoint<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >; seqan::Gff = seqan::Tag<seqan::TagGff_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:282:28:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf_matepairs.h:143:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, bool, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::String<unsigned int, seqan::Alloc<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:71:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:190:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h: In instantiation of 'void seqan::_alignBandedSmithWatermanDeclump(LocalAlignmentFinder<TScoreValue>&, const TSequenceH&, const TSequenceV&, const TScore&, TScoreValue, TDiagonal, TDiagonal) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:570:37:   required from 'TScoreValue seqan::_localAlignmentNext(LocalAlignmentFinder<TScoreValue>&, Gaps<TSource, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const TScore&, TScoreValue, TDiagonal, TDiagonal, const BandedWatermanEggert&) [with TScoreValue = int; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>; TScore = Score<int, Tag<Simple_> >; TDiagonal = int; BandedWatermanEggert = Tag<BandedWatermanEggert_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:109:35:   required from 'bool seqan::nextLocalAlignment(Gaps<TSequenceV, TGapsSpecV>&, Gaps<TSequenceV, TGapsSpecV>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequenceH = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TGapsSpecV = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_enumeration_banded.h:121:30:   required from 'bool seqan::nextLocalAlignment(Align<TSequence, TAlignSpec>&, LocalAlignmentEnumerator<Score<TValue, TSpec>, Tag<Banded_> >&) [with TScoreValue = int; TScoreSpec = Tag<Simple_>; TSequence = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TAlignSpec = Tag<ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:607:30:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h:287:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  287 |             matIt2 = matIt - diagonalWidth;
      |             ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::Matrix<int>, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::Matrix<int>]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:105:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::_toParameter(T&) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:195:32:   required from 'typename seqan::Parameter_<T>::Type seqan::host(Segment<THost_, InfixSegment>&) [with THost_ = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_extension.h:773:28:   required from 'void integrateAlign(seqan::Align<TSource, TSpec>&, const seqan::Align<seqan::Segment<seqan::Segment<THost_, seqan::InfixSegment>, seqan::InfixSegment>, TSpec2>&) [with TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSpec1 = seqan::Tag<seqan::ArrayGaps_>; TSpec2 = seqan::Tag<seqan::ArrayGaps_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_extension.h:801:19:   required from 'bool _extendAndExtract(const seqan::Align<seqan::Segment<seqan::Segment<TSequence, seqan::InfixSegment>, seqan::InfixSegment> >&, TScoreValue, const TScore&, const seqan::Segment<typename seqan::Infix<TText>::Type, seqan::InfixSegment>&, const seqan::Segment<typename seqan::Infix<TText>::Type, seqan::InfixSegment>&, seqan::ExtensionDirection, TSize, TEps, TAlign&) [with TScoreValue = int; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSize = int; TEps = double; TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >; typename seqan::Infix<TText>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_type.h:358:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  358 |     return _object;
      |            ^~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TCargo>&, const Graph<TSpec>&, const TPropertyMap&, TVertexDescriptor&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<unsigned int, unsigned int>, StorePointsOnly>, Alloc<> >; TVertexDescriptor = unsigned int; TValue = unsigned int; TCargo = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1532:18:   required from 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<unsigned int, unsigned int>, StorePointsOnly>, Alloc<> >; TValue = unsigned int; TCargo = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1513:18:   required from 'void seqan::findIntervals(String<TValue>&, const IntervalTree<TValue, TCargo>&, TValue2, TValue2) [with TValue = unsigned int; TCargo = unsigned int; TValue2 = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf_matepairs.h:255:18:   required from 'bool _checkRightMateMatches(const TMatch&, const seqan::String<TString>&, const TMSplazerChain&, const MSplazerOptions&) [with TMatch = StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >; TMSplazerChain = MSplazerChain<seqan::Graph<seqan::Directed<int> >, unsigned int, seqan::String<int>, SparsePropertyMap<Breakpoint<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >, unsigned int>, seqan::String<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf_matepairs.h:294:42:   required from 'bool _checkMateMatches(const TMatch&, const seqan::String<TString>&, const TMSplazerChain&, const MSplazerOptions&) [with TMatch = StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >; TMSplazerChain = MSplazerChain<seqan::Graph<seqan::Directed<int> >, unsigned int, seqan::String<int>, SparsePropertyMap<Breakpoint<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >, unsigned int>, seqan::String<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf_matepairs.h:458:35:   required from 'void _initialiseGraphMatePairs(QueryMatches<StellarMatch<TSequence, TId> >&, TId&, TMSplazerChain&, const MSplazerOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TMSplazerChain = MSplazerChain<seqan::Graph<seqan::Directed<int> >, unsigned int, seqan::String<int>, SparsePropertyMap<Breakpoint<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >, unsigned int>, seqan::String<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_algorithms.h:840:42:   required from 'void _chainQueryMatches(seqan::StringSet<QueryMatches<StellarMatch<TSequence, TId> > >&, seqan::String<TCargo>&, seqan::String<TEmission>&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::String<unsigned int, seqan::Alloc<> >&, const MSplazerOptions&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TScoreAlloc = seqan::String<int>; TMSplazerChain = MSplazerChain<seqan::Graph<seqan::Directed<int> >, unsigned int, seqan::String<int>, SparsePropertyMap<Breakpoint<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >, unsigned int>, seqan::String<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > >, seqan::Alloc<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:230:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1562:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1562 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<unsigned int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1575:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1575 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<unsigned int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1598:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1598 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<unsigned int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<unsigned int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf_matepairs.h:143:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, bool, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::String<unsigned int, seqan::Alloc<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:71:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:395:16:   required from 'typename seqan::Needle<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::needle(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >; TSpec = Swift<Tag<SwiftLocal_> >; typename Needle<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Dependent<Tag<TagInsist_> > >, IndexQGram<UngappedShape<0>, Tag<OpenAddressing_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:687:78:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram_openaddressing.h:143:9: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >, seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> > >' has user-provided 'seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >::Index(const seqan::Index<TObject, seqan::IndexQGram<TShapeSpec, seqan::Tag<seqan::OpenAddressing_> > >&) [with TObject = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Dependent<seqan::Tag<seqan::TagInsist_> > >; TShapeSpec = seqan::UngappedShape<0>]'
  143 |         Index(Index const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/gustaf_matepairs.h:143:14:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, bool, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::String<unsigned int, seqan::Alloc<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:71:30:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >*; TParam = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >*; TParam = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >, seqan::Alloc<> >; TValue = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >; TTargetSpec = Alloc<>; TValue = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = String<Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >, Alloc<> >&; TSource = Align<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<ArrayGaps_> >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:217:28:   required from 'void _splitAtXDrops(TAlign&, seqan::Score<TScoreValue, seqan::Tag<seqan::Simple_> >&, TScoreValue1, TScoreValue2, seqan::String<TString>&) [with TAlign = seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >; TScoreValue = int; TScoreValue1 = int; TScoreValue2 = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:614:23:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >::Align(const seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/align_base.h:104:13: note: because 'seqan::Align<seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>, seqan::Tag<seqan::ArrayGaps_> >' has user-provided 'seqan::Align<TSource, TSpec>& seqan::Align<TSource, TSpec>::operator=(const seqan::Align<TSource, TSpec>&) [with TSource = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ArrayGaps_>]'
  104 |     Align & operator=(Align const & other)
      |             ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>*; TParam = const Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>, Tag<Tristate_> >; TValue = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Value<TContext>::Type = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TValue2 = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:427:10:   required from 'void seqan::assignSource(Gaps<TSequence, Tag<ArrayGaps_> >&, const TSequence2&) [with TSequence = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>; TSequence2 = Segment<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:604:17:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h: In instantiation of 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   required from 'void seqan::appendValue(TContainer&&, TSource&&) [with TContainer = StringSet<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Owner<> >&; TSource = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_extension.h:396:13:   required from 'void _fillMatrixBestEndsLeft(TMatrix&, seqan::String<TValue>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, const seqan::Segment<TSequence, seqan::InfixSegment>&, TSeed&, TSeed&, const TScore&) [with TMatrix = seqan::String<seqan::SimpleType<unsigned char, seqan::TraceBack_> >; TPossEnd = ExtensionEndPosition<long unsigned int>; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_extension.h:697:26:   required from 'bool _bestExtension(const TInfix&, const TInfix&, TSeed&, TSeed&, TPos, TPos, const TScore&, TDir, TSize, TEps, TAlign&) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TPos = long unsigned int; TDir = seqan::ExtensionDirection; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TSize = int; TEps = double; TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_extension.h:852:22:   required from 'bool _extendAndExtract(const seqan::Align<seqan::Segment<seqan::Segment<TSequence, seqan::InfixSegment>, seqan::InfixSegment> >&, TScoreValue, const TScore&, const seqan::Segment<typename seqan::Infix<TText>::Type, seqan::InfixSegment>&, const seqan::Segment<typename seqan::Infix<TText>::Type, seqan::InfixSegment>&, seqan::ExtensionDirection, TSize, TEps, TAlign&) [with TScoreValue = int; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSize = int; TEps = double; TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >; typename seqan::Infix<TText>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1342:26: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1342 |             TTargetValue temp_copy(std::forward<TValue>(_value)); //temp copy because resize could invalidate _value
      |                          ^~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1348:31:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_extension.h:697:26:   required from 'bool _bestExtension(const TInfix&, const TInfix&, TSeed&, TSeed&, TPos, TPos, const TScore&, TDir, TSize, TEps, TAlign&) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TPos = long unsigned int; TDir = seqan::ExtensionDirection; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TSize = int; TEps = double; TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_extension.h:852:22:   required from 'bool _extendAndExtract(const seqan::Align<seqan::Segment<seqan::Segment<TSequence, seqan::InfixSegment>, seqan::InfixSegment> >&, TScoreValue, const TScore&, const seqan::Segment<typename seqan::Infix<TText>::Type, seqan::InfixSegment>&, const seqan::Segment<typename seqan::Infix<TText>::Type, seqan::InfixSegment>&, seqan::ExtensionDirection, TSize, TEps, TAlign&) [with TScoreValue = int; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSize = int; TEps = double; TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >; typename seqan::Infix<TText>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1354:27:   required from 'static void seqan::AppendValueToString_<TExpand>::appendValue_(T&, TValue&&) [with T = seqan::String<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Alloc<> >; TValue = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&; TExpand = seqan::Tag<seqan::TagGenerous_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1366:54:   required from 'void seqan::appendValue(String<TValue, TSpec>&, TValue&&, Tag<TUsage>) [with TTargetValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTargetSpec = Alloc<>; TValue = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:174:16:   required from 'void seqan::appendValue(StringSet<TString, Owner<> >&, const TString2&, Tag<TExpand>) [with TString = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TString2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TExpand = TagGenerous_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:937:16:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_extension.h:697:26:   required from 'bool _bestExtension(const TInfix&, const TInfix&, TSeed&, TSeed&, TPos, TPos, const TScore&, TDir, TSize, TEps, TAlign&) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSeed = seqan::Seed<seqan::Tag<seqan::Simple_> >; TPos = long unsigned int; TDir = seqan::ExtensionDirection; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TSize = int; TEps = double; TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar_extension.h:852:22:   required from 'bool _extendAndExtract(const seqan::Align<seqan::Segment<seqan::Segment<TSequence, seqan::InfixSegment>, seqan::InfixSegment> >&, TScoreValue, const TScore&, const seqan::Segment<typename seqan::Infix<TText>::Type, seqan::InfixSegment>&, const seqan::Segment<typename seqan::Infix<TText>::Type, seqan::InfixSegment>&, seqan::ExtensionDirection, TSize, TEps, TAlign&) [with TScoreValue = int; TScore = seqan::Score<int, seqan::Tag<seqan::Simple_> >; TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TSize = int; TEps = double; TAlign = seqan::Align<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::Tag<seqan::ArrayGaps_> >; typename seqan::Infix<TText>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:633:26:   required from 'void verifySwiftHit(const seqan::Segment<THost_, seqan::InfixSegment>&, const seqan::Segment<THost_, seqan::InfixSegment>&, TEpsilon, TSize, TDrop, TDelta, TSize1, TSize1&, TSize1, TId&, bool, QueryMatches<StellarMatch<TSource, TId> >&, TTag) [with TInfix = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TEpsilon = double; TSize = int; TDelta = unsigned int; TDrop = double; TSize1 = unsigned int; TId = seqan::String<char, seqan::Alloc<> >; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/../stellar/stellar.h:705:17:   required from 'void stellar(seqan::Finder<TText, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, seqan::Pattern<seqan::Index<seqan::StringSet<TString, TSpec>, TSpec>, seqan::Swift<seqan::Tag<seqan::SwiftLocal_> > >&, double, TSize, TDrop, TSize1, TSize1&, TSize1, TMode, TId&, bool, seqan::StringSet<QueryMatches<StellarMatch<TSource, TId> > >&, TTag) [with TText = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TStringSetSpec = seqan::Dependent<seqan::Tag<seqan::TagInsist_> >; TIndexSpec = seqan::IndexQGram<seqan::UngappedShape<0>, seqan::Tag<seqan::OpenAddressing_> >; TSize = int; TDrop = double; TSize1 = unsigned int; TMode = bool; TSource = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; TTag = seqan::Tag<VerifyAllLocal_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/stellar_routines.h:197:20:   required from 'void _getStellarMatches(seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, StellarOptions&, TMatches&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TMatches = seqan::StringSet<QueryMatches<StellarMatch<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::String<char, seqan::Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/msplazer_main.h:146:27:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:196:26:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, bool, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::String<unsigned int, seqan::Alloc<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:437:25:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:196:26:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, bool, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::String<unsigned int, seqan::Alloc<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:437:25:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:196:26:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, bool, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::String<unsigned int, seqan::Alloc<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:437:25:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:330:27:   required from 'int _writeSequences(seqan::CharString&, const seqan::StringSet<TString, seqan::Owner<> >&, const seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, const seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:439:24:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagFastq_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:196:26:   required from 'bool _importSequences(const seqan::CharString&, const seqan::CharString&, bool, seqan::StringSet<TString, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<TString2, seqan::Owner<> >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::String<unsigned int, seqan::Alloc<> >&) [with TSequence = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >; TId = seqan::String<char, seqan::Alloc<> >; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/join_mates.cpp:437:25:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = long unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const long unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = long unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 95%] Linking CXX executable ../../bin/gustaf_mate_joining
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf && /usr/bin/cmake -E cmake_link_script CMakeFiles/gustaf_mate_joining.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o -o ../../bin/gustaf_mate_joining  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target gustaf_mate_joining
make  -f apps/insegt/CMakeFiles/insegt.dir/build.make apps/insegt/CMakeFiles/insegt.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/insegt /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/insegt/CMakeFiles/insegt.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/insegt/CMakeFiles/insegt.dir/build.make apps/insegt/CMakeFiles/insegt.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/insegt/CMakeFiles/insegt.dir/insegt.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/insegt && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.1.10\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/insegt/CMakeFiles/insegt.dir/insegt.cpp.o -MF CMakeFiles/insegt.dir/insegt.cpp.o.d -o CMakeFiles/insegt.dir/insegt.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:14:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:1:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:16:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:17:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:20:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/create_gff.h: In instantiation of 'void seqan::createReadCountGFF(TFile&, TReadAnnoStore&, FragmentStore<TSpec, TConfig>&) [with TFile = std::basic_fstream<char>; TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:889:23:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/create_gff.h:75:35: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
   75 |                         itAnnoIds = begin(getValue(itCountStore).annoIds);
      |                         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:12:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/create_gff.h:76:38: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
   76 |                         itAnnoIdsEnd = end(getValue(itCountStore).annoIds);
      |                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/create_gff.h:100:43: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  100 |                                 itAnnoIds = begin(getValue(itCountStore).annoIds);
      |                                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/create_gff.h:101:46: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  101 |                                 itAnnoIdsEnd = end(getValue(itCountStore).annoIds);
      |                                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/create_gff.h:134:51: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  134 |                                         itAnnoIds = begin(getValue(itCountStore).annoIds);
      |                                         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/create_gff.h:135:54: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  135 |                                         itAnnoIdsEnd = end(getValue(itCountStore).annoIds);
      |                                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/create_gff.h:169:43: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  169 |                                 itAnnoIds = begin(getValue(itCountStore).annoIds);
      |                                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/create_gff.h:170:46: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  170 |                                 itAnnoIdsEnd = end(getValue(itCountStore).annoIds);
      |                                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h: In instantiation of 'seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> > seqan::nodeDown(const Iter<TFragmentStore, AnnotationTree<TSpec> >&) [with TFragmentStore = FragmentStore<>; TSpec = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:48:64:   required from 'void seqan::adjustParentEntries(FragmentStore<TSpec, TConfig>&) [with TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:851:21:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:853:50: warning: implicitly-declared 'constexpr seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >::Iter(const seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >&)' is deprecated [-Wdeprecated-copy]
  853 |     Iter<TFragmentStore, AnnotationTree<TSpec> > tmp(it);
      |                                                  ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:272:5: note: because 'seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >' has user-provided 'const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >& seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >::operator=(const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >&) [with TFragmentStore = seqan::FragmentStore<>; TSpec = void]'
  272 |     operator = (Iter const &_origin)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:855:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >::Iter(const seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >&)' is deprecated [-Wdeprecated-copy]
  855 |     return tmp;
      |            ^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_annotation.h:272:5: note: because 'seqan::Iter<seqan::FragmentStore<>, seqan::AnnotationTree<> >' has user-provided 'const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >& seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >::operator=(const seqan::Iter<TFragmentStore, seqan::AnnotationTree<TSpec> >&) [with TFragmentStore = seqan::FragmentStore<>; TSpec = void]'
  272 |     operator = (Iter const &_origin)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:22:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h: In instantiation of 'void seqan::getIdsForRead(TAnnoIds&, FragmentStore<TSpec, TConfig>&, TIntervalTree&, TIntervals&, unsigned int) [with TAnnoIds = StringSet<String<unsigned int, Alloc<> >, Owner<> >; TSpec = void; TConfig = FragmentStoreConfig<void>; TIntervalTree = IntervalTree<long int, unsigned int>; TIntervals = String<Interval<unsigned int>, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:754:18:   required from 'void seqan::getResults_Fusion(TReadAnnoStore&, TAnnoCountStore&, TTupleCountStore&, TTupleCountStore_Fusion&, FragmentStore<TSpec, TConfig>&, unsigned int, bool, unsigned int, unsigned int, bool) [with TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >; TAnnoCountStore = String<unsigned int, Alloc<> >; TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TTupleCountStore_Fusion = String<TupleCountStoreElement_Fusion<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:870:20:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:90:13: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
   90 |         itR = begin(ids);
      |         ~~~~^~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h: In instantiation of 'void seqan::buildAnnoCountStore(TAnnoCountStore&, FragmentStore<TSpec, TConfig>&, TReadAnnoStore&) [with TAnnoCountStore = String<unsigned int, Alloc<> >; TSpec = void; TConfig = FragmentStoreConfig<void>; TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:760:21:   required from 'void seqan::getResults_Fusion(TReadAnnoStore&, TAnnoCountStore&, TTupleCountStore&, TTupleCountStore_Fusion&, FragmentStore<TSpec, TConfig>&, unsigned int, bool, unsigned int, unsigned int, bool) [with TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >; TAnnoCountStore = String<unsigned int, Alloc<> >; TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TTupleCountStore_Fusion = String<TupleCountStoreElement_Fusion<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:870:20:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:536:51: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  536 |                                         itAnnoIds = begin(getValue(itRead).annoIds);
      |                                         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:537:54: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  537 |                                         itAnnoIdsEnd = end(getValue(itRead).annoIds);
      |                                         ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:21:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h: In instantiation of 'void seqan::buildTupleCountStore_Fusion(TTupleCountStore&, TTupleCountStore_Fusion&, FragmentStore<TSpec, TConfig>&, TReadAnnoStore&, unsigned int, bool) [with TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TTupleCountStore_Fusion = String<TupleCountStoreElement_Fusion<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>; TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:761:29:   required from 'void seqan::getResults_Fusion(TReadAnnoStore&, TAnnoCountStore&, TTupleCountStore&, TTupleCountStore_Fusion&, FragmentStore<TSpec, TConfig>&, unsigned int, bool, unsigned int, unsigned int, bool) [with TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >; TAnnoCountStore = String<unsigned int, Alloc<> >; TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TTupleCountStore_Fusion = String<TupleCountStoreElement_Fusion<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:870:20:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:191:92: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  191 |                                                                                 itSecTuple = begin(tempSecTupleSet);
      |                                                                                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:192:95: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  192 |                                                                                 itSecTupleEnd = end(tempSecTupleSet);
      |                                                                                 ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:208:57: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  208 |                                                 itTuple = begin(tupleSet);
      |                                                 ~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:209:60: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  209 |                                                 itTupleEnd = end(tupleSet);
      |                                                 ~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:238:76: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  238 |                                                                 itSecTuple = begin(secTupleSet);
      |                                                                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:239:79: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  239 |                                                                 itSecTupleEnd = end(secTupleSet);
      |                                                                 ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:291:57: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  291 |                                                 itTuple = begin(tupleSet);
      |                                                 ~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:292:60: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  292 |                                                 itTupleEnd = end(tupleSet);
      |                                                 ~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:298:68: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  298 |                                                         itSecTuple = begin(secTupleSet);
      |                                                         ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:299:71: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  299 |                                                         itSecTupleEnd = end(secTupleSet);
      |                                                         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h: In instantiation of 'void seqan::buildTupleCountStore(TTupleCountStore&, FragmentStore<TSpec, TConfig>&, TReadAnnoStore&, unsigned int, bool) [with TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>; TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:624:22:   required from 'void seqan::getResults(TReadAnnoStore&, TAnnoCountStore&, TTupleCountStore&, FragmentStore<TSpec, TConfig>&, unsigned int, bool, unsigned int, unsigned int, bool) [with TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >; TAnnoCountStore = String<unsigned int, Alloc<> >; TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:872:13:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:354:57: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  354 |                                                 itTuple = begin(tupleSet);
      |                                                 ~~~~~~~~^~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:355:60: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  355 |                                                 itTupleEnd = end(tupleSet);
      |                                                 ~~~~~~~~~~~^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:384:76: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  384 |                                                                 itSecTuple = begin(secTupleSet);
      |                                                                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:385:79: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
  385 |                                                                 itSecTupleEnd = end(secTupleSet);
      |                                                                 ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:13:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:19:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/base.h: In instantiation of 'void seqan::create_nTuple(TStringSet&, FragmentStore<TSpec, TConfig>&, const TStringSet&, const TId&, const unsigned int&) [with TStringSet = StringSet<String<unsigned int, Alloc<> >, Owner<> >; TSpec = void; TConfig = FragmentStoreConfig<void>; TId = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:122:60:   required from 'void seqan::buildTupleCountStore_Fusion(TTupleCountStore&, TTupleCountStore_Fusion&, FragmentStore<TSpec, TConfig>&, TReadAnnoStore&, unsigned int, bool) [with TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TTupleCountStore_Fusion = String<TupleCountStoreElement_Fusion<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>; TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:761:29:   required from 'void seqan::getResults_Fusion(TReadAnnoStore&, TAnnoCountStore&, TTupleCountStore&, TTupleCountStore_Fusion&, FragmentStore<TSpec, TConfig>&, unsigned int, bool, unsigned int, unsigned int, bool) [with TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >; TAnnoCountStore = String<unsigned int, Alloc<> >; TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TTupleCountStore_Fusion = String<TupleCountStoreElement_Fusion<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:870:20:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/base.h:69:23: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
   69 |                 itSet = begin(tempTupleSet);
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/base.h:70:26: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
   70 |                 itSetEnd = end(tempTupleSet);
      |                 ~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/base.h: In instantiation of 'void seqan::create_Tuple(TStringSet&, FragmentStore<TSpec, TConfig>&, const TStringSet&, const TId&, const unsigned int&) [with TStringSet = StringSet<String<unsigned int, Alloc<> >, Owner<> >; TSpec = void; TConfig = FragmentStoreConfig<void>; TId = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:126:41:   required from 'void seqan::buildTupleCountStore_Fusion(TTupleCountStore&, TTupleCountStore_Fusion&, FragmentStore<TSpec, TConfig>&, TReadAnnoStore&, unsigned int, bool) [with TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TTupleCountStore_Fusion = String<TupleCountStoreElement_Fusion<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>; TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:761:29:   required from 'void seqan::getResults_Fusion(TReadAnnoStore&, TAnnoCountStore&, TTupleCountStore&, TTupleCountStore_Fusion&, FragmentStore<TSpec, TConfig>&, unsigned int, bool, unsigned int, unsigned int, bool) [with TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >; TAnnoCountStore = String<unsigned int, Alloc<> >; TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TTupleCountStore_Fusion = String<TupleCountStoreElement_Fusion<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:870:20:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/base.h:97:20: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
   97 |                 it = begin(tempTupleSet);
      |                 ~~~^~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/base.h:98:23: warning: implicitly-declared 'constexpr seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >& seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::operator=(const seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&)' is deprecated [-Wdeprecated-copy]
   98 |                 itEnd = end(tempTupleSet);
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_position.h:105:5: note: because 'seqan::Iter<seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >' has user-provided 'seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >::Iter(const seqan::Iter<TContainer, seqan::CountingIteratorImpl_<seqan::Tag<seqan::Nothing_> > >&) [with TContainer = seqan::StringSet<seqan::String<unsigned int, seqan::Alloc<> >, seqan::Owner<> >]'
  105 |     Iter(Iter const & other_) :
      |     ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:848:15:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:56:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h: In instantiation of 'void seqan::findIntervals(String<TEmission>&, const Graph<TSpec>&, const TPropertyMap&, TValue) [with TSpec = Directed<void, const Tag<WithoutEdgeId_> >; TPropertyMap = String<IntervalTreeNode<IntervalAndCargo<long int, unsigned int>, StorePointsOnly>, Alloc<> >; TValue = unsigned int; TCargo = unsigned int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_intervaltree.h:182:18:   required from 'void seqan::findIntervalsForInterval(String<TCargo>&, TIntervalTree&, TInterval&, unsigned int) [with TIntervalTree = IntervalTree<long int, unsigned int>; TInterval = Interval<unsigned int>; TCargo = unsigned int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:85:27:   required from 'void seqan::getIdsForRead(TAnnoIds&, FragmentStore<TSpec, TConfig>&, TIntervalTree&, TIntervals&, unsigned int) [with TAnnoIds = StringSet<String<unsigned int, Alloc<> >, Owner<> >; TSpec = void; TConfig = FragmentStoreConfig<void>; TIntervalTree = IntervalTree<long int, unsigned int>; TIntervals = String<Interval<unsigned int>, Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/fusion.h:754:18:   required from 'void seqan::getResults_Fusion(TReadAnnoStore&, TAnnoCountStore&, TTupleCountStore&, TTupleCountStore_Fusion&, FragmentStore<TSpec, TConfig>&, unsigned int, bool, unsigned int, unsigned int, bool) [with TReadAnnoStore = String<ReadAnnoStoreElement<unsigned int> >; TAnnoCountStore = String<unsigned int, Alloc<> >; TTupleCountStore = String<TupleCountStoreElement<unsigned int> >; TTupleCountStore_Fusion = String<TupleCountStoreElement_Fusion<unsigned int> >; TSpec = void; TConfig = FragmentStoreConfig<void>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:870:20:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1441:18: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1441 |         act_prop = property(pm, act_knot);
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1453:23: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1453 |             next_prop = property(pm, targetVertex(it));
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:1475:27: warning: implicitly-declared 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>& seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>::operator=(const seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>&)' is deprecated [-Wdeprecated-copy]
 1475 |                 next_prop = property(pm, targetVertex(it));
      |                 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/interval_tree.h:288:5: note: because 'seqan::IntervalTreeNode<seqan::IntervalAndCargo<long int, unsigned int>, seqan::StorePointsOnly>' has user-provided 'seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>::IntervalTreeNode(const seqan::IntervalTreeNode<TInterval, seqan::StorePointsOnly>&) [with TInterval = seqan::IntervalAndCargo<long int, unsigned int>]'
  288 |     IntervalTreeNode(IntervalTreeNode const & other) :
      |     ^~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = True]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:257:14:   required from 'seqan::FormattedFile<TFileFormat, TDirection, TSpec>::FormattedFile(const char*, int) [with TFileFormat = seqan::Tag<seqan::TagGff_>; TDirection = seqan::Tag<seqan::Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:848:15:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:90:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h: In instantiation of 'seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > > seqan::operator+(const Iter<TGaps_, GapsIterator<AnchorGaps<TGapAnchors> > >&, TDifference) [with TGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TDifference = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:679:35:   required from 'typename seqan::Iterator<T, const seqan::Tag<TExpand> >::Type seqan::iter(T&, TPos, const Tag<TExpand>&) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; TTag = Rooted_; typename Iterator<T, const Tag<TExpand> >::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:661:16:   required from 'typename seqan::Iterator<T, typename seqan::DefaultGetIteratorSpec<T>::Type>::Type seqan::iter(T&, TPos) [with T = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TPos = long int; typename Iterator<T, typename DefaultGetIteratorSpec<T>::Type>::Type = Iter<Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >, GapsIterator<AnchorGaps<String<GapAnchor<long int>, Alloc<> > > > >; typename DefaultGetIteratorSpec<T>::Type = const Tag<Rooted_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_anchor.h:466:20:   required from 'void seqan::insertGaps(Gaps<TSequence, AnchorGaps<TGapAnchors> >&, TPosition, TCount) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TGapAnchors = String<GapAnchor<long int>, Alloc<> >; TPosition = long int; TCount = long int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2236:27:   required from 'void seqan::_alignedReadsInsertGaps(TAlignedReadIter, TAlignedReadIter, TPos, TSize, TReadSeqStore&) [with TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TPos = long int; TSize = long int; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2321:40:   required from 'void seqan::_twoWayMergeAlignments(TContigGapsGlobal&, TContigGapsPW&, TReadGaps&, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TAlignedReadIter, TReadSeqStore&) [with TContigGapsGlobal = Gaps<Tag<Nothing_>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TContigGapsPW = Gaps<Tag<Nothing_>, AnchorGaps<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment> > >; TReadGaps = Gaps<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, AnchorGaps<String<GapAnchor<long int>, Alloc<> > > >; TAlignedReadIter = AlignedReadStoreElement<long int, GapAnchor<long int>, void>*; TReadSeqStore = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2437:31:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:839:16:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:773:58: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  773 |     Iter<TGaps, GapsIterator<AnchorGaps<TGapAnchors> > > result = lhs;
      |                                                          ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:775:12: warning: implicitly-declared 'constexpr seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >::Iter(const seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >&)' is deprecated [-Wdeprecated-copy]
  775 |     return result;
      |            ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_iterator_anchor.h:112:18: note: because 'seqan::Iter<seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >, seqan::GapsIterator<seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > > >' has user-provided 'const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >& seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >::operator=(const seqan::Iter<TGaps_, seqan::GapsIterator<seqan::AnchorGaps<TGapAnchors> > >&) [with TGaps_ = seqan::Gaps<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::AnchorGaps<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> > > >; TGapAnchors_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  112 |     Iter const & operator = (Iter const & other_)
      |                  ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>; TSource = Segment<String<GapAnchor<long int>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2393:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:839:16:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::GapAnchor<long int>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:887:15:   required from 'void seqan::assignValue(Holder<TValue, Tag<Tristate_> >&, const TSource&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSource = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:135:20:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2394:29:   required from 'void seqan::convertPairWiseToGlobalAlignment(FragmentStore<TSpec, TConfig>&, TContigGapsString&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigGapsString = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:337:41:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:361:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&, const FragStoreImportFlags&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:373:16:   required from 'void seqan::readRecords(FragmentStore<TSpec, TConfig>&, FormattedFile<Tag<Bam_>, TDirection, TSpec>&) [with TFSSpec = void; TConfig = FragmentStoreConfig<void>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/overlap_module.h:839:16:   required from 'bool seqan::ngsOverlapper(TOptions&) [with TOptions = InsegtOptions]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/insegt.cpp:199:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 95%] Linking CXX executable ../../bin/gustaf
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf && /usr/bin/cmake -E cmake_link_script CMakeFiles/gustaf.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/gustaf.dir/gustaf.cpp.o -o ../../bin/gustaf  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target gustaf
make  -f apps/mason2/CMakeFiles/mason_genome.dir/build.make apps/mason2/CMakeFiles/mason_genome.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_genome.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_genome.dir/build.make apps/mason2/CMakeFiles/mason_genome.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/mason2/CMakeFiles/mason_genome.dir/mason_genome.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_genome.dir/mason_genome.cpp.o -MF CMakeFiles/mason_genome.dir/mason_genome.cpp.o.d -o CMakeFiles/mason_genome.dir/mason_genome.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_genome.cpp
In file included from /usr/include/c++/13/string:51:
In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const char; _Up = char; bool _IsMove = false]',
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = const char*; _OI = char*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7,
    inlined from 'void seqan::_arrayCopyForwardDefault(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:635:14,
    inlined from 'void seqan::arrayCopyForward(TSource1, TSource2, TTarget) [with TTarget = char*; TSource1 = const char*; TSource2 = const char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:644:29,
    inlined from 'void seqan::_arrayConstructCopyPointer(TValueSource*, TValueSource*, TValueTarget*, True) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1003:21,
    inlined from 'void seqan::arrayConstructCopy(TValueSource*, TValueSource*, TValueTarget*) [with TValueSource = const char; TValueTarget = char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:1031:31,
    inlined from 'static void seqan::AssignString_<TExpand>::assign_(TTarget&, TSource&) [with TTarget = seqan::String<char, seqan::Alloc<> >; TSource = const char [1]; TExpand = seqan::Tag<seqan::TagGenerous_>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1011:31,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&, Tag<TUsage>) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]; TExpand = TagGenerous_]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:1056:42,
    inlined from 'void seqan::assign(String<TValue, TSpec>&, const TSource&) [with TTargetValue = char; TTargetSpec = Alloc<>; TSource = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_base.h:992:11,
    inlined from 'void seqan::assignValue(StringSet<TString, Owner<TSpec> >&, TPos, const TSequence&) [with TString = String<char, Alloc<> >; TSpec = Tag<Default_>; TPos = long unsigned int; TSequence = char [1]]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/string_set_owner.h:194:11,
    inlined from 'void seqan::_storeRemoveTempAnnoNames(FragmentStore<TSpec, TConfig>&) [with TConfig = FragmentStoreConfig<void>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:661:28:
/usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' forming offset 1 is out of the bounds [0, 1] [-Warray-bounds=]
  437 |             __builtin_memmove(__result, __first, sizeof(_Tp) * _Num);
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_genome.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_genome.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/simulate_genome.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_genome.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_genome.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Sam_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:231:19,
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TagSelector<TTagList>&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_file.h:233:19,
    inlined from 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_io_sam.h:573:15:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_readOneAlignment(FragmentStore<TSpec, TConfig>&, TContigAnchorGaps&, TMatchMateInfos&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const TFormat&, FragStoreSAMContext<FragmentStore<TSpec, TConfig> >&, const FragStoreImportFlags&) [with TSpec = void; TConfig = FragmentStoreConfig<void>; TContigAnchorGaps = StringSet<String<GapAnchor<long int>, Alloc<> >, Owner<ConcatDirect<> > >; TMatchMateInfos = String<MatchMateInfo_<unsigned int>, Alloc<> >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TFormat = TagSelector<TagList<Tag<Bam_>, TagList<Tag<Sam_> > > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 95%] Linking CXX executable ../../bin/insegt
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/insegt && /usr/bin/cmake -E cmake_link_script CMakeFiles/insegt.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/insegt.dir/insegt.cpp.o -o ../../bin/insegt  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target insegt
make  -f apps/mason2/CMakeFiles/mason_methylation.dir/build.make apps/mason2/CMakeFiles/mason_methylation.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_methylation.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_methylation.dir/build.make apps/mason2/CMakeFiles/mason_methylation.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Building CXX object apps/mason2/CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o -MF CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o.d -o CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_methylation.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_methylation.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_methylation.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 95%] Linking CXX executable ../../bin/mason_genome
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_genome.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/mason_genome.dir/mason_genome.cpp.o -o ../../bin/mason_genome  -lrt -lz -lbz2 libmason_sim.a -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target mason_genome
make  -f apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build.make apps/mason2/CMakeFiles/mason_frag_sequencing.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_frag_sequencing.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build.make apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 96%] Building CXX object apps/mason2/CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o -MF CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o.d -o CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_methylation.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp:39:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_methylation.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_methylation.cpp:143:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_methylation.cpp:143:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_methylation.cpp:143:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp:142:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp:142:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp:142:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp:153:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_frag_sequencing.cpp:142:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 96%] Linking CXX executable ../../bin/mason_methylation
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_methylation.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o -o ../../bin/mason_methylation  -lrt -lz -lbz2 libmason_sim.a -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 96%] Built target mason_methylation
make  -f apps/mason2/CMakeFiles/mason_variator.dir/build.make apps/mason2/CMakeFiles/mason_variator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_variator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_variator.dir/build.make apps/mason2/CMakeFiles/mason_variator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Building CXX object apps/mason2/CMakeFiles/mason_variator.dir/mason_variator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_variator.dir/mason_variator.cpp.o -MF CMakeFiles/mason_variator.dir/mason_variator.cpp.o.d -o CMakeFiles/mason_variator.dir/mason_variator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/random:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp:43:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp:833:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp:884:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Vcf_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Vcf_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp:833:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp:884:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_variator.cpp:884:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 97%] Linking CXX executable ../../bin/mason_frag_sequencing
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_frag_sequencing.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o -o ../../bin/mason_frag_sequencing  -lrt -lz -lbz2 libmason_sim.a -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Built target mason_frag_sequencing
make  -f apps/mason2/CMakeFiles/mason_materializer.dir/build.make apps/mason2/CMakeFiles/mason_materializer.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_materializer.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_materializer.dir/build.make apps/mason2/CMakeFiles/mason_materializer.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Building CXX object apps/mason2/CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o -MF CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o.d -o CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_materializer.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_materializer.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_materializer.cpp:43:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_materializer.cpp:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/genomic_variants.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_materializer.cpp:51:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_materializer.cpp:103:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_materializer.cpp:103:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_materializer.cpp:103:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
[ 97%] Linking CXX executable ../../bin/mason_materializer
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_materializer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o -o ../../bin/mason_materializer  -lrt -lz -lbz2 libmason_sim.a -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Built target mason_materializer
make  -f apps/mason2/CMakeFiles/mason_simulator.dir/build.make apps/mason2/CMakeFiles/mason_simulator.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_simulator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_simulator.dir/build.make apps/mason2/CMakeFiles/mason_simulator.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Building CXX object apps/mason2/CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o -MF CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o.d -o CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp
[ 97%] Linking CXX executable ../../bin/mason_variator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_variator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/mason_variator.dir/mason_variator.cpp.o -o ../../bin/mason_variator  -lrt -lz -lbz2 libmason_sim.a -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Built target mason_variator
make  -f apps/mason2/CMakeFiles/mason_splicing.dir/build.make apps/mason2/CMakeFiles/mason_splicing.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_splicing.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_splicing.dir/build.make apps/mason2/CMakeFiles/mason_splicing.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Building CXX object apps/mason2/CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o -MF CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o.d -o CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_splicing.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/fragment_generation.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/bits/refwrap.h:39,
                 from /usr/include/c++/13/vector:68,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_splicing.cpp:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:44:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_splicing.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/genomic_variants.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/vcf_materialization.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_splicing.cpp:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/fragment_generation.h:51:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:1155:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:1155:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_splicing.cpp:149:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGff_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_splicing.cpp:152:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:1155:18:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_splicing.cpp:149:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagGtf_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGtf_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagGff_>, TagList<Tag<TagGtf_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagGff_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_splicing.cpp:152:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:211:31:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:228:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  586 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, TIntegral) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>; TIntegral = long int]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:634:69:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:211:31:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:228:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:577:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  577 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) + right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator-(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:46:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:211:31:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:228:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:647:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  647 |     return Iter<TContainer, AdaptorIterator<TIterator, TSpec> >(container(left), hostIterator(left) - right);
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:744:24:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:211:31:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:228:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_splicing.cpp:149:22:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:269:34:   required from 'void seqan::_reinitArrayGaps(Gaps<TSequence, Tag<ArrayGaps_> >&) [with TSequence = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gaps_array.h:155:25:   required from 'seqan::Gaps<TSequence, seqan::Tag<seqan::ArrayGaps_> >::Gaps(TSequence&) [with TSequence = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:219:57:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:392:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<const T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:45:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:211:31:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:228:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:351:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  351 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<const T, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(const T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<const T, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:520:23:   required from 'typename seqan::Iterator<const T, const seqan::Tag<TagSpec> >::Type seqan::end(const T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<const T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:650:29:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:211:31:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:228:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:486:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  486 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:117:40:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:586:12:   required from 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> > seqan::operator+(const Iter<TContainer, AdaptorIterator<TIterator, TSpec> >&, int) [with TContainer = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TIterator = SimpleType<unsigned char, Dna5_>*; TSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:631:62:   required from 'void seqan::_computeAlignmentImpl(TDPScout&, TDPScoreMatrixNavigator&, TDPTraceMatrixNavigator&, const TSequenceH&, const TSequenceV&, const TScoringScheme&, const TBand&, const DPProfile_<TAlgorithm, TGapCosts, TTracebackSpec, TExecPolicy>&, const NavigateColumnWiseBanded&) [with TDPScout = DPScout_<DPCell_<int, Tag<LinearGaps_> >, If<HasTerminationCriterium_<GlobalAlignment_<FreeEndGaps_<True, False, True, False> > >, Terminator_<>, Tag<Default_> > >; TDPScoreMatrixNavigator = DPMatrixNavigator_<DPMatrix_<DPCell_<int, Tag<LinearGaps_> >, Tag<SparseDPMatrix_>, String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> > >, Tag<DPScoreMatrix_>, Tag<NavigateColumnWiseBanded_> >; TDPTraceMatrixNavigator = DPMatrixNavigator_<DPMatrix_<unsigned char, Tag<FullDPMatrix_>, String<unsigned char> >, DPTraceMatrix<TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > > >, Tag<NavigateColumnWiseBanded_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoringScheme = Score<int, Tag<Simple_> >; TBand = DPBandConfig<Tag<BandOn_> >; TAlignmentAlgo = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapCosts = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; NavigateColumnWiseBanded = Tag<NavigateColumnWiseBanded_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_algorithm_impl.h:1417:26:   required from 'typename seqan::Value<TScoreScheme>::Type seqan::_computeAlignment(DPContext<TScoreValue, TGapCosts, TScoreMatHost, TTraceMatHost>&, TTraceTarget&, TScoutState&, const TSequenceH&, const TSequenceV&, const TScoreScheme&, const DPBandConfig<TBandSwitch>&, const DPProfile_<TAlignmentAlgorithm, TGapScheme, TTraceFlag, TExecPolicy>&) [with TDPScoreValue = DPCell_<int, Tag<LinearGaps_> >; TTraceValue = unsigned char; TScoreMatHost = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMatHost = String<unsigned char>; TTraceTarget = String<TraceSegment_<long unsigned int, long unsigned int>, Alloc<> >; TScoutState = DPScoutState_<Tag<Default_> >; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreScheme = Score<int, Tag<Simple_> >; TBandSwitch = Tag<BandOn_>; TAlignmentAlgorithm = GlobalAlignment_<FreeEndGaps_<True, False, True, False> >; TGapScheme = Tag<LinearGaps_>; TTraceFlag = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TExecPolicy = Tag<Serial_>; typename Value<TScoreScheme>::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:287:29:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(DPContext<DPCell_<TScoreValue, TGapCostFunction>, TTraceValue, TScoreMat, TTraceMat>&, String<TTraceSegment, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&) [with TScoreValue = int; TGapSpec = Tag<LinearGaps_>; TTraceValue = unsigned char; TScoreMat = String<DPCell_<int, Tag<LinearGaps_> >, Alloc<> >; TTraceMat = String<unsigned char>; TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/dp_setup.h:308:33:   required from 'typename seqan::Value<seqan::Score<TScoreValue2, TScoreSpec> >::Type seqan::_setUpAndRunAlignment(String<TValue, TSpec>&, DPScoutState_<TDPScoutStateSpec>&, const TSequenceH&, const TSequenceV&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig2<TDPType, TBand, TFreeEndGaps, TTraceConfig>&, const TGapModel&) [with TTraceSegment = TraceSegment_<long unsigned int, long unsigned int>; TSpec = Alloc<>; TDPScoutStateSpec = Tag<Default_>; TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TScoreValue2 = int; TScoreSpec = Tag<Simple_>; TDPType = GlobalAlignment_<>; TBand = DPBandConfig<Tag<BandOn_> >; TFreeEndGaps = FreeEndGaps_<True, False, True, False>; TTraceConfig = TracebackOn<TracebackConfig_<Tag<SingleTrace_>, Tag<GapsLeft_> > >; TGapModel = Tag<LinearGaps_>; typename Value<Score<TScoreValue2, TScoreSpec> >::Type = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:176:44:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int, const TAlgoTag&) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>; TAlgoTag = Tag<NeedlemanWunsch_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/global_alignment_banded.h:211:31:   required from 'TScoreValue seqan::globalAlignment(Gaps<TSequence, TSpec>&, Gaps<TSequenceV, TGapsSpecV>&, const Score<TScoreValue2, TScoreSpec>&, const AlignConfig<TOP, LEFT, RIGHT, BOTTOM, TACSpec>&, int, int) [with TSequenceH = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TGapsSpecH = Tag<ArrayGaps_>; TSequenceV = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TGapsSpecV = Tag<ArrayGaps_>; TScoreValue = int; TScoreSpec = Tag<Simple_>; bool TOP = true; bool LEFT = false; bool RIGHT = false; bool BOTTOM = true; TACSpec = Tag<Default_>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_simulator.cpp:228:39:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:379:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:386:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 97%] Linking CXX executable ../../bin/mason_splicing
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_splicing.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o -o ../../bin/mason_splicing  -lrt -lz -lbz2 libmason_sim.a -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Built target mason_splicing
make  -f apps/mason2/CMakeFiles/mason_tests.dir/build.make apps/mason2/CMakeFiles/mason_tests.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_tests.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_tests.dir/build.make apps/mason2/CMakeFiles/mason_tests.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Building CXX object apps/mason2/CMakeFiles/mason_tests.dir/mason_tests.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.9\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/mason2/CMakeFiles/mason_tests.dir/mason_tests.cpp.o -MF CMakeFiles/mason_tests.dir/mason_tests.cpp.o.d -o CMakeFiles/mason_tests.dir/mason_tests.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_tests.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:47,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_tests.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/mason_tests.cpp:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/methylation_levels.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2/sequencing.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:49:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 97%] Linking CXX executable ../../bin/mason_simulator
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_simulator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o -o ../../bin/mason_simulator  -lrt -lz -lbz2 libmason_sim.a -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Built target mason_simulator
make  -f apps/micro_razers/CMakeFiles/micro_razers.dir/build.make apps/micro_razers/CMakeFiles/micro_razers.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers/CMakeFiles/micro_razers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/micro_razers/CMakeFiles/micro_razers.dir/build.make apps/micro_razers/CMakeFiles/micro_razers.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Building CXX object apps/micro_razers/CMakeFiles/micro_razers.dir/micro_razers.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.11\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/micro_razers/CMakeFiles/micro_razers.dir/micro_razers.cpp.o -MF CMakeFiles/micro_razers.dir/micro_razers.cpp.o.d -o CMakeFiles/micro_razers.dir/micro_razers.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:28,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:25:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:29:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/bam_sam.h:39,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 97%] Linking CXX executable ../../bin/mason_tests
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_tests.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/mason_tests.dir/mason_tests.cpp.o -o ../../bin/mason_tests  -lrt -lz -lbz2 libmason_sim.a -lrt -lz -lbz2
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
[ 97%] Built target mason_tests
make  -f apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build.make apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/DependInfo.cmake "--color="
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
make  -f apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build.make apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[ 97%] Building CXX object apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o -MF CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o.d -o CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_plot_thumbnails.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:643:44: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  643 |         struct LessRNoGPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:672:49: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  672 |         struct LessRNoEdistHLen : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:728:47: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  728 |         struct LessRNoGEndPos : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:760:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  760 |         struct LessErrors : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:38:
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/outputFormat.h:126:44: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  126 |         struct LessGPosRNo : public ::std::binary_function < TReadMatch, TReadMatch, bool >
      |                                            ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_plot_thumbnails.cpp:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_plot_thumbnails.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io/roi_io_context.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io.h:54,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_plot_thumbnails.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFastq_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:414:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = TagFasta_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:414:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Roi_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_plot_thumbnails.cpp:432:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Embl_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:414:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h: In instantiation of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, const TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobalHamming) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobalHamming = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1359:35: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1359 |                 return matchVerify(m,inf,rseqNo,readSet,options,MicroRNA());
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:96:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1257:40: note:   initializing argument 2 of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, const RazerSOptions<TSpec>&, MicroRNA) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TSpec = RazerSSpec<>]'
 1257 |         Segment<TGenome, InfixSegment> inf,             // potential match genome region
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h: In instantiation of 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1471:33: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
 1471 |         TGenomeInfixRev         infRev(inf);
      |                                 ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Roi_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_plot_thumbnails.cpp:432:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = GenBank_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:414:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Raw_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   recursively required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<TagFastq_>, TagList<Tag<TagFasta_>, TagList<Tag<Embl_>, TagList<Tag<GenBank_>, TagList<Tag<Raw_>, TagList<Tag<Sam_>, TagList<Tag<Bam_> > > > > > > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<TagFastq_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:414:23:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:222:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1697:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2268:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:87:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<Hamming_> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Hamming_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1697:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2271:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/cyclic_shape.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:68:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1471:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >; TSpec = InfixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:118:25:   required from 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1472:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1697:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2279:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h: In instantiation of 'void seqan::_patternInit(Pattern<TIndex, Swift<TSpec> >&, TFloat, TSize_) [with TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TFloat = double; TSize_ = int; TSpec = Tag<SwiftSemiGlobal_<void> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1929:21:   required from 'bool seqan::find(Finder<THaystack, Swift<TSwiftSpec> >&, Pattern<TIndex, Swift<TSwiftSpec> >&, double, TSize) [with THaystack = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Tag<SwiftSemiGlobal_<void> >; TSize = int]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:1913:16:   required from 'bool seqan::find(TFinder&, Pattern<TIndex, Swift<Tag<SwiftSemiGlobal_<TSpec> > > >&, double) [with TFinder = Finder<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, Swift<Tag<SwiftSemiGlobal_<void> > > >; TIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1697:13:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2282:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/find_swift.h:752:23: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  752 |         pattern.shape = indexShape(host(pattern));
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:94:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_beginDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:385:25:   required from 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<typename seqan::RemoveReference<T>::Type> >, typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type>::Type seqan::begin(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename DisableIf<Is<StlContainerConcept<typename RemoveReference<T>::Type> >, typename Iterator<T, const Tag<TagSpec> >::Type>::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; typename RemoveReference<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1440:15:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:343:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  343 |     return TIterator(me, begin(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_iterator.h:80,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:86,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h: In instantiation of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(const seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >&) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:72:7:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1473:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:124:15: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  124 |             : data_container(other_.data_container),
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:72,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1666:31:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::UngappedShape<0> >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1666:31:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, OneGappedShape>; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2268:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'constexpr seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_onegapped.h:107:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>' has user-provided 'seqan::Shape<TValue, seqan::OneGappedShape>::Shape(const seqan::Shape<TValue, seqan::OneGappedShape>&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  107 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::OneGappedShape>, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h: In instantiation of 'typename seqan::DisableIf<seqan::Is<seqan::StlContainerConcept<TTarget> > >::Type seqan::assign(TTarget&, TSource&) [with TTarget = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSource = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename DisableIf<Is<StlContainerConcept<TTarget> > >::Type = void]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:645:15:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TValue2 = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   required from 'typename seqan::Reference<seqan::Holder<TValue, seqan::Tag<seqan::Tristate_> > >::Type seqan::value(Holder<TValue, Tag<Tristate_> >&) [with TValue = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; typename Reference<Holder<TValue, Tag<Tristate_> > >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:339:17:   required from 'typename seqan::Host<seqan::Pattern<TNeedle, TSpec> >::Type& seqan::host(Pattern<TNeedle, TSpec>&) [with TNeedle = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSpec = Swift<Tag<SwiftSemiGlobal_<Hamming_> > >; typename Host<Pattern<TNeedle, TSpec> >::Type = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1666:31:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, GappedShape<Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2271:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: warning: implicitly-declared 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:278:5: note: because 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >::Index(const seqan::Index<TText, seqan::IndexQGram<TShapeSpec, TSpec> >&) [with TText_ = seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >; TShapeSpec = seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >; TSpec = seqan::Tag<seqan::Default_>]'
  278 |     Index(Index const &other):
      |     ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:229:7: warning: implicitly-declared 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >& seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::operator=(const seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&)' is deprecated [-Wdeprecated-copy]
  229 | class Index<TText_, IndexQGram<TShapeSpec, TSpec> > {
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/shape_gapped.h:281:9: note: because 'seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >' has user-provided 'seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >::Shape(const seqan::Shape<TValue, seqan::GappedShape<seqan::Tag<seqan::Default_> > >&) [with TValue = seqan::SimpleType<unsigned char, seqan::Dna_>]'
  281 |         Shape(Shape const &other):
      |         ^~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_transport.h:110:12: note: synthesized method 'seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >& seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >::operator=(const seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::Owner<seqan::ConcatDirect<> > >, seqan::IndexQGram<seqan::Shape<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::GappedShape<seqan::Tag<seqan::Default_> > >, seqan::Tag<seqan::Default_> > >&)' first required here
  110 |     target = source;
      |     ~~~~~~~^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find.h:55:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h: In instantiation of 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = void; typename Parameter_<T>::Type = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, void>; TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = FindInfix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1455:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:38: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  599 |     return container(hostIterator(me));
      |                                      ^
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h: In instantiation of 'typename seqan::Iterator<TObject, const seqan::Tag<seqan::Rooted_> >::Type seqan::_endDefault(T&, Rooted) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; typename Iterator<TObject, const Tag<Rooted_> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; Rooted = const Tag<Rooted_>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:512:23:   required from 'typename seqan::Iterator<T, const seqan::Tag<TagSpec> >::Type seqan::end(T&, Tag<TagSpec>) [with T = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TSpec = Rooted_; typename Iterator<T, const Tag<TagSpec> >::Type = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_reverse.h:469:24:   required from 'typename seqan::Iterator<seqan::ModifiedString<THost, seqan::Tag<seqan::ModReverse_> >, const seqan::Tag<TagSpec> >::Type seqan::begin(ModifiedString<THost, Tag<ModReverse_> >&, Tag<TagSpec>) [with THost = Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>; TTagSpec = Rooted_; typename Iterator<ModifiedString<THost, Tag<ModReverse_> >, const Tag<TagSpec> >::Type = ModifiedIterator<Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:301:30:   required from 'seqan::Finder<THaystack, TSpec>::Finder(THaystack&) [with THaystack = seqan::ModifiedString<seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag<seqan::ModReverse_> >; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1473:19:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/sequence_interface.h:478:12: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  478 |     return TIterator(me, end(me, Standard()));
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/iterator_adaptor.h:116:48: note:   initializing argument 1 of 'seqan::Iter<TContainer, seqan::AdaptorIterator<TIterator, TSpec> >::Iter(typename seqan::Parameter_<TContainer>::Type, TIterator) [with TContainer = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TIterator = seqan::SimpleType<unsigned char, seqan::Dna5_>*; TSpec = seqan::Tag<seqan::Default_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  116 |     Iter(typename Parameter_<TContainer>::Type container_, TIterator it_)
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:61:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h: In instantiation of 'typename seqan::Container<seqan::ModifiedIterator<THost, TSpec> >::Type seqan::container(ModifiedIterator<THost, TSpec>&) [with THost = Iter<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, AdaptorIterator<SimpleType<unsigned char, Dna5_>*, Tag<Default_> > >; TSpec = Tag<ModReverse_>; typename Container<ModifiedIterator<THost, TSpec> >::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_base.h:599:21:   required from 'typename seqan::Parameter_<T>::Type seqan::container(Finder<THaystack, TSpec>&) [with THaystack = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = void; typename Parameter_<T>::Type = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1603:45:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1636:16:   required from 'bool seqan::find(TFinder&, const Pattern<TNeedle, Myers<TSpec, THasState, TFindBeginPatternSpec> >&, PatternState_<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; THasState = True; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_myers_ukkonen.h:1654:16:   required from 'bool seqan::find(TFinder&, Pattern<TNeedle, Myers<TSpec, True, TFindBeginPatternSpec> >&, int) [with TFinder = Finder<ModifiedString<Segment<String<SimpleType<unsigned char, Dna5_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >, void>; TNeedle = ModifiedString<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<ModReverse_> >; TSpec = FindPrefix; TFindBeginPatternSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1478:13:   required from 'bool seqan::matchVerify(TMatch&, Segment<TSpec>, unsigned int, TReadSet&, TMyersPatterns&, const RazerSOptions<TSpec>&, SwiftSemiGlobal) [with TMatch = ReadMatch<long int>; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TMyersPatterns = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TSpec = RazerSSpec<>; SwiftSemiGlobal = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1717:15:   required from 'void seqan::mapSingleReads(TMatches&, TGenome&, unsigned int, Pattern<TIndex, Swift<TSpec> >&, TVerifier&, TCounts&, char, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TGenome = String<SimpleType<unsigned char, Dna5_>, Alloc<> >; TReadIndex = Index<StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >, IndexQGram<Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >, Tag<Default_> > >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >; TVerifier = String<Pattern<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Myers<FindInfix, True, void> >, Alloc<> >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2043:19:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<void> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2276:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_iterator.h:278:16: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  278 |     TContainer cont(container(host(me)));
      |                ^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_string.h:117:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, TSpec>::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>; TSpec = seqan::Tag<seqan::ModReverse_>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<> >, seqan::InfixSegment>]'
  117 |     ModifiedString(typename Parameter_<THost>::Type host) :
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_fundamental.h:82:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h: In instantiation of 'static void seqan::ValueConstructor_::construct(TIterator, TParam&&) [with TIterator = seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>*; TParam = const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:305:28:   required from 'void seqan::valueConstruct(TIterator, TParam&&) [with TIterator = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>*; TParam = const Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>&]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:548:19:   required from 'typename seqan::Value<TContext>::Type* seqan::_holderAllocateObject(THolder&, const TValue&) [with THolder = Holder<Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>, Tag<Tristate_> >; TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; typename Value<TContext>::Type = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:650:42:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&, TValue2&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TValue2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:594:19:   required from 'void seqan::create(Holder<TValue, Tag<Tristate_> >&) [with TValue = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/holder_tristate.h:863:15:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/find/find_pattern_base.h:254:13:   required from 'void seqan::setHost(Pattern<TNeedle, TSpec>&, TNeedle2&&) [with TNeedle = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>; TSpec = Myers<FindInfix, True, void>; TNeedle2 = Segment<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, InfixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:1971:11:   required from 'int seqan::mapSingleReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, const TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2206:24:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&, const TShape&, Swift<TSwiftSpec>) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>; TShape = Shape<SimpleType<unsigned char, Dna_>, UngappedShape<0> >; TSwiftSpec = Tag<SwiftSemiGlobal_<Hamming_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/razers.h:2265:19:   required from 'int seqan::mapReads(TMatches&, StringSet<String<char, Alloc<> > >&, StringSet<String<char, Alloc<> > >&, std::map<unsigned int, std::pair<std::__cxx11::basic_string<char>, unsigned int> >&, TReadSet&, TCounts&, RazerSOptions<TSpec>&) [with TMatches = String<ReadMatch<long int> >; TReadSet = StringSet<String<SimpleType<unsigned char, Dna5Q_>, Alloc<> >, Owner<ConcatDirect<> > >; TCounts = String<String<short unsigned int> >; TSpec = RazerSSpec<>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:165:25:   required from 'int mapMicroRNAReads(seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::StringSet<seqan::String<char, seqan::Alloc<> > >&, seqan::CharString, seqan::RazerSOptions<TSpec>&) [with TSpec = seqan::RazerSSpec<>; seqan::CharString = seqan::String<char, seqan::Alloc<> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/micro_razers.cpp:551:34:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/array_construct_destruct.h:254:9: warning: implicitly-declared 'constexpr seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>::Segment(const seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>&)' is deprecated [-Wdeprecated-copy]
  254 |         new( (void*) & value(it) ) TNonConstValue(std::forward<TParam>(param_));
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_infix.h:143:5: note: because 'seqan::Segment<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >, seqan::InfixSegment>' has user-provided 'seqan::Segment<THost_, seqan::InfixSegment>& seqan::Segment<THost_, seqan::InfixSegment>::operator=(const seqan::Segment<THost_, seqan::InfixSegment>&) [with THost_ = seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Alloc<> >]'
  143 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 97%] Linking CXX executable ../../bin/roi_plot_thumbnails
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi && /usr/bin/cmake -E cmake_link_script CMakeFiles/roi_plot_thumbnails.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o -o ../../bin/roi_plot_thumbnails  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Built target roi_plot_thumbnails
make  -f apps/ngs_roi/CMakeFiles/bam2roi.dir/build.make apps/ngs_roi/CMakeFiles/bam2roi.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/bam2roi.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/ngs_roi/CMakeFiles/bam2roi.dir/build.make apps/ngs_roi/CMakeFiles/bam2roi.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Building CXX object apps/ngs_roi/CMakeFiles/bam2roi.dir/bam2roi.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/ngs_roi/CMakeFiles/bam2roi.dir/bam2roi.cpp.o -MF CMakeFiles/bam2roi.dir/bam2roi.cpp.o.d -o CMakeFiles/bam2roi.dir/bam2roi.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/bam2roi.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/bam2roi.cpp:40:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/bam2roi.cpp:37:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io.h:50,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/bam2roi.cpp:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io/roi_io_context.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io.h:54,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_builder.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/bam2roi.cpp:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_builder.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Roi_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/bam2roi.cpp:318:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Roi_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Output_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Output_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/bam2roi.cpp:318:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::parseGappedParams(RazerSOptions<TSpec>&, TFile&, ParamChooserOptions&) [with TFile = std::basic_fstream<char>; TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/paramChooser.h:992:51,
    inlined from 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/../razers/paramChooser.h:1285:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'bool seqan::chooseParams(RazerSOptions<TSpec>&, ParamChooserOptions&) [with TSpec = RazerSSpec<>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short unsigned int; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short unsigned int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short unsigned int; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = char*]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = char*]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, char*>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:151:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = char*]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:21,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = short int; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = short int; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const short int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = short int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = unsigned char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:627:13,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = signed char; TSource = String<char, Alloc<> >]',
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:82:47,
    inlined from 'bool seqan::AppendTagsSamToBamOneTagHelper_<TTarget, TBuffer>::operator()(Type) [with Type = signed char; TTarget = seqan::String<char, seqan::Alloc<> >; TBuffer = seqan::String<char, seqan::Alloc<> >&]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:77:10,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<T2, void>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = signed char]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:620:16,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned char; TSubList = TagList<signed char>]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = char; TSubList = TagList<unsigned char, TagList<signed char> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short unsigned int; TSubList = TagList<char, TagList<unsigned char, TagList<signed char> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = short int; TSubList = TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = float; TSubList = TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = unsigned int; TSubList = TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'bool seqan::tagApply(TFunctor&, TagList<TTag2, TSubList2>) [with TFunctor = AppendTagsSamToBamOneTagHelper_<String<char, Alloc<> >, String<char, Alloc<> >&>; TTag = int; TSubList = TagList<unsigned int, TagList<float, TagList<short int, TagList<short unsigned int, TagList<char, TagList<unsigned char, TagList<signed char> > > > > > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/fundamental_tags.h:629:20,
    inlined from 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_sam_conversion.h:166:26:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::_appendTagsSamToBamOneTag(TTarget&, TForwardIter&, CharString&) [with TTarget = String<char, Alloc<> >; TForwardIter = Iter<const String<char, Alloc<> >, AdaptorIterator<const char*, Tag<Default_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const signed char&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = signed char; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 97%] Building CXX object apps/micro_razers/CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.11\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/micro_razers/CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o -MF CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o.d -o CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/param_tabs.cpp
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:320:50:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/read_sam.h:363:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(BamAlignmentRecord&, BamIOContext<TNameStore, TNameStoreCache, TStorageSpec>&, TForwardIter&, const Sam&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >; TNameStore = StringSet<String<char, Alloc<> > >; TNameStoreCache = NameStoreCache<StringSet<String<char, Alloc<> > > >; TStorageSpec = Dependent<Tag<TagInsist_> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
[ 97%] Linking CXX executable ../../bin/micro_razers
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers && /usr/bin/cmake -E cmake_link_script CMakeFiles/micro_razers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/micro_razers.dir/micro_razers.cpp.o CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o -o ../../bin/micro_razers  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 97%] Built target micro_razers
make  -f apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build.make apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build.make apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 98%] Building CXX object apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o -MF CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o.d -o CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp
[ 98%] Building CXX object apps/ngs_roi/CMakeFiles/bam2roi.dir/roi_builder.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/ngs_roi/CMakeFiles/bam2roi.dir/roi_builder.cpp.o -MF CMakeFiles/bam2roi.dir/roi_builder.cpp.o.d -o CMakeFiles/bam2roi.dir/roi_builder.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_builder.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/arg_parse.h:46,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:46:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/sstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:41:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_builder.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_builder.cpp:35:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_builder.h:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io/roi_io_context.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io.h:54:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io/roi_io_context.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io.h:54,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_interval.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa.h:44,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_builder.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_msa/graph_align_tcoffee_base.h:304:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  304 |     public std::binary_function<TVertexDescriptor, TCargo, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:88:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   88 |     public std::unary_function<Pair<TSize, TSize>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/consensus_library.h:99:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   99 |     public std::unary_function<Pair<TSize, Triple<TSize, TSize, TSize> >, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus/overlap_info_computation.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/consensus.h:65:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:45:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   45 |     struct filterI1 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:54:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   54 |     struct filterI2 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pipe_filter.h:63:35: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 |     struct filterI3 : public std::unary_function<TValue, TResult>
      |                                   ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:74:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:351:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  351 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_mapper.h:457:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  457 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe.h:78:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:42:46: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   42 |     struct MergeStreamComparer : public std::binary_function < PageBucket<TValue>,
      |                                              ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:57:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |         public std::binary_function <
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:206:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  206 |         struct insertBucket : public std::unary_function<TPageBucket,void>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/pipe/pool_sorter.h:321:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  321 |         struct insertBucket : public std::unary_function<TPageBucket, void> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/misc/set.h:373:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  373 |     struct SetLess_ : public std::binary_function<TElement, TElement, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:76:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:340:35: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  340 |     struct FibreLess: public std::binary_function<FibreRecord, unsigned, bool>
      |                                   ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:646:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  646 |     struct FunctorGlobalize : public std::unary_function<InType,Result>
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_base.h:660:68: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  660 |     struct FunctorGlobalize<InType, Nothing, Result> : public std::unary_function<InType,InType>
      |                                                                    ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:91:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:666:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  666 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:714:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  714 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:782:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  782 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:851:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  851 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:885:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  885 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:933:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  933 | public std::binary_function < TSAValue, TSAValue, bool >
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1814:33: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1814 | struct _qgramComp : public std::binary_function<InType,InType,Result> {
      |                                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_qgram.h:1833:13: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 1833 | public std::binary_function<
      |             ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:102:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:46:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   46 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_sa_qsort.h:85:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   85 |         public std::binary_function < TSAValue, TSAValue, bool >
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:107:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:98:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   98 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Roi_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:876:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:112:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  112 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:127:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  127 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:144:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew3.h:154:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:110:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:110:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  110 |         public std::binary_function < SkewDCStream<TValue>,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/pipe_merger7.h:143:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  143 |         public std::binary_function < SkewDCStream<Triple<T1, T2, Tuple<T, SIZE, BitPacked<> >, Pack> >,
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:111:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:65:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   65 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:99:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   99 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:118:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  118 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:132:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  132 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:154:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  154 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:175:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  175 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7.h:185:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  185 |         public std::binary_function<TValue, TValue, TResult>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:114:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:57:43: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   57 |     struct _skew7NCompMulti : public std::binary_function<TValue, TValue, TResult> {
      |                                           ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:97:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
   97 |         public std::binary_function<
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_skew7_multi.h:141:21: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  141 |         public std::unary_function<TValue, TResult>
      |                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:121:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:59:38: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   59 |     struct _mapInverse : public std::unary_function<InType,Result> {
      |                                      ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_lcp.h:164:43: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  164 |     struct _mapInverseMulti : public std::unary_function<InType,Result> {
      |                                           ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:125:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_bwt.h:144:44: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  144 |     struct _filterGlobalizer : public std::unary_function<InType,Result> {
      |                                            ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:131:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/index_shims.h:556:21: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  556 |         public std::binary_function< Pair<T1,T2,TPack>, Pair<T1,T2,TPack>, bool>
      |                     ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Roi_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Roi_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:876:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index.h:188:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/index/repeat_base.h:120:38: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  120 |     struct RepeatLess_ : public std::binary_function<TPos, TPos, bool>
      |                                      ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[ 98%] Linking CXX executable ../../bin/bam2roi
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi && /usr/bin/cmake -E cmake_link_script CMakeFiles/bam2roi.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/bam2roi.dir/bam2roi.cpp.o CMakeFiles/bam2roi.dir/roi_builder.cpp.o -o ../../bin/bam2roi  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 98%] Built target bam2roi
make  -f apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 98%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o -MF CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o.d -o CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.cpp:37:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:119:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:113:43,
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed4_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:135:25,
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed5_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:154:25,
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed6_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:173:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed6_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed6_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'void IntersectWithBedConfig::readRecord(seqan::BedRecord<seqan::Tag<seqan::Bed6_> >&)' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:168:30:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void IntersectWithBedConfig::readRecord(seqan::BedRecord<seqan::Tag<seqan::Bed6_> >&)':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:379:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = unsigned int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io/gff_io_base.h:386:42:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In function 'void seqan::readRecord(GffRecord&, CharString&, TFwdIterator&) [with TFwdIterator = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const unsigned int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = unsigned int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:113:43,
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed4_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:135:25,
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed5_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:154:25,
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed6_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:173:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed6_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed6_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'void IntersectWithBedConfig::readRecord(seqan::BedRecord<seqan::Tag<seqan::Bed6_> >&)' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:168:30,
    inlined from 'void IntersectDriver<TConfig>::run() [with TConfig = IntersectWithBedConfig]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:356:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void IntersectDriver<TConfig>::run() [with TConfig = IntersectWithBedConfig]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In function 'TTarget seqan::lexicalCast(const TSource&) [with TTarget = int; TSource = String<char, Alloc<> >]',
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed3_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:119:41,
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed4_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:135:25,
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed5_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:154:25,
    inlined from 'void seqan::_readBedRecordNoData(BedRecord<Tag<Bed6_> >&, TForwardIter&, CharString&) [with TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:173:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, CharString&, TForwardIter&, const Bed&) [with TSpec = Tag<Bed6_>; TForwardIter = Iter<VirtualStream<char, Tag<Input_> >, StreamIterator<Tag<Input_> > >]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/read_bed.h:273:25,
    inlined from 'void seqan::readRecord(BedRecord<TSpec>&, FormattedFile<Tag<Bed_>, Tag<Input_>, TSpec>&) [with TRecordSpec = Tag<Bed6_>; TSpec = void]' at /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io/bed_file.h:111:15,
    inlined from 'void IntersectWithBedConfig::readRecord(seqan::BedRecord<seqan::Tag<seqan::Bed6_> >&)' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:168:30,
    inlined from 'void IntersectDriver<TConfig>::run() [with TConfig = IntersectWithBedConfig]' at /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/roi_feature_projection.cpp:356:34:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:255:9: warning: 'target' may be used uninitialized [-Wmaybe-uninitialized]
  255 |         throw BadLexicalCast(target, source);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h: In member function 'void IntersectDriver<TConfig>::run() [with TConfig = IntersectWithBedConfig]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:72:5: note: by argument 2 of type 'const int&' to 'seqan::BadLexicalCast::BadLexicalCast(const TTarget&, const TSource&) [with TTarget = int; TSource = seqan::String<char, seqan::Alloc<> >]' declared here
   72 |     BadLexicalCast(TTarget const & target, TSource const & source) :
      |     ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/lexical_cast.h:253:13: note: 'target' declared here
  253 |     TTarget target;
      |             ^~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[100%] Linking CXX static library libpair_align_lib.a
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/cmake -P CMakeFiles/pair_align_lib.dir/cmake_clean_target.cmake
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib && /usr/bin/cmake -E cmake_link_script CMakeFiles/pair_align_lib.dir/link.txt --verbose=1
/usr/bin/ar qc libpair_align_lib.a CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o CMakeFiles/pair_align_local.dir/pair_align_local.cpp.o CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o
[100%] Building CXX object apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o -MF CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o.d -o CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_spliced.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_spliced.h:51,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_spliced.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_spliced.h:48:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io/roi_io_context.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io.h:54,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_spliced.h:52:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/gff_io.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[100%] Building CXX object apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o -MF CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o.d -o CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_interval.cpp
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bed_io.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_interval.h:42,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_interval.cpp:36:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/istream:40,
                 from /usr/include/c++/13/fstream:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_interval.h:38:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:38,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io/roi_io_context.h:40,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/roi_io.h:54,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/project_interval.h:43:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:41:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/usr/bin/ranlib libpair_align_lib.a
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:58:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[100%] Built target pair_align_lib
make  -f apps/pair_align/CMakeFiles/pair_align.dir/build.make apps/pair_align/CMakeFiles/pair_align.dir/depend
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/CMakeFiles/pair_align.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/CMakeFiles/pair_align.dir/build.make apps/pair_align/CMakeFiles/pair_align.dir/build
make[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[100%] Building CXX object apps/pair_align/CMakeFiles/pair_align.dir/pair_align.cpp.o
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.8\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.4.0+dfsg/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp    -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -MD -MT apps/pair_align/CMakeFiles/pair_align.dir/pair_align.cpp.o -MF CMakeFiles/pair_align.dir/pair_align.cpp.o.d -o CMakeFiles/pair_align.dir/pair_align.cpp.o -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/pair_align.cpp
[100%] Linking CXX executable ../../bin/roi_feature_projection
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi && /usr/bin/cmake -E cmake_link_script CMakeFiles/roi_feature_projection.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o -o ../../bin/roi_feature_projection  -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[100%] Built target roi_feature_projection
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:74,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:57,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/pair_align.cpp:16:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:79:36: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   79 | struct FunctorUpcase : public std::unary_function<InType, Result>
      |                                    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/13/string:49,
                 from /usr/include/c++/13/bits/locale_classes.h:40,
                 from /usr/include/c++/13/bits/ios_base.h:41,
                 from /usr/include/c++/13/ios:44,
                 from /usr/include/c++/13/ostream:40,
                 from /usr/include/c++/13/iostream:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/debug_test_system.h:150,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic/basic_debug.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/basic.h:49,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:40:
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:113:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  113 | struct FunctorLowcase : public std::unary_function<InType, Result>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:147:37: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  147 | struct FunctorConvert : public std::unary_function<InType,OutType>
      |                                     ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:219:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  219 | struct FunctorComplement<char> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:228:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  228 | struct FunctorComplement<Dna> : public std::unary_function<Dna,Dna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:237:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  237 | struct FunctorComplement<Dna5> : public std::unary_function<Dna5,Dna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:246:45: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  246 | struct FunctorComplement<Rna> : public std::unary_function<Rna,Rna>
      |                                             ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:255:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  255 | struct FunctorComplement<Rna5> : public std::unary_function<Rna5,Rna5>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:264:46: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  264 | struct FunctorComplement<DnaQ> : public std::unary_function<DnaQ,DnaQ>
      |                                              ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:276:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  276 | struct FunctorComplement<Dna5Q> : public std::unary_function<Dna5Q,Dna5Q>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_functors.h:287:47: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  287 | struct FunctorComplement<Iupac> : public std::unary_function<Iupac,Iupac>
      |                                               ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:79:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_position.h:393:31: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  393 | struct PosLess_ : public std::binary_function<TPos, TPos, bool>
      |                               ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file.h:92,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:62,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/score.h:43,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:45,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:59:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/file/string_external.h:1338:41: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
 1338 |         struct testIODone : public std::unary_function<TPageFrame&,bool>
      |                                         ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:48,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_align.h:48:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h:325:17: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  325 |     public std::unary_function<Pair<TKey, TValue>, bool>
      |                 ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/graph_algorithms/kruskal.h:63:34: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
   63 | struct LessPairI1_ : public std::unary_function<Pair<TWeight, TPair>, bool>
      |                                  ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align.h:88:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:224:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  224 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/align/gap_anchor.h:234:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  234 |     public std::binary_function<TGapAnchor, TGapAnchor, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:52,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib/pair_align_lib.h:44:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fasta_fastq.h:221:39: warning: 'template<class _Arg, class _Result> struct std::unary_function' is deprecated [-Wdeprecated-declarations]
  221 | struct QualityExtractor : public std::unary_function<TValue, char>
      |                                       ^~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:117:12: note: declared here
  117 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:60,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io/fai_index.h:41,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/seq_io.h:73:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:352:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  352 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:362:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  362 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:372:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  372 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:382:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  382 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:392:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  392 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_align.h:402:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
  402 |     public std::binary_function<TAlignedRead, TAlignedRead, bool>
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store.h:62:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/store/store_all.h:2155:17: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations]
 2155 |     public std::binary_function<
      |                 ^~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_function.h:131:12: note: declared here
  131 |     struct binary_function
      |            ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:98,
                 from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:47:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier.h:75:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h: In instantiation of 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Sam_]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Sam_> >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:120:35:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  159 |     TLowcase lowcaseFileName(fileName);
      |              ^~~~~~~~~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:150:53: note:   initializing argument 1 of 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
  150 |     ModifiedString(typename Parameter_<THost>::Type host):
      |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence.h:95:
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h: In instantiation of 'typename seqan::Pointer_<seqan::Segment<THost, TSpec> >::Type seqan::_toPointer(Segment<THost, TSpec>&) [with THost = const char*; TSpec = PrefixSegment; typename Pointer_<Segment<THost, TSpec> >::Type = Segment<const char*, PrefixSegment>]':
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/modifier/modifier_view.h:151:25:   required from 'seqan::ModifiedString<THost, seqan::ModView<TFunctor> >::ModifiedString(typename seqan::Parameter_<TContainer>::Type) [with THost = const seqan::Segment<const char*, seqan::PrefixSegment>; TFunctor = seqan::FunctorLowcase<const char, const char>; typename seqan::Parameter_<TContainer>::Type = seqan::Segment<const char*, seqan::PrefixSegment>]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:159:14:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, Tag<TagSpec>) [with TFilename = Segment<const char*, PrefixSegment>; TFormat_ = Bam_]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/guess_format.h:114:36:   required from 'bool seqan::guessFormatFromFilename(const TFilename&, TagSelector<TSubList>&) [with TFilename = Segment<const char*, PrefixSegment>; TTagList = TagList<Tag<Bam_>, TagList<Tag<Sam_> > >]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:722:37:   required from 'bool seqan::_open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int, TThrowExceptions) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void; TThrowExceptions = False]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/stream/formatted_file.h:739:17:   required from 'bool seqan::open(FormattedFile<TFileFormat, TDirection, TSpec>&, const char*, int) [with TFileFormat = Tag<Bam_>; TDirection = Tag<Input_>; TSpec = void]'
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/bam_io/bam_index_bai.h:699:14:   required from here
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_base.h:443:12: warning: implicitly-declared 'constexpr seqan::Segment<const char*, seqan::PrefixSegment>::Segment(const seqan::Segment<const char*, seqan::PrefixSegment>&)' is deprecated [-Wdeprecated-copy]
  443 |     return me;
      |            ^~
/build/reproducible-path/seqan2-2.4.0+dfsg/include/seqan/sequence/segment_prefix.h:117:5: note: because 'seqan::Segment<const char*, seqan::PrefixSegment>' has user-provided 'seqan::Segment<THost, seqan::PrefixSegment>& seqan::Segment<THost, seqan::PrefixSegment>::operator=(const seqan::Segment<THost, seqan::PrefixSegment>&) [with THost_ = const char*]'
  117 |     operator = (Segment const & source)
      |     ^~~~~~~~
[100%] Linking CXX executable ../../bin/pair_align
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align && /usr/bin/cmake -E cmake_link_script CMakeFiles/pair_align.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.4.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2  -W -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/pair_align.dir/pair_align.cpp.o -o ../../bin/pair_align  lib/libpair_align_lib.a -lrt -lz -lbz2
make[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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#cd obj-x86_64-linux-gnu; make dox # This does nothing and no *.html files will be created at all
# This ends up in:
# Could not import extension sphinxcontrib.bibtex (exception: No module named sphinxcontrib.bibtex)
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[  1%] Built target mason_sim
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Consolidate compiler generated dependencies of target pair_align_global_0001
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/DependInfo.cmake "--color="
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Consolidate compiler generated dependencies of target pair_align_global_0100
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/DependInfo.cmake "--color="
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make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/depend
Dependencies file "apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/compiler_depend.internal".
make  -f apps/param_chooser/CMakeFiles/param_chooser.dir/build.make apps/param_chooser/CMakeFiles/param_chooser.dir/depend
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Dependencies file "apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/compiler_depend.internal".
Dependencies file "apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/compiler_depend.internal".
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make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/build
make  -f apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/param_chooser/CMakeFiles/param_chooser.dir/build.make apps/param_chooser/CMakeFiles/param_chooser.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_funcs_param_chooser
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/build.make apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/param_chooser/CMakeFiles/param_chooser.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target pair_align_global_1011
[  2%] Built target pair_align_global_1001
[  2%] Built target pair_align_global_1010
[  2%] Built target pair_align_global_1101
make  -f apps/rabema/CMakeFiles/rabema_prepare_sam.dir/build.make apps/rabema/CMakeFiles/rabema_prepare_sam.dir/depend
[  2%] Built target pair_align_global_1100
[  2%] Built target pair_align_global_1110
make  -f apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build.make apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_prepare_sam.dir/DependInfo.cmake "--color="
[  2%] Built target param_chooser
make  -f apps/rabema/CMakeFiles/rabema_evaluate.dir/build.make apps/rabema/CMakeFiles/rabema_evaluate.dir/depend
make  -f apps/rabema/CMakeFiles/rabema_do_search.dir/build.make apps/rabema/CMakeFiles/rabema_do_search.dir/depend
make  -f apps/razers/CMakeFiles/razers.dir/build.make apps/razers/CMakeFiles/razers.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/DependInfo.cmake "--color="
make  -f apps/razers3/CMakeFiles/razers3.dir/build.make apps/razers3/CMakeFiles/razers3.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_evaluate.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers/CMakeFiles/razers.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_do_search.dir/DependInfo.cmake "--color="
make  -f apps/razers3/CMakeFiles/razers3_simulate_reads.dir/build.make apps/razers3/CMakeFiles/razers3_simulate_reads.dir/depend
[  2%] Built target test_funcs_param_chooser
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/razers3/CMakeFiles/razers3_quality2prob.dir/build.make apps/razers3/CMakeFiles/razers3_quality2prob.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3_simulate_reads.dir/DependInfo.cmake "--color="
Dependencies file "apps/rabema/CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_prepare_sam.dir/compiler_depend.internal".
Dependencies file "apps/rabema/CMakeFiles/rabema_do_search.dir/do_search.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_do_search.dir/compiler_depend.internal".
make  -f apps/rep_sep/CMakeFiles/rep_sep.dir/build.make apps/rep_sep/CMakeFiles/rep_sep.dir/depend
Dependencies file "apps/razers/CMakeFiles/razers.dir/param_tabs.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers/CMakeFiles/razers.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3_quality2prob.dir/DependInfo.cmake "--color="
Dependencies file "apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rep_sep /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rep_sep /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rep_sep/CMakeFiles/rep_sep.dir/DependInfo.cmake "--color="
make  -f apps/sam2matrix/CMakeFiles/sam2matrix.dir/build.make apps/sam2matrix/CMakeFiles/sam2matrix.dir/depend
Dependencies file "apps/rabema/CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema/CMakeFiles/rabema_evaluate.dir/compiler_depend.internal".
Dependencies file "apps/razers/CMakeFiles/razers.dir/razers.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers/CMakeFiles/razers.dir/compiler_depend.internal".
make  -f apps/samcat/CMakeFiles/samcat.dir/build.make apps/samcat/CMakeFiles/samcat.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak/CMakeFiles/sak.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/samcat /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/samcat/CMakeFiles/samcat.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target rabema_prepare_sam
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sam2matrix /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sam2matrix/CMakeFiles/sam2matrix.dir/DependInfo.cmake "--color="
Dependencies file "apps/razers3/CMakeFiles/razers3.dir/param_tabs.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3.dir/compiler_depend.internal".
Dependencies file "apps/razers3/CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3_simulate_reads.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/rabema/CMakeFiles/rabema_prepare_sam.dir/build.make apps/rabema/CMakeFiles/rabema_prepare_sam.dir/build
Dependencies file "apps/razers3/CMakeFiles/razers3.dir/razers.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3.dir/compiler_depend.internal".
Dependencies file "apps/razers3/CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3/CMakeFiles/razers3_quality2prob.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target rabema_do_search
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target rabema_evaluate
Dependencies file "apps/samcat/CMakeFiles/samcat.dir/samcat.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/samcat/CMakeFiles/samcat.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target rabema_build_gold_standard
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target razers3_simulate_reads
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Consolidate compiler generated dependencies of target razers3_quality2prob
make  -f apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build.make apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build
Consolidate compiler generated dependencies of target samcat
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "apps/rep_sep/CMakeFiles/rep_sep.dir/rep_sep.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rep_sep/CMakeFiles/rep_sep.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target razers3
make  -f apps/rabema/CMakeFiles/rabema_evaluate.dir/build.make apps/rabema/CMakeFiles/rabema_evaluate.dir/build
Consolidate compiler generated dependencies of target razers
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Dependencies file "apps/sam2matrix/CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sam2matrix/CMakeFiles/sam2matrix.dir/compiler_depend.internal".
make[3]: Nothing to be done for 'apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build'.
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Dependencies file "apps/sak/CMakeFiles/sak.dir/sak.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak/CMakeFiles/sak.dir/compiler_depend.internal".
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Consolidate compiler generated dependencies of target rep_sep
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Consolidate compiler generated dependencies of target sam2matrix
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/razers/CMakeFiles/razers.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/rep_sep/CMakeFiles/rep_sep.dir/build.make apps/rep_sep/CMakeFiles/rep_sep.dir/build
make  -f apps/sam2matrix/CMakeFiles/sam2matrix.dir/build.make apps/sam2matrix/CMakeFiles/sam2matrix.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/razers3/CMakeFiles/razers3_simulate_reads.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/samcat/CMakeFiles/samcat.dir/build.make apps/samcat/CMakeFiles/samcat.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/rep_sep/CMakeFiles/rep_sep.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target sak
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/razers3/CMakeFiles/razers3_quality2prob.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/sam2matrix/CMakeFiles/sam2matrix.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/samcat/CMakeFiles/samcat.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/sak/CMakeFiles/sak.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  2%] Built target rabema_build_gold_standard
[  2%] Built target rabema_evaluate
[  3%] Built target rabema_prepare_sam
[  3%] Built target razers
[  3%] Built target rabema_do_search
[  3%] Built target razers3
[  3%] Built target razers3_simulate_reads
make  -f apps/searchjoin/CMakeFiles/s4_search.dir/build.make apps/searchjoin/CMakeFiles/s4_search.dir/depend
make  -f apps/searchjoin/CMakeFiles/s4_join.dir/build.make apps/searchjoin/CMakeFiles/s4_join.dir/depend
make  -f apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build.make apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin/CMakeFiles/s4_search.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin/CMakeFiles/s4_join.dir/DependInfo.cmake "--color="
[  3%] Built target rep_sep
[  3%] Built target razers3_quality2prob
[  3%] Built target sam2matrix
[  3%] Built target samcat
[  3%] Built target sak
make  -f apps/seqcons2/CMakeFiles/seqcons2.dir/build.make apps/seqcons2/CMakeFiles/seqcons2.dir/depend
make  -f apps/sgip/CMakeFiles/sgip.dir/build.make apps/sgip/CMakeFiles/sgip.dir/depend
make  -f apps/snp_store/CMakeFiles/snp_store.dir/build.make apps/snp_store/CMakeFiles/snp_store.dir/depend
make  -f apps/splazers/CMakeFiles/splazers.dir/build.make apps/splazers/CMakeFiles/splazers.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/stellar/CMakeFiles/stellar.dir/build.make apps/stellar/CMakeFiles/stellar.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sgip /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sgip/CMakeFiles/sgip.dir/DependInfo.cmake "--color="
make  -f apps/tree_recon/CMakeFiles/tree_recon.dir/build.make apps/tree_recon/CMakeFiles/tree_recon.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqan_tcoffee /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2/CMakeFiles/seqcons2.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/snp_store /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/snp_store/CMakeFiles/snp_store.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/stellar /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/stellar/CMakeFiles/stellar.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/splazers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/splazers/CMakeFiles/splazers.dir/DependInfo.cmake "--color="
make  -f apps/yara/CMakeFiles/yara_indexer.dir/build.make apps/yara/CMakeFiles/yara_indexer.dir/depend
Dependencies file "apps/searchjoin/CMakeFiles/s4_join.dir/join.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin/CMakeFiles/s4_join.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/tree_recon /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/tree_recon/CMakeFiles/tree_recon.dir/DependInfo.cmake "--color="
Dependencies file "apps/searchjoin/CMakeFiles/s4_search.dir/search.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin/CMakeFiles/s4_search.dir/compiler_depend.internal".
Dependencies file "apps/sgip/CMakeFiles/sgip.dir/sgip.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sgip/CMakeFiles/sgip.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/yara/CMakeFiles/yara_mapper.dir/build.make apps/yara/CMakeFiles/yara_mapper.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara/CMakeFiles/yara_indexer.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara/CMakeFiles/yara_mapper.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target s4_join
Dependencies file "apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2/CMakeFiles/seqcons2.dir/compiler_depend.internal".
make  -f apps/searchjoin/CMakeFiles/s4_join.dir/build.make apps/searchjoin/CMakeFiles/s4_join.dir/build
Dependencies file "apps/tree_recon/CMakeFiles/tree_recon.dir/tree_recon.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/tree_recon/CMakeFiles/tree_recon.dir/compiler_depend.internal".
Dependencies file "apps/snp_store/CMakeFiles/snp_store.dir/snp_store.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/snp_store/CMakeFiles/snp_store.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target s4_search
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/searchjoin/CMakeFiles/s4_join.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target sgip
make  -f apps/searchjoin/CMakeFiles/s4_search.dir/build.make apps/searchjoin/CMakeFiles/s4_search.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/sgip/CMakeFiles/sgip.dir/build.make apps/sgip/CMakeFiles/sgip.dir/build
Dependencies file "apps/stellar/CMakeFiles/stellar.dir/stellar.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/stellar/CMakeFiles/stellar.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/searchjoin/CMakeFiles/s4_search.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_app.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2/CMakeFiles/seqcons2.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/sgip/CMakeFiles/sgip.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "apps/yara/CMakeFiles/yara_indexer.dir/indexer.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara/CMakeFiles/yara_indexer.dir/compiler_depend.internal".
[  3%] Built target s4_join
Dependencies file "apps/yara/CMakeFiles/yara_mapper.dir/mapper.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara/CMakeFiles/yara_mapper.dir/compiler_depend.internal".
make  -f tests/align/CMakeFiles/test_align.dir/build.make tests/align/CMakeFiles/test_align.dir/depend
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/depend
[  3%] Built target s4_search
Dependencies file "apps/splazers/CMakeFiles/splazers.dir/splazers.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/splazers/CMakeFiles/splazers.dir/compiler_depend.internal".
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/depend
[  4%] Built target sgip
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/depend
Consolidate compiler generated dependencies of target seqan_tcoffee
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build.make apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build
Consolidate compiler generated dependencies of target tree_recon
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/tree_recon/CMakeFiles/tree_recon.dir/build.make apps/tree_recon/CMakeFiles/tree_recon.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/tree_recon/CMakeFiles/tree_recon.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/DependInfo.cmake "--color="
[  4%] Built target seqan_tcoffee
[  4%] Built target tree_recon
Dependencies file "apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_options.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2/CMakeFiles/seqcons2.dir/compiler_depend.internal".
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/depend
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/DependInfo.cmake "--color="
Dependencies file "tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/test_align_simd_local_equal_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/DependInfo.cmake "--color="
Dependencies file "tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/test_align_simd_global_equal_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target yara_mapper
Consolidate compiler generated dependencies of target snp_store
Dependencies file "tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/test_align_simd_local_variable_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/yara/CMakeFiles/yara_mapper.dir/build.make apps/yara/CMakeFiles/yara_mapper.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/snp_store/CMakeFiles/snp_store.dir/build.make apps/snp_store/CMakeFiles/snp_store.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/yara/CMakeFiles/yara_mapper.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/snp_store/CMakeFiles/snp_store.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target stellar
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target yara_indexer
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/stellar/CMakeFiles/stellar.dir/build.make apps/stellar/CMakeFiles/stellar.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_align_simd_global_equal_length_sse4
make  -f apps/yara/CMakeFiles/yara_indexer.dir/build.make apps/yara/CMakeFiles/yara_indexer.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/build
[  5%] Built target yara_mapper
Consolidate compiler generated dependencies of target splazers
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/depend
[  5%] Built target snp_store
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/DependInfo.cmake "--color="
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/splazers/CMakeFiles/splazers.dir/build.make apps/splazers/CMakeFiles/splazers.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/stellar/CMakeFiles/stellar.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/yara/CMakeFiles/yara_indexer.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_global_equal_length_sse4.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/splazers/CMakeFiles/splazers.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_align_simd_local_equal_length
Dependencies file "tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/test_align_simd_global_equal_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/build
Dependencies file "tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/test_align_simd_global_equal_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/compiler_depend.internal".
[  5%] Built target stellar
[  5%] Built target splazers
[  5%] Built target test_align_simd_global_equal_length_sse4
[  5%] Built target yara_indexer
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/depend
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/depend
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_local_equal_length.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_align_simd_local_variable_length
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/DependInfo.cmake "--color="
Dependencies file "tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/test_align_simd_global_variable_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/DependInfo.cmake "--color="
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/build
Dependencies file "tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/test_align_simd_global_variable_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_align_simd_global_equal_length_avx2
Dependencies file "tests/align/CMakeFiles/test_align.dir/test_align.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_local_variable_length.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target seqcons2
Dependencies file "tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/test_align_simd_local_equal_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/compiler_depend.internal".
[  5%] Built target test_align_simd_local_equal_length
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/depend
Consolidate compiler generated dependencies of target test_align_simd_global_variable_length_sse4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_global_equal_length_avx2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/DependInfo.cmake "--color="
make  -f apps/seqcons2/CMakeFiles/seqcons2.dir/build.make apps/seqcons2/CMakeFiles/seqcons2.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/build
Dependencies file "tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/test_align_simd_local_equal_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/compiler_depend.internal".
Dependencies file "tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/test_align_simd_global_variable_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_align_simd_local_equal_length_sse4
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/test_align_simd_local_variable_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/seqcons2/CMakeFiles/seqcons2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  5%] Built target test_align_simd_local_variable_length
Consolidate compiler generated dependencies of target test_align_simd_global_equal_length
Consolidate compiler generated dependencies of target test_align_simd_global_variable_length_avx2
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_align_simd_local_equal_length_avx2
Dependencies file "tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/test_align_simd_local_variable_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/compiler_depend.internal".
make  -f tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/build.make tests/align/CMakeFiles/test_align_simd_global_equal_length.dir/build
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/build
make  -f tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/build
Consolidate compiler generated dependencies of target test_align_simd_local_variable_length_sse4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_global_variable_length_sse4.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_local_equal_length_sse4.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_local_equal_length_avx2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_global_variable_length_avx2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_align_simd_global_variable_length
Consolidate compiler generated dependencies of target test_align
Consolidate compiler generated dependencies of target test_align_simd_local_variable_length_avx2
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_local_variable_length_sse4.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/build.make tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align/CMakeFiles/test_align.dir/build.make tests/align/CMakeFiles/test_align.dir/build
[  5%] Built target seqcons2
make  -f tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/build.make tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/build
[  6%] Built target test_align_simd_global_variable_length_sse4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_global_variable_length.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Built target test_align_simd_global_equal_length_avx2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  6%] Built target test_align_simd_global_equal_length
[  6%] Built target test_align_simd_local_equal_length_sse4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align/CMakeFiles/test_align_simd_local_variable_length_avx2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_extend/CMakeFiles/test_align_extend.dir/build.make tests/align_extend/CMakeFiles/test_align_extend.dir/depend
[  6%] Built target test_align_simd_global_variable_length_avx2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_extend /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_extend /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_extend/CMakeFiles/test_align_extend.dir/DependInfo.cmake "--color="
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/DependInfo.cmake "--color="
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/DependInfo.cmake "--color="
[  7%] Built target test_align_simd_local_variable_length_sse4
[  7%] Built target test_align
[  7%] Built target test_align_simd_global_variable_length
[  7%] Built target test_align_simd_local_equal_length_avx2
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/depend
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/depend
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/depend
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/DependInfo.cmake "--color="
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/DependInfo.cmake "--color="
make  -f tests/align_profile/CMakeFiles/test_align_profile.dir/build.make tests/align_profile/CMakeFiles/test_align_profile.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/DependInfo.cmake "--color="
Dependencies file "tests/align_extend/CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_extend/CMakeFiles/test_align_extend.dir/compiler_depend.internal".
[  7%] Built target test_align_simd_local_variable_length_avx2
make  -f tests/align_split/CMakeFiles/test_align_split.dir/build.make tests/align_split/CMakeFiles/test_align_split.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_profile /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_profile /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_profile/CMakeFiles/test_align_profile.dir/DependInfo.cmake "--color="
Dependencies file "tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/compiler_depend.internal".
Dependencies file "tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/compiler_depend.internal".
Dependencies file "tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/test_align_parallel_interface.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_align_extend
Dependencies file "tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/compiler_depend.internal".
Dependencies file "tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/test_align_parallel_interface.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/compiler_depend.internal".
Dependencies file "tests/align_profile/CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_profile/CMakeFiles/test_align_profile.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_align_parallel_data_structures
Dependencies file "tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/test_align_parallel_algorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_align_parallel_interface_sse4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/align_split /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_split /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_split/CMakeFiles/test_align_split.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_align_parallel_algorithm
make  -f tests/align_extend/CMakeFiles/test_align_extend.dir/build.make tests/align_extend/CMakeFiles/test_align_extend.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_align_parallel_interface
Dependencies file "tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/test_align_parallel_algorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_align_parallel_interface_avx2
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_align_profile
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_align_parallel_algorithm_sse4
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/build
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface_avx2.dir/build
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/build
Dependencies file "tests/align_split/CMakeFiles/test_align_split.dir/test_align_split.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_split/CMakeFiles/test_align_split.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_align_parallel_algorithm_avx2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build'.
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'tests/align_extend/CMakeFiles/test_align_extend.dir/build'.
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make[3]: Nothing to be done for 'tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_profile/CMakeFiles/test_align_profile.dir/build.make tests/align_profile/CMakeFiles/test_align_profile.dir/build
Consolidate compiler generated dependencies of target test_align_split
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_sse4.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align_parallel/CMakeFiles/test_align_parallel_interface_sse4.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/align_split/CMakeFiles/test_align_split.dir/build.make tests/align_split/CMakeFiles/test_align_split.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align_parallel/CMakeFiles/test_align_parallel_algorithm_avx2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align_split/CMakeFiles/test_align_split.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/align_profile/CMakeFiles/test_align_profile.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  7%] Built target test_align_parallel_data_structures
[  7%] Built target test_align_extend
make  -f tests/alignment_free/CMakeFiles/test_alignment_free.dir/build.make tests/alignment_free/CMakeFiles/test_alignment_free.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/arg_parse/CMakeFiles/test_arg_parse.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/alignment_free /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/alignment_free /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/alignment_free/CMakeFiles/test_alignment_free.dir/DependInfo.cmake "--color="
[  7%] Built target test_align_parallel_interface
[  7%] Built target test_align_parallel_interface_avx2
[  7%] Built target test_align_parallel_interface_sse4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse/CMakeFiles/test_arg_parse.dir/DependInfo.cmake "--color="
make  -f tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/depend
[  8%] Built target test_align_parallel_algorithm
make  -f tests/bam_io/CMakeFiles/test_bam_io.dir/build.make tests/bam_io/CMakeFiles/test_bam_io.dir/depend
make  -f tests/basic/CMakeFiles/test_basic_exception.dir/build.make tests/basic/CMakeFiles/test_basic_exception.dir/depend
[  8%] Built target test_align_parallel_algorithm_sse4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/arg_parse /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bam_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bam_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bam_io/CMakeFiles/test_bam_io.dir/DependInfo.cmake "--color="
[  9%] Built target test_align_split
[  9%] Built target test_align_profile
[  9%] Built target test_align_parallel_algorithm_avx2
make  -f tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build.make tests/basic/CMakeFiles/test_basic_metaprogramming.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_exception.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_metaprogramming.dir/DependInfo.cmake "--color="
make  -f tests/basic/CMakeFiles/test_basic_fundamental.dir/build.make tests/basic/CMakeFiles/test_basic_fundamental.dir/depend
make  -f tests/basic/CMakeFiles/test_basic_concept.dir/build.make tests/basic/CMakeFiles/test_basic_concept.dir/depend
make  -f tests/basic/CMakeFiles/test_basic_alphabet.dir/build.make tests/basic/CMakeFiles/test_basic_alphabet.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_fundamental.dir/DependInfo.cmake "--color="
make  -f tests/basic/CMakeFiles/test_basic_aggregate.dir/build.make tests/basic/CMakeFiles/test_basic_aggregate.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_concept.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_alphabet.dir/DependInfo.cmake "--color="
Dependencies file "tests/arg_parse/CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse/CMakeFiles/test_arg_parse.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_aggregate.dir/DependInfo.cmake "--color="
make  -f tests/basic/CMakeFiles/test_basic_allocator.dir/build.make tests/basic/CMakeFiles/test_basic_allocator.dir/depend
Dependencies file "tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/compiler_depend.internal".
Dependencies file "tests/alignment_free/CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/alignment_free/CMakeFiles/test_alignment_free.dir/compiler_depend.internal".
Dependencies file "tests/bam_io/CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bam_io/CMakeFiles/test_bam_io.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_arg_parse
Dependencies file "tests/basic/CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_fundamental.dir/compiler_depend.internal".
Dependencies file "tests/basic/CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_exception.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/arg_parse/CMakeFiles/test_arg_parse.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse.dir/build
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_allocator.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_arg_parse_version_check
Dependencies file "tests/basic/CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_concept.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_basic_fundamental
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_basic_exception
make  -f tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/basic/CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_metaprogramming.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/arg_parse/CMakeFiles/test_arg_parse.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_alignment_free
make  -f tests/basic/CMakeFiles/test_basic_exception.dir/build.make tests/basic/CMakeFiles/test_basic_exception.dir/build
make  -f tests/basic/CMakeFiles/test_basic_fundamental.dir/build.make tests/basic/CMakeFiles/test_basic_fundamental.dir/build
Consolidate compiler generated dependencies of target test_basic_concept
Consolidate compiler generated dependencies of target test_bam_io
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/alignment_free/CMakeFiles/test_alignment_free.dir/build.make tests/alignment_free/CMakeFiles/test_alignment_free.dir/build
make  -f tests/bam_io/CMakeFiles/test_bam_io.dir/build.make tests/bam_io/CMakeFiles/test_bam_io.dir/build
Consolidate compiler generated dependencies of target test_basic_metaprogramming
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_exception.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_concept.dir/build.make tests/basic/CMakeFiles/test_basic_concept.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/basic/CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_allocator.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_fundamental.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/basic/CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_alphabet.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_concept.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/bam_io/CMakeFiles/test_bam_io.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build.make tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build
Consolidate compiler generated dependencies of target test_basic_allocator
Dependencies file "tests/basic/CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_aggregate.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_basic_alphabet
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/alignment_free/CMakeFiles/test_alignment_free.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_allocator.dir/build.make tests/basic/CMakeFiles/test_basic_allocator.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_alphabet.dir/build.make tests/basic/CMakeFiles/test_basic_alphabet.dir/build
Consolidate compiler generated dependencies of target test_basic_aggregate
[  9%] Built target test_arg_parse
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_alphabet.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_allocator.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_arg_parse_version_check
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_aggregate.dir/build.make tests/basic/CMakeFiles/test_basic_aggregate.dir/build
[  9%] Built target test_basic_exception
[  9%] Built target test_basic_fundamental
make  -f tests/basic/CMakeFiles/test_basic_parallelism.dir/build.make tests/basic/CMakeFiles/test_basic_parallelism.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_aggregate.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_math.dir/build.make tests/basic/CMakeFiles/test_basic_math.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_parallelism.dir/DependInfo.cmake "--color="
[  9%] Built target test_alignment_free
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_math.dir/DependInfo.cmake "--color="
make  -f tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build.make tests/basic/CMakeFiles/test_basic_smart_pointer.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  9%] Built target test_basic_concept
make  -f tests/basic/CMakeFiles/test_basic_container.dir/build.make tests/basic/CMakeFiles/test_basic_container.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_smart_pointer.dir/DependInfo.cmake "--color="
[  9%] Built target test_bam_io
[  9%] Built target test_basic_allocator
[  9%] Built target test_basic_metaprogramming
[  9%] Built target test_basic_alphabet
make  -f tests/basic/CMakeFiles/test_basic_proxy.dir/build.make tests/basic/CMakeFiles/test_basic_proxy.dir/depend
make  -f tests/basic/CMakeFiles/test_basic_iterator.dir/build.make tests/basic/CMakeFiles/test_basic_iterator.dir/depend
make  -f tests/bed_io/CMakeFiles/test_bed_io.dir/build.make tests/bed_io/CMakeFiles/test_bed_io.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_container.dir/DependInfo.cmake "--color="
make  -f tests/blast/CMakeFiles/test_blast.dir/build.make tests/blast/CMakeFiles/test_blast.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_iterator.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/bed_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bed_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bed_io/CMakeFiles/test_bed_io.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_proxy.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/consensus/CMakeFiles/test_consensus.dir/build.make tests/consensus/CMakeFiles/test_consensus.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/blast /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/blast /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/blast/CMakeFiles/test_blast.dir/DependInfo.cmake "--color="
[ 10%] Built target test_basic_aggregate
Dependencies file "tests/basic/CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_parallelism.dir/compiler_depend.internal".
Dependencies file "tests/basic/CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_math.dir/compiler_depend.internal".
Dependencies file "tests/basic/CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_smart_pointer.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_basic_math
Consolidate compiler generated dependencies of target test_basic_parallelism
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/basic/CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_iterator.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus/CMakeFiles/test_consensus.dir/DependInfo.cmake "--color="
make  -f tests/basic/CMakeFiles/test_basic_parallelism.dir/build.make tests/basic/CMakeFiles/test_basic_parallelism.dir/build
make  -f tests/basic/CMakeFiles/test_basic_math.dir/build.make tests/basic/CMakeFiles/test_basic_math.dir/build
Consolidate compiler generated dependencies of target test_basic_smart_pointer
make  -f tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build.make tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/depend
Dependencies file "tests/basic/CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_proxy.dir/compiler_depend.internal".
Dependencies file "tests/bed_io/CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bed_io/CMakeFiles/test_bed_io.dir/compiler_depend.internal".
Dependencies file "tests/basic/CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic/CMakeFiles/test_basic_container.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_basic_iterator
Dependencies file "tests/blast/CMakeFiles/test_blast.dir/test_blast.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/blast/CMakeFiles/test_blast.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/consensus_v2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus_v2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_parallelism.dir/build'.
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_math.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build.make tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build
make  -f tests/basic/CMakeFiles/test_basic_iterator.dir/build.make tests/basic/CMakeFiles/test_basic_iterator.dir/build
Consolidate compiler generated dependencies of target test_basic_proxy
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_proxy.dir/build.make tests/basic/CMakeFiles/test_basic_proxy.dir/build
Consolidate compiler generated dependencies of target test_basic_container
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_iterator.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_bed_io
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_proxy.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/basic/CMakeFiles/test_basic_container.dir/build.make tests/basic/CMakeFiles/test_basic_container.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/bed_io/CMakeFiles/test_bed_io.dir/build.make tests/bed_io/CMakeFiles/test_bed_io.dir/build
Consolidate compiler generated dependencies of target test_blast
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/basic/CMakeFiles/test_basic_container.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/consensus/CMakeFiles/test_consensus.dir/test_consensus.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus/CMakeFiles/test_consensus.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/blast/CMakeFiles/test_blast.dir/build.make tests/blast/CMakeFiles/test_blast.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/bed_io/CMakeFiles/test_bed_io.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/compiler_depend.internal".
[ 10%] Built target test_basic_parallelism
[ 10%] Built target test_basic_math
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/blast/CMakeFiles/test_blast.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/find/CMakeFiles/test_find.dir/build.make tests/find/CMakeFiles/test_find.dir/depend
[ 11%] Built target test_basic_iterator
[ 11%] Built target test_basic_proxy
make  -f tests/gff_io/CMakeFiles/test_gff_io.dir/build.make tests/gff_io/CMakeFiles/test_gff_io.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/find /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/find /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/find/CMakeFiles/test_find.dir/DependInfo.cmake "--color="
[ 12%] Built target test_basic_smart_pointer
Consolidate compiler generated dependencies of target test_consensus
make  -f tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build.make tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/gff_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/gff_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/gff_io/CMakeFiles/test_gff_io.dir/DependInfo.cmake "--color="
make  -f tests/graph_align/CMakeFiles/test_graph_align.dir/build.make tests/graph_align/CMakeFiles/test_graph_align.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_msa/CMakeFiles/test_graph_msa.dir/build.make tests/graph_msa/CMakeFiles/test_graph_msa.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_algorithms /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_algorithms /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/DependInfo.cmake "--color="
make  -f tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/depend
[ 12%] Built target test_basic_container
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_align/CMakeFiles/test_graph_align.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_consensus_v2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_msa /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_msa /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_msa/CMakeFiles/test_graph_msa.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/DependInfo.cmake "--color="
make  -f tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_derived.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Built target test_blast
[ 12%] Built target test_bed_io
Dependencies file "tests/find/CMakeFiles/test_find.dir/test_find.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/find/CMakeFiles/test_find.dir/compiler_depend.internal".
make  -f tests/consensus/CMakeFiles/test_consensus.dir/build.make tests/consensus/CMakeFiles/test_consensus.dir/build
Dependencies file "tests/gff_io/CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/gff_io/CMakeFiles/test_gff_io.dir/compiler_depend.internal".
make  -f tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build.make tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build
Consolidate compiler generated dependencies of target test_find
Dependencies file "tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_derived.dir/DependInfo.cmake "--color="
Dependencies file "tests/graph_msa/CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_msa/CMakeFiles/test_graph_msa.dir/compiler_depend.internal".
Dependencies file "tests/graph_align/CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_align/CMakeFiles/test_graph_align.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/find/CMakeFiles/test_find.dir/build.make tests/find/CMakeFiles/test_find.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/consensus/CMakeFiles/test_consensus.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_graph_types_property_map
Consolidate compiler generated dependencies of target test_gff_io
make  -f tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/depend
Consolidate compiler generated dependencies of target test_graph_align
Consolidate compiler generated dependencies of target test_graph_msa
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/DependInfo.cmake "--color="
make  -f tests/graph_types/CMakeFiles/test_graph_types_types.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_types.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/gff_io/CMakeFiles/test_gff_io.dir/build.make tests/gff_io/CMakeFiles/test_gff_io.dir/build
make[3]: Nothing to be done for 'tests/find/CMakeFiles/test_find.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_types.dir/DependInfo.cmake "--color="
make  -f tests/graph_align/CMakeFiles/test_graph_align.dir/build.make tests/graph_align/CMakeFiles/test_graph_align.dir/build
Dependencies file "tests/graph_types/CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_derived.dir/compiler_depend.internal".
make  -f tests/graph_msa/CMakeFiles/test_graph_msa.dir/build.make tests/graph_msa/CMakeFiles/test_graph_msa.dir/build
make  -f tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build
Consolidate compiler generated dependencies of target test_graph_algorithms
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/gff_io/CMakeFiles/test_gff_io.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/graph_align/CMakeFiles/test_graph_align.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 12%] Built target test_consensus_v2
make  -f tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build.make tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/graph_msa/CMakeFiles/test_graph_msa.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_graph_types_derived
[ 12%] Built target test_consensus
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/graph_types/CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_types.dir/compiler_depend.internal".
[ 13%] Built target test_find
Dependencies file "tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/compiler_depend.internal".
make  -f tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_utils.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_utils.dir/DependInfo.cmake "--color="
make  -f tests/index/CMakeFiles/test_index_creation.dir/build.make tests/index/CMakeFiles/test_index_creation.dir/depend
Consolidate compiler generated dependencies of target test_graph_types_types
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_char.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_creation.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_char.dir/DependInfo.cmake "--color="
[ 13%] Built target test_graph_msa
Consolidate compiler generated dependencies of target test_graph_types_iterators
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 13%] Built target test_graph_align
make  -f tests/graph_types/CMakeFiles/test_graph_types_types.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_types.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/DependInfo.cmake "--color="
[ 15%] Built target test_graph_algorithms
[ 15%] Built target test_gff_io
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build
[ 15%] Built target test_graph_types_derived
[ 15%] Built target test_graph_types_property_map
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/graph_types/CMakeFiles/test_graph_types_types.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna.dir/depend
make[3]: Nothing to be done for 'tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/depend
make  -f tests/index/CMakeFiles/test_index_qgram.dir/build.make tests/index/CMakeFiles/test_index_qgram.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_dna.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/DependInfo.cmake "--color="
Dependencies file "tests/graph_types/CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_utils.dir/compiler_depend.internal".
Dependencies file "tests/index/CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_creation.dir/compiler_depend.internal".
make  -f tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build.make tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_qgram.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_graph_types_utils
Dependencies file "tests/index/CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_char.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_index_creation
[ 16%] Built target test_graph_types_types
make  -f tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/DependInfo.cmake "--color="
[ 16%] Built target test_graph_types_iterators
make  -f tests/index/CMakeFiles/test_index_shapes.dir/build.make tests/index/CMakeFiles/test_index_shapes.dir/depend
Dependencies file "tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/compiler_depend.internal".
Dependencies file "tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/compiler_depend.internal".
make  -f tests/index/CMakeFiles/test_index_drawing.dir/build.make tests/index/CMakeFiles/test_index_drawing.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_shapes.dir/DependInfo.cmake "--color="
Dependencies file "tests/index/CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_dna.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build.make tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_drawing.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/index/CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_qgram.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_creation.dir/build.make tests/index/CMakeFiles/test_index_creation.dir/build
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_index_crosscompare_char
Dependencies file "tests/index/CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_shapes.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_index_crosscompare_dna_dfi
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build.make tests/index/CMakeFiles/test_index_fm_sparse_string.dir/depend
Consolidate compiler generated dependencies of target test_index_crosscompare_char_dfi
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_creation.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/compiler_depend.internal".
make  -f tests/index/CMakeFiles/test_index_crosscompare_char.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char.dir/build
Consolidate compiler generated dependencies of target test_index_crosscompare_dna
make  -f tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_fm_sparse_string.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_index_qgram
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build
Consolidate compiler generated dependencies of target test_index_shapes
Dependencies file "tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_crosscompare_char.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_qgram.dir/build.make tests/index/CMakeFiles/test_index_qgram.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_shapes.dir/build.make tests/index/CMakeFiles/test_index_shapes.dir/build
Consolidate compiler generated dependencies of target test_index_sa_bwtwalk
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/index/CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_fm_sparse_string.dir/compiler_depend.internal".
[ 16%] Built target test_graph_types_utils
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_qgram.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build.make tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build
Dependencies file "tests/index/CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_drawing.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_shapes.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_index_fm_rank_dictionary
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build.make tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_index_fm_sparse_string
Consolidate compiler generated dependencies of target test_index_drawing
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 16%] Built target test_index_creation
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build.make tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build
[ 17%] Built target test_index_crosscompare_dna
[ 17%] Built target test_index_crosscompare_char
[ 17%] Built target test_index_crosscompare_dna_dfi
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_drawing.dir/build.make tests/index/CMakeFiles/test_index_drawing.dir/build
make  -f tests/index/CMakeFiles/test_index_base.dir/build.make tests/index/CMakeFiles/test_index_base.dir/depend
[ 17%] Built target test_index_crosscompare_char_dfi
make  -f tests/index/CMakeFiles/test_index_fm.dir/build.make tests/index/CMakeFiles/test_index_fm.dir/depend
[ 17%] Built target test_index_qgram
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_base.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_fm.dir/DependInfo.cmake "--color="
make  -f tests/index/CMakeFiles/test_index_bifm.dir/build.make tests/index/CMakeFiles/test_index_bifm.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_vstree.dir/build.make tests/index/CMakeFiles/test_index_vstree.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_bifm.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_vstree.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_drawing.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 17%] Built target test_index_shapes
make  -f tests/index/CMakeFiles/test_index_view.dir/build.make tests/index/CMakeFiles/test_index_view.dir/depend
[ 17%] Built target test_index_fm_rank_dictionary
[ 17%] Built target test_index_sa_bwtwalk
make  -f tests/index/CMakeFiles/test_index_finder.dir/build.make tests/index/CMakeFiles/test_index_finder.dir/depend
Dependencies file "tests/index/CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_bifm.dir/compiler_depend.internal".
Dependencies file "tests/index/CMakeFiles/test_index_base.dir/test_index_base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_base.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_view.dir/DependInfo.cmake "--color="
Dependencies file "tests/index/CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_fm.dir/compiler_depend.internal".
[ 18%] Built target test_index_fm_sparse_string
Dependencies file "tests/index/CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_vstree.dir/compiler_depend.internal".
make  -f tests/index/CMakeFiles/test_find_backtracking.dir/build.make tests/index/CMakeFiles/test_find_backtracking.dir/depend
[ 18%] Built target test_index_drawing
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_finder.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_find2_index_approx.dir/build.make tests/index/CMakeFiles/test_find2_index_approx.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_find_backtracking.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_find2_index_approx.dir/DependInfo.cmake "--color="
make  -f tests/index/CMakeFiles/test_index_repeats.dir/build.make tests/index/CMakeFiles/test_index_repeats.dir/depend
make  -f tests/index/CMakeFiles/test_index_swift.dir/build.make tests/index/CMakeFiles/test_index_swift.dir/depend
Consolidate compiler generated dependencies of target test_index_bifm
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/journaled_set/CMakeFiles/test_journaled_set.dir/build.make tests/journaled_set/CMakeFiles/test_journaled_set.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_swift.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_repeats.dir/DependInfo.cmake "--color="
make  -f tests/index/CMakeFiles/test_index_bifm.dir/build.make tests/index/CMakeFiles/test_index_bifm.dir/build
Consolidate compiler generated dependencies of target test_index_base
Dependencies file "tests/index/CMakeFiles/test_index_view.dir/test_index_view.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_view.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_set /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_set /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_set/CMakeFiles/test_journaled_set.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_index_fm
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_index_vstree
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_base.dir/build.make tests/index/CMakeFiles/test_index_base.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/index/CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_find_backtracking.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_index_view
Dependencies file "tests/index/CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_repeats.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/index/CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_finder.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_find_backtracking
Dependencies file "tests/index/CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_index_swift.dir/compiler_depend.internal".
make  -f tests/index/CMakeFiles/test_index_fm.dir/build.make tests/index/CMakeFiles/test_index_fm.dir/build
Dependencies file "tests/journaled_set/CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_set/CMakeFiles/test_journaled_set.dir/compiler_depend.internal".
make  -f tests/index/CMakeFiles/test_index_vstree.dir/build.make tests/index/CMakeFiles/test_index_vstree.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_bifm.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_index_repeats
make  -f tests/index/CMakeFiles/test_index_view.dir/build.make tests/index/CMakeFiles/test_index_view.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_base.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_fm.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_find_backtracking.dir/build.make tests/index/CMakeFiles/test_find_backtracking.dir/build
Dependencies file "tests/index/CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index/CMakeFiles/test_find2_index_approx.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_index_finder
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_vstree.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_repeats.dir/build.make tests/index/CMakeFiles/test_index_repeats.dir/build
Consolidate compiler generated dependencies of target test_index_swift
Consolidate compiler generated dependencies of target test_journaled_set
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_finder.dir/build.make tests/index/CMakeFiles/test_index_finder.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_index_swift.dir/build.make tests/index/CMakeFiles/test_index_swift.dir/build
make  -f tests/journaled_set/CMakeFiles/test_journaled_set.dir/build.make tests/journaled_set/CMakeFiles/test_journaled_set.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_find_backtracking.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_view.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_find2_index_approx
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_repeats.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_swift.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_index_finder.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/index/CMakeFiles/test_find2_index_approx.dir/build.make tests/index/CMakeFiles/test_find2_index_approx.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/journaled_set/CMakeFiles/test_journaled_set.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/index/CMakeFiles/test_find2_index_approx.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 18%] Built target test_index_base
[ 18%] Built target test_index_bifm
[ 19%] Built target test_find_backtracking
[ 19%] Built target test_index_view
[ 19%] Built target test_index_vstree
[ 19%] Built target test_index_fm
make  -f tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build.make tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/depend
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/depend
make  -f tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build.make tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/DependInfo.cmake "--color="
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/DependInfo.cmake "--color="
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/depend
[ 19%] Built target test_index_repeats
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/DependInfo.cmake "--color="
make  -f tests/map/CMakeFiles/test_map.dir/build.make tests/map/CMakeFiles/test_map.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/misc/CMakeFiles/test_misc.dir/build.make tests/misc/CMakeFiles/test_misc.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/map /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/map /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/map/CMakeFiles/test_map.dir/DependInfo.cmake "--color="
[ 19%] Built target test_index_finder
[ 19%] Built target test_journaled_set
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/misc /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/misc /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/misc/CMakeFiles/test_misc.dir/DependInfo.cmake "--color="
[ 19%] Built target test_index_swift
[ 19%] Built target test_find2_index_approx
make  -f tests/modifier/CMakeFiles/test_modifier.dir/build.make tests/modifier/CMakeFiles/test_modifier.dir/depend
make  -f tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build.make tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/depend
Dependencies file "tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier/CMakeFiles/test_modifier.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/modifier_cyclic_shape /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier_cyclic_shape /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/DependInfo.cmake "--color="
make  -f tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build.make tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/depend
Dependencies file "tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/compiler_depend.internal".
Dependencies file "tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/compiler_depend.internal".
Dependencies file "tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/multiple_translation_units /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_journaled_string_tree
make  -f tests/parallel/CMakeFiles/test_parallel.dir/build.make tests/parallel/CMakeFiles/test_parallel.dir/depend
Dependencies file "tests/map/CMakeFiles/test_map.dir/test_map.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/map/CMakeFiles/test_map.dir/compiler_depend.internal".
Dependencies file "tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/modifier/CMakeFiles/test_modifier.dir/test_modifier.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier/CMakeFiles/test_modifier.dir/compiler_depend.internal".
Dependencies file "tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_basic_observable
Consolidate compiler generated dependencies of target test_delta_map
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_journaled_string_tree_find
Dependencies file "tests/misc/CMakeFiles/test_misc.dir/test_misc.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/misc/CMakeFiles/test_misc.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_map
Consolidate compiler generated dependencies of target test_modifier
Consolidate compiler generated dependencies of target test_modifier_cyclic_shape
Consolidate compiler generated dependencies of target test_journaled_string_tree_traverser
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build.make tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parallel /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parallel/CMakeFiles/test_parallel.dir/DependInfo.cmake "--color="
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build
make  -f tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build.make tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build
make  -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build
Consolidate compiler generated dependencies of target test_misc
make  -f tests/map/CMakeFiles/test_map.dir/build.make tests/map/CMakeFiles/test_map.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/misc/CMakeFiles/test_misc.dir/build.make tests/misc/CMakeFiles/test_misc.dir/build
Dependencies file "tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/compiler_depend.internal".
make  -f tests/modifier/CMakeFiles/test_modifier.dir/build.make tests/modifier/CMakeFiles/test_modifier.dir/build
make  -f tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build.make tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build
Dependencies file "tests/parallel/CMakeFiles/test_parallel.dir/test_parallel.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parallel/CMakeFiles/test_parallel.dir/compiler_depend.internal".
Dependencies file "tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/map/CMakeFiles/test_map.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/modifier/CMakeFiles/test_modifier.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/misc/CMakeFiles/test_misc.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_parallel
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/parallel/CMakeFiles/test_parallel.dir/build.make tests/parallel/CMakeFiles/test_parallel.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/parallel/CMakeFiles/test_parallel.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 19%] Built target test_delta_map
[ 19%] Built target test_journaled_string_tree
[ 19%] Built target test_basic_observable
[ 19%] Built target test_journaled_string_tree_traverser
[ 19%] Built target test_misc
make  -f tests/parse_lm/CMakeFiles/test_parse_lm.dir/build.make tests/parse_lm/CMakeFiles/test_parse_lm.dir/depend
make  -f tests/pipe/CMakeFiles/test_pipe.dir/build.make tests/pipe/CMakeFiles/test_pipe.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/parse_lm /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parse_lm /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parse_lm/CMakeFiles/test_parse_lm.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/pipe /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/pipe /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/pipe/CMakeFiles/test_pipe.dir/DependInfo.cmake "--color="
make  -f tests/platform/CMakeFiles/test_platform.dir/build.make tests/platform/CMakeFiles/test_platform.dir/depend
[ 19%] Built target test_journaled_string_tree_find
make  -f tests/random/CMakeFiles/test_random.dir/build.make tests/random/CMakeFiles/test_random.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_multiple_translation_units
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/platform /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/platform /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/platform/CMakeFiles/test_platform.dir/DependInfo.cmake "--color="
[ 19%] Built target test_modifier
[ 20%] Built target test_map
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/realign/CMakeFiles/test_realign.dir/build.make tests/realign/CMakeFiles/test_realign.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/random /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/random /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/random/CMakeFiles/test_random.dir/DependInfo.cmake "--color="
make  -f tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build.make tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/depend
[ 20%] Built target test_modifier_cyclic_shape
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/realign /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/realign /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/realign/CMakeFiles/test_realign.dir/DependInfo.cmake "--color="
make  -f tests/rna_io/CMakeFiles/test_rna_io.dir/build.make tests/rna_io/CMakeFiles/test_rna_io.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/reduced_aminoacid /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/reduced_aminoacid /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/DependInfo.cmake "--color="
make  -f tests/roi_io/CMakeFiles/test_roi_io.dir/build.make tests/roi_io/CMakeFiles/test_roi_io.dir/depend
[ 20%] Built target test_parallel
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/rna_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/rna_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/rna_io/CMakeFiles/test_rna_io.dir/DependInfo.cmake "--color="
make  -f tests/score/CMakeFiles/test_score.dir/build.make tests/score/CMakeFiles/test_score.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/roi_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/roi_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/roi_io/CMakeFiles/test_roi_io.dir/DependInfo.cmake "--color="
make  -f tests/seeds/CMakeFiles/test_seeds_combination.dir/build.make tests/seeds/CMakeFiles/test_seeds_combination.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/score /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/score /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/score/CMakeFiles/test_score.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_combination.dir/DependInfo.cmake "--color="
make  -f tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build.make tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build
Dependencies file "tests/parse_lm/CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parse_lm/CMakeFiles/test_parse_lm.dir/compiler_depend.internal".
Dependencies file "tests/pipe/CMakeFiles/test_pipe.dir/test_pipe.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/pipe/CMakeFiles/test_pipe.dir/compiler_depend.internal".
Dependencies file "tests/platform/CMakeFiles/test_platform.dir/test_platform.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/platform/CMakeFiles/test_platform.dir/compiler_depend.internal".
Dependencies file "tests/rna_io/CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/rna_io/CMakeFiles/test_rna_io.dir/compiler_depend.internal".
Dependencies file "tests/realign/CMakeFiles/test_realign.dir/test_realign.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/realign/CMakeFiles/test_realign.dir/compiler_depend.internal".
Dependencies file "tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_platform
Consolidate compiler generated dependencies of target test_parse_lm
Dependencies file "tests/score/CMakeFiles/test_score.dir/test_score.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/score/CMakeFiles/test_score.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/parse_lm/CMakeFiles/test_parse_lm.dir/build.make tests/parse_lm/CMakeFiles/test_parse_lm.dir/build
Consolidate compiler generated dependencies of target test_pipe
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_rna_io
Dependencies file "tests/random/CMakeFiles/test_random.dir/test_random.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/random/CMakeFiles/test_random.dir/compiler_depend.internal".
make  -f tests/pipe/CMakeFiles/test_pipe.dir/build.make tests/pipe/CMakeFiles/test_pipe.dir/build
make  -f tests/platform/CMakeFiles/test_platform.dir/build.make tests/platform/CMakeFiles/test_platform.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_reduced_aminoacid
make  -f tests/rna_io/CMakeFiles/test_rna_io.dir/build.make tests/rna_io/CMakeFiles/test_rna_io.dir/build
Consolidate compiler generated dependencies of target test_realign
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_score
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build.make tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build
make[3]: Nothing to be done for 'tests/platform/CMakeFiles/test_platform.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/parse_lm/CMakeFiles/test_parse_lm.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_random
Dependencies file "tests/seeds/CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_combination.dir/compiler_depend.internal".
make  -f tests/score/CMakeFiles/test_score.dir/build.make tests/score/CMakeFiles/test_score.dir/build
Dependencies file "tests/roi_io/CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/roi_io/CMakeFiles/test_roi_io.dir/compiler_depend.internal".
make  -f tests/realign/CMakeFiles/test_realign.dir/build.make tests/realign/CMakeFiles/test_realign.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/pipe/CMakeFiles/test_pipe.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/random/CMakeFiles/test_random.dir/build.make tests/random/CMakeFiles/test_random.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build'.
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/score/CMakeFiles/test_score.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/rna_io/CMakeFiles/test_rna_io.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_roi_io
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/random/CMakeFiles/test_random.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_seeds_combination
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/realign/CMakeFiles/test_realign.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/roi_io/CMakeFiles/test_roi_io.dir/build.make tests/roi_io/CMakeFiles/test_roi_io.dir/build
make  -f tests/seeds/CMakeFiles/test_seeds_combination.dir/build.make tests/seeds/CMakeFiles/test_seeds_combination.dir/build
[ 20%] Built target test_multiple_translation_units
[ 21%] Built target test_parse_lm
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/roi_io/CMakeFiles/test_roi_io.dir/build'.
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_combination.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 21%] Built target test_pipe
make  -f tests/seeds/CMakeFiles/test_seeds_extension.dir/build.make tests/seeds/CMakeFiles/test_seeds_extension.dir/depend
[ 21%] Built target test_platform
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_extension.dir/DependInfo.cmake "--color="
make  -f tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build.make tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/depend
[ 22%] Built target test_rna_io
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 22%] Built target test_reduced_aminoacid
make  -f tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_base.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_base.dir/DependInfo.cmake "--color="
make  -f tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/depend
make  -f tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/DependInfo.cmake "--color="
[ 22%] Built target test_score
[ 22%] Built target test_roi_io
[ 22%] Built target test_seeds_combination
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/DependInfo.cmake "--color="
[ 22%] Built target test_random
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build.make tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/DependInfo.cmake "--color="
make  -f tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build.make tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/DependInfo.cmake "--color="
[ 22%] Built target test_realign
Dependencies file "tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/DependInfo.cmake "--color="
make  -f tests/seq_io/CMakeFiles/test_seq_io.dir/build.make tests/seq_io/CMakeFiles/test_seq_io.dir/depend
Dependencies file "tests/seeds/CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_base.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/seq_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seq_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seq_io/CMakeFiles/test_seq_io.dir/DependInfo.cmake "--color="
Dependencies file "tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/compiler_depend.internal".
make  -f tests/sequence/CMakeFiles/test_sequence.dir/build.make tests/sequence/CMakeFiles/test_sequence.dir/depend
Dependencies file "tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/compiler_depend.internal".
Dependencies file "tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/compiler_depend.internal".
Dependencies file "tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/compiler_depend.internal".
Dependencies file "tests/seeds/CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_extension.dir/compiler_depend.internal".
Dependencies file "tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_seeds_global_chaining
Dependencies file "tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_seeds_seed_set_base
Consolidate compiler generated dependencies of target test_seeds_seed_base
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/seq_io/CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seq_io/CMakeFiles/test_seq_io.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_seeds_seed_chained
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build.make tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build
Consolidate compiler generated dependencies of target test_seeds_align_banded_chain_impl
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence/CMakeFiles/test_sequence.dir/DependInfo.cmake "--color="
make  -f tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build
Consolidate compiler generated dependencies of target test_seeds_seed_set_unordered
make  -f tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build
make  -f tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build
Consolidate compiler generated dependencies of target test_seeds_extension
Consolidate compiler generated dependencies of target test_seeds_banded_chain_alignment_interface
Consolidate compiler generated dependencies of target test_seeds_seed_diagonal
make  -f tests/sequence/CMakeFiles/test_sequence_v2.dir/build.make tests/sequence/CMakeFiles/test_sequence_v2.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_extension.dir/build.make tests/seeds/CMakeFiles/test_seeds_extension.dir/build
make  -f tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence/CMakeFiles/test_sequence_v2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build.make tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build
Consolidate compiler generated dependencies of target test_seq_io
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build.make tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build
make  -f tests/seq_io/CMakeFiles/test_seq_io.dir/build.make tests/seq_io/CMakeFiles/test_seq_io.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/sequence/CMakeFiles/test_sequence.dir/test_sequence.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence/CMakeFiles/test_sequence.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_extension.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_sequence
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build'.
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/seq_io/CMakeFiles/test_seq_io.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/sequence/CMakeFiles/test_sequence.dir/build.make tests/sequence/CMakeFiles/test_sequence.dir/build
Dependencies file "tests/sequence/CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence/CMakeFiles/test_sequence_v2.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/sequence/CMakeFiles/test_sequence.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_sequence_v2
[ 22%] Built target test_seeds_extension
[ 23%] Built target test_seeds_seed_set_base
[ 23%] Built target test_seeds_global_chaining
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_seed_chained
make  -f tests/sequence/CMakeFiles/test_sequence_v2.dir/build.make tests/sequence/CMakeFiles/test_sequence_v2.dir/build
[ 23%] Built target test_seeds_seed_base
[ 23%] Built target test_seeds_seed_set_unordered
make  -f tests/sequence/CMakeFiles/test_stringset_v2.dir/build.make tests/sequence/CMakeFiles/test_stringset_v2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/sequence/CMakeFiles/test_sequence_v2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence/CMakeFiles/test_stringset_v2.dir/DependInfo.cmake "--color="
[ 23%] Built target test_seeds_align_banded_chain_impl
make  -f tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/build.make tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/depend
make  -f tests/simd/CMakeFiles/test_simd_vector.dir/build.make tests/simd/CMakeFiles/test_simd_vector.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/sequence_journaled /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence_journaled /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/DependInfo.cmake "--color="
make  -f tests/simd/CMakeFiles/test_simd_vector_sse4.dir/build.make tests/simd/CMakeFiles/test_simd_vector_sse4.dir/depend
[ 23%] Built target test_seeds_seed_diagonal
make  -f tests/simd/CMakeFiles/test_simd_vector_avx2.dir/build.make tests/simd/CMakeFiles/test_simd_vector_avx2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 23%] Built target test_seeds_banded_chain_alignment_interface
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector_sse4.dir/DependInfo.cmake "--color="
make  -f tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/build.make tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector_avx2.dir/DependInfo.cmake "--color="
make  -f tests/statistics/CMakeFiles/test_statistics.dir/build.make tests/statistics/CMakeFiles/test_statistics.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/simple_intervals_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simple_intervals_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/store/CMakeFiles/test_store.dir/build.make tests/store/CMakeFiles/test_store.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/statistics /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/statistics /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/statistics/CMakeFiles/test_statistics.dir/DependInfo.cmake "--color="
[ 24%] Built target test_seq_io
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/store /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/store /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/store/CMakeFiles/test_store.dir/DependInfo.cmake "--color="
make  -f tests/stream/CMakeFiles/test_stream.dir/build.make tests/stream/CMakeFiles/test_stream.dir/depend
[ 24%] Built target test_sequence
Dependencies file "tests/sequence/CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence/CMakeFiles/test_stringset_v2.dir/compiler_depend.internal".
[ 24%] Built target test_sequence_v2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/stream /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/stream /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/stream/CMakeFiles/test_stream.dir/DependInfo.cmake "--color="
make  -f tests/swift_local/CMakeFiles/test_find_swift.dir/build.make tests/swift_local/CMakeFiles/test_find_swift.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/tabix_io/CMakeFiles/test_tabix_io.dir/build.make tests/tabix_io/CMakeFiles/test_tabix_io.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/swift_local /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/swift_local /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/swift_local/CMakeFiles/test_find_swift.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/translation/CMakeFiles/test_translation.dir/build.make tests/translation/CMakeFiles/test_translation.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/tabix_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/tabix_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/tabix_io/CMakeFiles/test_tabix_io.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_stringset_v2
Dependencies file "tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/compiler_depend.internal".
Dependencies file "tests/simd/CMakeFiles/test_simd_vector_sse4.dir/test_simd_vector.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector_sse4.dir/compiler_depend.internal".
Dependencies file "tests/simd/CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/simd/CMakeFiles/test_simd_vector_avx2.dir/test_simd_vector.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector_avx2.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/sequence/CMakeFiles/test_stringset_v2.dir/build.make tests/sequence/CMakeFiles/test_stringset_v2.dir/build
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/translation /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/translation /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/translation/CMakeFiles/test_translation.dir/DependInfo.cmake "--color="
Dependencies file "tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/compiler_depend.internal".
Dependencies file "tests/statistics/CMakeFiles/test_statistics.dir/test_statistics.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/statistics/CMakeFiles/test_statistics.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_simd_vector_sse4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/sequence/CMakeFiles/test_stringset_v2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_sequence_journaled
Consolidate compiler generated dependencies of target test_simd_vector_avx2
Dependencies file "tests/tabix_io/CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/tabix_io/CMakeFiles/test_tabix_io.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_simd_vector
make  -f tests/simd/CMakeFiles/test_simd_vector_sse4.dir/build.make tests/simd/CMakeFiles/test_simd_vector_sse4.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target test_simple_intervals_io
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make  -f tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/build.make tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/build
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[ 24%] Built target test_stringset_v2
make  -f tests/simd/CMakeFiles/test_simd_vector_avx2.dir/build.make tests/simd/CMakeFiles/test_simd_vector_avx2.dir/build
Dependencies file "tests/stream/CMakeFiles/test_stream.dir/test_stream.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/stream/CMakeFiles/test_stream.dir/compiler_depend.internal".
make  -f tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/build.make tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/build
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make  -f tests/statistics/CMakeFiles/test_statistics.dir/build.make tests/statistics/CMakeFiles/test_statistics.dir/build
make  -f tests/tabix_io/CMakeFiles/test_tabix_io.dir/build.make tests/tabix_io/CMakeFiles/test_tabix_io.dir/build
Consolidate compiler generated dependencies of target test_stream
Dependencies file "tests/translation/CMakeFiles/test_translation.dir/test_translation.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/translation/CMakeFiles/test_translation.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "tests/store/CMakeFiles/test_store.dir/test_store.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/store/CMakeFiles/test_store.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target test_find_swift
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f tests/stream/CMakeFiles/test_stream.dir/build.make tests/stream/CMakeFiles/test_stream.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target test_translation
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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[ 25%] Built target test_simd_vector_sse4
Consolidate compiler generated dependencies of target test_store
[ 25%] Built target test_sequence_journaled
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'tests/translation/CMakeFiles/test_translation.dir/build'.
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/store/CMakeFiles/test_store.dir/build.make tests/store/CMakeFiles/test_store.dir/build
make  -f tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/build.make tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/depend
[ 25%] Built target test_simd_vector
[ 25%] Built target test_simd_vector_avx2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/ucsc_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/ucsc_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/DependInfo.cmake "--color="
make  -f tests/vcf_io/CMakeFiles/test_vcf_io.dir/build.make tests/vcf_io/CMakeFiles/test_vcf_io.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/build.make demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/tests/vcf_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/vcf_io /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/vcf_io/CMakeFiles/test_vcf_io.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'tests/store/CMakeFiles/test_store.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_align.dir/build.make demos/CMakeFiles/demo_dox_align_align.dir/depend
[ 25%] Built target test_simple_intervals_io
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_align.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/build.make demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/depend
[ 26%] Built target test_tabix_io
[ 26%] Built target test_find_swift
[ 26%] Built target test_statistics
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_align_gaps_example.dir/build.make demos/CMakeFiles/demo_dox_align_gaps_example.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_gaps_example.dir/DependInfo.cmake "--color="
[ 26%] Built target test_stream
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/depend
Dependencies file "demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/compiler_depend.internal".
[ 26%] Built target test_store
make  -f demos/CMakeFiles/demo_dox_align_integrate_align.dir/build.make demos/CMakeFiles/demo_dox_align_integrate_align.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/compiler_depend.internal".
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_integrate_align.dir/DependInfo.cmake "--color="
[ 26%] Built target test_translation
Dependencies file "demos/CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_align.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target test_ucsc_io
Consolidate compiler generated dependencies of target demo_blast_blast_in_lowlevel
Dependencies file "demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/compiler_depend.internal".
Dependencies file "tests/vcf_io/CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/vcf_io/CMakeFiles/test_vcf_io.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_gaps_example.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_align_align
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/build.make tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/build
Consolidate compiler generated dependencies of target test_vcf_io
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_dox_align_compute_alignment_stats
make  -f demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/build.make demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_align.dir/build.make demos/CMakeFiles/demo_dox_align_align.dir/build
Consolidate compiler generated dependencies of target demo_dox_align_gaps_example
make  -f tests/vcf_io/CMakeFiles/test_vcf_io.dir/build.make tests/vcf_io/CMakeFiles/test_vcf_io.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_dox_align_gaps_example.dir/build.make demos/CMakeFiles/demo_dox_align_gaps_example.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_integrate_align.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_align_global_alignment_unbanded
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_dox_align_extend_extend_alignment
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Dependencies file "demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_align_integrate_align
[ 26%] Built target test_ucsc_io
Consolidate compiler generated dependencies of target demo_dox_align_profile_profile_seq_frac_score
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_dox_align_profile_profile_seq_score
[ 26%] Built target demo_dox_align_compute_alignment_stats
make  -f demos/CMakeFiles/demo_dox_align_integrate_align.dir/build.make demos/CMakeFiles/demo_dox_align_integrate_align.dir/build
[ 26%] Built target test_vcf_io
make  -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 26%] Built target demo_dox_align_align
make  -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build
[ 26%] Built target demo_dox_align_gaps_example
[ 27%] Built target demo_blast_blast_in_lowlevel
make  -f demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/depend
make  -f demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/build.make demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/depend
make  -f demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_enable_if.dir/build.make demos/CMakeFiles/demo_dox_basic_enable_if.dir/depend
[ 27%] Built target demo_dox_align_global_alignment_banded
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_enable_if.dir/DependInfo.cmake "--color="
[ 29%] Built target demo_dox_align_global_alignment_unbanded
Dependencies file "demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/compiler_depend.internal".
[ 29%] Built target demo_dox_align_extend_extend_alignment
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/compiler_depend.internal".
[ 29%] Built target demo_dox_align_integrate_align
[ 29%] Built target demo_dox_align_profile_profile_seq_frac_score
Consolidate compiler generated dependencies of target demo_dox_align_split_split_alignment
Consolidate compiler generated dependencies of target demo_dox_bam_io_bam_file_in
Dependencies file "demos/CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_enable_if.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build.make demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/build
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Built target demo_dox_align_profile_profile_seq_score
Consolidate compiler generated dependencies of target demo_dox_arg_parse_argument_parser
Consolidate compiler generated dependencies of target demo_dox_basic_enable_if
make  -f demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_bam_io_bam_tags_dict
make  -f demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/build.make demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_basic_metaprogramming_math
Dependencies file "demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_basic_enable_if.dir/build.make demos/CMakeFiles/demo_dox_basic_enable_if.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_basic_metaprogramming_logic
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_dox_basic_metaprogramming_switch
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_dox_basic_metaprogramming_control
Dependencies file "demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build.make demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/depend
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make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/build
make  -f demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/compiler_depend.internal".
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_dox_basic_simple_type_construction
[ 29%] Built target demo_dox_align_split_split_alignment
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build.make demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build
[ 29%] Built target demo_dox_bam_io_bam_file_in
[ 29%] Built target demo_dox_basic_enable_if
[ 29%] Built target demo_dox_arg_parse_argument_parser
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 29%] Built target demo_dox_basic_metaprogramming_math
make  -f demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/build.make demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/depend
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Built target demo_dox_bam_io_bam_tags_dict
Consolidate compiler generated dependencies of target demo_dox_basic_zip_iterator
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/build.make demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/depend
make  -f demos/CMakeFiles/demo_dox_find_finder_index.dir/build.make demos/CMakeFiles/demo_dox_find_finder_index.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Built target demo_dox_basic_metaprogramming_logic
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_find_finder_online.dir/build.make demos/CMakeFiles/demo_dox_find_finder_online.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_index.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/build.make demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/build
make  -f demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/build.make demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_online.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/depend
Dependencies file "demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/DependInfo.cmake "--color="
[ 30%] Built target demo_dox_basic_metaprogramming_control
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/depend
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 30%] Built target demo_dox_basic_metaprogramming_switch
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_bed_io_UNUSED_bed_stream_read
[ 31%] Built target demo_dox_basic_simple_type_construction
Dependencies file "demos/CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_index.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build.make demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_online.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/depend
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build'.
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/compiler_depend.internal".
[ 31%] Built target demo_dox_basic_zip_iterator
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/depend
Consolidate compiler generated dependencies of target demo_dox_gff_io_UNUSED_gff_stream_read
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_dox_consensus_consensus_alignment
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/build.make demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/build
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/build.make demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/build
Consolidate compiler generated dependencies of target demo_dox_find_finder_index
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_dox_find_finder_online
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Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_all_pairs_shortest_path
make  -f demos/CMakeFiles/demo_dox_find_finder_index.dir/build.make demos/CMakeFiles/demo_dox_find_finder_index.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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[ 31%] Built target demo_dox_bed_io_UNUSED_bed_stream_read
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Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_find_finder_online.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_depth_first_search
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/compiler_depend.internal".
[ 31%] Built target demo_dox_gff_io_UNUSED_gff_stream_read
[ 31%] Built target demo_dox_consensus_consensus_alignment
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 31%] Built target demo_dox_graph_algorithms_breadth_first_search
[ 31%] Built target demo_dox_find_finder_index
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_dag_shortest_path
[ 31%] Built target demo_dox_find_finder_aho_corasick
[ 31%] Built target demo_dox_graph_algorithms_bellman_ford_algorithm
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_dijkstra
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/depend
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/build
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/depend
[ 31%] Built target demo_dox_graph_algorithms_all_pairs_shortest_path
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/DependInfo.cmake "--color="
[ 32%] Built target demo_dox_find_finder_online
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_floyd_warshall_algorithm
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build'.
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/DependInfo.cmake "--color="
[ 33%] Built target demo_dox_graph_algorithms_depth_first_search
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/depend
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_heaviest_increasing_subsequence
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_ford_fulkerson_algorithm
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build
[ 33%] Built target demo_dox_graph_algorithms_dag_shortest_path
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/compiler_depend.internal".
[ 33%] Built target demo_dox_graph_algorithms_floyd_warshall_algorithm
[ 33%] Built target demo_dox_graph_algorithms_dijkstra
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build.make demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/depend
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_kruskals_algorithm
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/depend
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/depend
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_longest_common_subsequence
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_longest_increasing_subsequence
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_prims_algorithm
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_strongly_connected_components
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_topological_sort
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build
[ 33%] Built target demo_dox_graph_algorithms_ford_fulkerson_algorithm
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Built target demo_dox_graph_algorithms_heaviest_increasing_subsequence
Consolidate compiler generated dependencies of target demo_dox_graph_algorithms_transitive_closure
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 33%] Built target demo_dox_graph_algorithms_kruskals_algorithm
make  -f demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build
Consolidate compiler generated dependencies of target demo_dox_graph_align_graph_align
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/depend
[ 34%] Built target demo_dox_graph_algorithms_longest_increasing_subsequence
make  -f demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build.make demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_graph_types_graph_algo_dijkstra
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_dox_index_UNUSED_shape
make  -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Built target demo_dox_graph_algorithms_longest_common_subsequence
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build'.
make  -f demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Built target demo_dox_graph_algorithms_prims_algorithm
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/DependInfo.cmake "--color="
[ 34%] Built target demo_dox_graph_algorithms_strongly_connected_components
Dependencies file "demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build.make demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 34%] Built target demo_dox_graph_algorithms_topological_sort
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build'.
Dependencies file "demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_counting.dir/build.make demos/CMakeFiles/demo_dox_index_counting.dir/depend
make  -f demos/CMakeFiles/demo_dox_index_find_repeats.dir/build.make demos/CMakeFiles/demo_dox_index_find_repeats.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_finder.dir/build.make demos/CMakeFiles/demo_dox_index_finder.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_find_repeats.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_dox_index_UNUSED_shape_hash
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_finder.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/compiler_depend.internal".
[ 34%] Built target demo_dox_graph_algorithms_transitive_closure
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build
make  -f demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build.make demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_counting.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/DependInfo.cmake "--color="
[ 34%] Built target demo_dox_graph_align_graph_align
Consolidate compiler generated dependencies of target demo_dox_index_UNUSED_shape_hash_next
make  -f demos/CMakeFiles/demo_dox_index_iterator.dir/build.make demos/CMakeFiles/demo_dox_index_iterator.dir/depend
[ 34%] Built target demo_dox_index_UNUSED_shape
Dependencies file "demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_iterator.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_index_iterator_short.dir/build.make demos/CMakeFiles/demo_dox_index_iterator_short.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_graph_types_graph_algo_dijkstra
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_iterator_short.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_dox_index_begin_atEnd_representative_bottomUp
Consolidate compiler generated dependencies of target demo_dox_index_begin_atEnd_representative
make  -f demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build.make demos/CMakeFiles/demo_dox_index_length_countSequences.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_counting.dir/compiler_depend.internal".
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_length_countSequences.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_find_repeats.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_index_begin_range_goDown_representative_repLength
Dependencies file "demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_finder.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_iterator.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build'.
Consolidate compiler generated dependencies of target demo_dox_index_counting
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_index_UNUSED_shape_hash
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "demos/CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_length_countSequences.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build.make demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build
make  -f demos/CMakeFiles/demo_dox_index_counting.dir/build.make demos/CMakeFiles/demo_dox_index_counting.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_iterator_short.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_maxrepeats.dir/depend
Consolidate compiler generated dependencies of target demo_dox_index_getOccurrences_getFrequency_range_getFibre
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_maxrepeats.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build.make demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_index_UNUSED_shape_hash_next
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_counting.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_index_iterator
Consolidate compiler generated dependencies of target demo_dox_index_find_repeats
Consolidate compiler generated dependencies of target demo_dox_index_finder
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_find_repeats.dir/build.make demos/CMakeFiles/demo_dox_index_find_repeats.dir/build
Consolidate compiler generated dependencies of target demo_dox_index_length_countSequences
make  -f demos/CMakeFiles/demo_dox_index_iterator.dir/build.make demos/CMakeFiles/demo_dox_index_iterator.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 35%] Built target demo_dox_index_begin_atEnd_representative
Consolidate compiler generated dependencies of target demo_dox_index_iterator_short
make  -f demos/CMakeFiles/demo_dox_index_finder.dir/build.make demos/CMakeFiles/demo_dox_index_finder.dir/build
[ 35%] Built target demo_dox_index_begin_atEnd_representative_bottomUp
make  -f demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build.make demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build
make  -f demos/CMakeFiles/demo_dox_index_mummy.dir/build.make demos/CMakeFiles/demo_dox_index_mummy.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_iterator.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_iterator_short.dir/build.make demos/CMakeFiles/demo_dox_index_iterator_short.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_mummy.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_maxrepeats.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_find_repeats.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Built target demo_dox_index_begin_range_goDown_representative_repLength
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_finder.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_mums.dir/build.make demos/CMakeFiles/demo_dox_index_mums.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_iterator_short.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 36%] Built target demo_dox_index_counting
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_mums.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_index_node_predicate.dir/build.make demos/CMakeFiles/demo_dox_index_node_predicate.dir/depend
[ 36%] Built target demo_dox_index_getOccurrences_getFrequency_range_getFibre
Consolidate compiler generated dependencies of target demo_dox_index_maxrepeats
make  -f demos/CMakeFiles/demo_dox_index_open_save.dir/build.make demos/CMakeFiles/demo_dox_index_open_save.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_node_predicate.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_mummy.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build.make demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_open_save.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/DependInfo.cmake "--color="
[ 36%] Built target demo_dox_index_iterator
[ 36%] Built target demo_dox_index_finder
[ 36%] Built target demo_dox_index_find_repeats
make  -f demos/CMakeFiles/demo_dox_index_sufarray.dir/build.make demos/CMakeFiles/demo_dox_index_sufarray.dir/depend
[ 36%] Built target demo_dox_index_length_countSequences
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_sufarray.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_iterator_short
Dependencies file "demos/CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_node_predicate.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_index_mummy
Dependencies file "demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build.make demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/depend
make  -f demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build.make demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_mums.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_index_mummy.dir/build.make demos/CMakeFiles/demo_dox_index_mummy.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_open_save.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build.make demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/depend
make  -f demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build.make demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_sufarray.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_index_node_predicate
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_mummy.dir/build'.
Consolidate compiler generated dependencies of target demo_dox_index_shape_hash_init
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_maxrepeats
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_node_predicate.dir/build.make demos/CMakeFiles/demo_dox_index_node_predicate.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/compiler_depend.internal".
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_index_mums
Consolidate compiler generated dependencies of target demo_dox_index_open_save
make  -f demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build.make demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_mums.dir/build.make demos/CMakeFiles/demo_dox_index_mums.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_node_predicate.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_index_sufarray
make  -f demos/CMakeFiles/demo_dox_index_open_save.dir/build.make demos/CMakeFiles/demo_dox_index_open_save.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_sufarray.dir/build.make demos/CMakeFiles/demo_dox_index_sufarray.dir/build
make  -f demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build.make demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/depend
Consolidate compiler generated dependencies of target demo_dox_index_textAt_indexText_saAt_indexRequire
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_dox_index_supermaxrepeats
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build.make demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_mums.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 37%] Built target demo_dox_index_mummy
Dependencies file "demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_open_save.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_misc_get_terminal_size
Consolidate compiler generated dependencies of target demo_dox_misc_enumerate_strings
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_sufarray.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build.make demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build.make demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build
Consolidate compiler generated dependencies of target demo_dox_misc_interval_tree_example
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build.make demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build
[ 37%] Built target demo_dox_index_node_predicate
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Built target demo_dox_index_shape_hash_init
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/compiler_depend.internal".
[ 38%] Built target demo_dox_index_mums
make  -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/depend
[ 38%] Built target demo_dox_index_sufarray
make  -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 38%] Built target demo_dox_index_open_save
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string.dir/DependInfo.cmake "--color="
[ 38%] Built target demo_dox_index_textAt_indexText_saAt_indexRequire
Consolidate compiler generated dependencies of target demo_dox_misc_name_store_cache
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/depend
[ 38%] Built target demo_dox_index_supermaxrepeats
make  -f demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build.make demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/DependInfo.cmake "--color="
[ 39%] Built target demo_dox_misc_interval_tree_example
[ 39%] Built target demo_dox_misc_enumerate_strings
make  -f demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_queue_example.dir/depend
make  -f demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_parallel_queue_example.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/build.make demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/DependInfo.cmake "--color="
[ 39%] Built target demo_dox_misc_get_terminal_size
make  -f demos/CMakeFiles/demo_dox_score_score.dir/build.make demos/CMakeFiles/demo_dox_score_score.dir/depend
make  -f demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_score_score.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_modifier_cyclic_shape
Dependencies file "demos/CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build
Dependencies file "demos/CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_parallel_queue_example.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 39%] Built target demo_dox_misc_name_store_cache
make  -f demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/depend
Consolidate compiler generated dependencies of target demo_dox_modifier_modified_string_mod_view
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_modifier_cyclic_shape_snippets
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_dox_modifier_modified_string
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_pipe_pool_sorter
Consolidate compiler generated dependencies of target demo_dox_parallel_queue_example
Dependencies file "demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_score_score.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_modifier_modified_string_nested
Consolidate compiler generated dependencies of target demo_dox_parallel_splitter_example
Dependencies file "demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build
make  -f demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/build.make demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/build
make  -f demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build
[ 39%] Built target demo_dox_modifier_cyclic_shape
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/build.make demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/depend
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/compiler_depend.internal".
[ 39%] Built target demo_dox_modifier_cyclic_shape_snippets
Dependencies file "demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/depend
[ 39%] Built target demo_dox_modifier_modified_string_mod_view
[ 39%] Built target demo_dox_modifier_modified_string
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/DependInfo.cmake "--color="
[ 39%] Built target demo_dox_pipe_pool_sorter
make  -f demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/depend
[ 40%] Built target demo_dox_modifier_modified_string_nested
make  -f demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/depend
make  -f demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/build.make demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_sequence_segment.dir/build.make demos/CMakeFiles/demo_dox_sequence_segment.dir/depend
[ 40%] Built target demo_dox_parallel_queue_example
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_dox_seeds_seeds_extension
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_segment.dir/DependInfo.cmake "--color="
[ 40%] Built target demo_dox_parallel_splitter_example
make  -f demos/CMakeFiles/demo_dox_sequence_string.dir/build.make demos/CMakeFiles/demo_dox_sequence_string.dir/depend
Consolidate compiler generated dependencies of target demo_dox_score_score
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_string.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_dox_sequence_string2.dir/build.make demos/CMakeFiles/demo_dox_sequence_string2.dir/depend
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_string2.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "demos/CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_string.dir/compiler_depend.internal".
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Dependencies file "demos/CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_segment.dir/compiler_depend.internal".
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make  -f demos/CMakeFiles/demo_dox_sequence_stringset.dir/build.make demos/CMakeFiles/demo_dox_sequence_stringset.dir/depend
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_stringset.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_store_store_example.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_stringset.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_store_store_example.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_dox_store_store_example
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make  -f demos/CMakeFiles/demo_dox_store_store_example.dir/build.make demos/CMakeFiles/demo_dox_store_store_example.dir/build
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 43%] Built target demo_dox_sequence_container_view_zip
[ 43%] Built target demo_dox_sequence_segment
[ 43%] Built target demo_dox_sequence_UNUSED_prefix
[ 44%] Built target demo_dox_store_store_example
make  -f demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build.make demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/depend
make  -f demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/build.make demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/depend
[ 44%] Built target demo_dox_sequence_UNUSED_infix
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/DependInfo.cmake "--color="
[ 44%] Built target demo_dox_sequence_string
[ 44%] Built target demo_dox_sequence_string2
[ 44%] Built target demo_dox_seq_io_fai_index_example
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_howto_custom_file_endings.dir/build.make demos/CMakeFiles/demo_howto_custom_file_endings.dir/depend
make  -f demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/build.make demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/depend
make  -f demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/build.make demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Built target demo_dox_sequence_UNUSED_suffix
make  -f demos/CMakeFiles/demo_howto_scores_init_score.dir/build.make demos/CMakeFiles/demo_howto_scores_init_score.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_custom_file_endings.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/DependInfo.cmake "--color="
[ 44%] Built target demo_dox_statistics_build_markov_model
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_howto_scores_load_score.dir/build.make demos/CMakeFiles/demo_howto_scores_load_score.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_scores_init_score.dir/DependInfo.cmake "--color="
[ 44%] Built target demo_dox_sequence_stringset
make  -f demos/CMakeFiles/demo_howto_using_zip_iterator.dir/build.make demos/CMakeFiles/demo_howto_using_zip_iterator.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_scores_load_score.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build.make demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_using_zip_iterator.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/DependInfo.cmake "--color="
[ 44%] Built target demo_dox_statistics_load_markov_model
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/depend
Dependencies file "demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_custom_file_endings.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_scores_load_score.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/depend
Dependencies file "demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_using_zip_iterator.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_howto_scores_init_score.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_howto_scores_load_score
Consolidate compiler generated dependencies of target demo_tabix_io_tabix_vcf
Consolidate compiler generated dependencies of target demo_dox_stream_lexical_cast
Consolidate compiler generated dependencies of target demo_howto_custom_file_endings
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build.make demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_howto_custom_file_endings.dir/build.make demos/CMakeFiles/demo_howto_custom_file_endings.dir/build
make  -f demos/CMakeFiles/demo_howto_scores_load_score.dir/build.make demos/CMakeFiles/demo_howto_scores_load_score.dir/build
make  -f demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build.make demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_howto_scores_load_score.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_howto_custom_file_endings.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 44%] Built target demo_dox_stream_lexical_cast
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/depend
[ 44%] Built target demo_howto_custom_file_endings
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/depend
[ 44%] Built target demo_tabix_io_tabix_vcf
[ 44%] Built target demo_howto_scores_load_score
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_tutorial_a_first_example_solution_4
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/build
Dependencies file "demos/CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_align.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 46%] Built target demo_tutorial_a_first_example_example_tags_for_print
Dependencies file "demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/build
[ 46%] Built target demo_tutorial_a_first_example_example_tempSubclassing
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_tutorial_a_first_example_solution_5
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make  -f demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_a_first_example_solution_4_templateSubclassing
Consolidate compiler generated dependencies of target demo_tutorial_a_first_example_solution_6
Consolidate compiler generated dependencies of target demo_tutorial_alignment_align
make  -f demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_graph.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/build
[ 46%] Built target demo_tutorial_a_first_example_solution_3
make  -f demos/CMakeFiles/demo_tutorial_alignment_align.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align.dir/build
[ 46%] Built target demo_tutorial_a_first_example_final_result
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/DependInfo.cmake "--color="
[ 46%] Built target demo_tutorial_a_first_example_solution_2
[ 47%] Built target demo_tutorial_a_first_example_solution_1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_alignment_align_assignment1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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[ 47%] Built target demo_tutorial_a_first_example_solution_4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_graph.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/compiler_depend.internal".
[ 47%] Built target demo_tutorial_a_first_example_solution_5
make  -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/DependInfo.cmake "--color="
[ 47%] Built target demo_tutorial_a_first_example_solution_4_templateSubclassing
Consolidate compiler generated dependencies of target demo_tutorial_alignment_graph_assignment1
Consolidate compiler generated dependencies of target demo_tutorial_alignment_graph
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/depend
[ 47%] Built target demo_tutorial_a_first_example_solution_6
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build
Consolidate compiler generated dependencies of target demo_tutorial_alignment_scoring_scheme_simple
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/compiler_depend.internal".
[ 48%] Built target demo_tutorial_alignment_align
make  -f demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build
[ 48%] Built target demo_tutorial_alignment_align_assignment1
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_alignment_scoring_scheme_matrix
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build
make  -f demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build.make demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/build.make demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_alphabets_assignment_1_solution
Consolidate compiler generated dependencies of target demo_tutorial_alignment_scoring_scheme_affine_dgs
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 48%] Built target demo_tutorial_alignment_graph
Dependencies file "demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/compiler_depend.internal".
[ 48%] Built target demo_tutorial_alignment_graph_assignment1
make  -f demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build.make demos/CMakeFiles/demo_tutorial_basics_allocator.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_alphabets_assignment_1
Dependencies file "demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_basics_base.dir/build.make demos/CMakeFiles/demo_tutorial_basics_base.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_alphabets_example_ordValue
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_allocator.dir/DependInfo.cmake "--color="
[ 49%] Built target demo_tutorial_alignment_scoring_scheme_simple
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_base.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_alphabets_example_bitsPerValue
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build
Consolidate compiler generated dependencies of target demo_tutorial_alphabets_example_size
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/build
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build
make  -f demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build
make  -f demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/build.make demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_base.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_allocator.dir/compiler_depend.internal".
[ 49%] Built target demo_tutorial_alignment_scoring_scheme_matrix
Consolidate compiler generated dependencies of target demo_tutorial_background_and_motivation_example
Consolidate compiler generated dependencies of target demo_tutorial_basic_techniques_base
[ 49%] Built target demo_tutorial_alphabets_assignment_1_solution
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build.make demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build
[ 49%] Built target demo_tutorial_alphabets_example_ordValue
make  -f demos/CMakeFiles/demo_tutorial_basics_strings.dir/build.make demos/CMakeFiles/demo_tutorial_basics_strings.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_strings.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_bed_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_base.dir/depend
[ 49%] Built target demo_tutorial_alphabets_example_bitsPerValue
make  -f demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/build.make demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_base.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_basics_allocator
Consolidate compiler generated dependencies of target demo_tutorial_basics_base
[ 49%] Built target demo_tutorial_alphabets_assignment_1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 49%] Built target demo_tutorial_alignment_scoring_scheme_affine_dgs
[ 49%] Built target demo_tutorial_alphabets_example_size
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build.make demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build
make  -f demos/CMakeFiles/demo_tutorial_basics_base.dir/build.make demos/CMakeFiles/demo_tutorial_basics_base.dir/build
make  -f demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_strings.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_basics_base.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_base.dir/compiler_depend.internal".
[ 50%] Built target demo_tutorial_background_and_motivation_example
Dependencies file "demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_basics_show_alphabets
make  -f demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/compiler_depend.internal".
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/compiler_depend.internal".
[ 50%] Built target demo_tutorial_basic_techniques_base
Dependencies file "demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/build.make demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/build
Consolidate compiler generated dependencies of target demo_tutorial_basics_strings
Dependencies file "demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_basics_strings.dir/build.make demos/CMakeFiles/demo_tutorial_basics_strings.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 50%] Built target demo_tutorial_basics_allocator
[ 50%] Built target demo_tutorial_basics_base
make  -f demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_bed_io_base
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_bed_io_solution3
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_bed_io_example1
Dependencies file "demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_bed_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_base.dir/build
[ 50%] Built target demo_tutorial_basics_show_alphabets
Dependencies file "demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/compiler_depend.internal".
[ 50%] Built target demo_tutorial_basics_strings
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_tutorial_bed_io_solution1
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Consolidate compiler generated dependencies of target demo_tutorial_consensus_alignment_with_positions
Dependencies file "demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_blast_io_read_assignment
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_bed_io_solution2
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_file_io_overview_example1
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_consensus_alignment_without_positions
[ 50%] Built target demo_tutorial_bed_io_solution3
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_blast_io_write_assignment
make  -f demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Built target demo_tutorial_bed_io_base
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_file_io_overview_solution1
make  -f demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build'.
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 51%] Built target demo_tutorial_bed_io_solution1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/DependInfo.cmake "--color="
[ 51%] Built target demo_tutorial_bed_io_example1
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/depend
[ 51%] Built target demo_tutorial_consensus_alignment_without_positions
[ 51%] Built target demo_tutorial_blast_io_write_assignment
[ 51%] Built target demo_tutorial_file_io_overview_solution1
[ 51%] Built target demo_tutorial_bed_io_solution2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/compiler_depend.internal".
[ 52%] Built target demo_tutorial_file_io_overview_example1
[ 52%] Built target demo_tutorial_consensus_alignment_with_positions
Consolidate compiler generated dependencies of target demo_tutorial_file_io_overview_solution2
[ 52%] Built target demo_tutorial_blast_io_read_assignment
make  -f demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/build.make demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/depend
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/compiler_depend.internal".
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/compiler_depend.internal".
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Dependencies file "demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_file_io_overview_solution3
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Consolidate compiler generated dependencies of target demo_tutorial_fragment_store_access_aligned_reads
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Dependencies file "demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/compiler_depend.internal".
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Consolidate compiler generated dependencies of target demo_tutorial_generic_programming_template_subclassing
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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[ 52%] Built target demo_tutorial_file_io_overview_solution3
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[ 53%] Built target demo_tutorial_fragment_store_access_aligned_reads
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[ 53%] Built target demo_tutorial_generic_programming_example_hashing
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Built target demo_tutorial_genome_annotations_assignment_1_hint
Dependencies file "demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/depend
[ 54%] Built target demo_tutorial_fragment_store_access_aligned_reads2
Dependencies file "demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/DependInfo.cmake "--color="
[ 54%] Built target demo_tutorial_fragment_store_base
Dependencies file "demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/depend
[ 54%] Built target demo_tutorial_genome_annotations_assignment_1_solution
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/depend
[ 54%] Built target demo_tutorial_genome_annotations_assignment_2_solution
[ 54%] Built target demo_tutorial_genome_annotations_assignment_3_solution
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/depend
[ 54%] Built target demo_tutorial_fragment_store_display_aligned_reads
make  -f demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_genome_annotations_assignment_4_solution
Consolidate compiler generated dependencies of target demo_tutorial_gff_and_gtf_io_base
Consolidate compiler generated dependencies of target demo_tutorial_genome_annotations_base
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_gff_and_gtf_io_example1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_gff_and_gtf_io_example2
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/build
Dependencies file "demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/build
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Dependencies file "demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/build'.
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_tutorial_gff_and_gtf_io_solution2
Consolidate compiler generated dependencies of target demo_tutorial_gff_and_gtf_io_solution3
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/build'.
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Consolidate compiler generated dependencies of target demo_tutorial_graph_graph_dijkstra
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/build'.
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build'.
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 54%] Built target demo_tutorial_gff_and_gtf_io_example1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/build'.
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[ 54%] Built target demo_tutorial_genome_annotations_assignment_4_solution
[ 54%] Built target demo_tutorial_genome_annotations_base
[ 55%] Built target demo_tutorial_gff_and_gtf_io_base
[ 55%] Built target demo_tutorial_gff_and_gtf_io_solution2
[ 55%] Built target demo_tutorial_gff_and_gtf_io_example2
[ 55%] Built target demo_tutorial_graph_solution_1
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/depend
[ 55%] Built target demo_tutorial_gff_and_gtf_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/depend
[ 55%] Built target demo_tutorial_gff_and_gtf_io_solution3
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/depend
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/DependInfo.cmake "--color="
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[ 55%] Built target demo_tutorial_graph_graph_dijkstra
make  -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/depend
[ 56%] Built target demo_tutorial_graph_graph_algo_scc
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/DependInfo.cmake "--color="
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Dependencies file "demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/compiler_depend.internal".
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/DependInfo.cmake "--color="
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Dependencies file "demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/compiler_depend.internal".
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make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/build
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/build'.
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 58%] Built target demo_tutorial_index_iterators_iterator_solution2
[ 58%] Built target demo_tutorial_index_iterators_index_assignment2
[ 58%] Built target demo_tutorial_index_iterators_index_assignment1
[ 58%] Built target demo_tutorial_index_iterators_index_bidirectional_search
[ 59%] Built target demo_tutorial_index_iterators_index_preorder
[ 59%] Built target demo_tutorial_index_iterators_index_property_maps
[ 59%] Built target demo_tutorial_index_iterators_index_search
[ 59%] Built target demo_tutorial_index_iterators_index_search2
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/depend
[ 59%] Built target demo_tutorial_index_iterators_iterator_assignment2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/depend
[ 59%] Built target demo_tutorial_index_iterators_iterator_solution1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 59%] Built target demo_tutorial_index_iterators_iterator_solution3
make  -f demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_indices_base.dir/build.make demos/CMakeFiles/demo_tutorial_indices_base.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_base.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/build.make demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/build.make demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/DependInfo.cmake "--color="
[ 59%] Built target demo_tutorial_indexed_fasta_io_base
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/depend
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_base.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_indexed_fasta_io_solution2
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build
Dependencies file "demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_indexed_fasta_io_solution1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_indices_base
make  -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/compiler_depend.internal".
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_indices_base.dir/build.make demos/CMakeFiles/demo_tutorial_indices_base.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_indices_base.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/DependInfo.cmake "--color="
[ 59%] Built target demo_tutorial_indexed_fasta_io_solution2
[ 59%] Built target demo_tutorial_indexed_fasta_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_iterators_base.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_base.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_base.dir/DependInfo.cmake "--color="
[ 59%] Built target demo_tutorial_indices_base
make  -f demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_base.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_indices_fm_index
Consolidate compiler generated dependencies of target demo_tutorial_indices_find2_index_approx
Consolidate compiler generated dependencies of target demo_tutorial_iterators_assignment_1
Consolidate compiler generated dependencies of target demo_tutorial_indices_assignment_1
Consolidate compiler generated dependencies of target demo_tutorial_iterators_assignment_1_solution
Consolidate compiler generated dependencies of target demo_tutorial_iterators_assignment_3_workshop
Consolidate compiler generated dependencies of target demo_tutorial_iterators_assignment_2_solution
Consolidate compiler generated dependencies of target demo_tutorial_indices_assignment_2
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/build.make demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/build
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Dependencies file "demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/build
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[ 60%] Built target demo_tutorial_indices_assignment_2
[ 60%] Built target demo_tutorial_indices_fm_index
[ 60%] Built target demo_tutorial_indices_assignment_1
Consolidate compiler generated dependencies of target demo_tutorial_iterators_base
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[ 60%] Built target demo_tutorial_indices_find2_index_approx
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/build
[ 60%] Built target demo_tutorial_iterators_assignment_1
make  -f demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/build
make  -f demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/build
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[ 61%] Built target demo_tutorial_iterators_assignment_2_solution
[ 61%] Built target demo_tutorial_iterators_assignment_1_solution
[ 61%] Built target demo_tutorial_iterators_assignment_3_workshop
[ 61%] Built target demo_tutorial_iterators_assignment_3_workshop_solution
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/DependInfo.cmake "--color="
[ 61%] Built target demo_tutorial_iterators_base
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/depend
[ 61%] Built target demo_tutorial_iterators_assignment_4_workshop_solution
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/depend
[ 61%] Built target demo_tutorial_iterators_sequence_iterator_demo
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_journaled_set_solution_online_search_assignment3
Consolidate compiler generated dependencies of target demo_tutorial_journaled_set_example_online_search_assignment1_hint
Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/build
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make  -f demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/build
make  -f demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/build
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[ 61%] Built target demo_tutorial_journaled_set_example_online_search_assignment1_hint
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[ 62%] Built target demo_tutorial_journaled_set_example_join
make  -f demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/depend
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/DependInfo.cmake "--color="
[ 62%] Built target demo_tutorial_journaled_set_example_journal_string_basic
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/DependInfo.cmake "--color="
[ 63%] Built target demo_tutorial_journaled_set_solution_online_search_assignment3
make  -f demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_journaled_set_example_online_search
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/compiler_depend.internal".
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[ 63%] Built target demo_tutorial_journaled_set_solution_online_search_assignment4
[ 63%] Built target demo_tutorial_journaled_set_example_online_search
[ 63%] Built target demo_tutorial_journaled_set_solution_online_search_assignment1
[ 63%] Built target demo_tutorial_journaled_string_tree_journaled_string_tree_base
[ 63%] Built target demo_tutorial_journaled_set_solution_online_search_assignment2
make  -f demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/depend
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 63%] Built target demo_tutorial_metafunctions_assignment1_solution
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/DependInfo.cmake "--color="
[ 63%] Built target demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1
[ 63%] Built target demo_tutorial_metafunctions_base
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/build
make  -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/build
make  -f demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/compiler_depend.internal".
[ 64%] Built target demo_tutorial_modifiers_UNUSED_modcomplementdna
make  -f demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/DependInfo.cmake "--color="
[ 64%] Built target demo_tutorial_modifiers_assignment1
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/compiler_depend.internal".
[ 64%] Built target demo_tutorial_modifiers_modreverse
[ 64%] Built target demo_tutorial_modifiers_assignment1_solution
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_modifiers_modview
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/build
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/compiler_depend.internal".
[ 64%] Built target demo_tutorial_modifiers_modview
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap
Consolidate compiler generated dependencies of target demo_tutorial_pairwise_sequence_alignment_alignment_banded
Consolidate compiler generated dependencies of target demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2
Consolidate compiler generated dependencies of target demo_tutorial_modifiers_nested
Consolidate compiler generated dependencies of target demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_pairwise_sequence_alignment_alignment_global_standard
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_multiple_sequence_alignment_assignment1
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/build
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/build'.
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 64%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2
Consolidate compiler generated dependencies of target demo_tutorial_pairwise_sequence_alignment_alignment_local
[ 65%] Built target demo_tutorial_multiple_sequence_alignment_assignment1
[ 65%] Built target demo_tutorial_modifiers_nested
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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[ 65%] Built target demo_tutorial_multiple_sequence_alignment_consensus
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[ 65%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3
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[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/DependInfo.cmake "--color="
[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/depend
[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_standard
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/depend
[ 66%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_local
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_parsing_command_line_arguments_assignment3_solution
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Consolidate compiler generated dependencies of target demo_tutorial_pairwise_sequence_alignment_assignment5_step5
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Consolidate compiler generated dependencies of target demo_tutorial_pairwise_sequence_alignment_assignment5
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_pairwise_sequence_alignment_assignment5_step1
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/compiler_depend.internal".
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Dependencies file "demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_parsing_command_line_arguments_example1_detailed
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make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/build
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Dependencies file "demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/compiler_depend.internal".
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Dependencies file "demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/compiler_depend.internal".
[ 68%] Built target demo_tutorial_parsing_command_line_arguments_assignment6_solution
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/depend
[ 68%] Built target demo_tutorial_parsing_command_line_arguments_base
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/DependInfo.cmake "--color="
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example1
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/depend
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example1_detailed
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_parsing_command_line_arguments_example_with_struct
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Consolidate compiler generated dependencies of target demo_tutorial_pattern_matching_assignment1
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/build
Dependencies file "demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/build
make  -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/DependInfo.cmake "--color="
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example_with_modifyString
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/DependInfo.cmake "--color="
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example_with_struct
[ 69%] Built target demo_tutorial_parsing_command_line_arguments_example_with_own_function
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/depend
[ 70%] Built target demo_tutorial_pattern_matching_assignment1
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/depend
[ 70%] Built target demo_tutorial_parsing_command_line_arguments_final_solution
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_pattern_matching_find_approx
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_pattern_matching_assignment3
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Dependencies file "demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/compiler_depend.internal".
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Dependencies file "demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/build
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Built target demo_tutorial_pattern_matching_find_approx
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/depend
[ 70%] Built target demo_tutorial_pattern_matching_assignment2_solution
[ 70%] Built target demo_tutorial_pattern_matching_assignment1_solution
Consolidate compiler generated dependencies of target demo_tutorial_pattern_matching_find_index
Consolidate compiler generated dependencies of target demo_tutorial_q_gram_index_index_assignment5
Consolidate compiler generated dependencies of target demo_tutorial_pattern_matching_find_index_multiple
Consolidate compiler generated dependencies of target demo_tutorial_q_gram_index_index_assignment6
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_q_gram_index_index_qgram
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build
[ 70%] Built target demo_tutorial_pattern_matching_assignment2
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 70%] Built target demo_tutorial_pattern_matching_assignment3_solution
[ 70%] Built target demo_tutorial_pattern_matching_assignment3
make  -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 72%] Built target demo_tutorial_pattern_matching_find_exact
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/compiler_depend.internal".
[ 72%] Built target demo_tutorial_pattern_matching_find_index
[ 72%] Built target demo_tutorial_q_gram_index_index_assignment5
make  -f demos/CMakeFiles/demo_tutorial_realignment_step1.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step1.dir/depend
[ 72%] Built target demo_tutorial_q_gram_index_index_assignment6
make  -f demos/CMakeFiles/demo_tutorial_realignment_step2.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_realignment_step1.dir/DependInfo.cmake "--color="
[ 72%] Built target demo_tutorial_pattern_matching_find_index_multiple
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_realignment_step2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/depend
[ 72%] Built target demo_tutorial_q_gram_index_index_qgram
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_realignment_step2.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_realignment_step1.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_q_gram_index_index_qgram_hash
Dependencies file "demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/compiler_depend.internal".
[ 73%] Built target demo_tutorial_q_gram_index_index_qgram_hash
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_sam_and_bam_io_example1
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_sam_and_bam_io_example2
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_tutorial_sam_and_bam_io_example7
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Consolidate compiler generated dependencies of target demo_tutorial_sam_and_bam_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_realignment_step1.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step1.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_tutorial_sam_and_bam_io_solution2
Dependencies file "demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_tutorial_realignment_step2
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/build
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/build
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 73%] Built target demo_tutorial_realignment_step1
[ 73%] Built target demo_tutorial_realignment_step2
[ 73%] Built target demo_tutorial_sam_and_bam_io_base
[ 73%] Built target demo_tutorial_sam_and_bam_io_example1
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/depend
[ 73%] Built target demo_tutorial_sam_and_bam_io_example2
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/DependInfo.cmake "--color="
[ 73%] Built target demo_tutorial_sam_and_bam_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/DependInfo.cmake "--color="
[ 74%] Built target demo_tutorial_seed_and_extend_example2
[ 74%] Built target demo_tutorial_sam_and_bam_io_example7
[ 74%] Built target demo_tutorial_sam_and_bam_io_solution2
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/depend
[ 74%] Built target demo_tutorial_sam_and_bam_io_solution3
[ 75%] Built target demo_tutorial_seed_and_extend_example3
Dependencies file "demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/DependInfo.cmake "--color="
[ 75%] Built target demo_tutorial_seed_and_extend_example1
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/depend
Dependencies file "demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_seeds_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seeds_example1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_seed_and_extend_example6
Consolidate compiler generated dependencies of target demo_tutorial_seed_and_extend_example4
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/build
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seeds_example1.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_seed_and_extend_example7
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make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/build
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make  -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/build
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/DependInfo.cmake "--color="
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/DependInfo.cmake "--color="
[ 75%] Built target demo_tutorial_seed_and_extend_solution6
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[ 76%] Built target demo_tutorial_seed_and_extend_solution3
Dependencies file "demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/compiler_depend.internal".
[ 76%] Built target demo_tutorial_seed_and_extend_solution1
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make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/depend
[ 76%] Built target demo_tutorial_seed_and_extend_solution5
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_sequence_io_example1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/compiler_depend.internal".
[ 76%] Built target demo_tutorial_seeds_solution1
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/build
[ 76%] Built target demo_tutorial_seed_and_extend_solution4
Dependencies file "demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_sequence_io_solution3
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Dependencies file "demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/DependInfo.cmake "--color="
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[ 77%] Built target demo_tutorial_sequence_io_base
Dependencies file "demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/build
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/depend
Consolidate compiler generated dependencies of target demo_tutorial_sequence_io_solution4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_sequence_io_solution2
[ 77%] Built target demo_tutorial_sequence_io_example1
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build
Consolidate compiler generated dependencies of target demo_tutorial_sequences_assignment_1_solution
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build
[ 77%] Built target demo_tutorial_sequence_io_solution3
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_sequences_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_base.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/DependInfo.cmake "--color="
[ 77%] Built target demo_tutorial_sequence_io_solution1
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_base.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 77%] Built target demo_tutorial_sequence_io_solution4
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/depend
[ 77%] Built target demo_tutorial_sequence_io_solution2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/compiler_depend.internal".
[ 78%] Built target demo_tutorial_sequences_assignment_1_solution
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_base.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_sequences_assignment_3
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build
Consolidate compiler generated dependencies of target demo_tutorial_sequences_assignment_3_solution
Consolidate compiler generated dependencies of target demo_tutorial_sequences_assignment_5_solution
Consolidate compiler generated dependencies of target demo_tutorial_sequences_assignment_2_solution
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build
Consolidate compiler generated dependencies of target demo_tutorial_sequences_base
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build
make  -f demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/build
Consolidate compiler generated dependencies of target demo_tutorial_sequences_assignment_6_solution
Consolidate compiler generated dependencies of target demo_tutorial_sequences_assignment_4_solution
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build'.
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_sequences_example_conversions_copy
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_sequences_example_comparisons
Consolidate compiler generated dependencies of target demo_tutorial_sequences_example_functionality1
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/build
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/build
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/DependInfo.cmake "--color="
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Built target demo_tutorial_sequences_assignment_5_solution
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[ 78%] Built target demo_tutorial_sequences_assignment_2_solution
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 78%] Built target demo_tutorial_sequences_assignment_3
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/compiler_depend.internal".
[ 78%] Built target demo_tutorial_sequences_assignment_4_solution
[ 78%] Built target demo_tutorial_sequences_base
[ 79%] Built target demo_tutorial_sequences_assignment_6_solution
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/depend
[ 79%] Built target demo_tutorial_sequences_example_comparisons
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_sequences_example_functionality2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 79%] Built target demo_tutorial_sequences_example_conversions_copy
[ 79%] Built target demo_tutorial_sequences_example_conversions_move
[ 79%] Built target demo_tutorial_sequences_example_functionality1
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_sequences_example_segments
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_sequences_in_depth_assignment_exact_generous_solution
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_sequences_in_depth_base
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_sequences_in_depth_example_overflow
[ 79%] Built target demo_tutorial_sequences_example_segments
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build'.
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[ 80%] Built target demo_tutorial_sequences_example_functionality2
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_base
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_genequant_assignment3
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_genequant_assignment1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_genequant_assignment5
[ 80%] Built target demo_tutorial_sequences_in_depth_assignment_exact_generous_solution
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_genequant_assignment4
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_genequant_assignment2
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build
[ 80%] Built target demo_tutorial_sequences_in_depth_base
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_sequences_in_depth_example_overflow
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_genequant_solution1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_genequant_solution2
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_genequant_solution4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_simple_rna_seq_genequant_solution3
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_simple_rna_seq_base
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build
[ 80%] Built target demo_tutorial_simple_rna_seq_genequant_assignment3
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 80%] Built target demo_tutorial_simple_rna_seq_genequant_assignment1
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/depend
[ 80%] Built target demo_tutorial_simple_rna_seq_genequant_assignment4
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/DependInfo.cmake "--color="
[ 80%] Built target demo_tutorial_simple_rna_seq_genequant_assignment5
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/depend
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_assignment2
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_solution1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/depend
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_solution4
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/DependInfo.cmake "--color="
[ 81%] Built target demo_tutorial_simple_rna_seq_genequant_solution2
make  -f demos/CMakeFiles/demo_tutorial_string_sets_base.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_base.dir/depend
[ 82%] Built target demo_tutorial_simple_rna_seq_genequant_solution3
Dependencies file "demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_base.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/depend
make  -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/compiler_depend.internal".
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Dependencies file "demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/compiler_depend.internal".
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[ 82%] Built target demo_tutorial_simple_rna_seq_interval_tree
[ 82%] Built target demo_tutorial_string_sets_assignment_4_workshop_solution
[ 82%] Built target demo_tutorial_string_sets_assignment_3_workshop_solution
[ 82%] Built target demo_tutorial_simple_rna_seq_genequant_solution5
[ 83%] Built target demo_tutorial_string_sets_assignment_1_solution
[ 83%] Built target demo_tutorial_string_sets_assignment_2_solution
[ 83%] Built target demo_tutorial_string_sets_base
[ 83%] Built target demo_tutorial_string_sets_assignment_2
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/depend
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make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/DependInfo.cmake "--color="
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/DependInfo.cmake "--color="
[ 84%] Built target demo_tutorial_string_sets_example_iterators
make  -f demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build.make demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/depend
[ 84%] Built target demo_tutorial_string_sets_example_functionality
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/compiler_depend.internal".
[ 84%] Built target demo_tutorial_string_sets_example_functionality_2
Dependencies file "demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/depend
[ 84%] Built target demo_tutorial_vcf_io_base
Dependencies file "demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_vcf_io_solution1
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/depend
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_tutorial_vcf_io_example1
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_tutorial_vcf_io_solution2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/build
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/build
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/build'.
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_alphabet
Consolidate compiler generated dependencies of target demo_tutorial_vcf_io_solution3
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_tutorial_workflows_knime_node
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_arg_align
[ 84%] Built target demo_tutorial_vcf_io_solution1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build.make demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_annotation_converter
[ 84%] Built target demo_tutorial_vcf_io_solution2
[ 84%] Built target demo_tutorial_vcf_io_example1
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_bam_library_size
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_bam_print_alignments
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 84%] Built target demo_tutorial_vcf_io_solution3
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/depend
make  -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/depend
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/depend
[ 84%] Built target demo_unassigned_or_unused_arg_align
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/compiler_depend.internal".
[ 84%] Built target demo_unassigned_or_unused_annotation_converter
[ 84%] Built target demo_unassigned_or_unused_bam_library_size
[ 84%] Built target demo_unassigned_or_unused_bam_print_alignments
[ 84%] Built target demo_tutorial_workflows_knime_node
[ 86%] Built target demo_unassigned_or_unused_alphabet
make  -f demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/depend
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/depend
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_bamutil
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/depend
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_file_speed
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_benchmark_stream
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_benchmark_stream_write
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_filter_sam
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_file_readwrite
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_file_format
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_graph_hmm_silent
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_find_wild
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_gff2gtf
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_index_find
make  -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build
[ 86%] Built target demo_unassigned_or_unused_bamutil
make  -f demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_index_find_stringset
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Built target demo_unassigned_or_unused_file_speed
[ 86%] Built target demo_unassigned_or_unused_benchmark_stream_write
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build
[ 86%] Built target demo_unassigned_or_unused_file_readwrite
[ 86%] Built target demo_unassigned_or_unused_file_format
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 86%] Built target demo_unassigned_or_unused_gff2gtf
[ 86%] Built target demo_unassigned_or_unused_graph_hmm_silent
[ 87%] Built target demo_unassigned_or_unused_find_wild
[ 88%] Built target demo_unassigned_or_unused_benchmark_stream
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/depend
[ 88%] Built target demo_unassigned_or_unused_filter_sam
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/DependInfo.cmake "--color="
[ 88%] Built target demo_unassigned_or_unused_index_find
[ 88%] Built target demo_unassigned_or_unused_index_find_stringset
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/depend
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/depend
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/depend
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_index_lcp
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/depend
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/depend
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_index_mums
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_index_node_predicate
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/compiler_depend.internal".
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_index_supermaxrepeats
make  -f demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_iterator
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_minimapper
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_modifier_modreverse
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_index_sufarray
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_index_qgram_counts
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_modifier_modview
[ 89%] Built target demo_unassigned_or_unused_index_mums
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build
[ 89%] Built target demo_unassigned_or_unused_index_lcp
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_parse_lm_stellar
[ 89%] Built target demo_unassigned_or_unused_index_node_predicate
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/depend
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_modifier_nested
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 89%] Built target demo_unassigned_or_unused_index_supermaxrepeats
make  -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/DependInfo.cmake "--color="
[ 89%] Built target demo_unassigned_or_unused_modifier_modview
[ 89%] Built target demo_unassigned_or_unused_index_sufarray
[ 89%] Built target demo_unassigned_or_unused_index_qgram_counts
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/depend
make  -f demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/depend
make  -f demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/DependInfo.cmake "--color="
[ 90%] Built target demo_unassigned_or_unused_modifier_modreverse
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/compiler_depend.internal".
[ 90%] Built target demo_unassigned_or_unused_parse_lm_stellar
[ 90%] Built target demo_unassigned_or_unused_iterator
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/depend
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_rooted_iterator
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/depend
[ 90%] Built target demo_unassigned_or_unused_minimapper
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_sam2svg
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build
[ 90%] Built target demo_unassigned_or_unused_modifier_nested
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_sample_seqs
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_segmentalignment
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_sequence_length
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_seeds
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_soft_to_hard_masking
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 90%] Built target demo_unassigned_or_unused_rooted_iterator
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/depend
[ 90%] Built target demo_unassigned_or_unused_sam2svg
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/DependInfo.cmake "--color="
[ 90%] Built target demo_unassigned_or_unused_seeds
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/DependInfo.cmake "--color="
[ 91%] Built target demo_unassigned_or_unused_sample_seqs
[ 91%] Built target demo_unassigned_or_unused_segmentalignment
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/DependInfo.cmake "--color="
[ 91%] Built target demo_unassigned_or_unused_soft_to_hard_masking
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/DependInfo.cmake "--color="
[ 91%] Built target demo_unassigned_or_unused_sequence_length
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/depend
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/depend
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorial_file_io_example1
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorial_sequence_replace_as
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorial_sequence_count_characters
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/build
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorial_file_io_solution1
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/build
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/build
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Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/depend
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[ 91%] Built target demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/DependInfo.cmake "--color="
[ 91%] Built target demo_unassigned_or_unused_tutorial_file_io_solution1
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/DependInfo.cmake "--color="
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/DependInfo.cmake "--color="
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/DependInfo.cmake "--color="
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorial_file_io_mmap_string_example
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorial_sequence_count_generic_characters
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorials_custim_io_example1
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorials_custim_io_parse_blastn
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/build
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/build
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make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/build
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/compiler_depend.internal".
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/build
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/compiler_depend.internal".
Dependencies file "demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorials_custim_io_reader_demo
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorials_custim_io_solution2
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build
[ 92%] Built target demo_unassigned_or_unused_tutorial_file_io_mmap_string_example
[ 92%] Built target demo_unassigned_or_unused_tutorial_sequence_count_generic_characters
[ 92%] Built target demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/build
[ 92%] Built target demo_unassigned_or_unused_tutorials_custim_io_parse_blastn
[ 92%] Built target demo_unassigned_or_unused_tutorials_custim_io_example1
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorials_custim_io_solution4
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorials_custim_io_solution1
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorials_custim_io_parse_gff2
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target demo_unassigned_or_unused_tutorials_custim_io_solution3
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/build
make  -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build
make  -f apps/alf/CMakeFiles/alf.dir/build.make apps/alf/CMakeFiles/alf.dir/depend
make  -f apps/bs_tools/CMakeFiles/bisar.dir/build.make apps/bs_tools/CMakeFiles/bisar.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/alf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/alf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/alf/CMakeFiles/alf.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools/CMakeFiles/bisar.dir/DependInfo.cmake "--color="
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make  -f apps/dfi/CMakeFiles/dfi.dir/build.make apps/dfi/CMakeFiles/dfi.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools/CMakeFiles/four2three.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 93%] Built target demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings
[ 93%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution2
[ 93%] Built target demo_unassigned_or_unused_tutorials_custim_io_reader_demo
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/dfi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/dfi/CMakeFiles/dfi.dir/DependInfo.cmake "--color="
Dependencies file "apps/bs_tools/CMakeFiles/casbar.dir/casbar.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools/CMakeFiles/casbar.dir/compiler_depend.internal".
Dependencies file "apps/alf/CMakeFiles/alf.dir/alf.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/alf/CMakeFiles/alf.dir/compiler_depend.internal".
Dependencies file "apps/bs_tools/CMakeFiles/four2three.dir/four2three.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools/CMakeFiles/four2three.dir/compiler_depend.internal".
Dependencies file "apps/bs_tools/CMakeFiles/bisar.dir/bisar.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools/CMakeFiles/bisar.dir/compiler_depend.internal".
[ 93%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution4
[ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution1
Consolidate compiler generated dependencies of target casbar
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target four2three
Dependencies file "apps/dfi/CMakeFiles/dfi.dir/dfi.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/dfi/CMakeFiles/dfi.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target alf
Consolidate compiler generated dependencies of target bisar
make  -f apps/fiona/CMakeFiles/compute_gain.dir/build.make apps/fiona/CMakeFiles/compute_gain.dir/depend
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona/CMakeFiles/compute_gain.dir/DependInfo.cmake "--color="
[ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_parse_gff2
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make  -f apps/bs_tools/CMakeFiles/bisar.dir/build.make apps/bs_tools/CMakeFiles/bisar.dir/build
make  -f apps/alf/CMakeFiles/alf.dir/build.make apps/alf/CMakeFiles/alf.dir/build
make  -f apps/bs_tools/CMakeFiles/four2three.dir/build.make apps/bs_tools/CMakeFiles/four2three.dir/build
make  -f apps/fiona/CMakeFiles/fiona.dir/build.make apps/fiona/CMakeFiles/fiona.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/fiona/CMakeFiles/fiona_illumina.dir/build.make apps/fiona/CMakeFiles/fiona_illumina.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution3
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona/CMakeFiles/fiona.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona/CMakeFiles/fiona_illumina.dir/DependInfo.cmake "--color="
make  -f apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build.make apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/depend
make  -f apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build.make apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/depend
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fx_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf/CMakeFiles/gustaf.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'apps/bs_tools/CMakeFiles/bisar.dir/build'.
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make[3]: Nothing to be done for 'apps/alf/CMakeFiles/alf.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target dfi
[ 94%] Built target casbar
Dependencies file "apps/fiona/CMakeFiles/compute_gain.dir/compute_gain.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona/CMakeFiles/compute_gain.dir/compiler_depend.internal".
Dependencies file "apps/fiona/CMakeFiles/fiona_illumina.dir/fiona.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona/CMakeFiles/fiona_illumina.dir/compiler_depend.internal".
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/compiler_depend.internal".
Dependencies file "apps/fiona/CMakeFiles/fiona.dir/fiona.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona/CMakeFiles/fiona.dir/compiler_depend.internal".
Dependencies file "apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/compiler_depend.internal".
make  -f apps/dfi/CMakeFiles/dfi.dir/build.make apps/dfi/CMakeFiles/dfi.dir/build
Consolidate compiler generated dependencies of target compute_gain
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "apps/gustaf/CMakeFiles/gustaf.dir/gustaf.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf/CMakeFiles/gustaf.dir/compiler_depend.internal".
[ 94%] Built target alf
make  -f apps/fiona/CMakeFiles/compute_gain.dir/build.make apps/fiona/CMakeFiles/compute_gain.dir/build
Consolidate compiler generated dependencies of target fx_bam_coverage
make  -f apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build.make apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/depend
[ 94%] Built target bisar
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/DependInfo.cmake "--color="
make  -f apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build.make apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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Consolidate compiler generated dependencies of target fx_fastq_stats
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[ 95%] Built target four2three
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build.make apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build
Dependencies file "apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/compiler_depend.internal".
make  -f apps/gustaf/CMakeFiles/gustaf.dir/build.make apps/gustaf/CMakeFiles/gustaf.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build'.
Consolidate compiler generated dependencies of target fiona_illumina
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target gustaf_mate_joining
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target dfi
make  -f apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build.make apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/fiona/CMakeFiles/fiona_illumina.dir/build.make apps/fiona/CMakeFiles/fiona_illumina.dir/build
Consolidate compiler generated dependencies of target fiona
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/gustaf/CMakeFiles/gustaf.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/fiona/CMakeFiles/fiona.dir/build.make apps/fiona/CMakeFiles/fiona.dir/build
make  -f apps/insegt/CMakeFiles/insegt.dir/build.make apps/insegt/CMakeFiles/insegt.dir/depend
make  -f apps/mason2/CMakeFiles/mason_genome.dir/build.make apps/mason2/CMakeFiles/mason_genome.dir/depend
[ 95%] Built target compute_gain
make  -f apps/mason2/CMakeFiles/mason_methylation.dir/build.make apps/mason2/CMakeFiles/mason_methylation.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/insegt /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/insegt/CMakeFiles/insegt.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_genome.dir/DependInfo.cmake "--color="
make  -f apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build.make apps/mason2/CMakeFiles/mason_frag_sequencing.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_methylation.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_frag_sequencing.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/fiona/CMakeFiles/fiona_illumina.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target fx_bam_coverage
[ 95%] Built target fx_fastq_stats
make  -f apps/mason2/CMakeFiles/mason_variator.dir/build.make apps/mason2/CMakeFiles/mason_variator.dir/depend
[ 95%] Built target gustaf
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/fiona/CMakeFiles/fiona.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target gustaf_mate_joining
Dependencies file "apps/mason2/CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_frag_sequencing.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_variator.dir/DependInfo.cmake "--color="
Dependencies file "apps/insegt/CMakeFiles/insegt.dir/insegt.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/insegt/CMakeFiles/insegt.dir/compiler_depend.internal".
Dependencies file "apps/mason2/CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_methylation.dir/compiler_depend.internal".
Dependencies file "apps/mason2/CMakeFiles/mason_genome.dir/mason_genome.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_genome.dir/compiler_depend.internal".
make  -f apps/mason2/CMakeFiles/mason_materializer.dir/build.make apps/mason2/CMakeFiles/mason_materializer.dir/depend
make  -f apps/mason2/CMakeFiles/mason_simulator.dir/build.make apps/mason2/CMakeFiles/mason_simulator.dir/depend
make  -f apps/mason2/CMakeFiles/mason_splicing.dir/build.make apps/mason2/CMakeFiles/mason_splicing.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_materializer.dir/DependInfo.cmake "--color="
[ 95%] Built target fiona_illumina
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_simulator.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_splicing.dir/DependInfo.cmake "--color="
make  -f apps/mason2/CMakeFiles/mason_tests.dir/build.make apps/mason2/CMakeFiles/mason_tests.dir/depend
make  -f apps/micro_razers/CMakeFiles/micro_razers.dir/build.make apps/micro_razers/CMakeFiles/micro_razers.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_tests.dir/DependInfo.cmake "--color="
make  -f apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build.make apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/depend
Dependencies file "apps/mason2/CMakeFiles/mason_variator.dir/mason_variator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_variator.dir/compiler_depend.internal".
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers/CMakeFiles/micro_razers.dir/DependInfo.cmake "--color="
[ 95%] Built target fiona
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/DependInfo.cmake "--color="
make  -f apps/ngs_roi/CMakeFiles/bam2roi.dir/build.make apps/ngs_roi/CMakeFiles/bam2roi.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/bam2roi.dir/DependInfo.cmake "--color="
Dependencies file "apps/mason2/CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_materializer.dir/compiler_depend.internal".
Dependencies file "apps/mason2/CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_splicing.dir/compiler_depend.internal".
Dependencies file "apps/mason2/CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_simulator.dir/compiler_depend.internal".
Dependencies file "apps/mason2/CMakeFiles/mason_tests.dir/mason_tests.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/mason2/CMakeFiles/mason_tests.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target insegt
Consolidate compiler generated dependencies of target mason_methylation
Consolidate compiler generated dependencies of target mason_genome
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target mason_variator
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/insegt/CMakeFiles/insegt.dir/build.make apps/insegt/CMakeFiles/insegt.dir/build
Consolidate compiler generated dependencies of target mason_frag_sequencing
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Dependencies file "apps/ngs_roi/CMakeFiles/bam2roi.dir/bam2roi.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/bam2roi.dir/compiler_depend.internal".
Dependencies file "apps/micro_razers/CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers/CMakeFiles/micro_razers.dir/compiler_depend.internal".
Dependencies file "apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/compiler_depend.internal".
make  -f apps/mason2/CMakeFiles/mason_genome.dir/build.make apps/mason2/CMakeFiles/mason_genome.dir/build
Dependencies file "apps/micro_razers/CMakeFiles/micro_razers.dir/micro_razers.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers/CMakeFiles/micro_razers.dir/compiler_depend.internal".
Dependencies file "apps/ngs_roi/CMakeFiles/bam2roi.dir/roi_builder.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/bam2roi.dir/compiler_depend.internal".
make  -f apps/mason2/CMakeFiles/mason_methylation.dir/build.make apps/mason2/CMakeFiles/mason_methylation.dir/build
Consolidate compiler generated dependencies of target mason_materializer
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/insegt/CMakeFiles/insegt.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target mason_tests
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/mason2/CMakeFiles/mason_genome.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build.make apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build
Consolidate compiler generated dependencies of target mason_splicing
Consolidate compiler generated dependencies of target mason_simulator
make  -f apps/mason2/CMakeFiles/mason_variator.dir/build.make apps/mason2/CMakeFiles/mason_variator.dir/build
Consolidate compiler generated dependencies of target roi_plot_thumbnails
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/mason2/CMakeFiles/mason_methylation.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target micro_razers
make  -f apps/mason2/CMakeFiles/mason_materializer.dir/build.make apps/mason2/CMakeFiles/mason_materializer.dir/build
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target bam2roi
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_simulator.dir/build.make apps/mason2/CMakeFiles/mason_simulator.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/mason2/CMakeFiles/mason_variator.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/mason2/CMakeFiles/mason_splicing.dir/build.make apps/mason2/CMakeFiles/mason_splicing.dir/build
make  -f apps/mason2/CMakeFiles/mason_tests.dir/build.make apps/mason2/CMakeFiles/mason_tests.dir/build
make  -f apps/micro_razers/CMakeFiles/micro_razers.dir/build.make apps/micro_razers/CMakeFiles/micro_razers.dir/build
make  -f apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build.make apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build
make  -f apps/ngs_roi/CMakeFiles/bam2roi.dir/build.make apps/ngs_roi/CMakeFiles/bam2roi.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/mason2/CMakeFiles/mason_materializer.dir/build'.
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make[3]: Nothing to be done for 'apps/mason2/CMakeFiles/mason_tests.dir/build'.
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make[3]: Nothing to be done for 'apps/micro_razers/CMakeFiles/micro_razers.dir/build'.
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make[3]: Nothing to be done for 'apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/mason2/CMakeFiles/mason_simulator.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
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make[3]: Nothing to be done for 'apps/mason2/CMakeFiles/mason_splicing.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 95%] Built target mason_methylation
[ 95%] Built target insegt
[ 96%] Built target mason_frag_sequencing
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/ngs_roi/CMakeFiles/bam2roi.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[ 96%] Built target mason_tests
[ 97%] Built target mason_genome
[ 97%] Built target mason_variator
[ 97%] Built target mason_materializer
[ 97%] Built target mason_simulator
make  -f apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build.make apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/depend
make  -f apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/DependInfo.cmake "--color="
[ 97%] Built target micro_razers
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/DependInfo.cmake "--color="
[ 97%] Built target mason_splicing
[ 97%] Built target bam2roi
[ 97%] Built target roi_plot_thumbnails
Dependencies file "apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/compiler_depend.internal".
Dependencies file "apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/compiler_depend.internal".
Dependencies file "apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/compiler_depend.internal".
Dependencies file "apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/compiler_depend.internal".
Consolidate compiler generated dependencies of target pair_align_lib
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Consolidate compiler generated dependencies of target roi_feature_projection
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build.make apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build
[ 98%] Built target pair_align_lib
make  -f apps/pair_align/CMakeFiles/pair_align.dir/build.make apps/pair_align/CMakeFiles/pair_align.dir/depend
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/CMakeFiles/pair_align.dir/DependInfo.cmake "--color="
Dependencies file "apps/pair_align/CMakeFiles/pair_align.dir/pair_align.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align/CMakeFiles/pair_align.dir/compiler_depend.internal".
[100%] Built target roi_feature_projection
Consolidate compiler generated dependencies of target pair_align
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make  -f apps/pair_align/CMakeFiles/pair_align.dir/build.make apps/pair_align/CMakeFiles/pair_align.dir/build
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[3]: Nothing to be done for 'apps/pair_align/CMakeFiles/pair_align.dir/build'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[100%] Built target pair_align
make[2]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
   dh_auto_test
	cd obj-x86_64-linux-gnu && make -j12 test ARGS\+=--verbose ARGS\+=-j12
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Running tests...
/usr/bin/ctest --force-new-ctest-process --verbose -j12
UpdateCTestConfiguration  from :/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl
UpdateCTestConfiguration  from :/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl
Test project /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
        Start   1: test_test_align

1: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align
1: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
1: Test timeout computed to be: 10000000
test 2
        Start   2: test_test_align_simd_global_equal_length

2: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_global_equal_length
2: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
2: Test timeout computed to be: 10000000
test 3
        Start   3: test_test_align_simd_global_equal_length_sse4_host

3: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_global_equal_length_sse4
3: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
3: Test timeout computed to be: 10000000
test 4
        Start   4: test_test_align_simd_global_equal_length_avx2_host

4: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_global_equal_length_avx2
4: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
4: Test timeout computed to be: 10000000
test 5
        Start   5: test_test_align_simd_global_variable_length

5: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_global_variable_length
5: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
5: Test timeout computed to be: 10000000
test 6
        Start   6: test_test_align_simd_global_variable_length_sse4_host

6: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_global_variable_length_sse4
6: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
6: Test timeout computed to be: 10000000
test 7
        Start   7: test_test_align_simd_global_variable_length_avx2_host

7: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_global_variable_length_avx2
7: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
7: Test timeout computed to be: 10000000
test 8
        Start   8: test_test_align_simd_local_equal_length

8: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_local_equal_length
8: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
8: Test timeout computed to be: 10000000
test 9
        Start   9: test_test_align_simd_local_equal_length_sse4_host

9: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_local_equal_length_sse4
9: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
9: Test timeout computed to be: 10000000
test 10
        Start  10: test_test_align_simd_local_equal_length_avx2_host

10: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_local_equal_length_avx2
10: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
10: Test timeout computed to be: 10000000
test 11
        Start  11: test_test_align_simd_local_variable_length

11: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_local_variable_length
11: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
11: Test timeout computed to be: 10000000
test 12
        Start  12: test_test_align_simd_local_variable_length_sse4_host

12: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_local_variable_length_sse4
12: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
12: Test timeout computed to be: 10000000
6: TEST SUITE tests
6: SEQAN_ENABLE_DEBUG == 1
6: SEQAN_ENABLE_TESTING == 1
6: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
6: SEQAN_ASYNC_IO == 1
6: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: TEST SUITE tests
7: SEQAN_ENABLE_DEBUG == 1
7: SEQAN_ENABLE_TESTING == 1
7: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
7: SEQAN_ASYNC_IO == 1
7: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
9: TEST SUITE tests
9: SEQAN_ENABLE_DEBUG == 1
9: SEQAN_ENABLE_TESTING == 1
9: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
9: SEQAN_ASYNC_IO == 1
9: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
9: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
9: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
10: TEST SUITE tests
10: SEQAN_ENABLE_DEBUG == 1
10: SEQAN_ENABLE_TESTING == 1
10: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
10: SEQAN_ASYNC_IO == 1
10: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
10: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
10: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
10: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
12: TEST SUITE tests
12: SEQAN_ENABLE_DEBUG == 1
12: SEQAN_ENABLE_TESTING == 1
12: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
12: SEQAN_ASYNC_IO == 1
10: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
10: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
9: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
6: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
10: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
12: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
12: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
10: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
10: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
10: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
10: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
10: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
10: **************************************
10:  Total Tests: 12
10:  Skipped:     0
10:  Errors:      0
10: **************************************
7: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
9: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
9: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
  1/414 Test  #10: test_test_align_simd_local_equal_length_avx2_host .................................   Passed    0.01 sec
test 13
        Start  13: test_test_align_simd_local_variable_length_avx2_host

13: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_simd_local_variable_length_avx2
13: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align
13: Test timeout computed to be: 10000000
12: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
12: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
12: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
12: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
12: **************************************
12:  Total Tests: 6
12:  Skipped:     0
12:  Errors:      0
12: **************************************
7: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
6: **************************************
6:  Total Tests: 24
6:  Skipped:     0
6:  Errors:      0
6: **************************************
9: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
9: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
9: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
9: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
9: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
9: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
9: **************************************
9:  Total Tests: 12
9:  Skipped:     0
9:  Errors:      0
9: **************************************
13: TEST SUITE tests
13: SEQAN_ENABLE_DEBUG == 1
13: SEQAN_ENABLE_TESTING == 1
13: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
13: SEQAN_ASYNC_IO == 1
  2/414 Test  #12: test_test_align_simd_local_variable_length_sse4_host ..............................   Passed    0.01 sec
test 14
        Start  14: test_test_align_extend

14: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_extend
14: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_extend
14: Test timeout computed to be: 10000000
7: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
7: **************************************
7:  Total Tests: 24
7:  Skipped:     0
7:  Errors:      0
7: **************************************
  3/414 Test   #6: test_test_align_simd_global_variable_length_sse4_host .............................   Passed    0.03 sec
  4/414 Test   #9: test_test_align_simd_local_equal_length_sse4_host .................................   Passed    0.02 sec
test 15
        Start  15: test_align_parallel_data_structures

15: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_parallel_data_structures
15: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel
15: Test timeout computed to be: 10000000
test 16
        Start  16: test_test_align_parallel_interface

16: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_parallel_interface
16: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel
16: Test timeout computed to be: 10000000
  5/414 Test   #7: test_test_align_simd_global_variable_length_avx2_host .............................   Passed    0.04 sec
13: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
13: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
13: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
13: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
13: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
13: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
13: **************************************
13:  Total Tests: 6
13:  Skipped:     0
13:  Errors:      0
13: **************************************
15: TEST SUITE test_align_parallel_data_structures
15: SEQAN_ENABLE_DEBUG == 1
15: SEQAN_ENABLE_TESTING == 1
15: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
15: SEQAN_ASYNC_IO == 1
test 17
        Start  17: test_test_align_parallel_interface_sse4_host

17: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_parallel_interface_sse4
17: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel
17: Test timeout computed to be: 10000000
5: TEST SUITE tests
5: SEQAN_ENABLE_DEBUG == 1
5: SEQAN_ENABLE_TESTING == 1
5: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
5: SEQAN_ASYNC_IO == 1
  6/414 Test  #13: test_test_align_simd_local_variable_length_avx2_host ..............................   Passed    0.02 sec
test 18
        Start  18: test_test_align_parallel_interface_avx2_host

18: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_parallel_interface_avx2
18: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel
18: Test timeout computed to be: 10000000
8: TEST SUITE tests
8: SEQAN_ENABLE_DEBUG == 1
8: SEQAN_ENABLE_TESTING == 1
8: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
8: SEQAN_ASYNC_IO == 1
11: TEST SUITE tests
11: SEQAN_ENABLE_DEBUG == 1
11: SEQAN_ENABLE_TESTING == 1
11: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
11: SEQAN_ASYNC_IO == 1
1: TEST SUITE test_align
1: SEQAN_ENABLE_DEBUG == 1
1: SEQAN_ENABLE_TESTING == 1
1: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
1: SEQAN_ASYNC_IO == 1
1: test_align_gaps_array_gaps_metafunctions OK
15: test_align_parallel_wavefront_task_scheduler_construct OK
15: test_align_parallel_wavefront_task_scheduler_async OK
4: TEST SUITE tests
4: SEQAN_ENABLE_DEBUG == 1
4: SEQAN_ENABLE_TESTING == 1
4: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
4: SEQAN_ASYNC_IO == 1
15: test_align_parallel_wavefront_alignment_scheduler_construct OK
2: TEST SUITE tests
2: SEQAN_ENABLE_DEBUG == 1
2: SEQAN_ENABLE_TESTING == 1
2: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
2: SEQAN_ASYNC_IO == 1
15: test_align_parallel_wavefront_alignment_scheduler_async OK
15: test_align_parallel_wavefront_alignment_scheduler_async_with_exception OK
15: test_align_parallel_intermediate_dp_result_construct OK
15: test_align_parallel_intermediate_dp_result_update_max OK
15: test_align_parallel_intermediate_dp_result_clear OK
15: test_align_parallel_wavefront_alignment_thread_local_storage_construt OK
15: test_align_parallel_wavefront_alignment_thread_local_storage_cache OK
15: test_align_parallel_wavefront_alignment_thread_local_storage_intermediate OK
15: **************************************
15:  Total Tests: 11
15:  Skipped:     0
15:  Errors:      0
15: **************************************
  7/414 Test  #15: test_align_parallel_data_structures ...............................................   Passed    0.12 sec
test 19
        Start  19: test_test_align_parallel_algorithm

19: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_parallel_algorithm
19: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel
19: Test timeout computed to be: 10000000
19: TEST SUITE test_align_parallel_algorithm
19: SEQAN_ENABLE_DEBUG == 1
19: SEQAN_ENABLE_TESTING == 1
19: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
19: SEQAN_ASYNC_IO == 1
3: TEST SUITE tests
3: SEQAN_ENABLE_DEBUG == 1
3: SEQAN_ENABLE_TESTING == 1
3: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
3: SEQAN_ASYNC_IO == 1
19: test_align_parallel_wavefront_single_global_alignment OK
1: test_align_gaps_array_constructor_and_source OK
1: test_align_gaps_array_gaps_set_source OK
1: test_align_gaps_array_gaps_assign_source OK
17: TEST SUITE tests
17: SEQAN_ENABLE_DEBUG == 1
17: SEQAN_ENABLE_TESTING == 1
17: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
17: SEQAN_ASYNC_IO == 1
17: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Serial_> > > OK
14: TEST SUITE test_align_extend
14: SEQAN_ENABLE_DEBUG == 1
14: SEQAN_ENABLE_TESTING == 1
14: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
14: SEQAN_ASYNC_IO == 1
14: test_align_extend_simple OK
14: test_align_extend_simple_infixes_recomp OK
14: test_align_extend_banded OK
14: test_align_extend_xdrop OK
14: test_align_extend_xdrop_banded OK
14: test_align_extend_semiglobal OK
14: **************************************
14:  Total Tests: 6
14:  Skipped:     0
14:  Errors:      0
14: **************************************
18: TEST SUITE tests
18: SEQAN_ENABLE_DEBUG == 1
18: SEQAN_ENABLE_TESTING == 1
18: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
18: SEQAN_ASYNC_IO == 1
18: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Serial_> > > OK
16: TEST SUITE tests
16: SEQAN_ENABLE_DEBUG == 1
16: SEQAN_ENABLE_TESTING == 1
16: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
16: SEQAN_ASYNC_IO == 1
16: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Serial_> > > OK
  8/414 Test  #14: test_test_align_extend ............................................................   Passed    0.21 sec
test 20
        Start  20: test_test_align_parallel_algorithm_sse4_host

20: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_parallel_algorithm_sse4
20: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel
20: Test timeout computed to be: 10000000
17: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Serial_> > > OK
20: TEST SUITE test_align_parallel_algorithm
20: SEQAN_ENABLE_DEBUG == 1
20: SEQAN_ENABLE_TESTING == 1
20: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
20: SEQAN_ASYNC_IO == 1
5: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
20: test_align_parallel_wavefront_single_global_alignment OK
19: test_align_parallel_wavefront_multiple_global_alignment OK
19: **************************************
19:  Total Tests: 2
19:  Skipped:     0
19:  Errors:      0
19: **************************************
  9/414 Test  #19: test_test_align_parallel_algorithm ................................................   Passed    0.12 sec
test 21
        Start  21: test_test_align_parallel_algorithm_avx2_host

21: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_parallel_algorithm_avx2
21: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_parallel
21: Test timeout computed to be: 10000000
17: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Serial_> > > OK
18: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Serial_> > > OK
8: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
21: TEST SUITE test_align_parallel_algorithm
21: SEQAN_ENABLE_DEBUG == 1
21: SEQAN_ENABLE_TESTING == 1
21: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
21: SEQAN_ASYNC_IO == 1
16: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Serial_> > > OK
21: test_align_parallel_wavefront_single_global_alignment OK
11: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
11: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
11: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
17: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Serial_> > > OK
17: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Vectorial_> > > OK
16: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Serial_> > > OK
18: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Serial_> > > OK
17: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Vectorial_> > > OK
5: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
8: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
8: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
8: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
8: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
8: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
8: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
8: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
8: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
16: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Serial_> > > OK
16: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Serial_> > > OK
8: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
8: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
8: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
8: **************************************
8:  Total Tests: 12
8:  Skipped:     0
8:  Errors:      0
8: **************************************
 10/414 Test   #8: test_test_align_simd_local_equal_length ...........................................   Passed    0.34 sec
test 22
        Start  22: test_test_align_profile

22: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_profile
22: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_profile
22: Test timeout computed to be: 10000000
11: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
11: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
11: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
11: **************************************
11:  Total Tests: 6
11:  Skipped:     0
11:  Errors:      0
11: **************************************
18: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Serial_> > > OK
18: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Vectorial_> > > OK
22: TEST SUITE test_align_profile
22: SEQAN_ENABLE_DEBUG == 1
22: SEQAN_ENABLE_TESTING == 1
22: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
22: SEQAN_ASYNC_IO == 1
22: test_align_profile_profile_test OK
22: test_align_profile_align_profile_sequence OK
22: test_align_profile_align_profile_sequence_frac OK
22: test_align_profile_add_to_profile OK
22: test_align_profile_add_to_profile_multiple OK
22: test_align_profile_add_to_profile_banded OK
22: test_align_profile_add_to_profile_multiple_banded OK
22: **************************************
22:  Total Tests: 7
22:  Skipped:     0
22:  Errors:      0
22: **************************************
 11/414 Test  #11: test_test_align_simd_local_variable_length ........................................   Passed    0.34 sec
 12/414 Test  #22: test_test_align_profile ...........................................................   Passed    0.01 sec
test 23
        Start  23: test_test_align_split

23: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_align_split
23: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/align_split
23: Test timeout computed to be: 10000000
test 24
        Start  24: test_test_alignment_free

24: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_alignment_free
24: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/alignment_free
24: Test timeout computed to be: 10000000
18: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Vectorial_> > > OK
17: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Vectorial_> > > OK
16: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Serial_> > > OK
5: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
23: TEST SUITE test_align_split
23: SEQAN_ENABLE_DEBUG == 1
23: SEQAN_ENABLE_TESTING == 1
23: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
23: SEQAN_ASYNC_IO == 1
23: test_align_split_overlapping_reads_in_reference_align_unbanded OK
23: test_align_split_overlapping_contigs_in_reference_align_unbanded OK
23: test_align_split_insertion_in_reference_align_unbanded OK
23: test_align_split_overlapping_reads_in_reference_gaps_unbanded OK
23: test_align_split_overlapping_contigs_in_reference_gaps_unbanded OK
23: test_align_split_insertion_in_reference_gaps_unbanded OK
23: test_align_split_overlapping_reads_in_reference_align_banded OK
23: test_align_split_overlapping_contigs_in_reference_align_banded OK
23: test_align_split_insertion_in_reference_align_banded OK
23: test_align_split_overlapping_reads_in_reference_gaps_banded OK
23: test_align_split_overlapping_contigs_in_reference_gaps_banded OK
23: test_align_split_insertion_in_reference_gaps_banded OK
24: TEST SUITE test_alignment_free
24: SEQAN_ENABLE_DEBUG == 1
24: SEQAN_ENABLE_TESTING == 1
24: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
24: SEQAN_ASYNC_IO == 1
24: test_alignment_free_d2_dna OK
24: test_alignment_free_d2_dna5 OK
2: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
24: test_alignment_free_d2star_dna5 OK
24: test_alignment_free_d2z_dna5 OK
23: test_align_split_issue_1679 OK
23: **************************************
23:  Total Tests: 13
23:  Skipped:     0
23:  Errors:      0
23: **************************************
 13/414 Test  #23: test_test_align_split .............................................................   Passed    0.04 sec
test 25
        Start  25: test_test_arg_parse

25: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_arg_parse
25: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse
25: Test timeout computed to be: 10000000
25: TEST SUITE test_arg_parse
25: SEQAN_ENABLE_DEBUG == 1
25: SEQAN_ENABLE_TESTING == 1
25: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
25: SEQAN_ASYNC_IO == 1
25: test_unset_value OK
25: test_unset_values OK
25: test_int_short_argument OK
25: test_int_long_argument OK
25: test_non_int_argument OK
25: test_int64_short_argument OK
25: test_int64_long_argument OK
25: test_non_int64_argument OK
25: test_double_short_argument OK
25: test_double_long_argument OK
25: test_non_double_argument OK
25: test_double_scientific_notation OK
25: test_string_short_argument OK
25: test_string_long_argument OK
25: test_string_missing_argument OK
25: test_string_list OK
25: test_min_max_double_values_in_range OK
25: test_min_max_double_values_to_small OK
25: test_min_max_double_values_to_big OK
25: test_min_max_int_values_in_range OK
25: test_min_max_int_values_to_small OK
25: test_min_max_int_values_to_big OK
25: test_allowed_values_contained OK
25: test_allowed_values_not_contained OK
25: test_input_file_short OK
25: test_input_file_long OK
25: test_input_file_missing OK
25: test_input_file_invalid_type OK
25: test_input_file_valid_type OK
25: test_input_file_extension OK
25: test_input_file_auto_file_ext_option OK
25: test_output_file_short OK
25: test_output_file_long OK
25: test_output_file_missing OK
25: test_output_file_invalid_type OK
25: test_output_file_valid_type OK
25: test_output_file_extension OK
25: test_output_file_extension_targz OK
25: test_output_file_explicit_extension_valid OK
25: test_output_file_explicit_extension_invalid OK
25: test_argument_string OK
25: test_argument_not_all_set OK
25: test_argument_double OK
25: test_argument_not_a_double OK
25: test_argument_auto_file_ext_option OK
25: test_int_list_option OK
25: test_double_list_option OK
25: test_double_list_option_not_enough_arguments OK
25: test_boolean_argument_on OK
25: test_boolean_argument_off OK
25: test_boolean_flags OK
25: test_combined_boolean_flags OK
25: test_long_short_flag_name OK
25: test_argument_string_type OK
25: test_argument_int_type OK
25: test_argument_int64_type OK
25: test_argument_double_type OK
25: test_argument_inputfile_type OK
25: test_argument_outputfile_type OK
25: test_argument_inputprefix_type OK
25: test_argument_outputprefix_type OK
25: test_argument_label OK
25: test_argument_invalid_cast OK
25: test_argument_min_max_boundaries OK
25: test_argument_valid_values OK
25: test_argument_valid_values_directories OK
25: test_argument_parser OK
25: test_parse_non_const_cstring OK
25: test_default_value OK
25: test_isDouble OK
25: test_isInt OK
17: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Vectorial_> > > OK
17: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Serial_> > > OK
17: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Serial_> > > OK
16: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Serial_> > > OK
18: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Vectorial_> > > OK
20: test_align_parallel_wavefront_multiple_global_alignment OK
2: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
25: test_arg_parse_ctd_support OK
25: **************************************
25:  Total Tests: 72
25:  Skipped:     0
25:  Errors:      0
25: **************************************
 14/414 Test  #25: test_test_arg_parse ...............................................................   Passed    0.05 sec
test 26
        Start  26: test_test_arg_parse_version_check

26: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_arg_parse_version_check
26: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/arg_parse
26: Test timeout computed to be: 10000000
17: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Serial_> > > OK
16: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Serial_> > > OK
18: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Vectorial_> > > OK
16: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Serial_> > > OK
18: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Serial_> > > OK
16: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Serial_> > > OK
24: test_alignment_free_n2_dna5 OK
24: test_alignment_free_calculate_probability OK
24: test_alignment_free_calculate_variance OK
24: test_alignment_free_calculate_covariance OK
21: test_align_parallel_wavefront_multiple_global_alignment OK
18: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Serial_> > > OK
17: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Serial_> > > OK
17: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Vectorial_> > > OK
5: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
1: test_align_gaps_array_gaps_gap_operations_gaps_center OK
1: test_align_gaps_array_gaps_gap_operations_gaps_leading OK
1: test_align_gaps_array_gaps_gap_operations_gaps_trailing OK
1: test_align_gaps_array_gaps_sequence_interface_ungapped OK
1: test_align_gaps_array_gaps_sequence_interface_gaps_center OK
1: test_align_gaps_array_gaps_sequence_interface_gaps_leading OK
1: test_align_gaps_array_gaps_sequence_interface_gaps_trailing OK
1: test_align_gaps_array_gaps_iterator_interface_begin OK
1: test_align_gaps_array_gaps_iterator_interface_end OK
1: test_align_gaps_array_gaps_iterator_interface_iter OK
1: test_align_gaps_array_gaps_source_view_position_ungapped OK
1: test_align_gaps_array_gaps_source_view_position_gaps_center OK
1: test_align_gaps_array_gaps_source_view_position_gaps_leading OK
1: test_align_gaps_array_gaps_source_view_position_gaps_trailing OK
1: test_align_gaps_array_gaps_clipping_ungapped OK
1: test_align_gaps_array_gaps_clipping_gaps_center OK
1: test_align_gaps_array_gaps_clipping_gaps_leading OK
1: test_align_gaps_array_gaps_clipping_gaps_trailing OK
1: test_align_gaps_array_gaps_clear_clipping OK
1: test_align_gaps_array_gaps_copy_gaps OK
1: test_align_gaps_array_gaps_copy_clipping OK
1: test_align_gaps_array_gaps_source_is_nothing OK
5: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdVariableLength_>, seqan::Tag<seqan::BandOff_> > OK
5: **************************************
5:  Total Tests: 24
5:  Skipped:     0
5:  Errors:      0
5: **************************************
16: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Serial_> > > OK
17: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Vectorial_> > > OK
 15/414 Test   #5: test_test_align_simd_global_variable_length .......................................   Passed    0.51 sec
test 27
        Start  27: test_test_bam_io

27: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_bam_io
27: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bam_io
27: Test timeout computed to be: 10000000
27: TEST SUITE test_bam_io
27: SEQAN_ENABLE_DEBUG == 1
27: SEQAN_ENABLE_TESTING == 1
27: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
27: SEQAN_ASYNC_IO == 1
27: test_bam_io_bam_alignment_record_class OK
27: test_bam_io_bam_alignment_record_has_flag_multiple OK
27: test_bam_io_bam_alignment_record_has_flag_unmapped OK
27: test_bam_io_bam_alignment_record_has_flag_next_unmapped OK
27: test_bam_io_bam_alignment_record_has_flag_rc OK
27: test_bam_io_bam_alignment_record_has_flag_next_rc OK
27: test_bam_io_bam_alignment_record_has_flag_first OK
27: test_bam_io_bam_alignment_record_has_flag_last OK
27: test_bam_io_bam_alignment_record_has_flag_secondary OK
27: test_bam_io_bam_alignment_record_has_flag_qc_no_pass OK
27: test_bam_io_bam_alignment_record_has_flag_duplicate OK
27: test_bam_io_bam_alignment_record_has_flag_supplementary OK
27: test_bam_io_bam_header_class OK
27: test_bam_io_bam_header_typedefs OK
27: test_bam_io_bam_header_record_class OK
27: test_bam_io_bam_header_record_typedefs OK
27: test_bam_io_bam_header_record_find_tag_key OK
27: test_bam_io_bam_header_record_get_tag_value OK
27: test_bam_io_bam_io_context_standalone OK
27: test_bam_io_bam_io_context_fragment_store OK
27: test_assign_tags_bam_to_sam_two_tags OK
27: test_assign_tags_bam_to_sam_type_A OK
27: test_assign_tags_bam_to_sam_type_c OK
27: test_assign_tags_bam_to_sam_type_C OK
27: test_assign_tags_bam_to_sam_type_s OK
27: test_assign_tags_bam_to_sam_type_S OK
27: test_assign_tags_bam_to_sam_type_i OK
27: test_assign_tags_bam_to_sam_type_I OK
27: test_assign_tags_bam_to_sam_type_f OK
27: test_assign_tags_bam_to_sam_type_Z OK
27: test_assign_tags_bam_to_sam_type_H OK
27: test_assign_tags_bam_to_sam_type_Bc OK
27: test_assign_tags_bam_to_sam_type_BC OK
27: test_assign_tags_bam_to_sam_type_Bs OK
27: test_assign_tags_bam_to_sam_type_BS OK
27: test_assign_tags_bam_to_sam_type_Bi OK
27: test_assign_tags_bam_to_sam_type_BI OK
27: test_assign_tags_bam_to_sam_type_Bf OK
27: test_assign_tags_sam_to_bam_two_tags OK
27: test_assign_tags_sam_to_bam_type_A OK
27: test_assign_tags_sam_to_bam_type_i OK
27: test_assign_tags_sam_to_bam_type_f OK
27: test_assign_tags_sam_to_bam_type_Z OK
27: test_assign_tags_sam_to_bam_type_H OK
27: test_assign_tags_sam_to_bam_type_Bc OK
27: test_assign_tags_sam_to_bam_type_BC OK
27: test_assign_tags_sam_to_bam_type_Bs OK
27: test_assign_tags_sam_to_bam_type_BS OK
27: test_assign_tags_sam_to_bam_type_Bi OK
27: test_assign_tags_sam_to_bam_type_BI OK
27: test_assign_tags_sam_to_bam_type_Bf OK
27: test_bam_tags_dict_get_type_size OK
27: test_bam_tags_dict_get_type OK
27: test_bam_tags_dict_length OK
27: test_bam_tags_dict_extract_value_type_A OK
27: test_bam_tags_dict_extract_value_type_c OK
27: test_bam_tags_dict_extract_value_type_C OK
27: test_bam_tags_dict_extract_value_type_s OK
27: test_bam_tags_dict_extract_value_type_S OK
27: test_bam_tags_dict_extract_value_type_i OK
27: test_bam_tags_dict_extract_value_type_I OK
27: test_bam_tags_dict_get_value_type_A OK
27: test_bam_tags_dict_get_value_type_c OK
27: test_bam_tags_dict_get_value_type_C OK
27: test_bam_tags_dict_get_value_type_s OK
27: test_bam_tags_dict_get_value_type_S OK
27: test_bam_tags_dict_get_value_type_i OK
27: test_bam_tags_dict_get_value_type_I OK
27: test_bam_tags_dict_get_value_type_f OK
27: test_bam_tags_dict_get_value_type_Z OK
27: test_bam_tags_dict_get_value_type_H OK
27: test_bam_tags_dict_get_value_type_Bc OK
27: test_bam_tags_dict_get_value_type_BC OK
27: test_bam_tags_dict_get_value_type_Bs OK
27: test_bam_tags_dict_get_value_type_BS OK
27: test_bam_tags_dict_get_value_type_Bi OK
27: test_bam_tags_dict_get_value_type_BI OK
27: test_bam_tags_dict_get_value_type_Bf OK
27: test_bam_tags_dict_erase_tag OK
27: test_bam_tags_dict_set_tag_value OK
27: test_bam_tags_dict_append_tag_value OK
27: test_bam_tags_dict_const_bam_tags_sequence OK
27: test_bam_io_sam_read_header OK
27: test_bam_io_sam_read_alignment OK
27: test_bam_io_sam_write_header OK
27: test_bam_io_sam_write_alignment OK
2: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
18: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Serial_> > > OK
2: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
16: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Serial_> > > OK
16: **************************************
16:  Total Tests: 12
16:  Skipped:     0
16:  Errors:      0
16: **************************************
 16/414 Test  #16: test_test_align_parallel_interface ................................................   Passed    0.49 sec
test 28
        Start  28: test_test_basic_exception

28: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_exception
28: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
28: Test timeout computed to be: 10000000
28: TEST SUITE test_basic_exception
28: SEQAN_ENABLE_DEBUG == 1
28: SEQAN_ENABLE_TESTING == 1
28: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
28: SEQAN_ASYNC_IO == 1
28: test_basic_exception_try_catch OK
28: test_basic_exception_bad_alloc OK
28: test_basic_exception_runtime_error OK
28: **************************************
28:  Total Tests: 3
28:  Skipped:     0
28:  Errors:      0
28: **************************************
 17/414 Test  #28: test_test_basic_exception .........................................................   Passed    0.01 sec
test 29
        Start  29: test_test_basic_metaprogramming

29: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_metaprogramming
29: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
29: Test timeout computed to be: 10000000
18: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Serial_> > > OK
18: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Vectorial_> > > OK
17: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Vectorial_> > > OK
1: test_align_gaps_array_gaps_clear OK
1: test_align_gaps_anchor_gaps_metafunctions OK
1: test_align_gaps_anchor_constructor_and_source OK
1: test_align_gaps_anchor_gaps_set_source OK
1: test_align_gaps_anchor_gaps_assign_source OK
29: TEST SUITE test_basic_metaprogramming
29: SEQAN_ENABLE_DEBUG == 1
29: SEQAN_ENABLE_TESTING == 1
29: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
29: SEQAN_ASYNC_IO == 1
29: test_basic_metaprogramming_logic_bool_type OK
29: test_basic_metaprogramming_logic_eval OK
29: test_basic_metaprogramming_logic_or OK
29: test_basic_metaprogramming_logic_or_c OK
29: test_basic_metaprogramming_logic_and OK
29: test_basic_metaprogramming_logic_and_c OK
29: test_basic_metaprogramming_logic_if OK
29: test_basic_metaprogramming_logic_if_c OK
29: test_basic_metaprogramming_control_loop_reverse OK
29: test_basic_metaprogramming_control_loop OK
29: test_basic_metaprogramming_control_switch OK
29: test_basic_metaprogramming_control_if OK
29: test_basic_metaprogramming_math_log2 OK
29: test_basic_metaprogramming_math_log2_floor OK
29: test_basic_metaprogramming_math_log2_power OK
29: test_basic_metaprogramming_type_same_type OK
29: test_basic_metaprogramming_type_make_signed OK
29: test_basic_metaprogramming_type_make_unsigned OK
29: test_basic_metaprogramming_type_remove_reference OK
29: test_basic_metaprogramming_type_remove_const OK
29: test_basic_metaprogramming_type_is_const OK
29: test_basic_metaprogramming_type_class_identifier OK
29: test_basic_metaprogramming_enable_if_disable_if OK
29: test_basic_metaprogramming_enable_if2_disable_if2 OK
29: **************************************
29:  Total Tests: 24
29:  Skipped:     0
29:  Errors:      0
29: **************************************
27: test_bam_io_bam_read_header OK
27: test_bam_io_bam_read_alignment OK
 18/414 Test  #29: test_test_basic_metaprogramming ...................................................   Passed    0.01 sec
test 30
        Start  30: test_test_basic_fundamental

30: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_fundamental
30: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
30: Test timeout computed to be: 10000000
18: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Vectorial_> > > OK
30: TEST SUITE test_basic_metaprogramming
30: SEQAN_ENABLE_DEBUG == 1
30: SEQAN_ENABLE_TESTING == 1
30: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
30: SEQAN_ASYNC_IO == 1
30: test_basic_fundamental_tags_tag OK
30: test_basic_fundamental_tags_tags OK
30: test_basic_fundamental_tags_tag_list OK
30: test_basic_fundamental_tags_tag_selector OK
30: test_basic_fundamental_tags_length_tag_list OK
30: test_basic_fundamental_metafunctions_value OK
30: test_basic_fundamental_metafunctions_get_value OK
30: test_basic_fundamental_metafunctions_reference OK
30: test_basic_fundamental_metafunctions_size OK
30: test_basic_fundamental_metafunctions_difference OK
30: test_basic_fundamental_metafunctions_position OK
30: test_basic_fundamental_metafunctions_spec OK
30: test_basic_fundamental_metafunctions_deepest_spec OK
30: test_basic_fundamental_transport_assign OK
30: test_basic_fundamental_transport_move OK
30: test_basic_fundamental_transport_set OK
30: test_basic_fundamental_comparison_compare_type OK
30: test_basic_fundamental_convert_metafunction OK
30: test_basic_fundamental_convert_function OK
30: test_basic_array_construct_destruct_metafunction_is_simple OK
30: test_basic_array_construct_destruct_construct_value_pointer OK
30: test_basic_array_construct_destruct_destruct_value_pointer OK
30: test_basic_array_construct_destruct_array_construct_pointer OK
30: test_basic_array_construct_destruct_array_construct_copy_pointer OK
30: test_basic_array_construct_destruct_array_construct_move_pointer OK
30: test_basic_array_construct_destruct_array_destruct_pointer OK
30: test_basic_array_construct_destruct_array_fill_pointer OK
30: test_basic_array_construct_destruct_array_copy_forward_pointer OK
30: test_basic_array_construct_destruct_array_copy_backward_pointer OK
30: test_basic_array_construct_destruct_array_copy_pointer OK
30: test_basic_array_construct_destruct_array_move_forward_pointer OK
30: test_basic_array_construct_destruct_array_move_backward_pointer OK
30: test_basic_array_construct_destruct_array_move_pointer OK
30: test_basic_array_construct_destruct_array_clear_space_pointer OK
30: **************************************
30:  Total Tests: 34
30:  Skipped:     0
30:  Errors:      0
30: **************************************
 19/414 Test  #30: test_test_basic_fundamental .......................................................   Passed    0.01 sec
test 31
        Start  31: test_test_basic_concept

31: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_concept
31: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
31: Test timeout computed to be: 10000000
31: TEST SUITE test_basic_concept
31: SEQAN_ENABLE_DEBUG == 1
31: SEQAN_ENABLE_TESTING == 1
31: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
31: SEQAN_ASYNC_IO == 1
31: test_basic_concepts_concept_impl OK
31: test_basic_concepts_concept_refine OK
31: test_basic_concepts_move_construtible_concept OK
31: **************************************
31:  Total Tests: 3
31:  Skipped:     0
31:  Errors:      0
31: **************************************
 20/414 Test  #31: test_test_basic_concept ...........................................................   Passed    0.00 sec
test 32
        Start  32: test_test_basic_alphabet

32: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_alphabet
32: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
32: Test timeout computed to be: 10000000
17: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Vectorial_> > > OK
17: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Serial_> > > OK
32: TEST SUITE test_basic_alphabet
32: SEQAN_ENABLE_DEBUG == 1
32: SEQAN_ENABLE_TESTING == 1
32: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
32: SEQAN_ASYNC_IO == 1
32: test_basic_alphabet_adapt_builtins_metafunction_is_char_type OK
32: test_basic_alphabet_adapt_builtins_concepts_bool OK
32: test_basic_alphabet_adapt_builtins_concepts_char OK
32: test_basic_alphabet_adapt_builtins_concepts_short OK
32: test_basic_alphabet_adapt_builtins_concepts_int OK
32: test_basic_alphabet_adapt_builtins_concepts_long OK
32: test_basic_alphabet_adapt_builtins_concepts_int8 OK
32: test_basic_alphabet_adapt_builtins_concepts_uint8 OK
32: test_basic_alphabet_adapt_builtins_concepts_int16 OK
32: test_basic_alphabet_adapt_builtins_concepts_uint16 OK
32: test_basic_alphabet_adapt_builtins_concepts_int32 OK
32: test_basic_alphabet_adapt_builtins_concepts_uint32 OK
32: test_basic_alphabet_adapt_builtins_concepts_int64 OK
32: test_basic_alphabet_adapt_builtins_concepts_uint64 OK
32: test_basic_alphabet_adapt_builtins_concepts_float OK
32: test_basic_alphabet_adapt_builtins_concepts_double OK
32: test_basic_alphabet_qualities_quality_value_size_metafunction OK
32: test_basic_alphabet_qualities_quality_has_qualities_metafunction OK
32: test_basic_alphabet_qualities_convert_quality OK
32: test_basic_alphabet_bio_gap_value_function OK
32: test_basic_alphabet_bio_unknown_value_function OK
32: test_basic_alphabet_storage_bits_per_value_metafunction OK
32: test_basic_alphabet_storage_value_size_metafunction OK
32: test_basic_alphabet_storage_value_size_function OK
32: test_basic_alphabet_storage_integral_for_value_metafunction OK
32: test_basic_alphabet_storage_bytes_per_value_metafunction OK
32: test_basic_alphabet_residue_metafunctions_dna OK
32: test_basic_alphabet_residue_metafunctions_dna5 OK
32: test_basic_alphabet_residue_metafunctions_dna_q OK
32: test_basic_alphabet_residue_metafunctions_dna5_q OK
32: test_basic_alphabet_residue_metafunctions_rna OK
32: test_basic_alphabet_residue_metafunctions_rna5 OK
32: test_basic_alphabet_residue_metafunctions_iupac OK
32: test_basic_alphabet_residue_metafunctions_amino_acid OK
32: test_basic_alphabet_residue_usage_dna OK
32: test_basic_alphabet_residue_usage_dna5 OK
32: test_basic_alphabet_residue_usage_dna_q OK
32: test_basic_alphabet_residue_usage_dna5_q OK
32: test_basic_alphabet_residue_usage_rna OK
32: test_basic_alphabet_residue_usage_rna5 OK
32: test_basic_alphabet_residue_usage_iupac OK
32: test_basic_alphabet_residue_usage_amino_acid OK
32: test_basic_alphabet_profile_metafunctions OK
32: test_basic_alphabet_profile_constructors OK
32: test_basic_alphabet_profile_relations OK
32: test_basic_alphabet_profile_empty OK
32: **************************************
32:  Total Tests: 46
32:  Skipped:     0
32:  Errors:      0
32: **************************************
 21/414 Test  #32: test_test_basic_alphabet ..........................................................   Passed    0.00 sec
test 33
        Start  33: test_test_basic_aggregate

33: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_aggregate
33: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
33: Test timeout computed to be: 10000000
33: TEST SUITE test_basic_aggregate
33: SEQAN_ENABLE_DEBUG == 1
33: SEQAN_ENABLE_TESTING == 1
33: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
33: SEQAN_ASYNC_IO == 1
33: test_basic_aggregates_pair_base_metafunctions OK
33: test_basic_aggregates_pair_base_constructors OK
33: test_basic_aggregates_pair_base_assign OK
33: test_basic_aggregates_pair_base_set OK
33: test_basic_aggregates_pair_base_move OK
33: test_basic_aggregates_pair_base_get_value OK
33: test_basic_aggregates_pair_base_assign_value OK
33: test_basic_aggregates_pair_base_set_value OK
33: test_basic_aggregates_pair_base_move_value OK
33: test_basic_aggregates_pair_base_comparison_same_spec OK
33: test_basic_aggregates_pair_base_comparison_different_spec OK
33: test_basic_aggregates_pair_base_stream_output OK
33: test_basic_aggregates_pair_packed_metafunctions OK
33: test_basic_aggregates_pair_packed_constructors OK
33: test_basic_aggregates_pair_packed_assign OK
33: test_basic_aggregates_pair_packed_set OK
33: test_basic_aggregates_pair_packed_move OK
33: test_basic_aggregates_pair_packed_get_value OK
33: test_basic_aggregates_pair_packed_assign_value OK
33: test_basic_aggregates_pair_packed_set_value OK
33: test_basic_aggregates_pair_packed_move_value OK
33: test_basic_aggregates_pair_packed_comparison_same_spec OK
33: test_basic_aggregates_pair_packed_comparison_different_spec OK
33: test_basic_aggregates_pair_packed_stream_output OK
33: test_basic_aggregates_pair_bit_packed_metafunctions OK
33: test_basic_aggregates_pair_bit_packed_constructors OK
33: test_basic_aggregates_pair_bit_packed_assign OK
33: test_basic_aggregates_pair_bit_packed_set OK
33: test_basic_aggregates_pair_bit_packed_move OK
33: test_basic_aggregates_pair_bit_packed_get_value OK
33: test_basic_aggregates_pair_bit_packed_assign_value OK
33: test_basic_aggregates_pair_bit_packed_set_value OK
33: test_basic_aggregates_pair_bit_packed_move_value OK
33: test_basic_aggregates_pair_bit_packed_comparison_same_spec OK
33: test_basic_aggregates_pair_bit_packed_comparison_different_spec OK
33: test_basic_aggregates_pair_bit_packed_stream_output OK
33: test_basic_aggregates_triple_base_metafunctions OK
33: test_basic_aggregates_triple_base_constructors OK
33: test_basic_aggregates_triple_base_assign OK
33: test_basic_aggregates_triple_base_set OK
33: test_basic_aggregates_triple_base_move OK
33: test_basic_aggregates_triple_base_get_value OK
33: test_basic_aggregates_triple_base_assign_value OK
33: test_basic_aggregates_triple_base_set_value OK
33: test_basic_aggregates_triple_base_move_value OK
33: test_basic_aggregates_triple_base_comparison_same_spec OK
33: test_basic_aggregates_triple_base_comparison_different_spec OK
33: test_basic_aggregates_triple_base_stream_output OK
33: test_basic_aggregates_triple_packed_metafunctions OK
33: test_basic_aggregates_triple_packed_constructors OK
33: test_basic_aggregates_triple_packed_assign OK
33: test_basic_aggregates_triple_packed_set OK
33: test_basic_aggregates_triple_packed_move OK
33: test_basic_aggregates_triple_packed_get_value OK
33: test_basic_aggregates_triple_packed_assign_value OK
33: test_basic_aggregates_triple_packed_set_value OK
33: test_basic_aggregates_triple_packed_move_value OK
33: test_basic_aggregates_triple_packed_comparison_same_spec OK
33: test_basic_aggregates_triple_packed_comparison_different_spec OK
33: test_basic_aggregates_triple_packed_stream_output OK
33: test_basic_aggregates_tuple_base_metafunctions OK
33: test_basic_aggregates_tuple_base_constructors OK
33: test_basic_aggregates_tuple_base_assign OK
33: test_basic_aggregates_tuple_base_set OK
33: test_basic_aggregates_tuple_base_move OK
33: test_basic_aggregates_tuple_base_get_value OK
33: test_basic_aggregates_tuple_base_assign_value OK
33: test_basic_aggregates_tuple_base_set_value OK
33: test_basic_aggregates_tuple_base_move_value OK
33: test_basic_aggregates_tuple_base_shift_left OK
33: test_basic_aggregates_tuple_base_shift_right OK
33: test_basic_aggregates_tuple_base_clear OK
33: test_basic_aggregates_tuple_base_length OK
33: test_basic_aggregates_tuple_base_comparison_same_spec OK
33: test_basic_aggregates_tuple_base_stream_output OK
33: test_basic_aggregates_tuple_bit_packed_metafunctions OK
33: test_basic_aggregates_tuple_bit_packed_constructors OK
33: test_basic_aggregates_tuple_bit_packed_assign OK
33: test_basic_aggregates_tuple_bit_packed_set OK
33: test_basic_aggregates_tuple_bit_packed_move OK
33: test_basic_aggregates_tuple_bit_packed_get_value OK
33: test_basic_aggregates_tuple_bit_packed_assign_value OK
33: test_basic_aggregates_tuple_bit_packed_set_value OK
33: test_basic_aggregates_tuple_bit_packed_move_value OK
33: test_basic_aggregates_tuple_bit_packed_shift_left OK
33: test_basic_aggregates_tuple_bit_packed_shift_right OK
33: test_basic_aggregates_tuple_bit_packed_clear OK
33: test_basic_aggregates_tuple_bit_packed_length OK
33: test_basic_aggregates_tuple_bit_packed_comparison_same_spec OK
33: test_basic_aggregates_tuple_bit_packed_stream_output OK
33: **************************************
33:  Total Tests: 90
33:  Skipped:     0
33:  Errors:      0
33: **************************************
 22/414 Test  #33: test_test_basic_aggregate .........................................................   Passed    0.00 sec
test 34
        Start  34: test_test_basic_allocator

34: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_allocator
34: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
34: Test timeout computed to be: 10000000
34: TEST SUITE test_basic_allocator
34: SEQAN_ENABLE_DEBUG == 1
34: SEQAN_ENABLE_TESTING == 1
34: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
34: SEQAN_ASYNC_IO == 1
34: test_basic_allocator_simple OK
34: test_basic_allocator_pool OK
34: test_basic_allocator_multi_pool OK
34: test_basic_allocator_chunk_pool OK
34: **************************************
34:  Total Tests: 4
34:  Skipped:     0
34:  Errors:      0
34: **************************************
 23/414 Test  #34: test_test_basic_allocator .........................................................   Passed    0.00 sec
test 35
        Start  35: test_test_basic_parallelism

35: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_parallelism
35: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
35: Test timeout computed to be: 10000000
3: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
17: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Serial_> > > OK
35: TEST SUITE test_basic_parallelism
35: SEQAN_ENABLE_DEBUG == 1
35: SEQAN_ENABLE_TESTING == 1
35: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
35: SEQAN_ASYNC_IO == 1
35: test_basic_parallelism_enable_parallelism_macro OK
35: **************************************
35:  Total Tests: 1
35:  Skipped:     0
35:  Errors:      0
35: **************************************
 24/414 Test  #35: test_test_basic_parallelism .......................................................   Passed    0.01 sec
test 36
        Start  36: test_test_basic_math

36: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_math
36: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
36: Test timeout computed to be: 10000000
27: test_bam_io_bam_write_header OK
2: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
18: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Vectorial_> > > OK
36: TEST SUITE test_basic_math
36: SEQAN_ENABLE_DEBUG == 1
36: SEQAN_ENABLE_TESTING == 1
36: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
36: SEQAN_ASYNC_IO == 1
36: test_basic_math_int_pow OK
36: test_basic_math_log2 OK
36: test_basic_math_min OK
36: test_basic_math_max OK
36: test_basic_math_abs OK
36: **************************************
36:  Total Tests: 5
36:  Skipped:     0
36:  Errors:      0
36: **************************************
 25/414 Test  #36: test_test_basic_math ..............................................................   Passed    0.01 sec
test 37
        Start  37: test_test_basic_smart_pointer

37: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_smart_pointer
37: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
37: Test timeout computed to be: 10000000
37: TEST SUITE test_basic_smart_pointer
37: SEQAN_ENABLE_DEBUG == 1
37: SEQAN_ENABLE_TESTING == 1
37: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
37: SEQAN_ASYNC_IO == 1
37: test_basic_smart_pointer_holder_simple_metafunctions OK
37: test_basic_smart_pointer_holder_simple_constructors OK
37: test_basic_smart_pointer_holder_simple_transport OK
37: test_basic_smart_pointer_holder_simple_transport_value OK
37: test_basic_smart_pointer_holder_simple_dependencies OK
37: test_basic_smart_pointer_holder_simple_accessor OK
37: test_basic_smart_pointer_holder_tristate_metafunctions OK
37: test_basic_smart_pointer_holder_tristate_constructors OK
37: test_basic_smart_pointer_holder_tristate_transport OK
37: test_basic_smart_pointer_holder_tristate_transport_value OK
37: test_basic_smart_pointer_holder_tristate_dependencies OK
37: test_basic_smart_pointer_holder_tristate_accessor OK
37: **************************************
37:  Total Tests: 12
37:  Skipped:     0
37:  Errors:      0
37: **************************************
 26/414 Test  #37: test_test_basic_smart_pointer .....................................................   Passed    0.00 sec
test 38
        Start  38: test_test_basic_container

38: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_container
38: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
38: Test timeout computed to be: 10000000
3: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
38: TEST SUITE test_basic_container
38: SEQAN_ENABLE_DEBUG == 1
38: SEQAN_ENABLE_TESTING == 1
38: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
38: SEQAN_ASYNC_IO == 1
38: **************************************
38:  Total Tests: 0
38:  Skipped:     0
38:  Errors:      0
38: **************************************
 27/414 Test  #38: test_test_basic_container .........................................................   Passed    0.00 sec
test 39
        Start  39: test_test_basic_proxy

39: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_proxy
39: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
39: Test timeout computed to be: 10000000
39: TEST SUITE test_basic_proxy
39: SEQAN_ENABLE_DEBUG == 1
39: SEQAN_ENABLE_TESTING == 1
39: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
39: SEQAN_ASYNC_IO == 1
39: test_basic_proxy_iterator_constructors OK
39: test_basic_proxy_iterator_assign OK
39: test_basic_proxy_iterator_getValue OK
39: test_basic_proxy_iterator_comparators OK
39: test_basic_proxy_iterator_stream_read OK
39: test_basic_proxy_iterator_stream_write OK
39: **************************************
39:  Total Tests: 6
39:  Skipped:     0
39:  Errors:      0
39: **************************************
 28/414 Test  #39: test_test_basic_proxy .............................................................   Passed    0.00 sec
test 40
        Start  40: test_test_basic_iterator

40: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_basic_iterator
40: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/basic
40: Test timeout computed to be: 10000000
1: test_align_gaps_anchor_gaps_gap_operations_gaps_center OK
1: test_align_gaps_anchor_gaps_gap_operations_gaps_leading OK
1: test_align_gaps_anchor_gaps_gap_operations_gaps_trailing OK
1: test_align_gaps_anchor_gaps_sequence_interface_ungapped OK
1: test_align_gaps_anchor_gaps_sequence_interface_gaps_center OK
1: test_align_gaps_anchor_gaps_sequence_interface_gaps_leading OK
1: test_align_gaps_anchor_gaps_sequence_interface_gaps_trailing OK
1: test_align_gaps_anchor_gaps_iterator_interface_begin OK
1: test_align_gaps_anchor_gaps_iterator_interface_end OK
1: test_align_gaps_anchor_gaps_iterator_interface_iter OK
1: test_align_gaps_anchor_gaps_source_view_position_ungapped OK
1: test_align_gaps_anchor_gaps_source_view_position_gaps_center OK
1: test_align_gaps_anchor_gaps_source_view_position_gaps_leading OK
1: test_align_gaps_anchor_gaps_source_view_position_gaps_trailing OK
1: test_align_gaps_anchor_gaps_clipping_ungapped OK
1: test_align_gaps_anchor_gaps_clipping_gaps_center OK
1: test_align_gaps_anchor_gaps_clipping_gaps_leading OK
1: test_align_gaps_anchor_gaps_clipping_gaps_trailing OK
1: test_align_gaps_anchor_gaps_clear_clipping OK
1: test_align_gaps_anchor_gaps_copy_gaps OK
1: test_align_gaps_anchor_gaps_copy_clipping OK
1: test_align_gaps_anchor_gaps_clear OK
1: test_align_fragment OK
1: test_align_gaps_iterator_array_metafunctions OK
1: test_align_gaps_iterator_array_trivial_iterator_array_functions OK
1: test_align_gaps_iterator_array_rooted_random_access_iterator_array_functions OK
1: test_align_gaps_iterator_array_movement OK
1: test_align_gaps_iterator_array_relations OK
1: test_align_gaps_iterator_array_pointer_arithmetic OK
1: test_align_gaps_iterator_array_forward_iteration OK
1: test_align_gaps_iterator_array_reverse_iteration OK
1: test_align_gaps_iterator_array_count_gaps_count_characters_is_gap OK
1: test_align_gaps_iterator_array_clipped_count_gaps_count_characters_is_gap OK
1: test_align_gaps_iterator_array_gap_operations_center OK
1: test_align_gaps_iterator_array_gap_operations_leading OK
1: test_align_gaps_iterator_array_gap_operations_trailing OK
1: test_align_gaps_iterator_anchor_metafunctions OK
1: test_align_gaps_iterator_anchor_trivial_iterator_anchor_functions OK
1: test_align_gaps_iterator_anchor_rooted_random_access_iterator_anchor_functions OK
1: test_align_gaps_iterator_anchor_movement OK
1: test_align_gaps_iterator_anchor_relations OK
1: test_align_gaps_iterator_anchor_pointer_arithmetic OK
1: test_align_gaps_iterator_anchor_forward_iteration OK
1: test_align_gaps_iterator_anchor_reverse_iteration OK
1: test_align_gaps_iterator_anchor_count_gaps_count_characters_is_gap OK
1: test_align_gaps_iterator_anchor_clipped_count_gaps_count_characters_is_gap OK
1: test_align_gaps_iterator_anchor_gap_operations_center OK
1: test_align_gaps_iterator_anchor_gap_operations_leading OK
1: test_align_gaps_iterator_anchor_gap_operations_trailing OK
1: test_alignment_dp_profile_is_global_alignment OK
1: test_alignment_dp_profile_is_local_alignment OK
1: test_alignment_dp_profile_is_traceback_enabled OK
1: test_alignment_dp_profile_is_free_end_gaps OK
1: test_dp_band_on_constructor OK
1: test_dp_band_on_lower_diagonal OK
1: test_dp_band_on_upper_diagonal OK
1: test_dp_band_on_set_lower_diagonal OK
1: test_dp_band_on_set_upper_diagonal OK
1: test_dp_band_off_band_size OK
1: test_dp_band_on_band_size OK
1: test_dp_cell_value OK
1: test_dp_cell_reference OK
1: test_dp_cell_default_infinity OK
1: test_dp_cell_linear_constructor OK
1: test_dp_cell_linear_copy_constructor OK
1: test_dp_cell_linear_assignment OK
1: test_dp_cell_linear_score OK
1: test_dp_cell_affine_constructor OK
1: test_dp_cell_affine_copy_constructor OK
1: test_dp_cell_affine_assignment OK
1: test_dp_cell_affine_score OK
1: test_dp_cell_affine_vertical_score OK
1: test_dp_cell_affine_horizontal_score OK
1: test_dp_cell_dynamic_constructor OK
1: test_dp_cell_dynamic_copy_constructor OK
1: test_dp_cell_dynamic_assignment OK
1: test_dp_cell_dynamic_score OK
1: test_alignment_dp_matrix_metafunction_data_host OK
1: test_alignment_dp_matrix_metafunction_size_arr OK
17: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Serial_> > > OK
40: TEST SUITE test_basic_iterator
40: SEQAN_ENABLE_DEBUG == 1
40: SEQAN_ENABLE_TESTING == 1
40: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
40: SEQAN_ASYNC_IO == 1
40: test_basic_iterator_adapt_pointer_metafunctions OK
40: test_basic_iterator_adapt_pointer_transport OK
40: test_basic_iterator_adapt_pointer_transport_value OK
40: test_basic_iterator_adapt_pointer_movement OK
40: test_basic_iterator_adapt_pointer_arithmetics OK
40: test_basic_iterator_adapt_std_iterator_metafunctions OK
40: test_basic_iterator_adapt_std_iterator_constructors OK
40: test_basic_iterator_adapt_std_iterator_transport OK
40: test_basic_iterator_adapt_std_iterator_transport_value OK
40: test_basic_iterator_adapt_std_iterator_movement OK
40: test_basic_iterator_adapt_std_iterator_arithmetics OK
40: test_basic_iterator_adaptor_metafunctions OK
40: test_basic_iterator_adaptor_constructors OK
40: test_basic_iterator_adaptor_transport OK
40: test_basic_iterator_adaptor_transport_value OK
40: test_basic_iterator_adaptor_movement OK
40: test_basic_iterator_adaptor_arithmetics OK
40: test_basic_iterator_adaptor_rooted_functions OK
40: test_basic_iterator_position_metafunctions OK
40: test_basic_iterator_position_constructors OK
40: test_basic_iterator_position_transport OK
40: test_basic_iterator_position_transport_value OK
40: test_basic_iterator_position_movement OK
40: test_basic_iterator_position_arithmetics OK
40: test_basic_iterator_position_rooted_functions OK
40: test_basic_iterator_zip_metafunctions OK
40: test_basic_iterator_zip_constructors OK
40: test_basic_iterator_zip_make_zip_iterator OK
40: test_basic_iterator_zip_transport OK
40: test_basic_iterator_zip_transport_value OK
40: test_basic_iterator_zip_movement OK
40: test_basic_iterator_zip_arithmetics OK
40: **************************************
40:  Total Tests: 32
40:  Skipped:     0
40:  Errors:      0
40: **************************************
 29/414 Test  #40: test_test_basic_iterator ..........................................................   Passed    0.01 sec
test 41
        Start  41: test_test_bed_io

41: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_bed_io
41: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/bed_io
41: Test timeout computed to be: 10000000
41: TEST SUITE test_bed_io
41: SEQAN_ENABLE_DEBUG == 1
41: SEQAN_ENABLE_TESTING == 1
41: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
41: SEQAN_ASYNC_IO == 1
41: test_bed_read_bed3_record OK
41: test_bed_read_bed4_record OK
41: test_bed_read_bed5_record OK
41: test_bed_read_bed6_record OK
41: test_bed_read_bed12_record OK
41: test_bed_write_bed3_record OK
41: test_bed_write_bed4_record OK
41: test_bed_write_bed5_record OK
41: test_bed_write_bed6_record OK
41: test_bed_write_bed12_record OK
41: test_bed_bed_file_read OK
41: test_bed_bed_file_write OK
41: test_bed_io_isOpen_fileIn OK
41: test_bed_io_isOpen_fileOut OK
41: **************************************
41:  Total Tests: 14
41:  Skipped:     0
41:  Errors:      0
41: **************************************
 30/414 Test  #41: test_test_bed_io ..................................................................   Passed    0.01 sec
test 42
        Start  42: test_blast

42: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_blast
42: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/blast
42: Test timeout computed to be: 10000000
27: test_bam_io_bam_write_alignment OK
27: test_bam_io_bam_file_isOpen_fileIn OK
27: test_bam_io_bam_file_isOpen_fileOut OK
20: test_align_parallel_wavefront_multiple_global_alignment_simd OK
20: **************************************
20:  Total Tests: 3
20:  Skipped:     0
20:  Errors:      0
20: **************************************
17: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Serial_> > > OK
17: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Vectorial_> > > OK
2: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
 31/414 Test  #20: test_test_align_parallel_algorithm_sse4_host ......................................   Passed    0.39 sec
test 43
        Start  43: test_test_consensus

43: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_consensus
43: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus
43: Test timeout computed to be: 10000000
2: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
42: TEST SUITE test_blast
42: SEQAN_ENABLE_DEBUG == 1
42: SEQAN_ENABLE_TESTING == 1
42: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
42: SEQAN_ASYNC_IO == 1
42: test_blast_program OK
42: test_blast_context_targs OK
42: test_blast_scoring_scheme_conversion OK
42: test_blast_scoring_scheme OK
42: test_blast_blastmatch_stats_and_score OK
42: test_blast_blastmatch_bit_score_e_value OK
42: test_blast_write_lowlevel OK
42: test_blast_write_tabular_without_comments OK
42: test_blast_write_tabular_without_comments_customfields OK
42: test_blast_write_tabular_without_comments_legacy OK
42: test_blast_write_tabular_without_comments_constexpr OK
42: test_blast_write_tabular_without_comments_customfields_constexpr OK
42: test_blast_write_tabular_without_comments_legacy_constexpr OK
42: test_blast_write_tabular_with_comments OK
21: test_align_parallel_wavefront_multiple_global_alignment_simd OK
21: **************************************
21:  Total Tests: 3
21:  Skipped:     0
21:  Errors:      0
21: **************************************
 32/414 Test  #21: test_test_align_parallel_algorithm_avx2_host ......................................   Passed    0.36 sec
test 44
        Start  44: test_test_consensus_v2

44: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_consensus_v2
44: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/consensus_v2
44: Test timeout computed to be: 10000000
42: test_blast_write_tabular_with_comments_customfields OK
42: test_blast_write_tabular_with_comments_legacy OK
42: test_blast_write_tabular_with_comments_constexpr OK
42: test_blast_write_tabular_with_comments_customfields_constexpr OK
42: test_blast_write_tabular_with_comments_legacy_constexpr OK
42: test_blast_write_report OK
42: test_blast_write_report_constexpr OK
42: test_blast_write_report_constexpr_dynmatrix OK
43: TEST SUITE test_consensus
43: SEQAN_ENABLE_DEBUG == 1
43: SEQAN_ENABLE_TESTING == 1
43: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
43: SEQAN_ASYNC_IO == 1
3: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
44: TEST SUITE test_consensus
44: SEQAN_ENABLE_DEBUG == 1
44: SEQAN_ENABLE_TESTING == 1
44: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
44: SEQAN_ASYNC_IO == 1
1: test_alignment_dp_matrix_data_host OK
1: test_alignment_dp_matrix_data_lengths OK
1: test_alignment_dp_matrix_data_factors OK
1: test_alignment_dp_matrix_check_dimension OK
1: test_alignment_dp_matrix_clear OK
1: test_alignment_dp_matrix_host OK
1: test_alignment_dp_matrix_set_host OK
1: test_alignment_dp_matrix_begin_standard OK
1: test_alignment_dp_matrix_begin_rooted OK
1: test_alignment_dp_matrix_end_standard OK
1: test_alignment_dp_matrix_end_rooted OK
1: test_alignment_dp_matrix_full_constructor OK
1: test_alignment_dp_matrix_full_copy_constructor OK
1: test_alignment_dp_matrix_full_assigment OK
1: test_alignment_dp_matrix_full_metafunction_value OK
1: test_alignment_dp_matrix_full_metafunction_reference OK
1: test_alignment_dp_matrix_full_metafunction_getvalue OK
1: test_alignment_dp_matrix_full_metafunction_position OK
1: test_alignment_dp_matrix_full_metafunction_size OK
1: test_alignment_dp_matrix_full_metafunction_host OK
1: test_alignment_dp_matrix_full_metafunction_iterator_standard OK
1: test_alignment_dp_matrix_full_metafunction_iterator_rooted OK
1: test_alignment_dp_matrix_full_resize OK
1: test_alignment_dp_matrix_full_resize_with_value OK
1: test_alignment_dp_matrix_full_value OK
1: test_alignment_dp_matrix_full_value_with_coordinates OK
1: test_alignment_dp_matrix_full_set_length OK
1: test_alignment_dp_matrix_full_length_dimension OK
1: test_alignment_dp_matrix_full_length OK
1: test_alignment_dp_matrix_full_empty OK
1: test_alignment_dp_matrix_full_coordinate OK
1: test_alignment_dp_matrix_sparse_constructor OK
1: test_alignment_dp_matrix_sparse_copy_constructor OK
1: test_alignment_dp_matrix_sparse_assigment OK
1: test_alignment_dp_matrix_sparse_metafunction_value OK
1: test_alignment_dp_matrix_sparse_metafunction_reference OK
1: test_alignment_dp_matrix_sparse_metafunction_getvalue OK
1: test_alignment_dp_matrix_sparse_metafunction_position OK
1: test_alignment_dp_matrix_sparse_metafunction_size OK
1: test_alignment_dp_matrix_sparse_metafunction_host OK
1: test_alignment_dp_matrix_sparse_metafunction_iterator_standard OK
1: test_alignment_dp_matrix_sparse_metafunction_iterator_rooted OK
1: test_alignment_dp_matrix_sparse_resize OK
1: test_alignment_dp_matrix_sparse_resize_with_value OK
17: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Vectorial_> > > OK
1: test_alignment_dp_matrix_sparse_value OK
1: test_alignment_dp_matrix_sparse_value_with_coordinates OK
1: test_alignment_dp_matrix_sparse_set_length OK
1: test_alignment_dp_matrix_sparse_length_dimension OK
1: test_alignment_dp_matrix_sparse_length OK
1: test_alignment_dp_matrix_sparse_empty OK
1: test_alignment_dp_matrix_sparse_coordinate OK
43: test_consensus_realign_one_contig_small OK
43: test_consensus_consensus_score_sequence_entry_consensus_score OK
43: test_consensus_consensus_score_sequence_entry_fractional_score OK
43: test_consensus_consensus_score_sequence_entry_weightedconsensus_score OK
43: test_consensus_sequence_entry_for_score_metafunction_consensus_score OK
43: test_consensus_sequence_entry_for_score_metafunction_fractional_score OK
43: test_consensus_sequence_entry_for_score_metafunction_weightedconsensus_score OK
43: test_consensus_sequence_entry_for_score_consensus_score OK
43: test_consensus_sequence_entry_for_score_fractional_score OK
43: test_consensus_sequence_entry_for_score_weightedconsensus_score OK
43: test_consensus_host_consensus_score OK
43: test_consensus_host_fractional_score OK
43: test_consensus_host_weightedconsensus_score OK
43: test_consensus_position_consensus_score OK
43: test_consensus_position_fractional_score OK
43: test_consensus_position_weightedconsensus_score OK
43: test_consensus_value_consensus_score OK
43: test_consensus_value_fractional_score OK
43: test_consensus_value_weightedconsensus_score OK
43: **************************************
43:  Total Tests: 19
43:  Skipped:     0
43:  Errors:      0
43: **************************************
 33/414 Test  #43: test_test_consensus ...............................................................   Passed    0.02 sec
test 45
        Start  45: test_test_find

45: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_find
45: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/find
45: Test timeout computed to be: 10000000
45: TEST SUITE test_find
45: SEQAN_ENABLE_DEBUG == 1
45: SEQAN_ENABLE_TESTING == 1
45: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
45: SEQAN_ASYNC_IO == 1
45: test_myers_find_begin OK
27: test_bam_io_bam_file_sam_file_size OK
27: test_bam_io_bam_file_sam_read_header OK
27: test_bam_io_bam_file_sam_read_records OK
18: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Vectorial_> > > OK
18: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Serial_> > > OK
17: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Vectorial_> > > OK
4: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
44: test_consensus_consensus_alignment_coordinates OK
1: test_alignment_dp_matrix_navigator_score_matrix_full_init_unbanded OK
1: test_alignment_dp_matrix_navigator_score_matrix_full_init_banded OK
1: test_alignment_dp_matrix_navigator_score_matrix_full_go_next_cell OK
1: test_alignment_dp_matrix_navigator_score_matrix_full_assign_value OK
1: test_alignment_dp_matrix_navigator_score_matrix_full_value OK
1: test_alignment_dp_matrix_navigator_score_matrix_full_previous_cell_horizontal OK
1: test_alignment_dp_matrix_navigator_score_matrix_full_coordinate OK
1: test_alignment_dp_matrix_navigator_score_matrix_full_container OK
1: test_alignment_dp_matrix_navigator_score_matrix_sparse_init_unbanded OK
1: test_alignment_dp_matrix_navigator_score_matrix_sparse_init_banded OK
1: test_alignment_dp_matrix_navigator_score_matrix_sparse_go_next OK
1: test_alignment_dp_matrix_navigator_score_matrix_sparse_assign_value OK
1: test_alignment_dp_matrix_navigator_score_matrix_sparse_value OK
1: test_alignment_dp_matrix_navigator_score_matrix_sparse_previous_cell_horizontal OK
1: test_alignment_dp_matrix_navigator_score_matrix_sparse_coordinate OK
1: test_alignment_dp_matrix_navigator_score_matrix_sparse_container OK
1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_init_unbanded OK
1: test_alignment_dp_matrix_navigator_trace_matrix_disabled_init_unbanded OK
1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_init_banded OK
1: test_alignment_dp_matrix_navigator_trace_matrix_disabled_init_banded OK
1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_go_next OK
18: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Serial_> > > OK
3: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
26: TEST SUITE test_arg_parse
26: SEQAN_ENABLE_DEBUG == 1
26: SEQAN_ENABLE_TESTING == 1
26: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
26: SEQAN_ASYNC_IO == 1
26: test_path_availability OK
26: test_delete_version_files OK
26: test_create_files OK
2: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
27: test_bam_io_bam_file_sam_write_header OK
18: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Serial_> > > OK
27: test_bam_io_bam_file_sam_write_records OK
17: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Vectorial_> > > OK
17: **************************************
17:  Total Tests: 24
17:  Skipped:     0
17:  Errors:      0
17: **************************************
26: test_option_on OK
26: test_delete_version_files OK
26: test_option_off OK
26: test_delete_version_files OK
 34/414 Test  #17: test_test_align_parallel_interface_sse4_host ......................................   Passed    0.65 sec
test 46
        Start  46: test_test_gff_io

46: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_gff_io
46: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/gff_io
46: Test timeout computed to be: 10000000
2: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
46: TEST SUITE test_gff_io
46: SEQAN_ENABLE_DEBUG == 1
46: SEQAN_ENABLE_TESTING == 1
46: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
46: SEQAN_ASYNC_IO == 1
2: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
18: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Serial_> > > OK
18: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Serial_>, seqan::Tag<seqan::Vectorial_> > > OK
18: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::Tag<seqan::Parallel_>, seqan::Tag<seqan::Vectorial_> > > OK
26: test_smaller_seqan_version OK
26: test_delete_version_files OK
26: test_delete_version_files OK
4: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
44: test_consensus_consensus_alignment_contig_ids OK
1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_assign_value OK
1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_value OK
1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_coordinate OK
1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_container OK
1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_to_global_position OK
1: test_dp_formula_trace_global_linear_diagonal_direction OK
1: test_dp_formula_trace_global_linear_horizontal_direction OK
1: test_dp_formula_trace_global_linear_vertical_direction OK
1: test_dp_formula_trace_global_linear_upper_band_direction OK
1: test_dp_formula_trace_global_linear_lower_band_direction OK
1: test_dp_formula_trace_global_linear_all_direction OK
1: test_dp_formula_trace_global_affine_diagonal_direction OK
1: test_dp_formula_trace_global_affine_horizontal_direction OK
1: test_dp_formula_trace_global_affine_vertical_direction OK
1: test_dp_formula_trace_global_affine_upper_band_direction OK
1: test_dp_formula_trace_global_affine_lower_band_direction OK
1: test_dp_formula_trace_global_affine_all_direction OK
1: test_dp_formula_trace_global_dynamic_diagonal_direction OK
1: test_dp_formula_trace_global_dynamic_horizontal_direction OK
1: test_dp_formula_trace_global_dynamic_vertical_direction OK
1: test_dp_formula_trace_global_dynamic_upper_band_direction OK
1: test_dp_formula_trace_global_dynamic_lower_band_direction OK
1: test_dp_formula_trace_global_dynamic_all_direction OK
1: test_dp_formula_trace_local_linear_diagonal_direction OK
1: test_dp_formula_trace_local_linear_horizontal_direction OK
1: test_dp_formula_trace_local_linear_vertical_direction OK
1: test_dp_formula_trace_local_linear_upper_band_direction OK
1: test_dp_formula_trace_local_linear_lower_band_direction OK
1: test_dp_formula_trace_local_linear_all_direction OK
1: test_dp_formula_trace_local_affine_diagonal_direction OK
1: test_dp_formula_trace_local_affine_horizontal_direction OK
1: test_dp_formula_trace_local_affine_vertical_direction OK
1: test_dp_formula_trace_local_affine_upper_band_direction OK
1: test_dp_formula_trace_local_affine_lower_band_direction OK
1: test_dp_formula_trace_local_affine_all_direction OK
1: test_dp_formula_notrace_diagonal_direction OK
1: test_dp_formula_notrace_horizontal_direction OK
1: test_dp_formula_notrace_vertical_direction OK
1: test_dp_formula_notrace_upper_band_direction OK
1: test_dp_formula_notrace_lower_band_direction OK
1: test_dp_formula_notrace_all_direction OK
1: test_alignment_traceback_tracesegment_constructor OK
1: test_alignment_traceback_tracesegment_assignment OK
1: test_alignment_traceback_tracesegment_position OK
1: test_alignment_traceback_tracesegment_size OK
1: test_alignment_traceback_tracesegment_get_begin_horizontal OK
1: test_alignment_traceback_tracesegment_get_begin_vertical OK
1: test_alignment_traceback_tracesegment_get_end_horizontal OK
1: test_alignment_traceback_tracesegment_get_end_vertical OK
1: test_alignment_traceback_tracesegment_translate_trace_value OK
1: test_alignment_traceback_tracesegment_operator_stream OK
1: test_alignment_traceback_tracesegment_operator_equal OK
1: test_alignment_traceback_tracesegment_operator_unequal OK
1: test_alignment_traceback_tracesegment_record_segment OK
1: test_align2_trace_adaptor_trace_segment OK
1: test_align2_trace_adaptor_record_trace_segment OK
1: test_align2_trace_adaptor_adapt_file OK
42: test_blast_read_lowlevel OK
26: test_smaller_app_version OK
26: test_delete_version_files OK
26: test_greater_app_version OK
26: test_delete_version_files OK
18: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<void>, seqan::Tag<seqan::Vectorial_> > > OK
26: test_time_out OK
26: **************************************
26:  Total Tests: 15
26:  Skipped:     0
26:  Errors:      0
26: **************************************
 35/414 Test  #26: test_test_arg_parse_version_check .................................................   Passed    0.26 sec
test 47
        Start  47: test_test_graph_algorithms

47: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_graph_algorithms
47: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_algorithms
47: Test timeout computed to be: 10000000
47: TEST SUITE test_graph_algorithms
47: SEQAN_ENABLE_DEBUG == 1
47: SEQAN_ENABLE_TESTING == 1
47: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
47: SEQAN_ASYNC_IO == 1
47: test_heap_tree OK
47: test_breadth_first_search OK
47: test_depth_first_search OK
47: test_topological_sort OK
47: test_strongly_connected_components OK
47: test_connected_components OK
47: test_prims_algorithm OK
47: test_union_find OK
47: test_kruskals_algorithm OK
47: test_mst_all OK
47: test_dag_shortest_path OK
47: test_bellmann_ford OK
47: test_dijkstra OK
47: test_all_pairs_shortest_path OK
47: test_floyd_warshall OK
47: test_transitive_closure OK
47: test_ford_fulkerson OK
47: test_path_growing_algorithm OK
47: test_longest_increasing_subsequence OK
47: test_longest_common_subsequence OK
47: test_heaviest_increasing_subsequence OK
47: test_hmm_algorithm OK
47: **************************************
47:  Total Tests: 22
47:  Skipped:     0
47:  Errors:      0
47: **************************************
 36/414 Test  #47: test_test_graph_algorithms ........................................................   Passed    0.01 sec
test 48
        Start  48: test_test_graph_align

48: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_graph_align
48: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_align
48: Test timeout computed to be: 10000000
18: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple<seqan::ExecutionPolicy<seqan::WavefrontAlignment<seqan::Tag<seqan::BlockOffsetOptimization_> >, seqan::Tag<seqan::Vectorial_> > > OK
18: **************************************
18:  Total Tests: 24
18:  Skipped:     0
18:  Errors:      0
18: **************************************
44: test_consensus_consensus_alignment_no_contig_ids OK
48: TEST SUITE test_graph_align
48: SEQAN_ENABLE_DEBUG == 1
48: SEQAN_ENABLE_TESTING == 1
48: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
48: SEQAN_ASYNC_IO == 1
48: Test_Refinement_AlignmentGraphNoEdgeWeights OK
48: Test_Refinement_AlignmentGraphEdgeWeights OK
48: Test_Refinement_AlignmentGraphIterators OK
48: Test_Refinement_AlignmentGraphOutput OK
48: Test_Refinement_HeaviestCommonSubsequence OK
48: Test_Refinement_OutEdgeIteratorAlignment OK
48: RefineMatchesSelfEdges OK
48: RefineAlign SKIPPED
48: RefineInexactFragment OK
48: **************************************
48:  Total Tests: 9
48:  Skipped:     1
48:  Errors:      0
48: **************************************
 37/414 Test  #18: test_test_align_parallel_interface_avx2_host ......................................   Passed    0.70 sec
 38/414 Test  #48: test_test_graph_align .............................................................   Passed    0.01 sec
test 49
        Start  49: test_test_graph_msa

49: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_graph_msa
49: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_msa
49: Test timeout computed to be: 10000000
test 50
        Start  50: test_test_graph_types_property_map

50: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_graph_types_property_map
50: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types
50: Test timeout computed to be: 10000000
44: test_consensus_consensus_alignment_global_alignment OK
44: **************************************
44:  Total Tests: 4
44:  Skipped:     0
44:  Errors:      0
44: **************************************
46: test_store_io_read_record_context_gff OK
46: test_store_io_write_record_context_gff OK
24: test_alignment_free_alignment_free_comparison OK
24: test_alignment_free_count_kmers OK
24: test_alignment_free_calculate_periodicity OK
24: test_alignment_free_calculate_overlap_indicator OK
24: test_alignment_free_string_to_string_set OK
24: test_alignment_free_cut_ns OK
24: **************************************
24:  Total Tests: 14
24:  Skipped:     0
24:  Errors:      0
24: **************************************
49: TEST SUITE test_graph_msa
49: SEQAN_ENABLE_DEBUG == 1
49: SEQAN_ENABLE_TESTING == 1
49: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
49: SEQAN_ASYNC_IO == 1
49: test_graph_msa_guide_tree_neighbour_joining OK
 39/414 Test  #24: test_test_alignment_free ..........................................................   Passed    0.37 sec
 40/414 Test  #44: test_test_consensus_v2 ............................................................   Passed    0.11 sec
test 51
        Start  51: test_test_graph_types_derived

51: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_graph_types_derived
51: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types
51: Test timeout computed to be: 10000000
test 52
        Start  52: test_test_graph_types_iterators

52: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_graph_types_iterators
52: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types
52: Test timeout computed to be: 10000000
50: TEST SUITE test_graph_types_property_map
50: SEQAN_ENABLE_DEBUG == 1
50: SEQAN_ENABLE_TESTING == 1
50: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
50: SEQAN_ASYNC_IO == 1
50: test_graph_types_property_map_external OK
50: test_graph_types_property_map_external_assign_vertex_map OK
50: test_graph_types_property_map_external_assign_edge_map OK
50: test_graph_types_property_internal_pointer_map OK
50: test_graph_types_property_internal_pointer_map_assign_edge_map_member OK
50: test_graph_types_property_internal_map OK
50: test_graph_types_property_internal_map_assign_edge_map OK
50: **************************************
50:  Total Tests: 7
50:  Skipped:     0
50:  Errors:      0
50: **************************************
2: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
51: TEST SUITE test_graph_types_derived
51: SEQAN_ENABLE_DEBUG == 1
51: SEQAN_ENABLE_TESTING == 1
51: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
51: SEQAN_ASYNC_IO == 1
51: test_graph_types_derived_set_oracle OK
51: test_graph_types_derived_trie OK
51: test_graph_types_derived_oracle OK
51: **************************************
51:  Total Tests: 3
51:  Skipped:     0
51:  Errors:      0
51: **************************************
 41/414 Test  #50: test_test_graph_types_property_map ................................................   Passed    0.01 sec
 42/414 Test  #51: test_test_graph_types_derived .....................................................   Passed    0.00 sec
test 53
        Start  53: test_test_graph_types_types

53: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_graph_types_types
53: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types
53: Test timeout computed to be: 10000000
test 54
        Start  54: test_test_graph_types_utils

54: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_graph_types_utils
54: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/graph_types
54: Test timeout computed to be: 10000000
52: TEST SUITE test_graph_types_iterators
52: SEQAN_ENABLE_DEBUG == 1
52: SEQAN_ENABLE_TESTING == 1
52: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
52: SEQAN_ASYNC_IO == 1
52: test_graph_types_iterators_vertex_iterator OK
52: test_graph_types_iterators_out_edge_iterator OK
52: test_graph_types_iterators_edge_iterator OK
52: test_graph_types_iterators_ajacency_iterator OK
52: test_graph_types_bfs_iter OK
52: test_graph_types_dfs_preorder_iter OK
52: **************************************
52:  Total Tests: 6
52:  Skipped:     0
52:  Errors:      0
52: **************************************
27: test_bam_io_bam_file_bam_file_size OK
53: TEST SUITE test_graph_types_property_map
53: SEQAN_ENABLE_DEBUG == 1
53: SEQAN_ENABLE_TESTING == 1
53: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
53: SEQAN_ASYNC_IO == 1
53: test_graph_types_types_directed OK
53: test_graph_types_types_undirected OK
53: test_graph_types_types_automaton OK
53: test_graph_types_types_word_graph OK
53: test_graph_types_types_word_tree OK
53: test_graph_types_types_hmm OK
53: **************************************
53:  Total Tests: 6
53:  Skipped:     0
53:  Errors:      0
53: **************************************
 43/414 Test  #52: test_test_graph_types_iterators ...................................................   Passed    0.01 sec
test 55
        Start  55: test_test_index_creation

55: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_creation
55: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
55: Test timeout computed to be: 10000000
27: test_bam_io_bam_file_bam_read_header OK
 44/414 Test  #53: test_test_graph_types_types .......................................................   Passed    0.01 sec
54: TEST SUITE test_graph_types_utils
54: SEQAN_ENABLE_DEBUG == 1
54: SEQAN_ENABLE_TESTING == 1
54: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
54: SEQAN_ASYNC_IO == 1
54: test_graph_types_utils_graph_drawing OK
54: **************************************
54:  Total Tests: 1
54:  Skipped:     0
54:  Errors:      0
54: **************************************
 45/414 Test  #54: test_test_graph_types_utils .......................................................   Passed    0.01 sec
test 56
        Start  56: test_test_index_crosscompare_char

56: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_crosscompare_char
56: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
56: Test timeout computed to be: 10000000
test 57
        Start  57: test_test_index_crosscompare_char_dfi

57: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_crosscompare_char_dfi
57: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
57: Test timeout computed to be: 10000000
27: test_bam_io_bam_file_bam_read_records OK
55: TEST SUITE test_index
55: SEQAN_ENABLE_DEBUG == 1
55: SEQAN_ENABLE_TESTING == 1
55: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
55: SEQAN_ASYNC_IO == 1
55: testIndexModifiedStringReverseEsa OK
55: testIndexModifiedStringReverseFM OK
55: testIndexModifiedStringViewEsa OK
55: testIndexModifiedStringViewFM OK
55: testIssue519 OK
56: TEST SUITE test_index
56: SEQAN_ENABLE_DEBUG == 1
56: SEQAN_ENABLE_TESTING == 1
56: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
56: SEQAN_ASYNC_IO == 1
56: testIndexCrossCompareChar OK
56: **************************************
56:  Total Tests: 1
56:  Skipped:     0
56:  Errors:      0
56: **************************************
 46/414 Test  #56: test_test_index_crosscompare_char .................................................   Passed    0.01 sec
test 58
        Start  58: test_test_index_crosscompare_dna

58: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_crosscompare_dna
58: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
58: Test timeout computed to be: 10000000
57: TEST SUITE test_index
57: SEQAN_ENABLE_DEBUG == 1
57: SEQAN_ENABLE_TESTING == 1
57: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
57: SEQAN_ASYNC_IO == 1
57: testIndexCrossCompareCharDfi OK
57: **************************************
57:  Total Tests: 1
57:  Skipped:     0
57:  Errors:      0
57: **************************************
 47/414 Test  #57: test_test_index_crosscompare_char_dfi .............................................   Passed    0.01 sec
test 59
        Start  59: test_test_index_crosscompare_dna_dfi

59: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_crosscompare_dna_dfi
59: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
59: Test timeout computed to be: 10000000
58: TEST SUITE test_index
58: SEQAN_ENABLE_DEBUG == 1
58: SEQAN_ENABLE_TESTING == 1
58: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
58: SEQAN_ASYNC_IO == 1
58: testIndexCrossCompareDna OK
59: TEST SUITE test_index
59: SEQAN_ENABLE_DEBUG == 1
59: SEQAN_ENABLE_TESTING == 1
59: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
59: SEQAN_ASYNC_IO == 1
59: testIndexCrossCompareDnaDfi OK
59: **************************************
59:  Total Tests: 1
59:  Skipped:     0
59:  Errors:      0
59: **************************************
 48/414 Test  #59: test_test_index_crosscompare_dna_dfi ..............................................   Passed    0.00 sec
test 60
        Start  60: test_test_index_qgram

60: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_qgram
60: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
60: Test timeout computed to be: 10000000
49: test_graph_msa_guide_tree_upgma_weight_avg OK
49: test_graph_msa_guide_tree_upgma_avg OK
1: test_align2_trace_adaptor_adapt_align OK
1: test_align2_trace_adaptor_adapt_fragments OK
46: test_store_io_comment_processing_context_gff OK
2: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
45: test_myers_find_banded OK
45: test_myers_find_banded_csp OK
45: test_myers_find_infix_find_begin_at_start OK
45: test_myers_find_infix_find_begin_within OK
45: test_find_on_segments OK
45: test_find_hamming_simple OK
45: test_find_hamming_simple_regression_rmbench OK
45: test_regression_rmbench OK
45: test_find_online_Simple OK
45: test_find_online_Horspool OK
45: test_find_online_ShiftAnd OK
45: test_find_online_ShiftOr OK
45: test_find_online_BndmAlgo OK
45: test_find_online_BFAM_Oracle OK
45: test_find_online_BFAM_Trie OK
45: test_find_online_wildcards OK
45: test_find_online_multi_AhoCorasick OK
45: test_find_online_multi_MultipleShiftAnd OK
45: test_find_online_multi_SetHorspool OK
45: test_find_online_multi_WuManber OK
45: test_find_online_multi_MultiBFAM_Oracle OK
45: test_find_online_multi_MultiBFAM_Trie OK
45: test_find_approx_prefix_edit_dist_dpsearch OK
45: test_approx_prefix_edit_dist_myers OK
45: test_approx_edit_dist_dp_search_simple_score OK
45: test_approx_edit_dist_myers OK
45: test_approx_edit_dp_search_simple_score_legacy_case OK
45: test_approx_edit_dist_abndm_algo OK
45: test_approx_edit_dist_pex_non_hierarchical OK
45: test_approx_edit_dist_pex_hierarchical OK
45: test_approx_edit_dist_pex_non_hierarchical_aho_corasick OK
45: test_approx_edit_dist_pex_non_hierarchical_multi_bfam OK
45: test_find_hamming_simple OK
45: test_pattern_copycon OK
45: test_pattern_assign OK
45: test_pattern_movecon OK
45: test_pattern_moveassign OK
45: test_pattern_set_host OK
45: **************************************
45:  Total Tests: 39
45:  Skipped:     0
45:  Errors:      0
45: **************************************
4: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
42: test_blast_read_tabular_without_comments OK
 49/414 Test  #45: test_test_find ....................................................................   Passed    0.17 sec
test 61
        Start  61: test_test_index_sa_bwtwalk

61: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_sa_bwtwalk
61: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
61: Test timeout computed to be: 10000000
60: TEST SUITE test_index
60: SEQAN_ENABLE_DEBUG == 1
60: SEQAN_ENABLE_TESTING == 1
60: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
60: SEQAN_ASYNC_IO == 1
60: testStepSize OK
60: testGappedShapes OK
60: testUngappedShapes OK
60: testUngappedQGramIndex OK
60: start
60: scan took 3.89793e-06 seconds.
60: start write
60: writing took 4.53799e-06 seconds.
60: reading took 6.00936e-07 seconds.
60: start
60: scan took 1.273e-06 seconds.
60: start write
60: writing took 1.573e-06 seconds.
60: reading took 2.91038e-07 seconds.
60: testUngappedQGramIndexMulti OK
60: testQGramFind OK
60: **************************************
60:  Total Tests: 6
60:  Skipped:     0
60:  Errors:      0
60: **************************************
 50/414 Test  #60: test_test_index_qgram .............................................................   Passed    0.05 sec
test 62
        Start  62: test_test_index_shapes

62: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_shapes
62: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
62: Test timeout computed to be: 10000000
61: TEST SUITE test_index
61: SEQAN_ENABLE_DEBUG == 1
61: SEQAN_ENABLE_TESTING == 1
61: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
61: SEQAN_ASYNC_IO == 1
62: TEST SUITE test_index
62: SEQAN_ENABLE_DEBUG == 1
62: SEQAN_ENABLE_TESTING == 1
62: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
62: SEQAN_ASYNC_IO == 1
62: testShapes OK
62: **************************************
62:  Total Tests: 1
62:  Skipped:     0
62:  Errors:      0
62: **************************************
 51/414 Test  #62: test_test_index_shapes ............................................................   Passed    0.00 sec
test 63
        Start  63: test_test_index_drawing

63: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_drawing
63: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
63: Test timeout computed to be: 10000000
63: TEST SUITE test_index_drawing
63: SEQAN_ENABLE_DEBUG == 1
63: SEQAN_ENABLE_TESTING == 1
63: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
63: SEQAN_ASYNC_IO == 1
63: test_index_drawing_esa_dot OK
63: **************************************
63:  Total Tests: 1
63:  Skipped:     0
63:  Errors:      0
63: **************************************
 52/414 Test  #63: test_test_index_drawing ...........................................................   Passed    0.00 sec
test 64
        Start  64: test_test_index_fm_rank_dictionary

64: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_fm_rank_dictionary
64: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
64: Test timeout computed to be: 10000000
49: test_graph_msa_guide_tree_upgma_min OK
64: TEST SUITE tests
64: SEQAN_ENABLE_DEBUG == 1
64: SEQAN_ENABLE_TESTING == 1
64: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
64: SEQAN_ASYNC_IO == 1
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::Naive<void, seqan::RDConfig<unsigned long, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
3: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<bool, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
64: RankDictionaryTest_Constructor type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<bool, seqan::Naive<void, seqan::RDConfig<unsigned long, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
58: testIndexCrossCompareDnaStrings OK
58: **************************************
58:  Total Tests: 2
58:  Skipped:     0
58:  Errors:      0
58: **************************************
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
2: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
 53/414 Test  #58: test_test_index_crosscompare_dna ..................................................   Passed    0.09 sec
test 65
        Start  65: test_test_index_fm_sparse_string

65: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_fm_sparse_string
65: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
65: Test timeout computed to be: 10000000
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<bool, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
2: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
65: TEST SUITE test_fm_index_sparse_string
65: SEQAN_ENABLE_DEBUG == 1
65: SEQAN_ENABLE_TESTING == 1
65: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
65: SEQAN_ASYNC_IO == 1
65: sparse_string_get_value OK
65: sparse_string_clear_length_resize OK
65: sparse_string_empty OK
65: sparse_string_get_fibre OK
65: **************************************
65:  Total Tests: 4
65:  Skipped:     0
65:  Errors:      0
65: **************************************
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
 54/414 Test  #65: test_test_index_fm_sparse_string ..................................................   Passed    0.00 sec
test 66
        Start  66: test_test_index_base

66: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_base
66: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
66: Test timeout computed to be: 10000000
2: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_CreateRankDictionary type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<bool, seqan::Naive<void, seqan::RDConfig<unsigned long, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
2: **************************************
2:  Total Tests: 48
2:  Skipped:     0
2:  Errors:      0
2: **************************************
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
66: TEST SUITE tests
66: SEQAN_ENABLE_DEBUG == 1
66: SEQAN_ENABLE_TESTING == 1
66: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
66: SEQAN_ASYNC_IO == 1
66: IndexTest_IndexCreate type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
 55/414 Test   #2: test_test_align_simd_global_equal_length ..........................................   Passed    0.89 sec
test 67
        Start  67: test_test_index_fm

67: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_fm
67: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
67: Test timeout computed to be: 10000000
66: IndexTest_IndexCreate type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_IndexCreate type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_IndexCreate type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_IndexCreate type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
49: test_graph_msa_guide_tree_upgma_max OK
49: test_distances OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
67: TEST SUITE tests
67: SEQAN_ENABLE_DEBUG == 1
67: SEQAN_ENABLE_TESTING == 1
67: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
67: SEQAN_ASYNC_IO == 1
67: LFTest_IsSentinel type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, WTFMIndexConfig<void, unsigned long> > > OK
67: LFTest_IsSentinel type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, WTFMIndexConfig<void, unsigned long> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<bool, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_ClearEmpty type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
49: test_libraries OK
49: test_external_libraries OK
49: test_triplet_extension OK
49: test_sop OK
49: test_progressive OK
49: test_reversable_fragments OK
49: **************************************
49:  Total Tests: 12
49:  Skipped:     0
49:  Errors:      0
49: **************************************
 56/414 Test  #49: test_test_graph_msa ...............................................................   Passed    0.13 sec
test 68
        Start  68: test_test_index_bifm

68: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_bifm
68: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
68: Test timeout computed to be: 10000000
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<bool, seqan::Naive<void, seqan::RDConfig<unsigned long, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<bool, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
46: test_store_io_read_record_context_gtf OK
68: TEST SUITE tests
68: SEQAN_ENABLE_DEBUG == 1
68: SEQAN_ENABLE_TESTING == 1
68: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
68: SEQAN_ASYNC_IO == 1
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
42: test_blast_read_tabular_without_comments_customfields OK
42: test_blast_read_tabular_without_comments_legacy OK
42: test_blast_read_tabular_without_comments_constexpr OK
42: test_blast_read_tabular_without_comments_customfields_constexpr OK
42: test_blast_read_tabular_without_comments_legacy_constexpr OK
42: test_blast_read_tabular_with_comments OK
1: test_align2_trace_adaptor_adapt_alignment_graph OK
1: test_align2_traceback_linear_unbanded_alignment OK
1: test_align2_traceback_linear_normal_banded_alignment OK
1: test_align2_traceback_linear_small_banded_alignment OK
1: test_align2_traceback_linear_wide_banded_alignment OK
1: test_align2_traceback_affine OK
1: test_align2_traceback_gaps_left_linear_gaps OK
1: test_align2_traceback_gaps_right_linear_gaps OK
1: test_align2_traceback_gaps_left_affine_gaps OK
1: test_align2_traceback_gaps_right_affine_gaps OK
1: test_alignment_algorithms_band_position_case1 OK
1: test_alignment_algorithms_band_position_case2 OK
1: test_alignment_algorithms_band_position_case3 OK
1: test_alignment_algorithms_band_position_case4 OK
1: test_alignment_algorithms_band_position_case5 OK
1: test_alignment_algorithms_band_position_case6 OK
1: test_alignment_algorithms_band_position_case7 OK
1: test_alignment_algorithms_band_position_case8 OK
1: test_alignment_algorithms_band_position_case9 OK
1: test_alignment_algorithms_band_position_case10 OK
1: test_alignment_algorithms_band_position_case11 OK
1: test_alignment_algorithms_band_position_case12 OK
1: test_alignment_algorithms_band_position_case13 OK
1: test_alignment_algorithms_band_position_case14 OK
1: test_alignment_algorithms_band_position_case15 OK
1: test_alignment_algorithms_band_position_case16 OK
1: test_alignment_algorithms_band_position_case17 OK
1: test_alignment_algorithms_band_position_case18 OK
1: test_alignment_algorithms_band_position_case19 OK
1: test_alignment_algorithms_band_position_case20 OK
1: test_alignment_algorithms_band_position_case21 OK
1: test_alignment_algorithms_band_position_case22 OK
1: test_alignment_algorithms_band_position_case23 OK
1: test_alignment_algorithms_band_position_case24 OK
1: test_alignment_algorithms_band_position_case25 OK
1: test_alignment_algorithms_band_position_case26 OK
1: test_alignment_algorithms_band_position_case27 OK
1: test_alignment_algorithms_band_position_case28 OK
1: test_alignment_algorithms_band_position_case29 OK
1: test_alignment_algorithms_band_position_case30 OK
1: test_alignment_algorithms_band_position_case31 OK
1: test_alignment_algorithms_align_gaps_global_linear OK
1: test_alignment_algorithms_gaps_gaps_global_linear OK
1: test_alignment_algorithms_graph_gaps_global_linear OK
1: test_alignment_algorithms_fragments_gaps_global_linear OK
1: test_align_global_alignment_shorter_interfaces_linear OK
1: test_alignment_algorithms_score_global_linear OK
64: RankDictionaryTest_GetValue type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<bool, seqan::Naive<void, seqan::RDConfig<unsigned long, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
3: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
4: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
46: test_store_io_read_record_gtf_pseudogenes OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
27: test_bam_io_bam_file_bam_read_ex1 OK
42: test_blast_read_tabular_with_comments_customfields OK
42: test_blast_read_tabular_with_comments_legacy OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
42: test_blast_read_tabular_with_comments_constexpr OK
42: test_blast_read_tabular_with_comments_customfields_constexpr OK
42: test_blast_read_tabular_with_comments_legacy_constexpr OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
42: **************************************
42:  Total Tests: 35
42:  Skipped:     0
42:  Errors:      0
42: **************************************
1: test_alignment_algorithms_align_gaps_global_affine OK
 57/414 Test  #42: test_blast ........................................................................   Passed    0.33 sec
test 69
        Start  69: test_test_index_vstree

69: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_vstree
69: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
69: Test timeout computed to be: 10000000
1: test_alignment_algorithms_gaps_gaps_global_affine OK
1: test_alignment_algorithms_graph_gaps_global_affine OK
1: test_alignment_algorithms_fragments_gaps_global_affine OK
1: test_align_global_alignment_shorter_interfaces_affine OK
1: test_alignment_algorithms_score_global_affine OK
1: test_alignment_algorithms_align_gaps_overlap_linear OK
1: test_alignment_algorithms_gaps_gaps_overlap_linear OK
1: test_alignment_algorithms_graph_gaps_overlap_linear OK
1: test_alignment_algorithms_fragments_gaps_overlap_linear OK
1: test_alignment_algorithms_score_overlap_linear OK
1: test_alignment_algorithms_align_gaps_overlap_affine OK
1: test_alignment_algorithms_gaps_gaps_overlap_affine OK
1: test_alignment_algorithms_graph_gaps_overlap_affine OK
1: test_alignment_algorithms_fragments_gaps_overlap_affine OK
1: test_alignment_algorithms_score_overlap_affine OK
1: test_alignment_algorithms_align_gaps_semi_global_linear OK
1: test_alignment_algorithms_gaps_gaps_semi_global_linear OK
1: test_alignment_algorithms_graph_gaps_semi_global_linear OK
1: test_alignment_algorithms_fragments_gaps_semi_global_linear OK
1: test_alignment_algorithms_score_semi_global_linear OK
1: test_alignment_algorithms_align_gaps_semi_global_affine OK
1: test_alignment_algorithms_gaps_gaps_semi_global_affine OK
1: test_alignment_algorithms_graph_gaps_semi_global_affine OK
1: test_alignment_algorithms_fragments_gaps_semi_global_affine OK
1: test_alignment_algorithms_score_semi_global_affine OK
1: test_alignment_algorithms_global_different_container OK
1: test_alignment_algorithms_align_local_linear OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
69: TEST SUITE tests
69: SEQAN_ENABLE_DEBUG == 1
69: SEQAN_ENABLE_TESTING == 1
69: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
69: SEQAN_ASYNC_IO == 1
69: TopDownIndexIteratorTest_Constructor type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > > OK
69: TopDownIndexIteratorTest_Constructor type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
69: TopDownIndexIteratorTest_Constructor type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
69: TopDownIndexIteratorTest_Constructor type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
69: TopDownIndexIteratorTest_Constructor type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<bool, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
4: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
46: test_store_io_write_record_context_gtf OK
46: test_store_io_gff_stream_read_record_gff OK
46: test_store_io_gff_stream_read_record_gtf OK
46: test_store_io_gff_stream_write_record_gff OK
46: test_store_io_gff_stream_write_record_gtf OK
46: test_gff_io_isOpen_fileIn OK
46: test_gff_io_isOpen_fileOut OK
46: **************************************
46:  Total Tests: 12
46:  Skipped:     0
46:  Errors:      0
46: **************************************
 58/414 Test  #46: test_test_gff_io ..................................................................   Passed    0.29 sec
test 70
        Start  70: test_test_index_view

70: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_view
70: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
70: Test timeout computed to be: 10000000
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
1: test_alignment_algorithms_gaps_local_linear OK
1: test_alignment_algorithms_graph_local_linear OK
70: TEST SUITE test_index_view
70: SEQAN_ENABLE_DEBUG == 1
70: SEQAN_ENABLE_TESTING == 1
70: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
70: SEQAN_ASYNC_IO == 1
70: test_index_view_basic OK
70: **************************************
70:  Total Tests: 1
70:  Skipped:     0
70:  Errors:      0
70: **************************************
 59/414 Test  #70: test_test_index_view ..............................................................   Passed    0.01 sec
test 71
        Start  71: test_test_index_finder

71: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_finder
71: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
71: Test timeout computed to be: 10000000
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
71: TEST SUITE tests
71: SEQAN_ENABLE_DEBUG == 1
71: SEQAN_ENABLE_TESTING == 1
71: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
71: SEQAN_ASYNC_IO == 1
71: IndexFinderTest_FindFirstChar type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::IndexSa<void> > OK
71: IndexFinderTest_FindFirstChar type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::IndexEsa<void> > OK
71: IndexFinderTest_FindFirstChar type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_FindFirstChar type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_FindFirstChar type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_FindFirstChar type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
27: test_bam_io_bam_file_bam_write_header OK
4: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
1: test_alignment_algorithms_fragments_local_linear OK
1: test_alignment_algorithms_align_local_affine OK
1: test_alignment_algorithms_gaps_local_affine OK
1: test_alignment_algorithms_graph_local_affine OK
1: test_alignment_algorithms_fragments_local_affine OK
1: test_alignment_algorithms_global_dynamic_cost OK
1: test_alignment_algorithms_local_dynamic_cost OK
64: RankDictionaryTest_GetRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
3: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Linear_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
27: test_bam_io_bam_file_bam_write_records OK
68: BidirectionalFMIndexTest_SearchInString type parameter seqan::Index<seqan::String<bool, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexConfigLevelsPrefix<void, unsigned long> > > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 1u, 1u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
1: test_align_local_alignment_enumeration_align OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 2u, 2u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<bool, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::Levels<void, seqan::LevelsPrefixRDConfig<unsigned int, seqan::Alloc<void>, 3u, 3u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<bool, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
1: test_align_local_alignment_enumeration_gaps OK
1: test_align_local_alignment_enumeration_fragment OK
1: test_alignment_algorithms_align_global_linear_banded OK
1: test_alignment_algorithms_gaps_global_linear_banded OK
1: test_alignment_algorithms_graph_global_linear_banded OK
1: test_alignment_algorithms_fragments_global_linear_banded OK
1: test_alignment_algorithms_align_global_affine_banded OK
1: test_alignment_algorithms_gaps_global_affine_banded OK
1: test_alignment_algorithms_graph_global_affine_banded OK
1: test_alignment_algorithms_fragments_global_affine_banded OK
1: test_alignment_algorithms_align_overlap_linear_banded OK
1: test_alignment_algorithms_gaps_overlap_linear_banded OK
1: test_alignment_algorithms_graph_overlap_linear_banded OK
1: test_alignment_algorithms_fragments_overlap_linear_banded OK
1: test_alignment_algorithms_align_overlap_affine_banded OK
1: test_alignment_algorithms_gaps_overlap_affine_banded OK
1: test_alignment_algorithms_graph_overlap_affine_banded OK
1: test_alignment_algorithms_fragments_overlap_affine_banded OK
1: test_alignment_algorithms_align_semi_global_linear_banded OK
1: test_alignment_algorithms_gaps_semi_global_linear_banded OK
1: test_alignment_algorithms_graph_semi_global_linear_banded OK
1: test_alignment_algorithms_fragments_semi_global_linear_banded OK
1: test_alignment_algorithms_align_semi_global_affine_banded OK
1: test_alignment_algorithms_gaps_semi_global_affine_banded OK
1: test_alignment_algorithms_graph_semi_global_affine_banded OK
1: test_alignment_algorithms_fragments_semi_global_affine_banded OK
1: test_align_global_alignment_banded_shorter_interfaces_linear OK
1: test_align_global_alignment_banded_shorter_interfaces_affine OK
1: test_alignment_algorithms_global_banded_different_container OK
1: test_alignment_algorithms_align_local_linear_banded OK
1: test_alignment_algorithms_gaps_local_linear_banded OK
1: test_alignment_algorithms_graph_local_linear_banded OK
1: test_alignment_algorithms_fragments_local_linear_banded OK
1: test_alignment_algorithms_align_local_affine_banded OK
1: test_alignment_algorithms_gaps_local_affine_banded OK
1: test_alignment_algorithms_graph_local_affine_banded OK
1: test_alignment_algorithms_fragments_local_affine_banded OK
1: test_alignment_algorithms_global_dynamic_cost_banded OK
1: test_alignment_algorithms_local_dynamic_cost_banded OK
1: test_align_local_alignment_enumeration_banded_align OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
66: IndexTest_IndexCreate type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
1: test_align_local_alignment_enumeration_banded_gaps OK
1: test_align_local_alignment_enumeration_banded_fragment OK
1: test_align_global_alignment_hirschberg_align OK
1: test_align_global_alignment_hirschberg_gaps OK
1: test_align_global_alignment_hirschberg_fragments OK
1: test_align_global_alignment_hirschberg_graph OK
1: test_align_global_alignment_myers_hirschberg_align OK
1: test_align_global_alignment_myers_hirschberg_gaps OK
1: test_align_global_alignment_myers_hirschberg_fragments OK
1: test_align_global_alignment_myers_hirschberg_graph OK
1: test_align_global_alignment_score_hirschberg OK
1: test_align_global_alignment_score_myers OK
1: test_align_global_alignment_score_myers_hirschberg OK
1: test_align_global_alignment_hirschberg_single_character OK
1: test_align_integrate_align OK
1: test_align_integrate_align_infix_of_infix OK
1: test_align_stream_gaps_write OK
1: test_align_stream_gaps_stream OK
1: test_align_stream_align_write OK
1: test_align_stream_align_stream OK
1: test_align_compute_alignment_stats OK
1: **************************************
1:  Total Tests: 387
1:  Skipped:     0
1:  Errors:      0
1: **************************************
 60/414 Test   #1: test_test_align ...................................................................   Passed    1.14 sec
test 72
        Start  72: test_test_find_backtracking

72: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_find_backtracking
72: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
72: Test timeout computed to be: 10000000
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::Dna5Q_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::ReducedAminoAcid_<seqan::Tag<seqan::Murphy10_> > >, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
68: BidirectionalFMIndexTest_SearchInString type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexConfigLevelsPrefix<void, unsigned long> > > > OK
72: TEST SUITE test_find_backtracking_exp
72: SEQAN_ENABLE_DEBUG == 1
72: SEQAN_ENABLE_TESTING == 1
72: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
72: SEQAN_ASYNC_IO == 1
72: test_find_backtracking_multiple_hamming_banana_vs_ada_ana OK
72: test_find_backtracking_multiple_edit_banana_vs_ada_ana OK
72: **************************************
72:  Total Tests: 2
72:  Skipped:     0
72:  Errors:      0
72: **************************************
 61/414 Test  #72: test_test_find_backtracking .......................................................   Passed    0.02 sec
test 73
        Start  73: test_test_index_repeats

73: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_index_repeats
73: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/index
73: Test timeout computed to be: 10000000
64: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan::RankDictionary<seqan::SimpleType<unsigned char, seqan::AminoAcid_>, seqan::WaveletTree<void, seqan::WTRDConfig<unsigned long, seqan::Alloc<void>, 1u, 0u> > > OK
64: **************************************
64:  Total Tests: 239
64:  Skipped:     0
64:  Errors:      0
64: **************************************
73: TEST SUITE test_index_repeats
73: SEQAN_ENABLE_DEBUG == 1
73: SEQAN_ENABLE_TESTING == 1
73: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
73: SEQAN_ASYNC_IO == 1
73: test_index_repeats_period_1_ignore_minlen_for_ns OK
 62/414 Test  #64: test_test_index_fm_rank_dictionary ................................................   Passed    0.32 sec
test 74
        Start  74: test_test_journaled_set

74: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_journaled_set
74: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_set
74: Test timeout computed to be: 10000000
74: TEST SUITE test_journaled_set
74: SEQAN_ENABLE_DEBUG == 1
74: SEQAN_ENABLE_TESTING == 1
74: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
74: SEQAN_ASYNC_IO == 1
74: test_journaled_set_constructor OK
74: test_journaled_set_assign OK
74: test_journaled_set_set_host OK
74: test_journaled_set_host OK
74: test_journaled_set_assign_value OK
74: test_journaled_set_append_value OK
74: test_journaled_set_value OK
74: test_journaled_set_clear OK
74: test_journaled_set_resize OK
74: test_journaled_set_empty OK
74: test_journaled_set_iterator OK
74: **************************************
74:  Total Tests: 11
74:  Skipped:     0
74:  Errors:      0
74: **************************************
67: LFTest_IsSentinel type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, WTFMIndexConfig<void, unsigned long> > > OK
 63/414 Test  #74: test_test_journaled_set ...........................................................   Passed    0.03 sec
test 75
        Start  75: test_test_journaled_string_tree

75: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_journaled_string_tree
75: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree
75: Test timeout computed to be: 10000000
3: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
75: TEST SUITE test_journaled_string_tree
75: SEQAN_ENABLE_DEBUG == 1
75: SEQAN_ENABLE_TESTING == 1
75: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
75: SEQAN_ASYNC_IO == 1
75: test_journaled_string_tree_constructor OK
75: test_journaled_string_tree_length OK
75: test_journaled_string_tree_set_host OK
75: test_journaled_string_tree_host OK
75: test_journaled_string_tree_insert OK
75: test_journaled_string_tree_erase OK
75: test_journaled_string_tree_clear OK
75: test_journaled_string_tree_empty OK
75: test_journaled_string_tree_resize OK
75: test_journaled_string_tree_max_size OK
75: test_journaled_string_tree_size OK
75: **************************************
75:  Total Tests: 11
75:  Skipped:     0
75:  Errors:      0
75: **************************************
 64/414 Test  #75: test_test_journaled_string_tree ...................................................   Passed    0.01 sec
test 76
        Start  76: test_test_delta_map

76: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_delta_map
76: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree
76: Test timeout computed to be: 10000000
76: TEST SUITE test_delta_map
76: SEQAN_ENABLE_DEBUG == 1
76: SEQAN_ENABLE_TESTING == 1
76: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
76: SEQAN_ASYNC_IO == 1
76: test_delta_map_delta_store_is_delta_type OK
76: test_delta_map_delta_store_select_delta_type OK
76: test_delta_map_delta_store_get_delta_store OK
76: test_delta_map_delta_store_add_delta_value OK
76: test_delta_map_delta_store_erase_delta_value OK
76: test_delta_map_delta_store_delta_value OK
76: test_delta_map_delta_store_clear OK
76: test_delta_map_delta_store_deletion_size OK
76: test_delta_map_delta_store_insertion_size OK
76: test_delta_map_delta_store_net_size OK
76: test_delta_map_insert OK
76: test_delta_map_erase OK
76: test_delta_map_lower_bound OK
76: test_delta_map_upper_bound OK
76: test_delta_map_count OK
76: test_delta_map_equal_range OK
76: test_delta_map_find OK
76: test_delta_map_size OK
76: test_delta_map_empty OK
76: test_delta_map_iterator OK
76: test_delta_map_iterator_copy_constructor OK
76: test_delta_map_iterator_assign OK
76: test_delta_map_iterator_value OK
76: test_delta_map_iterator_delta_value OK
76: test_delta_map_entry_delta_coverage OK
76: test_delta_map_entry_delta_type OK
76: test_delta_map_entry_delta_position OK
76: **************************************
76:  Total Tests: 27
76:  Skipped:     0
76:  Errors:      0
76: **************************************
 65/414 Test  #76: test_test_delta_map ...............................................................   Passed    0.01 sec
test 77
        Start  77: test_journaled_string_tree_traverser

77: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_journaled_string_tree_traverser
77: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree
77: Test timeout computed to be: 10000000
77: TEST SUITE test_journaled_string_tree_traverser
77: SEQAN_ENABLE_DEBUG == 1
77: SEQAN_ENABLE_TESTING == 1
77: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
77: SEQAN_ASYNC_IO == 1
77: test_journaled_string_tree_traverser_constructor OK
77: test_journaled_string_tree_traverser_traverser OK
4: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
69: TopDownIndexIteratorTest_Constructor type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
4: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
73: test_index_repeats_period_1_no_ns OK
4: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
68: BidirectionalFMIndexTest_SearchInString type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexConfigLevelsPrefix<void, unsigned long> > > > OK
66: IndexTest_IndexCreate type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_Length type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > > OK
66: IndexTest_Length type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_Length type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_Length type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_Length type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_Length type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_Length type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_ClearEmpty type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > > OK
66: IndexTest_ClearEmpty type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_ClearEmpty type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_ClearEmpty type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_ClearEmpty type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
4: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
73: test_index_repeats_period_1_many_ns OK
73: **************************************
73:  Total Tests: 3
73:  Skipped:     0
73:  Errors:      0
73: **************************************
3: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
77: test_journaled_string_tree_traverser_init OK
77: test_journaled_string_tree_traverser_context_size OK
77: test_journaled_string_tree_traverser_branch_size OK
 66/414 Test  #73: test_test_index_repeats ...........................................................   Passed    0.33 sec
test 78
        Start  78: test_journaled_string_tree_find

78: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_journaled_string_tree_find
78: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/journaled_string_tree
78: Test timeout computed to be: 10000000
71: IndexFinderTest_FindFirstChar type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
67: LFTest_IsSentinel type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<void, unsigned long> > > OK
3: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
77: test_journaled_string_tree_traverser_at_end OK
78: TEST SUITE test_journaled_string_tree_find
78: SEQAN_ENABLE_DEBUG == 1
78: SEQAN_ENABLE_TESTING == 1
78: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
78: SEQAN_ASYNC_IO == 1
3: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Linear_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
77: test_journaled_string_tree_traverser_is_base OK
3: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Affine_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
66: IndexTest_ClearEmpty type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
77: test_journaled_string_tree_traverser_advance OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix_Align type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
69: TopDownIndexIteratorTest_Constructor type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
69: TopDownIndexIteratorTest_GoDown type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > > OK
69: TopDownIndexIteratorTest_GoDown type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
69: TopDownIndexIteratorTest_GoDown type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
69: TopDownIndexIteratorTest_GoDown type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
69: TopDownIndexIteratorTest_GoDown type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
4: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
77: test_journaled_string_tree_traverser_context_iterator OK
77: test_journaled_string_tree_traverser_container OK
3: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
4: **************************************
4:  Total Tests: 48
4:  Skipped:     0
4:  Errors:      0
4: **************************************
 67/414 Test   #4: test_test_align_simd_global_equal_length_avx2_host ................................   Passed    1.76 sec
test 79
        Start  79: test_test_map

79: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_map
79: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/map
79: Test timeout computed to be: 10000000
3: SimdAlignTestCommon_Affine_Score type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOff_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, false, false, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, true, true, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<true, false, false, true, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: SimdAlignTestCommon_Dynamic_Score_Matrix type parameter std::tuple<seqan::AlignConfig<false, true, true, false, seqan::Tag<seqan::Default_> >, seqan::Tag<impl::test_align_mock::TestAlignSimdEqualLength_>, seqan::Tag<seqan::BandOn_> > OK
3: **************************************
3:  Total Tests: 48
3:  Skipped:     0
3:  Errors:      0
3: **************************************
68: BidirectionalFMIndexTest_SearchInString type parameter seqan::Index<seqan::String<bool, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<void, unsigned long> > > > OK
79: TEST SUITE test_map
79: SEQAN_ENABLE_DEBUG == 1
79: SEQAN_ENABLE_TESTING == 1
79: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
79: SEQAN_ASYNC_IO == 1
 68/414 Test   #3: test_test_align_simd_global_equal_length_sse4_host ................................   Passed    1.80 sec
test 80
        Start  80: test_test_misc

80: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_misc
80: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/misc
80: Test timeout computed to be: 10000000
77: test_journaled_string_tree_traverser_basic_traversal OK
77: **************************************
77:  Total Tests: 11
77:  Skipped:     0
77:  Errors:      0
77: **************************************
80: TEST SUITE test_misc
80: SEQAN_ENABLE_DEBUG == 1
80: SEQAN_ENABLE_TESTING == 1
80: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
80: SEQAN_ASYNC_IO == 1
80: test_misc_terminal_get_terminal_size OK
80: test_misc_bit_twiddling_pop_count_char OK
80: test_misc_bit_twiddling_pop_count_signed_char OK
80: test_misc_bit_twiddling_pop_count_unsigned_char OK
80: test_misc_bit_twiddling_pop_count_short OK
80: test_misc_bit_twiddling_pop_count_signed_short OK
80: test_misc_bit_twiddling_pop_count_unsigned_short OK
80: test_misc_bit_twiddling_pop_count_int OK
80: test_misc_bit_twiddling_pop_count_signed_int OK
80: test_misc_bit_twiddling_pop_count_unsigned_int OK
80: test_misc_bit_twiddling_pop_count_long OK
80: test_misc_bit_twiddling_pop_count_signed_long OK
80: test_misc_bit_twiddling_pop_count_unsigned_long OK
80: test_misc_bit_twiddling_pop_count_long_long OK
80: test_misc_bit_twiddling_pop_count_signed_long_long OK
80: test_misc_bit_twiddling_pop_count_unsigned_long_long OK
80: test_misc_bit_twiddling_pop_count_int8 OK
80: test_misc_bit_twiddling_pop_count_uint8 OK
80: test_misc_bit_twiddling_pop_count_int16 OK
80: test_misc_bit_twiddling_pop_count_uint16 OK
80: test_misc_bit_twiddling_pop_count_int32 OK
80: test_misc_bit_twiddling_pop_count_uint32 OK
80: test_misc_bit_twiddling_pop_count_int64 OK
80: test_misc_bit_twiddling_pop_count_uint64 OK
80: Interval_Tree__IntervalTreeTest_QueryAtBoundary OK
80: Interval_Tree__IntervalTreeTest_IntervalTree__int OK
80: Interval_Tree__IntervalTreeTest_IntervalTreeFromIterator__int OK
80: Interval_Tree__IntervalTreeTest_NonFullLength__int OK
80: Interval_Tree__IntervalTreeTest_AddInterval__int OK
80: Interval_Tree__IntervalTreeTest_TreeStructure__int OK
80: Interval_Tree__IntervalTreeTest_FindIntervalExcludeTouching__int OK
80: Interval_Tree__IntervalTreeTest_FindNoInterval__int OK
80: Interval_Tree__IntervalTreeTest_GraphMap__int_ComputeCenter_StoreIntervals OK
80: Interval_Tree__IntervalTreeTest_FindIntervalsIntervals__int_ComputeCenter OK
80: test_misc_accumulators_average_accumulator_int_average OK
80: test_misc_accumulators_average_accumulator_int_count OK
80: test_misc_accumulators_average_accumulator_int_sum OK
80: test_misc_accumulators_average_accumulator_int_clear OK
80: test_misc_accumulators_average_accumulator_double_average OK
80: test_misc_accumulators_average_accumulator_double_count OK
80: test_misc_accumulators_average_accumulator_double_sum OK
80: test_misc_accumulators_average_accumulator_double_clear OK
80: test_misc_edit_environment_string_enumerator_hamming OK
80: test_misc_edit_environment_string_enumerator_iterator_hamming OK
80: test_misc_edit_environment_string_enumerator_edit OK
80: test_misc_edit_environment_string_enumerator_iterator_edit OK
80: **************************************
80:  Total Tests: 46
80:  Skipped:     0
80:  Errors:      0
80: **************************************
 69/414 Test  #77: test_journaled_string_tree_traverser ..............................................   Passed    0.60 sec
 70/414 Test  #80: test_test_misc ....................................................................   Passed    0.03 sec
test 81
        Start  81: test_test_modifier

81: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_modifier
81: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier
81: Test timeout computed to be: 10000000
test 82
        Start  82: test_test_modifier_cyclic_shape

82: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_modifier_cyclic_shape
82: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/modifier_cyclic_shape
82: Test timeout computed to be: 10000000
81: TEST SUITE test_modifier
81: SEQAN_ENABLE_DEBUG == 1
81: SEQAN_ENABLE_TESTING == 1
81: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
81: SEQAN_ASYNC_IO == 1
81: test_modifer_shortcuts_dna_string_reverse OK
81: test_modifer_shortcuts_dna5_string_reverse OK
81: test_modifer_shortcuts_rna_string_reverse OK
81: test_modifer_shortcuts_rna5_string_reverse OK
81: test_modifer_shortcuts_dna_string_complement OK
81: test_modifer_shortcuts_dna5_string_complement OK
81: test_modifer_shortcuts_rna_string_complement OK
81: test_modifer_shortcuts_rna5_string_complement OK
81: test_modifer_shortcuts_dna_string_reverse_complement OK
81: test_modifer_shortcuts_dna5_string_reverse_complement OK
81: test_modifer_shortcuts_rna_string_reverse_complement OK
81: test_modifer_shortcuts_rna5_string_reverse_complement OK
81: test_modifer_shortcuts_complement_in_place_string OK
81: test_modifer_shortcuts_complement_in_place_string_set OK
81: test_modifer_shortcuts_reverse_complement_in_place_string OK
81: test_modifer_shortcuts_reverse_complement_in_place_string_set OK
81: test_modifer_shortcuts_reverse_in_place_string OK
82: TEST SUITE test_modifier_cyclic_shape
82: SEQAN_ENABLE_DEBUG == 1
82: SEQAN_ENABLE_TESTING == 1
82: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
82: SEQAN_ASYNC_IO == 1
82: test_modifier_cyclic_shape_cyclic_shape OK
82: test_modifier_cyclic_shape_iterator_generic_alloc_charstring OK
82: test_modifier_cyclic_shape_iterator_generic_mod_charstring OK
82: test_modifier_cyclic_shape_iterator_generic_infix_charstring OK
82: test_modifier_cyclic_shape_iterator_fixed_alloc_charstring OK
82: test_modifier_cyclic_shape_iterator_fixed_mod_charstring OK
82: test_modifier_cyclic_shape_iterator_fixed_infix_charstring OK
82: test_modifier_cyclic_shape_modified_string_construct OK
82: test_modifier_cyclic_shape_modified_string_functions OK
82: test_modifier_cyclic_shape_modified_iterator OK
82: **************************************
82:  Total Tests: 10
82:  Skipped:     0
82:  Errors:      0
82: **************************************
 71/414 Test  #82: test_test_modifier_cyclic_shape ...................................................   Passed    0.02 sec
test 83
        Start  83: test_test_multiple_translation_units

83: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_multiple_translation_units
83: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/multiple_translation_units
83: Test timeout computed to be: 10000000
83: TEST SUITE test_multiple_translation_units
83: SEQAN_ENABLE_DEBUG == 1
83: SEQAN_ENABLE_TESTING == 1
83: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
83: SEQAN_ASYNC_IO == 1
83: **************************************
83:  Total Tests: 0
83:  Skipped:     0
83:  Errors:      0
83: **************************************
 72/414 Test  #83: test_test_multiple_translation_units ..............................................   Passed    0.01 sec
test 84
        Start  84: test_test_parallel

84: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_parallel
84: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parallel
84: Test timeout computed to be: 10000000
84: TEST SUITE test_parallel
84: SEQAN_ENABLE_DEBUG == 1
84: SEQAN_ENABLE_TESTING == 1
84: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
84: SEQAN_ASYNC_IO == 1
84: PARALLELISM ENABLED (CTEST_FULL_OUTPUT)
66: IndexTest_ClearEmpty type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_OpenSave type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > > OK
66: IndexTest_OpenSave type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_OpenSave type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_OpenSave type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: IndexTest_OpenSave type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
61: testBWTWalk OK
61: **************************************
61:  Total Tests: 1
61:  Skipped:     0
61:  Errors:      0
61: **************************************
 73/414 Test  #61: test_test_index_sa_bwtwalk ........................................................   Passed    1.08 sec
test 85
        Start  85: test_test_parse_lm

85: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_parse_lm
85: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/parse_lm
85: Test timeout computed to be: 10000000
81: test_modifer_shortcuts_reverse_in_place_string_set OK
81: test_modifier_reverse_iterator_metafunctions OK
81: test_modifer_shortcuts_to_lower_in_place_string OK
81: test_modifer_shortcuts_to_lower_in_place_string_set OK
81: test_modifer_shortcuts_to_upper_in_place_string OK
81: test_modifer_shortcuts_to_upper_in_place_string_set OK
81: test_modifier_functors_functor_upcase OK
81: test_modifier_functors_functor_lowcase OK
81: test_modifier_functors_dna_complement OK
81: test_modifier_alphabet_size_metafunctions OK
81: test_modifier_DnaQ OK
81: test_modifier_alphabet_enumerate OK
81: test_modifier_alphabet_convert OK
81: test_modifier_alphabet_ord_value OK
81: test_modifier_view_iterator_metafunctions OK
81: test_modifier_view_iterator OK
81: test_modifier_view_string_caesar_chiffre OK
81: test_modifier_view_string_upper_case OK
81: test_modifier_view_string_low_case OK
81: test_modifier_view_string_alphabet_conversion OK
81: test_modifier_view_string_nested_modifier OK
81: test_modifier_convert_in_place OK
81: test_modifier_modified_string_metafunctions OK
81: test_modifier_modified_string_construct OK
81: test_modifier_modified_string_assignment OK
81: test_modifier_modified_string_length OK
81: test_modifier_modified_string_cascade OK
81: test_modifier_modified_iterator_construct OK
81: test_modifier_modified_string_mod_view OK
81: test_modifier_modified_string_mod_view_segment OK
81: test_modifier_modified_string_mod_pos OK
81: test_modifier_modified_string_const_literal OK
81: test_modifier_modified_string_reverse_segment OK
81: test_modifier_minimal OK
81: test_modifier_reverse_back_front OK
81: test_modified_string_padding_construction OK
81: test_modified_string_padding_expand OK
81: test_modified_string_padding_length OK
81: test_modified_string_padding_begin OK
81: test_modified_string_padding_end OK
81: test_modified_string_padding_difference OK
81: test_modified_string_padding_iterator OK
81: test_modified_string_padding_defect_2190 OK
81: **************************************
81:  Total Tests: 60
81:  Skipped:     0
81:  Errors:      0
81: **************************************
67: LFTest_IsSentinel type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, SmallLVFMIndexConfig<void, unsigned long> > > OK
67: LFTest_IsSentinel type parameter seqan::Index<seqan::String<bool, seqan::Alloc<void> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
67: LFTest_IsSentinel type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
67: LFTest_IsSentinel type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
85: TEST SUITE test_parse_lm
85: SEQAN_ENABLE_DEBUG == 1
85: SEQAN_ENABLE_TESTING == 1
85: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
85: SEQAN_ASYNC_IO == 1
85: test_parse_lm_local_match_constructor OK
85: test_parse_lm_local_match_store_constructor OK
85: test_parse_lm_local_match_store_append_local_match OK
85: test_parse_lm_parse_lastz_general OK
85: test_parse_lm_parse_blastn_tabular OK
85: test_parse_lm_parse_stellar_gff OK
85: **************************************
85:  Total Tests: 6
85:  Skipped:     0
85:  Errors:      0
85: **************************************
 74/414 Test  #81: test_test_modifier ................................................................   Passed    0.13 sec
 75/414 Test  #85: test_test_parse_lm ................................................................   Passed    0.03 sec
test 86
        Start  86: test_test_pipe

86: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_pipe
86: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/pipe
86: Test timeout computed to be: 10000000
test 87
        Start  87: test_test_platform

87: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_platform
87: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/platform
87: Test timeout computed to be: 10000000
69: TopDownIndexIteratorTest_GoDown type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
86: TEST SUITE test_pipe
86: SEQAN_ENABLE_DEBUG == 1
86: SEQAN_ENABLE_TESTING == 1
86: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
86: SEQAN_ASYNC_IO == 1
87: TEST SUITE test_platform
87: SEQAN_ENABLE_DEBUG == 1
87: SEQAN_ENABLE_TESTING == 1
87: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
87: SEQAN_ASYNC_IO == 1
87: test_platform_range_based_for_loops1 OK
87: test_platform_range_based_for_loops2 OK
87: **************************************
87:  Total Tests: 2
87:  Skipped:     0
87:  Errors:      0
87: **************************************
 76/414 Test  #87: test_test_platform ................................................................   Passed    0.04 sec
test 88
        Start  88: test_test_random

88: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_random
88: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/random
88: Test timeout computed to be: 10000000
88: TEST SUITE test_random
88: SEQAN_ENABLE_DEBUG == 1
88: SEQAN_ENABLE_TESTING == 1
88: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
88: SEQAN_ASYNC_IO == 1
88: test_default_rng OK
88: test_random_beta_constructors OK
88: test_random_beta_alpha OK
88: test_random_beta_beta OK
88: test_random_beta_min OK
88: test_random_beta_max OK
88: test_random_beta_param OK
88: test_random_beta_set_param OK
88: test_random_beta_write OK
88: test_random_beta_read OK
88: test_random_beta_functor OK
88: test_random_shuffle OK
88: test_random_cvt_beta_param OK
88: test_random_cvt_lognormal_param OK
88: **************************************
88:  Total Tests: 14
88:  Skipped:     0
88:  Errors:      0
88: **************************************
 77/414 Test  #88: test_test_random ..................................................................   Passed    0.05 sec
test 89
        Start  89: test_test_realign

89: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_realign
89: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/realign
89: Test timeout computed to be: 10000000
89: TEST SUITE test_realign
89: SEQAN_ENABLE_DEBUG == 1
89: SEQAN_ENABLE_TESTING == 1
89: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
89: SEQAN_ASYNC_IO == 1
89: test_realign_one_read_no_gaps OK
89: test_realign_one_read_with_gaps OK
89: test_realign_two_reads_stacked_at_beginning OK
68: BidirectionalFMIndexTest_SearchInString type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<void, unsigned long> > > > OK
89: test_realign_simple_case OK
55: testIndexCreation OK
55: **************************************
55:  Total Tests: 6
55:  Skipped:     0
55:  Errors:      0
55: **************************************
89: test_realign_simple_gaps OK
84: test_parallel_atomic_inc OK
86: test_pipe_test_external_string OK
 78/414 Test  #55: test_test_index_creation ..........................................................   Passed    1.48 sec
test 90
        Start  90: test_reduced_aminoacid

90: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_reduced_aminoacid
90: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/reduced_aminoacid
90: Test timeout computed to be: 10000000
69: TopDownIndexIteratorTest_GoDown type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
69: **************************************
69:  Total Tests: 14
69:  Skipped:     0
69:  Errors:      0
69: **************************************
71: IndexFinderTest_FindFirstChar type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_DefaultFinder type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::IndexSa<void> > OK
71: IndexFinderTest_DefaultFinder type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::IndexEsa<void> > OK
71: IndexFinderTest_DefaultFinder type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_DefaultFinder type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_DefaultFinder type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_DefaultFinder type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_DefaultFinder type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_DefaultFinder type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdString type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::IndexSa<void> > OK
71: IndexFinderTest_StdString type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::IndexEsa<void> > OK
71: IndexFinderTest_StdString type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdString type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdString type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdString type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdString type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdString type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdVector type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::IndexSa<void> > OK
71: IndexFinderTest_StdVector type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::IndexEsa<void> > OK
71: IndexFinderTest_StdVector type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdVector type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdVector type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdVector type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdVector type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: IndexFinderTest_StdVector type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
71: **************************************
71:  Total Tests: 32
71:  Skipped:     0
71:  Errors:      0
71: **************************************
86: test_pipe_test_simple_pool OK
86: test_pipe_test_mapper OK
86: test_pipe_test_mapper_partially_filled OK
89: test_realign_simple_insert OK
89: test_realign_simple_insert_window OK
89: test_realign_simple_insert_window_tight_left OK
89: test_realign_simple_insert_window_tight_right OK
89: test_realign_tricky_insert_window_cuts OK
89: **************************************
89:  Total Tests: 10
89:  Skipped:     0
89:  Errors:      0
89: **************************************
84: test_parallel_atomic_dec OK
67: LFTest_IsSentinel type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
67: CSATest_IndexSA type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, WTFMIndexConfig<void, unsigned long> > > OK
67: CSATest_IndexSA type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, WTFMIndexConfig<void, unsigned long> > > OK
66: IndexTest_OpenSave type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
 79/414 Test  #69: test_test_index_vstree ............................................................   Passed    1.48 sec
 80/414 Test  #71: test_test_index_finder ............................................................   Passed    1.44 sec
 81/414 Test  #89: test_test_realign .................................................................   Passed    0.39 sec
test 91
        Start  91: test_test_rna_io

91: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_rna_io
91: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/rna_io
91: Test timeout computed to be: 10000000
test 92
        Start  92: test_test_roi_io

92: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_roi_io
92: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/roi_io
92: Test timeout computed to be: 10000000
test 93
        Start  93: test_test_score

93: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_score
93: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/score
93: Test timeout computed to be: 10000000
90: TEST SUITE test_reduced_aminoacid
90: SEQAN_ENABLE_DEBUG == 1
90: SEQAN_ENABLE_TESTING == 1
90: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
90: SEQAN_ASYNC_IO == 1
90: test_reduced_aminoacid_buchfink11 OK
90: test_reduced_aminoacid_cannata10 OK
90: test_reduced_aminoacid_li10 OK
90: test_reduced_aminoacid_solis10 OK
90: test_reduced_aminoacid_murphy5 OK
90: test_reduced_aminoacid_murphy10 OK
90: test_reduced_aminoacid_murphy10_moditerators OK
79: ....................................................................................................
79: test_map_map OK
79: **************************************
79:  Total Tests: 1
79:  Skipped:     0
79:  Errors:      0
79: **************************************
68: BidirectionalFMIndexTest_SearchInString type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<void, unsigned long> > > > OK
91: TEST SUITE test_rna_io
91: SEQAN_ENABLE_DEBUG == 1
91: SEQAN_ENABLE_TESTING == 1
91: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
91: SEQAN_ASYNC_IO == 1
91: test_rna_io_read_connect OK
91: test_rna_io_read_dot_bracket OK
91: test_rna_io_read_vienna OK
91: test_rna_io_read_stockholm OK
91: test_rna_io_read_bpseq OK
91: test_rna_io_read_ebpseq OK
91: test_rna_io_write_connect OK
91: test_rna_io_write_dot_bracket OK
91: test_rna_io_write_vienna OK
91: test_rna_io_write_stockholm OK
91: test_rna_io_write_bpseq OK
91: test_rna_io_write_ebpseq OK
91: test_rna_io_convert OK
91: **************************************
91:  Total Tests: 13
91:  Skipped:     0
91:  Errors:      0
91: **************************************
92: TEST SUITE test_roi_io
92: SEQAN_ENABLE_DEBUG == 1
92: SEQAN_ENABLE_TESTING == 1
92: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
92: SEQAN_ASYNC_IO == 1
92: test_roi_read_roi_record OK
92: test_roi_write_roi_record OK
92: test_roi_roi_file_read OK
92: test_roi_roi_file_write OK
92: test_roi_io_isOpen_fileIn OK
92: test_roi_io_isOpen_fileOut OK
92: **************************************
92:  Total Tests: 6
92:  Skipped:     0
92:  Errors:      0
92: **************************************
93: TEST SUITE test_score
93: SEQAN_ENABLE_DEBUG == 1
93: SEQAN_ENABLE_TESTING == 1
93: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
93: SEQAN_ASYNC_IO == 1
93: test_score_gap_open OK
93: test_score_simple OK
93: test_score_edit OK
93: test_score_matrix OK
93: test_score_matrix_file OK
 82/414 Test  #79: test_test_map .....................................................................   Passed    0.77 sec
 83/414 Test  #91: test_test_rna_io ..................................................................   Passed    0.08 sec
 84/414 Test  #92: test_test_roi_io ..................................................................   Passed    0.06 sec
test 94
        Start  94: test_test_seeds_combination

94: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_combination
94: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
94: Test timeout computed to be: 10000000
test 95
        Start  95: test_test_seeds_extension

95: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_extension
95: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
95: Test timeout computed to be: 10000000
test 96
        Start  96: test_test_seeds_global_chaining

96: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_global_chaining
96: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
96: Test timeout computed to be: 10000000
90: test_reduced_aminoacid_murphy10_modview_fmindex OK
90: **************************************
90:  Total Tests: 8
90:  Skipped:     0
90:  Errors:      0
90: **************************************
93: test_score_matrix_data OK
93: test_score_sequence_entry_for_score OK
93: test_score_dynamic_score_matrix OK
93: **************************************
93:  Total Tests: 8
93:  Skipped:     0
93:  Errors:      0
93: **************************************
84: test_parallel_atomic_add OK
94: TEST SUITE test_seeds_combination
94: SEQAN_ENABLE_DEBUG == 1
94: SEQAN_ENABLE_TESTING == 1
94: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
94: SEQAN_ASYNC_IO == 1
94: test_seeds_combination_seeds_combineable_merge_chained OK
94: test_seeds_combination_seeds_combineable_simple_chaining_chained OK
94: test_seeds_combination_seeds_combineable_simple_chaos_chaining_chained OK
94: test_seeds_combination_combine_seeds_merge_chained OK
94: test_seeds_combination_combine_seeds_simple_chaining_chained OK
94: test_seeds_combination_combine_seeds_simple_chaos_chaining_chained OK
94: **************************************
94:  Total Tests: 6
94:  Skipped:     0
94:  Errors:      0
94: **************************************
95: TEST SUITE test_seeds_extension
95: SEQAN_ENABLE_DEBUG == 1
95: SEQAN_ENABLE_TESTING == 1
95: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
95: SEQAN_ASYNC_IO == 1
95: test_seeds_extension_match_extension_simple OK
95: test_seeds_extension_ungapped_xdrop_extension_simple OK
95: test_seeds_extension_gapped_xdrop_extension_simple OK
95: test_seeds_extension_match_extension_chained OK
95: test_seeds_extension_ungapped_xdrop_extension_chained OK
95: **************************************
95:  Total Tests: 5
95:  Skipped:     0
95:  Errors:      0
95: **************************************
 85/414 Test  #90: test_reduced_aminoacid ............................................................   Passed    0.17 sec
 86/414 Test  #93: test_test_score ...................................................................   Passed    0.10 sec
 87/414 Test  #94: test_test_seeds_combination .......................................................   Passed    0.06 sec
 88/414 Test  #95: test_test_seeds_extension .........................................................   Passed    0.03 sec
test 97
        Start  97: test_test_seeds_seed_base

97: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_seed_base
97: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
97: Test timeout computed to be: 10000000
test 98
        Start  98: test_test_seeds_seed_chained

98: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_seed_chained
98: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
98: Test timeout computed to be: 10000000
test 99
        Start  99: test_test_seeds_seed_diagonal

99: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_seed_diagonal
99: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
99: Test timeout computed to be: 10000000
test 100
        Start 100: test_test_seeds_seed_set_base

100: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_seed_set_base
100: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
100: Test timeout computed to be: 10000000
96: TEST SUITE test_seeds_global_chaining
96: SEQAN_ENABLE_DEBUG == 1
96: SEQAN_ENABLE_TESTING == 1
96: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
96: SEQAN_ASYNC_IO == 1
96: test_seeds_global_chaining_sparse_length OK
96: **************************************
96:  Total Tests: 1
96:  Skipped:     0
96:  Errors:      0
96: **************************************
97: TEST SUITE test_seeds_seed_base
97: SEQAN_ENABLE_DEBUG == 1
97: SEQAN_ENABLE_TESTING == 1
97: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
97: SEQAN_ASYNC_IO == 1
97: test_seeds_seed_base_constructors_simple OK
97: test_seeds_seed_base_metafunctions_simple OK
97: test_seeds_seed_base_getters_setters_simple OK
97: test_seeds_seed_base_basic_functions_simple OK
97: test_seeds_seed_base_assign_simple OK
97: test_seeds_seed_base_constructors_chained OK
97: test_seeds_seed_base_metafunctions_chained OK
97: test_seeds_seed_base_getters_setters_chained OK
97: test_seeds_seed_base_basic_functions_chained OK
97: test_seeds_seed_base_assign_chained OK
97: **************************************
97:  Total Tests: 10
97:  Skipped:     0
97:  Errors:      0
97: **************************************
98: TEST SUITE test_seeds_seed_chained
98: SEQAN_ENABLE_DEBUG == 1
98: SEQAN_ENABLE_TESTING == 1
98: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
98: SEQAN_ASYNC_IO == 1
98: test_seeds_seed_chained_assign OK
98: test_seeds_seed_chained_metafunctions OK
98: test_seeds_seed_chained_append_diagonal OK
98: test_seeds_seed_chained_truncate_diagonals OK
98: test_seeds_seed_chained_iterators OK
98: test_seeds_seed_chained_front_back OK
98: **************************************
98:  Total Tests: 6
98:  Skipped:     0
98:  Errors:      0
98: **************************************
99: TEST SUITE test_seeds_seed_diagonal
99: SEQAN_ENABLE_DEBUG == 1
99: SEQAN_ENABLE_TESTING == 1
99: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
99: SEQAN_ASYNC_IO == 1
99: test_seeds_seed_diagonal_constructors OK
99: test_seeds_seed_diagonal_metafunctions OK
99: **************************************
99:  Total Tests: 2
99:  Skipped:     0
99:  Errors:      0
99: **************************************
 89/414 Test  #96: test_test_seeds_global_chaining ...................................................   Passed    0.05 sec
 90/414 Test  #97: test_test_seeds_seed_base .........................................................   Passed    0.04 sec
 91/414 Test  #98: test_test_seeds_seed_chained ......................................................   Passed    0.03 sec
 92/414 Test  #99: test_test_seeds_seed_diagonal .....................................................   Passed    0.01 sec
test 101
        Start 101: test_test_seeds_seed_set_unordered

101: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_seed_set_unordered
101: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
101: Test timeout computed to be: 10000000
test 102
        Start 102: test_test_seeds_align_banded_chain_impl

102: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_align_banded_chain_impl
102: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
102: Test timeout computed to be: 10000000
test 103
        Start 103: test_test_seeds_banded_chain_alignment_interface

103: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seeds_banded_chain_alignment_interface
103: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seeds
103: Test timeout computed to be: 10000000
test 104
        Start 104: test_test_seq_io

104: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_seq_io
104: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/seq_io
104: Test timeout computed to be: 10000000
100: TEST SUITE test_seeds_seed_set_base
100: SEQAN_ENABLE_DEBUG == 1
100: SEQAN_ENABLE_TESTING == 1
100: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
100: SEQAN_ASYNC_IO == 1
100: test_seeds_seed_set_base_container_functions_simple_unordered OK
100: test_seeds_seed_set_base_clear_simple OK
100: test_seeds_seed_set_base_clear_chained OK
100: test_seeds_seed_set_base_add_seed_single_threshold_reached_length_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_single_threshold_not_reached_length_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_single_threshold_reached_score_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_single_threshold_not_reached_score_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_no_threshold_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_right_merging_possible_no_threshold_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_impossible_no_threshold_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_not_reached_length_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_reached_length_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_not_reached_scored_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_reached_scored_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_no_threshold_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_simple_chain_right_chaining_possible_no_threshold_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_impossible_no_threshold_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_threshold_not_reached_length_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_threshold_reached_length_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_threshold_not_reached_scored_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_threshold_reached_scored_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_no_threshold_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_right_chaining_possible_no_threshold_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_impossible_no_threshold_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_not_reached_length_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_reached_length_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_not_reached_scored_simple_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_reached_scored_simple_unordered OK
100: test_seeds_seed_set_base_container_functions_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_single_threshold_reached_length_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_single_threshold_not_reached_length_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_single_threshold_reached_score_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_single_threshold_not_reached_score_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_no_threshold_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_right_merging_possible_no_threshold_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_impossible_no_threshold_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_not_reached_length_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_reached_length_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_not_reached_scored_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_reached_scored_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_no_threshold_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chained_chain_right_chaining_possible_no_threshold_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_impossible_no_threshold_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_threshold_not_reached_length_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_threshold_reached_length_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_threshold_not_reached_scored_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_threshold_reached_scored_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_no_threshold_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_right_chaining_possible_no_threshold_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_impossible_no_threshold_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_not_reached_length_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_reached_length_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_not_reached_scored_chained_unordered OK
100: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_reached_scored_chained_unordered OK
100: **************************************
100:  Total Tests: 54
100:  Skipped:     0
100:  Errors:      0
100: **************************************
101: TEST SUITE test_seeds_seed_set
101: SEQAN_ENABLE_DEBUG == 1
101: SEQAN_ENABLE_TESTING == 1
101: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
101: SEQAN_ASYNC_IO == 1
101: test_seeds_seed_set_container_functions_unordered OK
101: **************************************
101:  Total Tests: 1
101:  Skipped:     0
101:  Errors:      0
101: **************************************
102: TEST SUITE test_banded_chain_impl
102: SEQAN_ENABLE_DEBUG == 1
102: SEQAN_ENABLE_TESTING == 1
102: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
102: SEQAN_ASYNC_IO == 1
102: test_banded_chain_alignment_empty_set_linear OK
102: test_banded_chain_alignment_empty_set_affine OK
102: test_banded_chain_alignment_one_seed_linear OK
102: test_banded_chain_alignment_one_seed_affine OK
102: test_banded_chain_alignment_two_seeds_linear OK
102: test_banded_chain_alignment_two_seeds_affine OK
102: test_banded_chain_alignment_three_seeds_linear OK
102: test_banded_chain_alignment_three_seeds_affine OK
102: test_banded_chain_alignment_special_seeds_linear OK
102: test_banded_chain_alignment_special_seeds_affine OK
102: test_banded_chain_alignment_band_extensions_linear OK
102: test_banded_chain_alignment_band_extensions_affine OK
102: test_banded_chain_alignment_issue_1020 OK
102: test_banded_chain_score_overflow_detection OK
102: **************************************
102:  Total Tests: 14
102:  Skipped:     0
102:  Errors:      0
102: **************************************
103: TEST SUITE test_banded_chain_alignment_interface
103: SEQAN_ENABLE_DEBUG == 1
103: SEQAN_ENABLE_TESTING == 1
103: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
103: SEQAN_ASYNC_IO == 1
103: test_banded_chain_alignment_align_linear_global_one_score OK
103: test_banded_chain_alignment_align_linear_global_two_scores OK
103: test_banded_chain_alignment_align_linear_semi_one_score OK
103: test_banded_chain_alignment_align_linear_semi_two_scores OK
103: test_banded_chain_alignment_align_linear_overlap_one_score OK
103: test_banded_chain_alignment_align_linear_overlap_two_scores OK
103: test_banded_chain_alignment_align_affine_global_one_score OK
103: test_banded_chain_alignment_align_affine_global_two_scores OK
103: test_banded_chain_alignment_align_affine_semi_one_score OK
103: test_banded_chain_alignment_align_affine_semi_two_scores OK
103: test_banded_chain_alignment_align_affine_overlap_one_score OK
103: test_banded_chain_alignment_align_affine_overlap_two_scores OK
103: test_banded_chain_alignment_gaps_linear_global_one_score OK
103: test_banded_chain_alignment_gaps_linear_global_two_score OK
103: test_banded_chain_alignment_gaps_linear_semi_one_score OK
103: test_banded_chain_alignment_gaps_linear_semi_two_score OK
103: test_banded_chain_alignment_gaps_linear_overlap_one_score OK
103: test_banded_chain_alignment_gaps_linear_overlap_two_score OK
103: test_banded_chain_alignment_gaps_affine_global_one_score OK
103: test_banded_chain_alignment_gaps_affine_global_two_scores OK
103: test_banded_chain_alignment_gaps_affine_semi_one_score OK
103: test_banded_chain_alignment_gaps_affine_semi_two_scores OK
103: test_banded_chain_alignment_gaps_affine_overlap_one_score OK
103: test_banded_chain_alignment_gaps_affine_overlap_two_scores OK
103: test_banded_chain_alignment_alignmentgraph_linear_global_one_score OK
103: test_banded_chain_alignment_alignmentgraph_linear_global_two_scores OK
103: test_banded_chain_alignment_alignmentgraph_linear_semi_one_score OK
103: test_banded_chain_alignment_alignmentgraph_linear_semi_two_scores OK
103: test_banded_chain_alignment_alignmentgraph_linear_overlap_one_score OK
103: test_banded_chain_alignment_alignmentgraph_linear_overlap_two_scores OK
104: TEST SUITE test_seq_io
104: SEQAN_ENABLE_DEBUG == 1
104: SEQAN_ENABLE_TESTING == 1
104: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
104: SEQAN_ASYNC_IO == 1
104: test_seq_io_sequence_file_recognize_file_type_gz_fasta OK
104: test_seq_io_sequence_file_recognize_file_type_bz2_fasta OK
104: test_seq_io_sequence_file_recognize_file_format_text_fasta OK
104: test_seq_io_sequence_file_recognize_file_format_text_fastq OK
 93/414 Test #100: test_test_seeds_seed_set_base .....................................................   Passed    0.12 sec
 94/414 Test #101: test_test_seeds_seed_set_unordered ................................................   Passed    0.12 sec
 95/414 Test #102: test_test_seeds_align_banded_chain_impl ...........................................   Passed    0.10 sec
test 105
        Start 105: test_test_sequence

105: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_sequence
105: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence
105: Test timeout computed to be: 10000000
test 106
        Start 106: test_test_sequence_v2

106: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_sequence_v2
106: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence
106: Test timeout computed to be: 10000000
test 107
        Start 107: test_test_stringset_v2

107: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_stringset_v2
107: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence
107: Test timeout computed to be: 10000000
103: test_banded_chain_alignment_alignmentgraph_affine_global_one_score OK
103: test_banded_chain_alignment_alignmentgraph_affine_global_two_scores OK
103: test_banded_chain_alignment_alignmentgraph_affine_semi_one_score OK
103: test_banded_chain_alignment_alignmentgraph_affine_semi_two_scores OK
103: test_banded_chain_alignment_alignmentgraph_affine_overlap_one_score OK
103: test_banded_chain_alignment_alignmentgraph_affine_overlap_two_scores OK
103: test_banded_chain_alignment_fragments_linear_global_one_score OK
103: test_banded_chain_alignment_fragments_linear_global_two_scores OK
103: test_banded_chain_alignment_fragments_linear_semi_one_score OK
103: test_banded_chain_alignment_fragments_linear_semi_two_scores OK
103: test_banded_chain_alignment_fragments_linear_overlap_one_score OK
103: test_banded_chain_alignment_fragments_linear_overlap_two_scores OK
103: test_banded_chain_alignment_fragments_affine_global_one_score OK
103: test_banded_chain_alignment_fragments_affine_global_two_scores OK
103: test_banded_chain_alignment_fragments_affine_semi_one_score OK
103: test_banded_chain_alignment_fragments_affine_semi_two_scores OK
103: test_banded_chain_alignment_fragments_affine_overlap_one_score OK
103: test_banded_chain_alignment_fragments_affine_overlap_two_scores OK
103: test_banded_chain_alignment_stl_vector_adaption OK
103: **************************************
103:  Total Tests: 49
103:  Skipped:     0
103:  Errors:      0
103: **************************************
104: test_tag_select_intersect OK
104: test_seq_io_sequence_file_read_record_text_fasta OK
104: test_seq_io_sequence_file_read_all_text_fasta OK
104: test_seq_io_sequence_file_write_record_text_fasta OK
104: test_seq_io_sequence_file_write_all_text_fasta OK
104: test_seq_io_sequence_file_write_record_text_fastq_no_qual OK
104: test_seq_io_sequence_file_write_record_text_fastq_with_qual OK
104: test_seq_io_sequence_file_write_all_text_fastq_no_qual OK
104: test_seq_io_sequence_file_write_all_text_fastq_with_qual OK
104: test_seq_io_sequence_file_isOpen_fileIn OK
104: test_seq_io_sequence_file_isOpen_fileOut OK
104: test_seq_io_genomic_region_default_constructed OK
104: test_seq_io_genomic_region_from_string OK
104: test_seq_io_genomic_region_clear OK
104: test_seq_io_genomic_region_parse_chrom OK
104: test_seq_io_genomic_region_parse_chrom_begin OK
104: test_seq_io_genomic_region_parse_chrom_begin_end OK
104: test_seq_io_genomic_region_to_string_interval OK
104: test_seq_io_genomic_region_to_string_point OK
104: test_seq_io_genomic_fai_index_build OK
104: test_seq_io_genomic_fai_index_write OK
104: test_seq_io_genomic_fai_index_read OK
104: test_seq_io_genomic_fai_index_read_sequence OK
104: test_seq_io_genomic_fai_index_read_region OK
104: test_stream_read_embl_single_char_array_stream OK
104: test_stream_read_embl_record_char_array_stream OK
105: TEST SUITE Sequence tests
105: SEQAN_ENABLE_DEBUG == 1
105: SEQAN_ENABLE_TESTING == 1
105: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
105: SEQAN_ASYNC_IO == 1
105: test_sequence_adaptions_metafunctions_std_string OK
105: test_sequence_adaptions_iterators_std_string OK
105: test_sequence_adaptions_sequence_interface_std_string OK
105: test_sequence_adaptions_sequence_memory_std_string OK
105: test_sequence_adaptions_metafunctions_std_vector OK
105: test_sequence_adaptions_iterators_std_vector OK
105: test_sequence_adaptions_sequence_interface_std_vector OK
105: test_sequence_adaptions_sequence_memory_std_vector OK
105: test_sequence_adaptions_metafunctions_std_array OK
105: test_sequence_adaptions_iterators_std_array OK
105: test_sequence_adaptions_sequence_interface_std_array OK
105: test_sequence_adaptions_metafunctions_std_list OK
105: test_sequence_adaptions_iterators_std_list OK
105: test_sequence_adaptions_sequence_interface_std_list OK
105: Sequence_Interface OK
105: String_Base OK
105: String_Alloc OK
105: String_Array OK
105: String_Stack OK
105: String_Pointer OK
105: String_CStyle OK
105: String_Packed OK
105: Std_String OK
105: Lexical OK
105: Combinatoric OK
105: Segment OK
105: StringSet_Owner_Default OK
105: StringSet_Concat_Owner_Default OK
105: StringSet_Concat_Owner_ConcatDirect OK
105: StringSet_Id_Dependent_Tight OK
105: StringSet_Id_Dependent_Generous OK
105: StringSetIdHolder_Char_Dependent_Tight OK
105: StringSetIdHolder_Char_Dependent_Generous OK
105: Infix OK
105: Suffix OK
105: ticket317 OK
105: ticket848 OK
105: DEFAULT CONSTRUCTING TestContainer 0x7ffcb9eecaa0
105:   string.data_begin 0x5607a6c06d70
105: COPY CONSTRUCTING TestContainer 0x7ffcb9eecac0
105:   other 0x7ffcb9eecaa0
105:   string.data_begin 0x5607a6c07a20
105: COPY CONSTRUCTING TestContainer 0x5607a6c072f0
105:   other 0x7ffcb9eecac0
105:   string.data_begin 0x5607a6c07ab0
105: DECONSTRUCTING TestContainer 0x7ffcb9eecac0
105:   string.data_begin 0x5607a6c07a20
105: DECONSTRUCTING TestContainer 0x7ffcb9eecaa0
105:   string.data_begin 0x5607a6c06d70
105: DECONSTRUCTING TestContainer 0x5607a6c072f0
105:   string.data_begin 0x5607a6c07ab0
105: test_find_motif_memory_leak_ticket_364 OK
105: ticket901 OK
106: TEST SUITE tests
106: SEQAN_ENABLE_DEBUG == 1
106: SEQAN_ENABLE_TESTING == 1
106: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
106: SEQAN_ASYNC_IO == 1
106: StringTestCommon_DefaultConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_DefaultConstructible type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_DefaultConstructible type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_DefaultConstructible type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_DefaultConstructible type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_DefaultConstructible type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_DefaultConstructible type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_DefaultConstructible type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_DefaultConstructible type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_DefaultConstructible type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_DefaultConstructible type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_DefaultConstructible type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_DefaultConstructible type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_DefaultConstructible type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_DefaultConstructible type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_DefaultConstructible type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_DefaultConstructible type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_DefaultConstructible type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_DefaultConstructible type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_DefaultConstructible type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
107: TEST SUITE tests
107: SEQAN_ENABLE_DEBUG == 1
107: SEQAN_ENABLE_TESTING == 1
107: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
107: SEQAN_ASYNC_IO == 1
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_CopyConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_DefaultConstructible type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Comparison type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Append type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AppendValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Assign type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_AssignValueById type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Back type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Begin type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_BeginPosition type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Clear type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Concat type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_End type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EndPosition type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
 96/414 Test #103: test_test_seeds_banded_chain_alignment_interface ..................................   Passed    0.18 sec
test 108
        Start 108: test_test_sequence_journaled

108: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_sequence_journaled
108: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/sequence_journaled
108: Test timeout computed to be: 10000000
104: test_stream_read_embl_single_mmap OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Erase type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_EraseBack type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Front type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > SKIPPED
107: StringSetTestCommon_GetValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > SKIPPED
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_GetValueById type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Insert type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InsertValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Iter type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Length type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Resize type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Value type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Infix type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Prefix type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_Suffix type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_InfixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_PrefixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Packed<seqan::Alloc<void> > >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<100ul> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Array<1000ul> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<short, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: StringSetTestCommon_SuffixOnValue type parameter seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::ConcatDirect<void> > > OK
107: **************************************
107:  Total Tests: 576
107:  Skipped:     18
107:  Errors:      0
107: **************************************
84: test_parallel_atomic_or OK
108: TEST SUITE test_sequence_journaled
108: SEQAN_ENABLE_DEBUG == 1
108: SEQAN_ENABLE_TESTING == 1
108: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
108: SEQAN_ASYNC_IO == 1
108: test_sequence_journaled_sorted_array_assign OK
108: test_sequence_journaled_sorted_array_set OK
108: test_sequence_journaled_sorted_array_host OK
108: test_sequence_journaled_sorted_array_clear OK
108: test_sequence_journaled_sorted_array_empty OK
108: test_sequence_journaled_sorted_array_erase_position OK
108: test_sequence_journaled_sorted_array_erase_begin_end OK
108: test_sequence_journaled_sorted_array_insert OK
108: test_sequence_journaled_sorted_array_insert_value OK
108: test_sequence_journaled_sorted_array_assign_value OK
108: test_sequence_journaled_sorted_array_subscript_operator OK
108: test_sequence_journaled_sorted_array_assign_infix OK
108: test_sequence_journaled_sorted_array_length OK
108: test_sequence_journaled_sorted_array_virtual_to_host_position OK
108: test_sequence_journaled_sorted_array_host_to_virtual_position OK
108: test_sequence_journaled_sorted_array_copy_constructor OK
108: test_sequence_journaled_sorted_array_begin_end_iterator OK
108: test_sequence_journaled_sorted_array_begin_end_const_iterator OK
108: test_sequence_journaled_sorted_array_subscript_operator_randomized OK
 97/414 Test #107: test_test_stringset_v2 ............................................................   Passed    0.04 sec
test 109
        Start 109: test_test_simd_vector

109: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_simd_vector
109: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd
109: Test timeout computed to be: 10000000
108: test_sequence_journaled_sorted_array_fuzzying OK
108: test_sequence_journaled_sorted_array_segments_read_only OK
108: test_sequence_journaled_sorted_array_segments_read_write OK
108: test_sequence_journaled_sorted_array_flatten OK
108: test_sequence_journaled_sorted_array_reset OK
108: test_sequence_journaled_sorted_array_iterator_sum OK
108: test_sequence_journaled_sorted_array_iterator_difference OK
108: test_sequence_journaled_sorted_array_iterator_relations OK
108: test_sequence_journaled_sorted_array_iterator_decrement OK
108: test_sequence_journaled_sorted_array_iterator_set_position OK
108: test_sequence_journaled_sorted_array_iterator_position OK
108: test_sequence_journaled_sorted_array_iterator_rooted_at_begin OK
108: test_sequence_journaled_sorted_array_iterator_rooted_at_end OK
108: test_sequence_journaled_sorted_array_iterator_rooted_go_begin OK
108: test_sequence_journaled_sorted_array_iterator_rooted_go_end OK
108: test_sequence_journaled_sorted_array_iterator_rooted_container OK
108: **************************************
108:  Total Tests: 35
108:  Skipped:     0
108:  Errors:      0
108: **************************************
 98/414 Test #108: test_test_sequence_journaled ......................................................   Passed    0.02 sec
test 110
        Start 110: test_test_simd_vector_sse4_host

110: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_simd_vector_sse4
110: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd
110: Test timeout computed to be: 10000000
109: TEST SUITE test_simd_vector
109: SEQAN_ENABLE_DEBUG == 1
109: SEQAN_ENABLE_TESTING == 1
109: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
109: SEQAN_ASYNC_IO == 1
109: **************************************
109:  Total Tests: 0
109:  Skipped:     0
109:  Errors:      0
109: **************************************
67: CSATest_IndexSA type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, WTFMIndexConfig<void, unsigned long> > > OK
104: test_stream_read_embl_single_batch_mmap OK
104: test_stream_read_genbank_single_char_array_stream OK
104: test_stream_read_genbank_record_char_array_stream OK
 99/414 Test #109: test_test_simd_vector .............................................................   Passed    0.02 sec
test 111
        Start 111: test_test_simd_vector_avx2_host

111: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_simd_vector_avx2
111: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simd
111: Test timeout computed to be: 10000000
110: TEST SUITE test_simd_vector
110: SEQAN_ENABLE_DEBUG == 1
110: SEQAN_ENABLE_TESTING == 1
110: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
110: SEQAN_ASYNC_IO == 1
110: test_simd_transpose_8x8 OK
110: test_simd_transpose_16x16 OK
110: test_simd_types OK
110: SimdVectorTestCommon_MetaFunctions type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_MetaFunctions type parameter short __vector(8) OK
110: SimdVectorTestCommon_MetaFunctions type parameter int __vector(4) OK
110: SimdVectorTestCommon_MetaFunctions type parameter long __vector(2) OK
110: SimdVectorTestCommon_MetaFunctions type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_MetaFunctions type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_MetaFunctions type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_MetaFunctions type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_SizeOf type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_SizeOf type parameter short __vector(8) OK
110: SimdVectorTestCommon_SizeOf type parameter int __vector(4) OK
110: SimdVectorTestCommon_SizeOf type parameter long __vector(2) OK
110: SimdVectorTestCommon_SizeOf type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_SizeOf type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_SizeOf type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_SizeOf type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_SubscriptType type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_SubscriptType type parameter short __vector(8) OK
110: SimdVectorTestCommon_SubscriptType type parameter int __vector(4) OK
110: SimdVectorTestCommon_SubscriptType type parameter long __vector(2) OK
110: SimdVectorTestCommon_SubscriptType type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_SubscriptType type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_SubscriptType type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_SubscriptType type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_ClearVector type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_ClearVector type parameter short __vector(8) OK
110: SimdVectorTestCommon_ClearVector type parameter int __vector(4) OK
110: SimdVectorTestCommon_ClearVector type parameter long __vector(2) OK
110: SimdVectorTestCommon_ClearVector type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_ClearVector type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_ClearVector type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_ClearVector type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_CreateVector type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_CreateVector type parameter short __vector(8) OK
110: SimdVectorTestCommon_CreateVector type parameter int __vector(4) OK
110: SimdVectorTestCommon_CreateVector type parameter long __vector(2) OK
110: SimdVectorTestCommon_CreateVector type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_CreateVector type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_CreateVector type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_CreateVector type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_FillVectorConstant type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_FillVectorConstant type parameter short __vector(8) OK
110: SimdVectorTestCommon_FillVectorConstant type parameter int __vector(4) OK
110: SimdVectorTestCommon_FillVectorConstant type parameter long __vector(2) OK
110: SimdVectorTestCommon_FillVectorConstant type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_FillVectorConstant type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_FillVectorConstant type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_FillVectorConstant type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_FillVector type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_FillVector type parameter short __vector(8) OK
110: SimdVectorTestCommon_FillVector type parameter int __vector(4) OK
110: SimdVectorTestCommon_FillVector type parameter long __vector(2) OK
110: SimdVectorTestCommon_FillVector type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_FillVector type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_FillVector type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_FillVector type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_CmpEqual type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_CmpEqual type parameter short __vector(8) OK
110: SimdVectorTestCommon_CmpEqual type parameter int __vector(4) OK
110: SimdVectorTestCommon_CmpEqual type parameter long __vector(2) OK
110: SimdVectorTestCommon_CmpEqual type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_CmpEqual type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_CmpEqual type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_CmpEqual type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_CmpGt type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_CmpGt type parameter short __vector(8) OK
110: SimdVectorTestCommon_CmpGt type parameter int __vector(4) OK
110: SimdVectorTestCommon_CmpGt type parameter long __vector(2) OK
110: SimdVectorTestCommon_CmpGt type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_CmpGt type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_CmpGt type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_CmpGt type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Max type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Max type parameter short __vector(8) OK
110: SimdVectorTestCommon_Max type parameter int __vector(4) OK
110: SimdVectorTestCommon_Max type parameter long __vector(2) OK
110: SimdVectorTestCommon_Max type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Max type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Max type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Max type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Min type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Min type parameter short __vector(8) OK
110: SimdVectorTestCommon_Min type parameter int __vector(4) OK
110: SimdVectorTestCommon_Min type parameter long __vector(2) OK
110: SimdVectorTestCommon_Min type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Min type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Min type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Min type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_BitwiseOr type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_BitwiseOr type parameter short __vector(8) OK
110: SimdVectorTestCommon_BitwiseOr type parameter int __vector(4) OK
110: SimdVectorTestCommon_BitwiseOr type parameter long __vector(2) OK
110: SimdVectorTestCommon_BitwiseOr type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_BitwiseOr type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_BitwiseOr type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_BitwiseOr type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_BitwiseOrAssign type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_BitwiseOrAssign type parameter short __vector(8) OK
110: SimdVectorTestCommon_BitwiseOrAssign type parameter int __vector(4) OK
110: SimdVectorTestCommon_BitwiseOrAssign type parameter long __vector(2) OK
110: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_BitwiseAnd type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_BitwiseAnd type parameter short __vector(8) OK
110: SimdVectorTestCommon_BitwiseAnd type parameter int __vector(4) OK
110: SimdVectorTestCommon_BitwiseAnd type parameter long __vector(2) OK
110: SimdVectorTestCommon_BitwiseAnd type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_BitwiseAnd type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_BitwiseAnd type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_BitwiseAnd type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_BitwiseAndAssign type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_BitwiseAndAssign type parameter short __vector(8) OK
110: SimdVectorTestCommon_BitwiseAndAssign type parameter int __vector(4) OK
110: SimdVectorTestCommon_BitwiseAndAssign type parameter long __vector(2) OK
110: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_BitwiseNot type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_BitwiseNot type parameter short __vector(8) OK
110: SimdVectorTestCommon_BitwiseNot type parameter int __vector(4) OK
110: SimdVectorTestCommon_BitwiseNot type parameter long __vector(2) OK
110: SimdVectorTestCommon_BitwiseNot type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_BitwiseNot type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_BitwiseNot type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_BitwiseNot type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Addition type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Addition type parameter short __vector(8) OK
110: SimdVectorTestCommon_Addition type parameter int __vector(4) OK
110: SimdVectorTestCommon_Addition type parameter long __vector(2) OK
110: SimdVectorTestCommon_Addition type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Addition type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Addition type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Addition type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Subtraction type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Subtraction type parameter short __vector(8) OK
110: SimdVectorTestCommon_Subtraction type parameter int __vector(4) OK
110: SimdVectorTestCommon_Subtraction type parameter long __vector(2) OK
110: SimdVectorTestCommon_Subtraction type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Subtraction type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Subtraction type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Subtraction type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Multiplication type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Multiplication type parameter short __vector(8) OK
110: SimdVectorTestCommon_Multiplication type parameter int __vector(4) OK
110: SimdVectorTestCommon_Multiplication type parameter long __vector(2) OK
110: SimdVectorTestCommon_Multiplication type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Multiplication type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Multiplication type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Multiplication type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Division type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Division type parameter short __vector(8) OK
110: SimdVectorTestCommon_Division type parameter int __vector(4) OK
110: SimdVectorTestCommon_Division type parameter long __vector(2) OK
110: SimdVectorTestCommon_Division type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Division type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Division type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Division type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_BitwiseAndNot type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_BitwiseAndNot type parameter short __vector(8) OK
110: SimdVectorTestCommon_BitwiseAndNot type parameter int __vector(4) OK
110: SimdVectorTestCommon_BitwiseAndNot type parameter long __vector(2) OK
110: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_ShiftRightLogical type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_ShiftRightLogical type parameter short __vector(8) OK
110: SimdVectorTestCommon_ShiftRightLogical type parameter int __vector(4) OK
110: SimdVectorTestCommon_ShiftRightLogical type parameter long __vector(2) OK
110: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Blend type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Blend type parameter short __vector(8) OK
110: SimdVectorTestCommon_Blend type parameter int __vector(4) OK
110: SimdVectorTestCommon_Blend type parameter long __vector(2) OK
110: SimdVectorTestCommon_Blend type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Blend type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Blend type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Blend type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Storeu type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Storeu type parameter short __vector(8) OK
110: SimdVectorTestCommon_Storeu type parameter int __vector(4) OK
110: SimdVectorTestCommon_Storeu type parameter long __vector(2) OK
110: SimdVectorTestCommon_Storeu type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Storeu type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Storeu type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Storeu type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Load type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Load type parameter short __vector(8) OK
110: SimdVectorTestCommon_Load type parameter int __vector(4) OK
110: SimdVectorTestCommon_Load type parameter long __vector(2) OK
110: SimdVectorTestCommon_Load type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Load type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Load type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Load type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Gather type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Gather type parameter short __vector(8) OK
110: SimdVectorTestCommon_Gather type parameter int __vector(4) OK
110: SimdVectorTestCommon_Gather type parameter long __vector(2) OK
110: SimdVectorTestCommon_Gather type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Gather type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Gather type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Gather type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_ShuffleConstant1 type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_ShuffleConstant1 type parameter short __vector(8) OK
110: SimdVectorTestCommon_ShuffleConstant1 type parameter int __vector(4) OK
110: SimdVectorTestCommon_ShuffleConstant1 type parameter long __vector(2) OK
110: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_ShuffleConstant2 type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_ShuffleConstant2 type parameter short __vector(8) OK
110: SimdVectorTestCommon_ShuffleConstant2 type parameter int __vector(4) OK
110: SimdVectorTestCommon_ShuffleConstant2 type parameter long __vector(2) OK
110: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned long __vector(2) OK
110: SimdVectorTestCommon_Shuffle type parameter signed char __vector(16) OK
110: SimdVectorTestCommon_Shuffle type parameter short __vector(8) OK
110: SimdVectorTestCommon_Shuffle type parameter int __vector(4) OK
110: SimdVectorTestCommon_Shuffle type parameter long __vector(2) OK
110: SimdVectorTestCommon_Shuffle type parameter unsigned char __vector(16) OK
110: SimdVectorTestCommon_Shuffle type parameter unsigned short __vector(8) OK
110: SimdVectorTestCommon_Shuffle type parameter unsigned int __vector(4) OK
110: SimdVectorTestCommon_Shuffle type parameter unsigned long __vector(2) OK
110: SimdVectorTestGather_CharArray type parameter signed char __vector(16) OK
110: SimdVectorTestGather_CharArray type parameter short __vector(8) OK
110: SimdVectorTestGather_CharArray type parameter int __vector(4) OK
110: SimdVectorTestGather_CharArray type parameter long __vector(2) OK
110: SimdVectorTestGather_CharArray type parameter unsigned char __vector(16) OK
110: SimdVectorTestGather_CharArray type parameter unsigned short __vector(8) OK
110: SimdVectorTestGather_CharArray type parameter unsigned int __vector(4) OK
110: SimdVectorTestGather_CharArray type parameter unsigned long __vector(2) OK
110: SimdVectorTestGather_ShortArray type parameter signed char __vector(16) OK
110: SimdVectorTestGather_ShortArray type parameter short __vector(8) OK
110: SimdVectorTestGather_ShortArray type parameter int __vector(4) OK
110: SimdVectorTestGather_ShortArray type parameter long __vector(2) OK
110: SimdVectorTestGather_ShortArray type parameter unsigned char __vector(16) OK
110: SimdVectorTestGather_ShortArray type parameter unsigned short __vector(8) OK
110: SimdVectorTestGather_ShortArray type parameter unsigned int __vector(4) OK
110: SimdVectorTestGather_ShortArray type parameter unsigned long __vector(2) OK
110: SimdVectorTestGather_IntArray type parameter signed char __vector(16) OK
110: SimdVectorTestGather_IntArray type parameter short __vector(8) OK
110: SimdVectorTestGather_IntArray type parameter int __vector(4) OK
110: SimdVectorTestGather_IntArray type parameter long __vector(2) OK
110: SimdVectorTestGather_IntArray type parameter unsigned char __vector(16) OK
110: SimdVectorTestGather_IntArray type parameter unsigned short __vector(8) OK
110: SimdVectorTestGather_IntArray type parameter unsigned int __vector(4) OK
110: SimdVectorTestGather_IntArray type parameter unsigned long __vector(2) OK
110: SimdVectorTestGather_LongArray type parameter signed char __vector(16) OK
110: SimdVectorTestGather_LongArray type parameter short __vector(8) OK
110: SimdVectorTestGather_LongArray type parameter int __vector(4) OK
110: SimdVectorTestGather_LongArray type parameter long __vector(2) OK
110: SimdVectorTestGather_LongArray type parameter unsigned char __vector(16) OK
110: SimdVectorTestGather_LongArray type parameter unsigned short __vector(8) OK
110: SimdVectorTestGather_LongArray type parameter unsigned int __vector(4) OK
110: SimdVectorTestGather_LongArray type parameter unsigned long __vector(2) OK
110: SimdVectorTestGather_UCharArray type parameter signed char __vector(16) OK
110: SimdVectorTestGather_UCharArray type parameter short __vector(8) OK
110: SimdVectorTestGather_UCharArray type parameter int __vector(4) OK
110: SimdVectorTestGather_UCharArray type parameter long __vector(2) OK
110: SimdVectorTestGather_UCharArray type parameter unsigned char __vector(16) OK
110: SimdVectorTestGather_UCharArray type parameter unsigned short __vector(8) OK
110: SimdVectorTestGather_UCharArray type parameter unsigned int __vector(4) OK
110: SimdVectorTestGather_UCharArray type parameter unsigned long __vector(2) OK
110: SimdVectorTestGather_UShortArray type parameter signed char __vector(16) OK
110: SimdVectorTestGather_UShortArray type parameter short __vector(8) OK
110: SimdVectorTestGather_UShortArray type parameter int __vector(4) OK
110: SimdVectorTestGather_UShortArray type parameter long __vector(2) OK
110: SimdVectorTestGather_UShortArray type parameter unsigned char __vector(16) OK
110: SimdVectorTestGather_UShortArray type parameter unsigned short __vector(8) OK
110: SimdVectorTestGather_UShortArray type parameter unsigned int __vector(4) OK
110: SimdVectorTestGather_UShortArray type parameter unsigned long __vector(2) OK
110: SimdVectorTestGather_UIntArray type parameter signed char __vector(16) OK
110: SimdVectorTestGather_UIntArray type parameter short __vector(8) OK
110: SimdVectorTestGather_UIntArray type parameter int __vector(4) OK
110: SimdVectorTestGather_UIntArray type parameter long __vector(2) OK
110: SimdVectorTestGather_UIntArray type parameter unsigned char __vector(16) OK
110: SimdVectorTestGather_UIntArray type parameter unsigned short __vector(8) OK
110: SimdVectorTestGather_UIntArray type parameter unsigned int __vector(4) OK
110: SimdVectorTestGather_UIntArray type parameter unsigned long __vector(2) OK
110: SimdVectorTestGather_ULongArray type parameter signed char __vector(16) OK
110: SimdVectorTestGather_ULongArray type parameter short __vector(8) OK
110: SimdVectorTestGather_ULongArray type parameter int __vector(4) OK
110: SimdVectorTestGather_ULongArray type parameter long __vector(2) OK
110: SimdVectorTestGather_ULongArray type parameter unsigned char __vector(16) OK
110: SimdVectorTestGather_ULongArray type parameter unsigned short __vector(8) OK
110: SimdVectorTestGather_ULongArray type parameter unsigned int __vector(4) OK
110: SimdVectorTestGather_ULongArray type parameter unsigned long __vector(2) OK
110: **************************************
110:  Total Tests: 299
110:  Skipped:     0
110:  Errors:      0
110: **************************************
86: test_pipe_test_sorter OK
86: test_pipe_sampler OK
86: test_pipe_tupler OK
86: test_pipe_tupler_multi OK
86: **************************************
86:  Total Tests: 8
86:  Skipped:     0
86:  Errors:      0
86: **************************************
111: TEST SUITE test_simd_vector
111: SEQAN_ENABLE_DEBUG == 1
111: SEQAN_ENABLE_TESTING == 1
111: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
111: SEQAN_ASYNC_IO == 1
111: test_simd_transpose_8x8 OK
111: test_simd_transpose_16x16 OK
111: test_simd_types OK
111: test_simd_transpose_32x32 OK
111: SimdVectorTestCommon_MetaFunctions type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_MetaFunctions type parameter short __vector(8) OK
111: SimdVectorTestCommon_MetaFunctions type parameter int __vector(4) OK
111: SimdVectorTestCommon_MetaFunctions type parameter long __vector(2) OK
111: SimdVectorTestCommon_MetaFunctions type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_MetaFunctions type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_MetaFunctions type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_MetaFunctions type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_MetaFunctions type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_MetaFunctions type parameter short __vector(16) OK
111: SimdVectorTestCommon_MetaFunctions type parameter int __vector(8) OK
111: SimdVectorTestCommon_MetaFunctions type parameter long __vector(4) OK
111: SimdVectorTestCommon_MetaFunctions type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_MetaFunctions type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_MetaFunctions type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_MetaFunctions type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_SizeOf type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_SizeOf type parameter short __vector(8) OK
111: SimdVectorTestCommon_SizeOf type parameter int __vector(4) OK
111: SimdVectorTestCommon_SizeOf type parameter long __vector(2) OK
111: SimdVectorTestCommon_SizeOf type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_SizeOf type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_SizeOf type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_SizeOf type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_SizeOf type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_SizeOf type parameter short __vector(16) OK
111: SimdVectorTestCommon_SizeOf type parameter int __vector(8) OK
111: SimdVectorTestCommon_SizeOf type parameter long __vector(4) OK
111: SimdVectorTestCommon_SizeOf type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_SizeOf type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_SizeOf type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_SizeOf type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_SubscriptType type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_SubscriptType type parameter short __vector(8) OK
111: SimdVectorTestCommon_SubscriptType type parameter int __vector(4) OK
111: SimdVectorTestCommon_SubscriptType type parameter long __vector(2) OK
111: SimdVectorTestCommon_SubscriptType type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_SubscriptType type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_SubscriptType type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_SubscriptType type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_SubscriptType type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_SubscriptType type parameter short __vector(16) OK
111: SimdVectorTestCommon_SubscriptType type parameter int __vector(8) OK
111: SimdVectorTestCommon_SubscriptType type parameter long __vector(4) OK
111: SimdVectorTestCommon_SubscriptType type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_SubscriptType type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_SubscriptType type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_SubscriptType type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_ClearVector type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_ClearVector type parameter short __vector(8) OK
111: SimdVectorTestCommon_ClearVector type parameter int __vector(4) OK
111: SimdVectorTestCommon_ClearVector type parameter long __vector(2) OK
111: SimdVectorTestCommon_ClearVector type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_ClearVector type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_ClearVector type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_ClearVector type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_ClearVector type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_ClearVector type parameter short __vector(16) OK
111: SimdVectorTestCommon_ClearVector type parameter int __vector(8) OK
111: SimdVectorTestCommon_ClearVector type parameter long __vector(4) OK
111: SimdVectorTestCommon_ClearVector type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_ClearVector type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_ClearVector type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_ClearVector type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_CreateVector type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_CreateVector type parameter short __vector(8) OK
111: SimdVectorTestCommon_CreateVector type parameter int __vector(4) OK
111: SimdVectorTestCommon_CreateVector type parameter long __vector(2) OK
111: SimdVectorTestCommon_CreateVector type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_CreateVector type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_CreateVector type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_CreateVector type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_CreateVector type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_CreateVector type parameter short __vector(16) OK
111: SimdVectorTestCommon_CreateVector type parameter int __vector(8) OK
111: SimdVectorTestCommon_CreateVector type parameter long __vector(4) OK
111: SimdVectorTestCommon_CreateVector type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_CreateVector type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_CreateVector type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_CreateVector type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter short __vector(8) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter int __vector(4) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter long __vector(2) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter short __vector(16) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter int __vector(8) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter long __vector(4) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_FillVectorConstant type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_FillVector type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_FillVector type parameter short __vector(8) OK
111: SimdVectorTestCommon_FillVector type parameter int __vector(4) OK
111: SimdVectorTestCommon_FillVector type parameter long __vector(2) OK
111: SimdVectorTestCommon_FillVector type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_FillVector type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_FillVector type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_FillVector type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_FillVector type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_FillVector type parameter short __vector(16) OK
111: SimdVectorTestCommon_FillVector type parameter int __vector(8) OK
111: SimdVectorTestCommon_FillVector type parameter long __vector(4) OK
111: SimdVectorTestCommon_FillVector type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_FillVector type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_FillVector type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_FillVector type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_CmpEqual type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_CmpEqual type parameter short __vector(8) OK
111: SimdVectorTestCommon_CmpEqual type parameter int __vector(4) OK
111: SimdVectorTestCommon_CmpEqual type parameter long __vector(2) OK
111: SimdVectorTestCommon_CmpEqual type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_CmpEqual type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_CmpEqual type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_CmpEqual type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_CmpEqual type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_CmpEqual type parameter short __vector(16) OK
111: SimdVectorTestCommon_CmpEqual type parameter int __vector(8) OK
111: SimdVectorTestCommon_CmpEqual type parameter long __vector(4) OK
111: SimdVectorTestCommon_CmpEqual type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_CmpEqual type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_CmpEqual type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_CmpEqual type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_CmpGt type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_CmpGt type parameter short __vector(8) OK
111: SimdVectorTestCommon_CmpGt type parameter int __vector(4) OK
111: SimdVectorTestCommon_CmpGt type parameter long __vector(2) OK
111: SimdVectorTestCommon_CmpGt type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_CmpGt type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_CmpGt type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_CmpGt type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_CmpGt type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_CmpGt type parameter short __vector(16) OK
111: SimdVectorTestCommon_CmpGt type parameter int __vector(8) OK
111: SimdVectorTestCommon_CmpGt type parameter long __vector(4) OK
111: SimdVectorTestCommon_CmpGt type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_CmpGt type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_CmpGt type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_CmpGt type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Max type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Max type parameter short __vector(8) OK
111: SimdVectorTestCommon_Max type parameter int __vector(4) OK
111: SimdVectorTestCommon_Max type parameter long __vector(2) OK
111: SimdVectorTestCommon_Max type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Max type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Max type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Max type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Max type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Max type parameter short __vector(16) OK
111: SimdVectorTestCommon_Max type parameter int __vector(8) OK
111: SimdVectorTestCommon_Max type parameter long __vector(4) OK
111: SimdVectorTestCommon_Max type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Max type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Max type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Max type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Min type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Min type parameter short __vector(8) OK
111: SimdVectorTestCommon_Min type parameter int __vector(4) OK
111: SimdVectorTestCommon_Min type parameter long __vector(2) OK
111: SimdVectorTestCommon_Min type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Min type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Min type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Min type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Min type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Min type parameter short __vector(16) OK
111: SimdVectorTestCommon_Min type parameter int __vector(8) OK
111: SimdVectorTestCommon_Min type parameter long __vector(4) OK
111: SimdVectorTestCommon_Min type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Min type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Min type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Min type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_BitwiseOr type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_BitwiseOr type parameter short __vector(8) OK
111: SimdVectorTestCommon_BitwiseOr type parameter int __vector(4) OK
111: SimdVectorTestCommon_BitwiseOr type parameter long __vector(2) OK
111: SimdVectorTestCommon_BitwiseOr type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_BitwiseOr type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_BitwiseOr type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_BitwiseOr type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_BitwiseOr type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_BitwiseOr type parameter short __vector(16) OK
111: SimdVectorTestCommon_BitwiseOr type parameter int __vector(8) OK
111: SimdVectorTestCommon_BitwiseOr type parameter long __vector(4) OK
111: SimdVectorTestCommon_BitwiseOr type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_BitwiseOr type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_BitwiseOr type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_BitwiseOr type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter short __vector(8) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter int __vector(4) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter long __vector(2) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter short __vector(16) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter int __vector(8) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter long __vector(4) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_BitwiseOrAssign type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter short __vector(8) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter int __vector(4) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter long __vector(2) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter short __vector(16) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter int __vector(8) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter long __vector(4) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_BitwiseAnd type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter short __vector(8) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter int __vector(4) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter long __vector(2) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter short __vector(16) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter int __vector(8) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter long __vector(4) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_BitwiseAndAssign type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_BitwiseNot type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_BitwiseNot type parameter short __vector(8) OK
111: SimdVectorTestCommon_BitwiseNot type parameter int __vector(4) OK
111: SimdVectorTestCommon_BitwiseNot type parameter long __vector(2) OK
111: SimdVectorTestCommon_BitwiseNot type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_BitwiseNot type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_BitwiseNot type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_BitwiseNot type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_BitwiseNot type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_BitwiseNot type parameter short __vector(16) OK
111: SimdVectorTestCommon_BitwiseNot type parameter int __vector(8) OK
111: SimdVectorTestCommon_BitwiseNot type parameter long __vector(4) OK
111: SimdVectorTestCommon_BitwiseNot type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_BitwiseNot type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_BitwiseNot type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_BitwiseNot type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Addition type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Addition type parameter short __vector(8) OK
111: SimdVectorTestCommon_Addition type parameter int __vector(4) OK
111: SimdVectorTestCommon_Addition type parameter long __vector(2) OK
111: SimdVectorTestCommon_Addition type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Addition type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Addition type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Addition type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Addition type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Addition type parameter short __vector(16) OK
111: SimdVectorTestCommon_Addition type parameter int __vector(8) OK
111: SimdVectorTestCommon_Addition type parameter long __vector(4) OK
111: SimdVectorTestCommon_Addition type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Addition type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Addition type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Addition type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Subtraction type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Subtraction type parameter short __vector(8) OK
111: SimdVectorTestCommon_Subtraction type parameter int __vector(4) OK
111: SimdVectorTestCommon_Subtraction type parameter long __vector(2) OK
111: SimdVectorTestCommon_Subtraction type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Subtraction type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Subtraction type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Subtraction type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Subtraction type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Subtraction type parameter short __vector(16) OK
111: SimdVectorTestCommon_Subtraction type parameter int __vector(8) OK
111: SimdVectorTestCommon_Subtraction type parameter long __vector(4) OK
111: SimdVectorTestCommon_Subtraction type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Subtraction type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Subtraction type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Subtraction type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Multiplication type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Multiplication type parameter short __vector(8) OK
111: SimdVectorTestCommon_Multiplication type parameter int __vector(4) OK
111: SimdVectorTestCommon_Multiplication type parameter long __vector(2) OK
111: SimdVectorTestCommon_Multiplication type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Multiplication type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Multiplication type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Multiplication type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Multiplication type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Multiplication type parameter short __vector(16) OK
111: SimdVectorTestCommon_Multiplication type parameter int __vector(8) OK
111: SimdVectorTestCommon_Multiplication type parameter long __vector(4) OK
111: SimdVectorTestCommon_Multiplication type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Multiplication type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Multiplication type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Multiplication type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Division type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Division type parameter short __vector(8) OK
111: SimdVectorTestCommon_Division type parameter int __vector(4) OK
111: SimdVectorTestCommon_Division type parameter long __vector(2) OK
111: SimdVectorTestCommon_Division type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Division type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Division type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Division type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Division type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Division type parameter short __vector(16) OK
111: SimdVectorTestCommon_Division type parameter int __vector(8) OK
111: SimdVectorTestCommon_Division type parameter long __vector(4) OK
111: SimdVectorTestCommon_Division type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Division type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Division type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Division type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter short __vector(8) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter int __vector(4) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter long __vector(2) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter short __vector(16) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter int __vector(8) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter long __vector(4) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_BitwiseAndNot type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter short __vector(8) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter int __vector(4) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter long __vector(2) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter short __vector(16) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter int __vector(8) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter long __vector(4) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_ShiftRightLogical type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Blend type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Blend type parameter short __vector(8) OK
111: SimdVectorTestCommon_Blend type parameter int __vector(4) OK
111: SimdVectorTestCommon_Blend type parameter long __vector(2) OK
111: SimdVectorTestCommon_Blend type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Blend type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Blend type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Blend type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Blend type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Blend type parameter short __vector(16) OK
111: SimdVectorTestCommon_Blend type parameter int __vector(8) OK
111: SimdVectorTestCommon_Blend type parameter long __vector(4) OK
111: SimdVectorTestCommon_Blend type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Blend type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Blend type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Blend type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Storeu type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Storeu type parameter short __vector(8) OK
111: SimdVectorTestCommon_Storeu type parameter int __vector(4) OK
111: SimdVectorTestCommon_Storeu type parameter long __vector(2) OK
111: SimdVectorTestCommon_Storeu type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Storeu type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Storeu type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Storeu type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Storeu type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Storeu type parameter short __vector(16) OK
111: SimdVectorTestCommon_Storeu type parameter int __vector(8) OK
111: SimdVectorTestCommon_Storeu type parameter long __vector(4) OK
111: SimdVectorTestCommon_Storeu type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Storeu type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Storeu type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Storeu type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Load type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Load type parameter short __vector(8) OK
111: SimdVectorTestCommon_Load type parameter int __vector(4) OK
111: SimdVectorTestCommon_Load type parameter long __vector(2) OK
111: SimdVectorTestCommon_Load type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Load type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Load type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Load type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Load type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Load type parameter short __vector(16) OK
111: SimdVectorTestCommon_Load type parameter int __vector(8) OK
111: SimdVectorTestCommon_Load type parameter long __vector(4) OK
111: SimdVectorTestCommon_Load type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Load type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Load type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Load type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Gather type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Gather type parameter short __vector(8) OK
111: SimdVectorTestCommon_Gather type parameter int __vector(4) OK
111: SimdVectorTestCommon_Gather type parameter long __vector(2) OK
111: SimdVectorTestCommon_Gather type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Gather type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Gather type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Gather type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Gather type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Gather type parameter short __vector(16) OK
111: SimdVectorTestCommon_Gather type parameter int __vector(8) OK
111: SimdVectorTestCommon_Gather type parameter long __vector(4) OK
111: SimdVectorTestCommon_Gather type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Gather type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Gather type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Gather type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter short __vector(8) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter int __vector(4) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter long __vector(2) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter short __vector(16) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter int __vector(8) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter long __vector(4) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_ShuffleConstant1 type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter short __vector(8) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter int __vector(4) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter long __vector(2) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter short __vector(16) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter int __vector(8) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter long __vector(4) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_ShuffleConstant2 type parameter unsigned long __vector(4) OK
111: SimdVectorTestCommon_Shuffle type parameter signed char __vector(16) OK
111: SimdVectorTestCommon_Shuffle type parameter short __vector(8) OK
111: SimdVectorTestCommon_Shuffle type parameter int __vector(4) OK
111: SimdVectorTestCommon_Shuffle type parameter long __vector(2) OK
111: SimdVectorTestCommon_Shuffle type parameter unsigned char __vector(16) OK
111: SimdVectorTestCommon_Shuffle type parameter unsigned short __vector(8) OK
111: SimdVectorTestCommon_Shuffle type parameter unsigned int __vector(4) OK
111: SimdVectorTestCommon_Shuffle type parameter unsigned long __vector(2) OK
111: SimdVectorTestCommon_Shuffle type parameter signed char __vector(32) OK
111: SimdVectorTestCommon_Shuffle type parameter short __vector(16) OK
111: SimdVectorTestCommon_Shuffle type parameter int __vector(8) OK
111: SimdVectorTestCommon_Shuffle type parameter long __vector(4) OK
111: SimdVectorTestCommon_Shuffle type parameter unsigned char __vector(32) OK
111: SimdVectorTestCommon_Shuffle type parameter unsigned short __vector(16) OK
111: SimdVectorTestCommon_Shuffle type parameter unsigned int __vector(8) OK
111: SimdVectorTestCommon_Shuffle type parameter unsigned long __vector(4) OK
111: SimdVectorTestGather_CharArray type parameter signed char __vector(16) OK
111: SimdVectorTestGather_CharArray type parameter short __vector(8) OK
111: SimdVectorTestGather_CharArray type parameter int __vector(4) OK
111: SimdVectorTestGather_CharArray type parameter long __vector(2) OK
111: SimdVectorTestGather_CharArray type parameter unsigned char __vector(16) OK
111: SimdVectorTestGather_CharArray type parameter unsigned short __vector(8) OK
111: SimdVectorTestGather_CharArray type parameter unsigned int __vector(4) OK
111: SimdVectorTestGather_CharArray type parameter unsigned long __vector(2) OK
111: SimdVectorTestGather_CharArray type parameter signed char __vector(32) OK
111: SimdVectorTestGather_CharArray type parameter short __vector(16) OK
111: SimdVectorTestGather_CharArray type parameter int __vector(8) OK
111: SimdVectorTestGather_CharArray type parameter long __vector(4) OK
111: SimdVectorTestGather_CharArray type parameter unsigned char __vector(32) OK
111: SimdVectorTestGather_CharArray type parameter unsigned short __vector(16) OK
111: SimdVectorTestGather_CharArray type parameter unsigned int __vector(8) OK
111: SimdVectorTestGather_CharArray type parameter unsigned long __vector(4) OK
111: SimdVectorTestGather_ShortArray type parameter signed char __vector(16) OK
111: SimdVectorTestGather_ShortArray type parameter short __vector(8) OK
111: SimdVectorTestGather_ShortArray type parameter int __vector(4) OK
111: SimdVectorTestGather_ShortArray type parameter long __vector(2) OK
111: SimdVectorTestGather_ShortArray type parameter unsigned char __vector(16) OK
111: SimdVectorTestGather_ShortArray type parameter unsigned short __vector(8) OK
111: SimdVectorTestGather_ShortArray type parameter unsigned int __vector(4) OK
111: SimdVectorTestGather_ShortArray type parameter unsigned long __vector(2) OK
111: SimdVectorTestGather_ShortArray type parameter signed char __vector(32) OK
111: SimdVectorTestGather_ShortArray type parameter short __vector(16) OK
111: SimdVectorTestGather_ShortArray type parameter int __vector(8) OK
111: SimdVectorTestGather_ShortArray type parameter long __vector(4) OK
111: SimdVectorTestGather_ShortArray type parameter unsigned char __vector(32) OK
111: SimdVectorTestGather_ShortArray type parameter unsigned short __vector(16) OK
111: SimdVectorTestGather_ShortArray type parameter unsigned int __vector(8) OK
111: SimdVectorTestGather_ShortArray type parameter unsigned long __vector(4) OK
111: SimdVectorTestGather_IntArray type parameter signed char __vector(16) OK
111: SimdVectorTestGather_IntArray type parameter short __vector(8) OK
111: SimdVectorTestGather_IntArray type parameter int __vector(4) OK
111: SimdVectorTestGather_IntArray type parameter long __vector(2) OK
111: SimdVectorTestGather_IntArray type parameter unsigned char __vector(16) OK
111: SimdVectorTestGather_IntArray type parameter unsigned short __vector(8) OK
111: SimdVectorTestGather_IntArray type parameter unsigned int __vector(4) OK
111: SimdVectorTestGather_IntArray type parameter unsigned long __vector(2) OK
111: SimdVectorTestGather_IntArray type parameter signed char __vector(32) OK
111: SimdVectorTestGather_IntArray type parameter short __vector(16) OK
111: SimdVectorTestGather_IntArray type parameter int __vector(8) OK
111: SimdVectorTestGather_IntArray type parameter long __vector(4) OK
111: SimdVectorTestGather_IntArray type parameter unsigned char __vector(32) OK
111: SimdVectorTestGather_IntArray type parameter unsigned short __vector(16) OK
111: SimdVectorTestGather_IntArray type parameter unsigned int __vector(8) OK
111: SimdVectorTestGather_IntArray type parameter unsigned long __vector(4) OK
111: SimdVectorTestGather_LongArray type parameter signed char __vector(16) OK
111: SimdVectorTestGather_LongArray type parameter short __vector(8) OK
111: SimdVectorTestGather_LongArray type parameter int __vector(4) OK
111: SimdVectorTestGather_LongArray type parameter long __vector(2) OK
111: SimdVectorTestGather_LongArray type parameter unsigned char __vector(16) OK
111: SimdVectorTestGather_LongArray type parameter unsigned short __vector(8) OK
111: SimdVectorTestGather_LongArray type parameter unsigned int __vector(4) OK
111: SimdVectorTestGather_LongArray type parameter unsigned long __vector(2) OK
111: SimdVectorTestGather_LongArray type parameter signed char __vector(32) OK
111: SimdVectorTestGather_LongArray type parameter short __vector(16) OK
111: SimdVectorTestGather_LongArray type parameter int __vector(8) OK
111: SimdVectorTestGather_LongArray type parameter long __vector(4) OK
111: SimdVectorTestGather_LongArray type parameter unsigned char __vector(32) OK
111: SimdVectorTestGather_LongArray type parameter unsigned short __vector(16) OK
111: SimdVectorTestGather_LongArray type parameter unsigned int __vector(8) OK
111: SimdVectorTestGather_LongArray type parameter unsigned long __vector(4) OK
111: SimdVectorTestGather_UCharArray type parameter signed char __vector(16) OK
111: SimdVectorTestGather_UCharArray type parameter short __vector(8) OK
111: SimdVectorTestGather_UCharArray type parameter int __vector(4) OK
111: SimdVectorTestGather_UCharArray type parameter long __vector(2) OK
111: SimdVectorTestGather_UCharArray type parameter unsigned char __vector(16) OK
111: SimdVectorTestGather_UCharArray type parameter unsigned short __vector(8) OK
111: SimdVectorTestGather_UCharArray type parameter unsigned int __vector(4) OK
111: SimdVectorTestGather_UCharArray type parameter unsigned long __vector(2) OK
111: SimdVectorTestGather_UCharArray type parameter signed char __vector(32) OK
111: SimdVectorTestGather_UCharArray type parameter short __vector(16) OK
111: SimdVectorTestGather_UCharArray type parameter int __vector(8) OK
111: SimdVectorTestGather_UCharArray type parameter long __vector(4) OK
111: SimdVectorTestGather_UCharArray type parameter unsigned char __vector(32) OK
111: SimdVectorTestGather_UCharArray type parameter unsigned short __vector(16) OK
111: SimdVectorTestGather_UCharArray type parameter unsigned int __vector(8) OK
111: SimdVectorTestGather_UCharArray type parameter unsigned long __vector(4) OK
111: SimdVectorTestGather_UShortArray type parameter signed char __vector(16) OK
111: SimdVectorTestGather_UShortArray type parameter short __vector(8) OK
111: SimdVectorTestGather_UShortArray type parameter int __vector(4) OK
111: SimdVectorTestGather_UShortArray type parameter long __vector(2) OK
111: SimdVectorTestGather_UShortArray type parameter unsigned char __vector(16) OK
111: SimdVectorTestGather_UShortArray type parameter unsigned short __vector(8) OK
111: SimdVectorTestGather_UShortArray type parameter unsigned int __vector(4) OK
111: SimdVectorTestGather_UShortArray type parameter unsigned long __vector(2) OK
111: SimdVectorTestGather_UShortArray type parameter signed char __vector(32) OK
111: SimdVectorTestGather_UShortArray type parameter short __vector(16) OK
111: SimdVectorTestGather_UShortArray type parameter int __vector(8) OK
111: SimdVectorTestGather_UShortArray type parameter long __vector(4) OK
111: SimdVectorTestGather_UShortArray type parameter unsigned char __vector(32) OK
111: SimdVectorTestGather_UShortArray type parameter unsigned short __vector(16) OK
111: SimdVectorTestGather_UShortArray type parameter unsigned int __vector(8) OK
111: SimdVectorTestGather_UShortArray type parameter unsigned long __vector(4) OK
111: SimdVectorTestGather_UIntArray type parameter signed char __vector(16) OK
111: SimdVectorTestGather_UIntArray type parameter short __vector(8) OK
111: SimdVectorTestGather_UIntArray type parameter int __vector(4) OK
111: SimdVectorTestGather_UIntArray type parameter long __vector(2) OK
111: SimdVectorTestGather_UIntArray type parameter unsigned char __vector(16) OK
111: SimdVectorTestGather_UIntArray type parameter unsigned short __vector(8) OK
111: SimdVectorTestGather_UIntArray type parameter unsigned int __vector(4) OK
111: SimdVectorTestGather_UIntArray type parameter unsigned long __vector(2) OK
111: SimdVectorTestGather_UIntArray type parameter signed char __vector(32) OK
111: SimdVectorTestGather_UIntArray type parameter short __vector(16) OK
111: SimdVectorTestGather_UIntArray type parameter int __vector(8) OK
111: SimdVectorTestGather_UIntArray type parameter long __vector(4) OK
111: SimdVectorTestGather_UIntArray type parameter unsigned char __vector(32) OK
111: SimdVectorTestGather_UIntArray type parameter unsigned short __vector(16) OK
111: SimdVectorTestGather_UIntArray type parameter unsigned int __vector(8) OK
111: SimdVectorTestGather_UIntArray type parameter unsigned long __vector(4) OK
111: SimdVectorTestGather_ULongArray type parameter signed char __vector(16) OK
111: SimdVectorTestGather_ULongArray type parameter short __vector(8) OK
111: SimdVectorTestGather_ULongArray type parameter int __vector(4) OK
111: SimdVectorTestGather_ULongArray type parameter long __vector(2) OK
111: SimdVectorTestGather_ULongArray type parameter unsigned char __vector(16) OK
111: SimdVectorTestGather_ULongArray type parameter unsigned short __vector(8) OK
111: SimdVectorTestGather_ULongArray type parameter unsigned int __vector(4) OK
111: SimdVectorTestGather_ULongArray type parameter unsigned long __vector(2) OK
111: SimdVectorTestGather_ULongArray type parameter signed char __vector(32) OK
111: SimdVectorTestGather_ULongArray type parameter short __vector(16) OK
111: SimdVectorTestGather_ULongArray type parameter int __vector(8) OK
111: SimdVectorTestGather_ULongArray type parameter long __vector(4) OK
111: SimdVectorTestGather_ULongArray type parameter unsigned char __vector(32) OK
111: SimdVectorTestGather_ULongArray type parameter unsigned short __vector(16) OK
111: SimdVectorTestGather_ULongArray type parameter unsigned int __vector(8) OK
111: SimdVectorTestGather_ULongArray type parameter unsigned long __vector(4) OK
111: **************************************
111:  Total Tests: 596
111:  Skipped:     0
111:  Errors:      0
111: **************************************
100/414 Test  #86: test_test_pipe ....................................................................   Passed    0.94 sec
101/414 Test #110: test_test_simd_vector_sse4_host ...................................................   Passed    0.03 sec
102/414 Test #111: test_test_simd_vector_avx2_host ...................................................   Passed    0.01 sec
test 112
        Start 112: test_test_simple_intervals_io

112: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_simple_intervals_io
112: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/simple_intervals_io
112: Test timeout computed to be: 10000000
test 113
        Start 113: test_test_statistics

113: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_statistics
113: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/statistics
113: Test timeout computed to be: 10000000
test 114
        Start 114: test_test_store

114: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_store
114: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/store
114: Test timeout computed to be: 10000000
104: test_stream_read_genbank_single_mmap OK
104: test_stream_read_genbank_single_batch_mmap OK
104: test_seq_io_bam_file_sam_read_sequences OK
104: test_seq_io_bam_file_sam_read_sequences_and_qualities OK
104: test_seq_io_bam_file_sam_write_sequences OK
104: test_seq_io_bam_file_sam_write_sequences_and_qualities OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
105: ticket1108 OK
105: String_Packed_Extension OK
105: **************************************
105:  Total Tests: 41
105:  Skipped:     0
105:  Errors:      0
105: **************************************
112: TEST SUITE test_simple_intervals_io
112: SEQAN_ENABLE_DEBUG == 1
112: SEQAN_ENABLE_TESTING == 1
112: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
112: SEQAN_ASYNC_IO == 1
112: test_simple_intervals_io_read_records OK
112: test_simple_intervals_io_write_records OK
112: test_simple_intervals_io_smart_file_read OK
112: test_simple_intervals_io_smart_file_write OK
112: **************************************
112:  Total Tests: 4
112:  Skipped:     0
112:  Errors:      0
112: **************************************
113: TEST SUITE test_statistics
113: SEQAN_ENABLE_DEBUG == 1
113: SEQAN_ENABLE_TESTING == 1
113: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
113: SEQAN_ASYNC_IO == 1
113: test_statistics_markov_model OK
114: TEST SUITE test_store
114: SEQAN_ENABLE_DEBUG == 1
114: SEQAN_ENABLE_TESTING == 1
114: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
114: SEQAN_ASYNC_IO == 1
103/414 Test #105: test_test_sequence ................................................................   Passed    0.21 sec
104/414 Test #112: test_test_simple_intervals_io .....................................................   Passed    0.06 sec
test 115
        Start 115: test_test_stream

115: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_stream
115: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/stream
115: Test timeout computed to be: 10000000
test 116
        Start 116: test_test_find_swift

116: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_find_swift
116: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/swift_local
116: Test timeout computed to be: 10000000
113: test_statistics_statistics OK
113: **************************************
113:  Total Tests: 2
113:  Skipped:     0
113:  Errors:      0
113: **************************************
114: test_store_io_read_ucsc_known_genes OK
114: test_store_io_read_ucsc_known_genes_and_isoforms OK
114: test_store_io_write_ucsc_known_genes OK
114: test_store_io_read_gff OK
114: test_store_io_write_gff OK
114: test_store_io_read_gtf OK
114: test_store_io_write_gtf OK
114: test_store_io_readwrite_amos OK
114: test_store_io_read_amos OK
66: IndexTest_OpenSave type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, seqan::FMIndexConfig<void, unsigned long, 1u, 1u> > > OK
66: **************************************
66:  Total Tests: 28
66:  Skipped:     0
66:  Errors:      0
66: **************************************
115: TEST SUITE tests
115: SEQAN_ENABLE_DEBUG == 1
115: SEQAN_ENABLE_TESTING == 1
115: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
115: SEQAN_ASYNC_IO == 1
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<unsigned short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<unsigned short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<unsigned int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<unsigned long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<unsigned long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<unsigned long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<float, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<float, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<double, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_UnsignedSource type parameter seqan::Pair<double, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<unsigned short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<unsigned short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<unsigned int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<unsigned long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<unsigned long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<unsigned long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<float, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<float, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<double, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_SignedSource type parameter seqan::Pair<double, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<unsigned short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<unsigned short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<unsigned int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<unsigned long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<unsigned long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<unsigned long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<float, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<float, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<double, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_FloatingPointSource type parameter seqan::Pair<double, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<unsigned short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<unsigned short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<unsigned int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<unsigned long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<unsigned long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<unsigned long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<float, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<float, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<double, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongPrefixSource type parameter seqan::Pair<double, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<unsigned short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<unsigned short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<unsigned int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<unsigned long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<unsigned long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<unsigned long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<float, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<float, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<double, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_WrongSuffixSource type parameter seqan::Pair<double, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<unsigned short, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<unsigned short, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<unsigned int, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<unsigned int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<unsigned long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<unsigned long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<unsigned long long, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<unsigned long long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<float, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<float, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<double, seqan::String<char, seqan::Alloc<void> >, void> OK
115: LexicalCastTest_Exception type parameter seqan::Pair<double, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, short, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, int, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, long, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, long long, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, unsigned short, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, unsigned int, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, unsigned long, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, unsigned long long, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, float, void> OK
115: AppendUnsignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, double, void> OK
115: AppendSignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, short, void> OK
115: AppendSignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, int, void> OK
115: AppendSignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, long, void> OK
115: AppendSignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, long long, void> OK
115: AppendSignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, float, void> OK
115: AppendSignedTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, double, void> OK
115: AppendFloatingPointTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, float, void> OK
115: AppendFloatingPointTest_AppendNumber type parameter seqan::Pair<seqan::String<char, seqan::Alloc<void> >, double, void> OK
115: TokenizationTest_read type parameter seqan::String<char, seqan::Alloc<void> > OK
115: TokenizationTest_read type parameter std::basic_ifstream<char, std::char_traits<char> > OK
115: TokenizationTest_read type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: TokenizationTest_read type parameter seqan::Iter<std::basic_ifstream<char, std::char_traits<char> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > > OK
115: TokenizationTest_ReadIgnoring type parameter seqan::String<char, seqan::Alloc<void> > OK
115: TokenizationTest_ReadIgnoring type parameter std::basic_ifstream<char, std::char_traits<char> > OK
115: TokenizationTest_ReadIgnoring type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: TokenizationTest_ReadIgnoring type parameter seqan::Iter<std::basic_ifstream<char, std::char_traits<char> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > > OK
115: TokenizationTest_ReadUntil_ReadLine type parameter seqan::String<char, seqan::Alloc<void> > OK
115: TokenizationTest_ReadUntil_ReadLine type parameter std::basic_ifstream<char, std::char_traits<char> > OK
115: TokenizationTest_ReadUntil_ReadLine type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: TokenizationTest_ReadUntil_ReadLine type parameter seqan::Iter<std::basic_ifstream<char, std::char_traits<char> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > > OK
115: TokenizationTest_SkipUntil type parameter seqan::String<char, seqan::Alloc<void> > OK
115: TokenizationTest_SkipUntil type parameter std::basic_ifstream<char, std::char_traits<char> > OK
115: TokenizationTest_SkipUntil type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: TokenizationTest_SkipUntil type parameter seqan::Iter<std::basic_ifstream<char, std::char_traits<char> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > > OK
115: TokenizationTest_SkipLine type parameter seqan::String<char, seqan::Alloc<void> > OK
115: TokenizationTest_SkipLine type parameter std::basic_ifstream<char, std::char_traits<char> > OK
115: TokenizationTest_SkipLine type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: TokenizationTest_SkipLine type parameter seqan::Iter<std::basic_ifstream<char, std::char_traits<char> >, seqan::StreamIterator<seqan::Tag<seqan::Input_> > > OK
115: FileStreamTest_ReadSimpleUsage type parameter seqan::Async<void> OK
115: FileStreamTest_ReadSimpleUsage type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
115: FileStreamTest_ReadComplexUsage type parameter seqan::Async<void> OK
115: FileStreamTest_ReadComplexUsage type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
115: FileStreamTest_WriteSimpleUsage type parameter seqan::Async<void> OK
115: FileStreamTest_WriteSimpleUsage type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
115: FileStreamTest_WriteComplexUsage type parameter seqan::Async<void> OK
115: FileStreamTest_WriteComplexUsage type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
115: FileStreamTest_Eof type parameter seqan::Async<void> OK
115: FileStreamTest_Eof type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
115: FileStreamTest_Seek type parameter seqan::Async<void> OK
115: FileStreamTest_Seek type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
115: FileStreamTest_Tell type parameter seqan::Async<void> OK
115: FileStreamTest_Tell type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
105/414 Test  #66: test_test_index_base ..............................................................   Passed    2.12 sec
106/414 Test #113: test_test_statistics ..............................................................   Passed    0.08 sec
test 117
        Start 117: test_test_tabix_io

117: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_tabix_io
117: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/tabix_io
117: Test timeout computed to be: 10000000
test 118
        Start 118: test_translation

118: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_translation
118: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/translation
118: Test timeout computed to be: 10000000
116: TEST SUITE test_find_swift
116: SEQAN_ENABLE_DEBUG == 1
116: SEQAN_ENABLE_TESTING == 1
116: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
116: SEQAN_ASYNC_IO == 1
116: test_find_swift OK
116: test_longest_epsMatch OK
116: test_split_xDrop_align OK
116: **************************************
116:  Total Tests: 3
116:  Skipped:     0
116:  Errors:      0
116: **************************************
107/414 Test #116: test_test_find_swift ..............................................................   Passed    0.04 sec
104: test_seq_io_bam_file_bam_read_sequences OK
117: TEST SUITE test_tabix_io
117: SEQAN_ENABLE_DEBUG == 1
117: SEQAN_ENABLE_TESTING == 1
117: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
117: SEQAN_ASYNC_IO == 1
118: TEST SUITE test_translation
118: SEQAN_ENABLE_DEBUG == 1
118: SEQAN_ENABLE_TESTING == 1
118: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
118: SEQAN_ASYNC_IO == 1
118: test_translation_onestring_singleframe_allcodes OK
118: test_translation_onestring_singleframe_allcodes_runtime OK
118: test_translation_onestring_multiframe_serial OK
118: test_translation_onestring_multiframe_concatdirect_serial OK
118: test_translation_stringset_multiframe_serial OK
118: test_translation_stringset_multiframe_concatdirect_serial OK
test 119
        Start 119: test_ucsc_io

119: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_ucsc_io
119: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/ucsc_io
119: Test timeout computed to be: 10000000
104: test_seq_io_bam_file_bam_read_sequences_and_qualities OK
119: TEST SUITE test_ucsc_io
119: SEQAN_ENABLE_DEBUG == 1
119: SEQAN_ENABLE_TESTING == 1
119: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
119: SEQAN_ASYNC_IO == 1
119: test_ucsc_io_read_record_ucsc_known_genes OK
119: test_ucsc_io_read_record_ucsc_known_isoforms OK
119: test_ucsc_io_write_record_ucsc_known_genes OK
119: test_ucsc_io_write_record_ucsc_known_isoforms OK
119: test_ucsc_io_ucsc_file_in_read_record_ucsc_known_genes OK
119: test_ucsc_io_ucsc_file_in_read_record_ucsc_known_isoforms OK
119: test_ucsc_io_ucsc_file_out_write_record_ucsc_known_genes OK
119: test_ucsc_io_ucsc_file_out_write_record_ucsc_known_isoforms OK
119: **************************************
119:  Total Tests: 8
119:  Skipped:     0
119:  Errors:      0
119: **************************************
108/414 Test #119: test_ucsc_io ......................................................................   Passed    0.02 sec
test 120
        Start 120: test_test_vcf_io

120: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_vcf_io
120: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/tests/vcf_io
120: Test timeout computed to be: 10000000
120: TEST SUITE test_vcf_io
120: SEQAN_ENABLE_DEBUG == 1
120: SEQAN_ENABLE_TESTING == 1
120: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
120: SEQAN_ASYNC_IO == 1
120: test_vcf_io_read_vcf_header OK
120: test_vcf_io_read_vcf_record OK
120: test_vcf_io_vcf_file_read_record OK
120: test_vcf_io_write_vcf_header OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
120: test_vcf_io_write_vcf_record OK
120: test_vcf_io_vcf_file_write_record OK
120: test_vcf_io_isOpen_fileIn OK
120: test_vcf_io_isOpen_fileOut OK
120: **************************************
120:  Total Tests: 8
120:  Skipped:     0
120:  Errors:      0
120: **************************************
109/414 Test #120: test_test_vcf_io ..................................................................   Passed    0.03 sec
test 121
        Start 121: test_demo_dox_align_align

121: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_align" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/align.cpp.stdout"
121: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
121: Test timeout computed to be: 10000000
104: test_seq_io_bam_file_bam_write_sequences OK
115: FileStreamTest_ReadLarge type parameter seqan::Async<void> OK
114: test_store_io_write_amos OK
117: test_tabix_io_read_indexed_vcf OK
117: **************************************
117:  Total Tests: 1
117:  Skipped:     0
117:  Errors:      0
117: **************************************
110/414 Test #117: test_test_tabix_io ................................................................   Passed    0.13 sec
test 122
        Start 122: test_demo_dox_align_compute_alignment_stats

122: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_compute_alignment_stats" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/compute_alignment_stats.cpp.stdout"
122: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
122: Test timeout computed to be: 10000000
104: test_seq_io_bam_file_bam_write_sequences_and_qualities OK
104: **************************************
104:  Total Tests: 44
104:  Skipped:     0
104:  Errors:      0
104: **************************************
84: test_parallel_atomic_xor OK
114: test_store_io_sam OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
111/414 Test #104: test_test_seq_io ..................................................................   Passed    0.42 sec
test 123
        Start 123: test_demo_dox_align_gaps_example

123: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_gaps_example" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/gaps_example.cpp.stdout"
123: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
123: Test timeout computed to be: 10000000
115: FileStreamTest_ReadLarge type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
114: test_store_io_sam2 OK
67: CSATest_IndexSA type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<void, unsigned long> > > OK
118: test_translation_onestring_multiframe_parallel OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_CopyConstructible type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_CopyConstructible type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_CopyConstructible type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_CopyConstructible type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_CopyConstructible type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_CopyConstructible type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_CopyConstructible type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_CopyConstructible type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_CopyConstructible type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_CopyConstructible type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_CopyConstructible type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_CopyConstructible type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_CopyConstructible type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_CopyConstructible type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_CopyConstructible type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_CopyConstructible type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_CopyConstructible type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_CopyConstructible type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_CopyConstructible type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_LessOperator type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_LessOperator type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_LessOperator type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
122: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_compute_alignment_stats.
123: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_gaps_example.
122: Return code was 0.
122: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/compute_alignment_stats.cpp.stdout", "None".
122: Standard output was as expected.
122: Standard error was as expected.
123: Return code was 0.
123: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/gaps_example.cpp.stdout", "None".
123: Standard output was as expected.
123: Standard error was as expected.
121: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_align.
115: FileStreamTest_WriteLarge type parameter seqan::Async<void> OK
121: Return code was 0.
121: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/align.cpp.stdout", "None".
121: Standard output was as expected.
121: Standard error was as expected.
112/414 Test #122: test_demo_dox_align_compute_alignment_stats .......................................   Passed    0.30 sec
test 124
        Start 124: test_demo_dox_align_global_alignment_banded

124: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_global_alignment_banded" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_banded.cpp.stdout"
124: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
124: Test timeout computed to be: 10000000
84: test_parallel_atomic_cas OK
113/414 Test #121: test_demo_dox_align_align .........................................................   Passed    0.37 sec
114/414 Test #123: test_demo_dox_align_gaps_example ..................................................   Passed    0.26 sec
test 125
        Start 125: test_demo_dox_align_global_alignment_unbanded

125: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_unbanded.cpp.stdout"
125: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
125: Test timeout computed to be: 10000000
test 126
        Start 126: test_demo_dox_align_integrate_align

126: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_integrate_align" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp.stdout"
126: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
126: Test timeout computed to be: 10000000
118: test_translation_onestring_multiframe_concatdirect_parallel OK
67: CSATest_IndexSA type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, SmallLVFMIndexConfig<void, unsigned long> > > OK
67: CSATest_IndexSA type parameter seqan::Index<seqan::String<bool, seqan::Alloc<void> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
67: CSATest_IndexSA type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
67: CSATest_IndexSA type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
125: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded.
115: FileStreamTest_WriteLarge type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
125: Return code was 0.
125: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_unbanded.cpp.stdout", "None".
125: Standard output was as expected.
125: Standard error was as expected.
114: test_store_io_split_sam OK
115/414 Test #125: test_demo_dox_align_global_alignment_unbanded .....................................   Passed    0.13 sec
test 127
        Start 127: test_demo_dox_align_extend_extend_alignment

127: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_extend_extend_alignment" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp.stdout"
127: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
127: Test timeout computed to be: 10000000
115: FileStreamTest_SeekLarge type parameter seqan::Async<void> OK
126: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_integrate_align.
124: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_global_alignment_banded.
124: Return code was 0.
124: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/global_alignment_banded.cpp.stdout", "None".
124: Standard output was as expected.
124: Standard error was as expected.
126: Return code was 0.
126: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align/integrate_align.cpp.stdout", "None".
126: Standard output was as expected.
126: Standard error was as expected.
116/414 Test #126: test_demo_dox_align_integrate_align ...............................................   Passed    0.19 sec
test 128
        Start 128: test_demo_dox_align_split_split_alignment

128: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_split_split_alignment" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_split/split_alignment.cpp.stdout"
128: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
128: Test timeout computed to be: 10000000
127: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_extend_extend_alignment.
117/414 Test #124: test_demo_dox_align_global_alignment_banded .......................................   Passed    0.23 sec
test 129
        Start 129: test_demo_dox_bam_io_bam_tags_dict

129: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_bam_io_bam_tags_dict" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_tags_dict.cpp.stdout"
129: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
129: Test timeout computed to be: 10000000
115: FileStreamTest_SeekLarge type parameter seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > OK
127: Return code was 0.
127: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_extend/extend_alignment.cpp.stdout", "None".
127: Standard output was as expected.
127: Standard error was as expected.
118/414 Test #127: test_demo_dox_align_extend_extend_alignment .......................................   Passed    0.12 sec
test 130
        Start 130: test_demo_dox_basic_zip_iterator

130: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_basic_zip_iterator" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/zip_iterator.cpp.stdout"
130: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
130: Test timeout computed to be: 10000000
114: test_store_io_read_bam OK
128: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_align_split_split_alignment.
115: VStreamTest_Construct type parameter seqan::Tag<seqan::BgzfFile_> OK
115: VStreamTest_Construct type parameter seqan::Tag<seqan::GZFile_> OK
115: VStreamTest_Construct type parameter seqan::Tag<seqan::BZ2File_> OK
115: VStreamTest_Construct type parameter seqan::Tag<seqan::Nothing_> OK
129: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_bam_io_bam_tags_dict.
129: Return code was 0.
129: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/bam_io/bam_tags_dict.cpp.stdout", "None".
128: Return code was 0.
128: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/align_split/split_alignment.cpp.stdout", "None".
128: Standard output was as expected.
128: Standard error was as expected.
129: Standard output was as expected.
129: Standard error was as expected.
119/414 Test #129: test_demo_dox_bam_io_bam_tags_dict ................................................   Passed    0.09 sec
test 131
        Start 131: test_demo_dox_consensus_consensus_alignment

131: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_consensus_consensus_alignment" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp.stdout"
131: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
131: Test timeout computed to be: 10000000
130: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_basic_zip_iterator.
120/414 Test #128: test_demo_dox_align_split_split_alignment .........................................   Passed    0.13 sec
test 132
        Start 132: test_demo_dox_find_finder_index

132: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_find_finder_index" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp.stdout"
132: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
132: Test timeout computed to be: 10000000
84: test_parallel_atomic_min OK
130: Return code was 0.
130: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/basic/zip_iterator.cpp.stdout", "None".
130: Standard output was as expected.
130: Standard error was as expected.
121/414 Test #130: test_demo_dox_basic_zip_iterator ..................................................   Passed    0.10 sec
test 133
        Start 133: test_demo_dox_find_finder_online

133: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_find_finder_online" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_online.cpp.stdout"
133: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
133: Test timeout computed to be: 10000000
115: VStreamTest_OpenClose type parameter seqan::Tag<seqan::BgzfFile_> OK
115: VStreamTest_OpenClose type parameter seqan::Tag<seqan::GZFile_> OK
115: VStreamTest_OpenClose type parameter seqan::Tag<seqan::BZ2File_> OK
115: VStreamTest_OpenClose type parameter seqan::Tag<seqan::Nothing_> OK
67: CSATest_IndexSA type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
67: CSATest_BeginEnd type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, WTFMIndexConfig<void, unsigned long> > > OK
67: CSATest_BeginEnd type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, WTFMIndexConfig<void, unsigned long> > > OK
132: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_find_finder_index.
132: Return code was 0.
132: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_index.cpp.stdout", "None".
132: Standard output was as expected.
132: Standard error was as expected.
115: VStreamTest_Decompression type parameter seqan::Tag<seqan::BgzfFile_> OK
115: VStreamTest_Decompression type parameter seqan::Tag<seqan::GZFile_> OK
122/414 Test #132: test_demo_dox_find_finder_index ...................................................   Passed    0.11 sec
test 134
        Start 134: test_demo_dox_graph_algorithms_all_pairs_shortest_path

134: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_all_pairs_shortest_path" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/all_pairs_shortest_path.cpp.stdout"
134: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
134: Test timeout computed to be: 10000000
114: **************************************
114:  Total Tests: 14
114:  Skipped:     0
114:  Errors:      0
114: **************************************
115: VStreamTest_Decompression type parameter seqan::Tag<seqan::BZ2File_> OK
115: VStreamTest_Decompression type parameter seqan::Tag<seqan::Nothing_> OK
131: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_consensus_consensus_alignment.
123/414 Test #114: test_test_store ...................................................................   Passed    0.97 sec
test 135
        Start 135: test_demo_dox_graph_algorithms_bellman_ford_algorithm

135: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_bellman_ford_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/bellman_ford_algorithm.cpp.stdout"
135: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
135: Test timeout computed to be: 10000000
133: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_find_finder_online.
118: test_translation_stringset_multiframe_parallel OK
134: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_all_pairs_shortest_path.
84: test_parallel_atomic_max OK
84: test_parallel_splitter_equidistant OK
84: test_parallel_splitting_compute_splitters OK
84: test_parallel_sum OK
84: test_parallel_partial_sum OK
84: test_parallel_queue_simple OK
84: test_parallel_queue_resize OK
84: test_parallel_queue_non_pod OK
84: threads: 2
84: writers: 1
67: CSATest_BeginEnd type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, WTFMIndexConfig<void, unsigned long> > > OK
133: Return code was 0.
133: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/find/finder_online.cpp.stdout", "None".
133: Standard output was as expected.
133: Standard error was as expected.
131: Return code was 0.
131: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/consensus/consensus_alignment.cpp.stdout", "None".
131: Standard output was as expected.
131: Standard error was as expected.
134: Return code was 0.
134: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/all_pairs_shortest_path.cpp.stdout", "None".
124/414 Test #133: test_demo_dox_find_finder_online ..................................................   Passed    0.52 sec
test 136
        Start 136: test_demo_dox_graph_algorithms_breadth_first_search

136: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_breadth_first_search" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/breadth_first_search.cpp.stdout"
136: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
136: Test timeout computed to be: 10000000
115: VStreamTest_Compression type parameter seqan::Tag<seqan::BgzfFile_> OK
134: Standard output was as expected.
134: Standard error was as expected.
125/414 Test #131: test_demo_dox_consensus_consensus_alignment .......................................   Passed    0.57 sec
test 137
        Start 137: test_demo_dox_graph_algorithms_dag_shortest_path

137: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_dag_shortest_path" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dag_shortest_path.cpp.stdout"
137: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
137: Test timeout computed to be: 10000000
135: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_bellman_ford_algorithm.
135: Return code was 0.
135: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/bellman_ford_algorithm.cpp.stdout", "None".
135: Standard output was as expected.
135: Standard error was as expected.
115: VStreamTest_Compression type parameter seqan::Tag<seqan::GZFile_> OK
126/414 Test #135: test_demo_dox_graph_algorithms_bellman_ford_algorithm .............................   Passed    0.08 sec
test 138
        Start 138: test_demo_dox_graph_algorithms_depth_first_search

138: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_depth_first_search" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/depth_first_search.cpp.stdout"
138: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
138: Test timeout computed to be: 10000000
136: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_breadth_first_search.
136: Return code was 0.
136: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/breadth_first_search.cpp.stdout", "None".
136: Standard output was as expected.
136: Standard error was as expected.
127/414 Test #134: test_demo_dox_graph_algorithms_all_pairs_shortest_path ............................   Passed    0.49 sec
test 139
        Start 139: test_demo_dox_graph_algorithms_dijkstra

139: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_dijkstra" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dijkstra.cpp.stdout"
139: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
139: Test timeout computed to be: 10000000
128/414 Test #136: test_demo_dox_graph_algorithms_breadth_first_search ...............................   Passed    0.07 sec
test 140
        Start 140: test_demo_dox_graph_algorithms_floyd_warshall_algorithm

140: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_floyd_warshall_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/floyd_warshall_algorithm.cpp.stdout"
140: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
140: Test timeout computed to be: 10000000
137: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_dag_shortest_path.
118: test_translation_stringset_multiframe_concatdirect_parallel OK
118: **************************************
118:  Total Tests: 10
118:  Skipped:     0
118:  Errors:      0
118: **************************************
67: CSATest_BeginEnd type parameter seqan::Index<seqan::StringSet<seqan::String<char, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, SmallWTFMIndexConfig<void, unsigned long> > > OK
129/414 Test #118: test_translation ..................................................................   Passed    1.39 sec
test 141
        Start 141: test_demo_dox_graph_algorithms_ford_fulkerson_algorithm

141: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_ford_fulkerson_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.stdout"
141: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
141: Test timeout computed to be: 10000000
137: Return code was 0.
137: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dag_shortest_path.cpp.stdout", "None".
137: Standard output was as expected.
137: Standard error was as expected.
138: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_depth_first_search.
138: Return code was 0.
138: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/depth_first_search.cpp.stdout", "None".
138: Standard output was as expected.
138: Standard error was as expected.
130/414 Test #137: test_demo_dox_graph_algorithms_dag_shortest_path ..................................   Passed    0.12 sec
131/414 Test #138: test_demo_dox_graph_algorithms_depth_first_search .................................   Passed    0.09 sec
test 142
        Start 142: test_demo_dox_graph_algorithms_kruskals_algorithm

142: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_kruskals_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/kruskals_algorithm.cpp.stdout"
142: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
142: Test timeout computed to be: 10000000
test 143
        Start 143: test_demo_dox_graph_algorithms_prims_algorithm

143: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_prims_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/prims_algorithm.cpp.stdout"
143: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
143: Test timeout computed to be: 10000000
140: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_floyd_warshall_algorithm.
140: Return code was 0.
140: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/floyd_warshall_algorithm.cpp.stdout", "None".
139: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_dijkstra.
140: Standard output was as expected.
140: Standard error was as expected.
132/414 Test #140: test_demo_dox_graph_algorithms_floyd_warshall_algorithm ...........................   Passed    0.09 sec
test 144
        Start 144: test_demo_dox_graph_algorithms_strongly_connected_components

144: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_strongly_connected_components" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/strongly_connected_components.cpp.stdout"
144: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
144: Test timeout computed to be: 10000000
139: Return code was 0.
139: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/dijkstra.cpp.stdout", "None".
139: Standard output was as expected.
139: Standard error was as expected.
133/414 Test #139: test_demo_dox_graph_algorithms_dijkstra ...........................................   Passed    0.14 sec
test 145
        Start 145: test_demo_dox_graph_algorithms_topological_sort

145: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_topological_sort" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/topological_sort.cpp.stdout"
145: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
145: Test timeout computed to be: 10000000
143: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_prims_algorithm.
144: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_strongly_connected_components.
141: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_ford_fulkerson_algorithm.
144: Return code was 0.
144: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/strongly_connected_components.cpp.stdout", "None".
144: Standard output was as expected.
144: Standard error was as expected.
143: Return code was 0.
143: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/prims_algorithm.cpp.stdout", "None".
143: Standard output was as expected.
143: Standard error was as expected.
141: Return code was 0.
141: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.stdout", "None".
134/414 Test #144: test_demo_dox_graph_algorithms_strongly_connected_components ......................   Passed    0.08 sec
test 146
        Start 146: test_demo_dox_graph_algorithms_transitive_closure

146: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_transitive_closure" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/transitive_closure.cpp.stdout"
146: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
146: Test timeout computed to be: 10000000
142: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_kruskals_algorithm.
141: Standard output was as expected.
141: Standard error was as expected.
84: stop reader #1 100000
84: throughput: 284918 values/s
84: cap: 30
84: test_parallel_queue_spsc_fixedsize OK
84: threads: 2
84: writers: 1
135/414 Test #141: test_demo_dox_graph_algorithms_ford_fulkerson_algorithm ...........................   Passed    0.17 sec
136/414 Test #143: test_demo_dox_graph_algorithms_prims_algorithm ....................................   Passed    0.12 sec
test 147
        Start 147: test_demo_dox_graph_types_graph_algo_dijkstra

147: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_types_graph_algo_dijkstra" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_types/graph_algo_dijkstra.cpp.stdout"
147: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
147: Test timeout computed to be: 10000000
test 148
        Start 148: test_demo_dox_index_begin_atEnd_representative

148: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_begin_atEnd_representative" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp.stdout"
148: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
148: Test timeout computed to be: 10000000
142: Return code was 0.
142: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/kruskals_algorithm.cpp.stdout", "None".
142: Standard output was as expected.
142: Standard error was as expected.
84: stop reader #1 100000
84: throughput: 5927296 values/s
84: cap: 76331
84: test_parallel_queue_spsc_dynamicsize OK
84: threads: 4
84: writers: 1
106: StringTestCommon_LessOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
145: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_topological_sort.
145: Return code was 0.
145: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/topological_sort.cpp.stdout", "None".
137/414 Test #142: test_demo_dox_graph_algorithms_kruskals_algorithm .................................   Passed    0.13 sec
test 149
        Start 149: test_demo_dox_index_counting

149: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_counting" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp.stdout"
149: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
149: Test timeout computed to be: 10000000
145: Standard output was as expected.
145: Standard error was as expected.
138/414 Test #145: test_demo_dox_graph_algorithms_topological_sort ...................................   Passed    0.08 sec
test 150
        Start 150: test_demo_dox_index_finder

150: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_finder" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/finder.cpp.stdout"
150: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
150: Test timeout computed to be: 10000000
148: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_begin_atEnd_representative.
147: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_types_graph_algo_dijkstra.
148: Return code was 0.
148: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/begin_atEnd_representative.cpp.stdout", "None".
149: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_counting.
149: Return code was 0.
149: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/counting.cpp.stdout", "None".
149: Standard output was as expected.
149: Standard error was as expected.
115: VStreamTest_Compression type parameter seqan::Tag<seqan::BZ2File_> OK
148: Standard output was as expected.
148: Standard error was as expected.
139/414 Test #149: test_demo_dox_index_counting ......................................................   Passed    0.05 sec
test 151
        Start 151: test_demo_dox_index_getOccurrences_getFrequency_range_getFibre

151: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_getOccurrences_getFrequency_range_getFibre" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.stdout"
151: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
151: Test timeout computed to be: 10000000
147: Return code was 0.
147: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_types/graph_algo_dijkstra.cpp.stdout", "None".
147: Standard output was as expected.
147: Standard error was as expected.
146: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_graph_algorithms_transitive_closure.
115: VStreamTest_Compression type parameter seqan::Tag<seqan::Nothing_> OK
140/414 Test #148: test_demo_dox_index_begin_atEnd_representative ....................................   Passed    0.07 sec
test 152
        Start 152: test_demo_dox_index_iterator

152: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_iterator" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator.cpp.stdout"
152: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
152: Test timeout computed to be: 10000000
150: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_finder.
150: Return code was 0.
150: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/finder.cpp.stdout", "None".
150: Standard output was as expected.
150: Standard error was as expected.
146: Return code was 0.
146: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/graph_algorithms/transitive_closure.cpp.stdout", "None".
146: Standard output was as expected.
146: Standard error was as expected.
67: CSATest_BeginEnd type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, SmallLVFMIndexConfig<void, unsigned long> > > OK
67: CSATest_BeginEnd type parameter seqan::Index<seqan::String<bool, seqan::Alloc<void> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
67: CSATest_BeginEnd type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
67: CSATest_BeginEnd type parameter seqan::Index<seqan::String<char, seqan::Alloc<void> >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
68: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan::Index<seqan::String<bool, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexConfigLevelsPrefix<void, unsigned long> > > > OK
115: VStreamTest_AutoDetection type parameter seqan::Tag<seqan::BgzfFile_> OK
115: VStreamTest_AutoDetection type parameter seqan::Tag<seqan::GZFile_> OK
115: VStreamTest_AutoDetection type parameter seqan::Tag<seqan::BZ2File_> OK
115: VStreamTest_AutoDetection type parameter seqan::Tag<seqan::Nothing_> OK
115: WriteTest_StdString type parameter seqan::String<char, seqan::Alloc<void> > OK
115: InputStreamTest_Open type parameter std::basic_fstream<char, std::char_traits<char> > OK
141/414 Test #146: test_demo_dox_graph_algorithms_transitive_closure .................................   Passed    0.13 sec
142/414 Test #147: test_demo_dox_graph_types_graph_algo_dijkstra .....................................   Passed    0.12 sec
143/414 Test #150: test_demo_dox_index_finder ........................................................   Passed    0.09 sec
test 153
        Start 153: test_demo_dox_index_iterator_short

153: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_iterator_short" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp.stdout"
153: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
153: Test timeout computed to be: 10000000
test 154
        Start 154: test_demo_dox_index_length_countSequences

154: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_length_countSequences" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp.stdout"
154: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
154: Test timeout computed to be: 10000000
test 155
        Start 155: test_demo_dox_index_mummy

155: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_mummy" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp.stdout"
155: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
155: Test timeout computed to be: 10000000
115: InputStreamTest_Open type parameter std::basic_ifstream<char, std::char_traits<char> > OK
151: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_getOccurrences_getFrequency_range_getFibre.
106: StringTestCommon_LessOperator type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
151: Return code was 0.
151: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.stdout", "None".
151: Standard output was as expected.
151: Standard error was as expected.
144/414 Test #151: test_demo_dox_index_getOccurrences_getFrequency_range_getFibre ....................   Passed    0.09 sec
test 156
        Start 156: test_demo_dox_index_open_save

156: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_open_save" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp.stdout"
156: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
156: Test timeout computed to be: 10000000
152: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_iterator.
153: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_iterator_short.
152: Return code was 0.
152: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator.cpp.stdout", "None".
152: Standard output was as expected.
152: Standard error was as expected.
155: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_mummy.
153: Return code was 0.
153: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/iterator_short.cpp.stdout", "None".
153: Standard output was as expected.
153: Standard error was as expected.
145/414 Test #152: test_demo_dox_index_iterator ......................................................   Passed    0.13 sec
test 157
        Start 157: test_demo_dox_index_sufarray

157: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_sufarray" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/sufarray.cpp.stdout"
157: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
157: Test timeout computed to be: 10000000
156: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_open_save.
156: Return code was 0.
156: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/open_save.cpp.stdout", "None".
154: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_length_countSequences.
155: Return code was 0.
155: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/mummy.cpp.stdout", "None".
146/414 Test #153: test_demo_dox_index_iterator_short ................................................   Passed    0.10 sec
test 158
        Start 158: test_demo_dox_index_textAt_indexText_saAt_indexRequire

158: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_textAt_indexText_saAt_indexRequire" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/textAt_indexText_saAt_indexRequire.cpp.stdout"
158: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
158: Test timeout computed to be: 10000000
156: Standard output was as expected.
156: Standard error was as expected.
155: Standard output was as expected.
155: Standard error was as expected.
147/414 Test #155: test_demo_dox_index_mummy .........................................................   Passed    0.10 sec
test 159
        Start 159: test_demo_dox_misc_enumerate_strings

159: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_misc_enumerate_strings" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/enumerate_strings.cpp.stdout"
159: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
159: Test timeout computed to be: 10000000
154: Return code was 0.
154: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/length_countSequences.cpp.stdout", "None".
154: Standard output was as expected.
154: Standard error was as expected.
148/414 Test #156: test_demo_dox_index_open_save .....................................................   Passed    0.08 sec
test 160
        Start 160: test_demo_dox_misc_name_store_cache

160: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_misc_name_store_cache" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/name_store_cache.cpp.stdout"
160: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
160: Test timeout computed to be: 10000000
149/414 Test #154: test_demo_dox_index_length_countSequences .........................................   Passed    0.13 sec
test 161
        Start 161: test_demo_dox_modifier_cyclic_shape

161: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_modifier_cyclic_shape" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape.cpp.stdout"
161: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
161: Test timeout computed to be: 10000000
158: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_textAt_indexText_saAt_indexRequire.
158: Return code was 0.
158: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/textAt_indexText_saAt_indexRequire.cpp.stdout", "None".
158: Standard output was as expected.
158: Standard error was as expected.
157: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_index_sufarray.
157: Return code was 0.
157: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/index/sufarray.cpp.stdout", "None".
157: Standard output was as expected.
157: Standard error was as expected.
150/414 Test #158: test_demo_dox_index_textAt_indexText_saAt_indexRequire ............................   Passed    0.09 sec
test 162
        Start 162: test_demo_dox_modifier_modified_string

162: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_modifier_modified_string" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string.cpp.stdout"
162: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
162: Test timeout computed to be: 10000000
115: InputStreamTest_Get type parameter std::basic_fstream<char, std::char_traits<char> > OK
151/414 Test #157: test_demo_dox_index_sufarray ......................................................   Passed    0.11 sec
test 163
        Start 163: test_demo_dox_modifier_modified_string_mod_view

163: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_modifier_modified_string_mod_view" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_mod_view.cpp.stdout"
163: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
163: Test timeout computed to be: 10000000
159: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_misc_enumerate_strings.
159: Return code was 0.
159: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/enumerate_strings.cpp.stdout", "None".
159: Standard output was as expected.
159: Standard error was as expected.
160: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_misc_name_store_cache.
160: Return code was 0.
160: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/misc/name_store_cache.cpp.stdout", "None".
160: Standard output was as expected.
160: Standard error was as expected.
152/414 Test #159: test_demo_dox_misc_enumerate_strings ..............................................   Passed    0.13 sec
test 164
        Start 164: test_demo_dox_modifier_modified_string_nested

164: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_modifier_modified_string_nested" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_nested.cpp.stdout"
164: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
164: Test timeout computed to be: 10000000
163: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_modifier_modified_string_mod_view.
163: Return code was 0.
163: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_mod_view.cpp.stdout", "None".
163: Standard output was as expected.
163: Standard error was as expected.
162: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_modifier_modified_string.
162: Return code was 0.
162: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string.cpp.stdout", "None".
84: stop reader #2 39572
84: stop reader #3 30051
84: stop reader #1 30377
84: throughput: 282954 values/s
84: cap: 30
84: test_parallel_queue_spmc_fixedsize OK
84: threads: 4
84: writers: 1
161: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_modifier_cyclic_shape.
153/414 Test #160: test_demo_dox_misc_name_store_cache ...............................................   Passed    0.13 sec
test 165
        Start 165: test_demo_dox_parallel_queue_example

165: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_parallel_queue_example" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/parallel/queue_example.cpp.stdout"
165: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
165: Test timeout computed to be: 10000000
162: Standard output was as expected.
162: Standard error was as expected.
84: stop reader #1 100000
84: stop reader #2 0
84: stop reader #3 0
84: throughput: 3929940 values/s
84: cap: 114498
84: test_parallel_queue_spmc_dynamicsize OK
84: threads: 3
84: writers: 2
161: Return code was 0.
161: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/cyclic_shape.cpp.stdout", "None".
161: Standard output was as expected.
161: Standard error was as expected.
106: StringTestCommon_LessOperator type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
154/414 Test #161: test_demo_dox_modifier_cyclic_shape ...............................................   Passed    0.14 sec
test 166
        Start 166: test_demo_dox_parallel_splitter_example

166: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_parallel_splitter_example" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/parallel/splitter_example.cpp.stdout"
166: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
166: Test timeout computed to be: 10000000
67: CSATest_BeginEnd type parameter seqan::Index<seqan::StringSet<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::Owner<seqan::Tag<seqan::Default_> > >, seqan::FMIndex<void, PrefixLVFMIndexConfig<void, unsigned long> > > OK
67: **************************************
67:  Total Tests: 27
67:  Skipped:     0
67:  Errors:      0
67: **************************************
155/414 Test  #67: test_test_index_fm ................................................................   Passed    4.09 sec
156/414 Test #162: test_demo_dox_modifier_modified_string ............................................   Passed    0.11 sec
157/414 Test #163: test_demo_dox_modifier_modified_string_mod_view ...................................   Passed    0.10 sec
test 167
        Start 167: test_demo_dox_score_score

167: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_score_score" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/score/score.cpp.stdout"
167: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
167: Test timeout computed to be: 10000000
test 168
        Start 168: test_demo_dox_seeds_seeds_chaining

168: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_seeds_seeds_chaining" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_chaining.cpp.stdout"
168: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
168: Test timeout computed to be: 10000000
test 169
        Start 169: test_demo_dox_seeds_seeds_extension

169: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_seeds_seeds_extension" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_extension.cpp.stdout"
169: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
169: Test timeout computed to be: 10000000
164: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_modifier_modified_string_nested.
164: Return code was 0.
164: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/modifier/modified_string_nested.cpp.stdout", "None".
164: Standard output was as expected.
164: Standard error was as expected.
106: StringTestCommon_LessOperator type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_LessOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessOperator type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_LessOperator type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_LessOperator type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_LessOperator type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_LessOperator type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_LessOperator type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_LessOperator type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_LessOperator type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_LessOperator type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_LessOperator type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_LessOperator type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_LessOperator type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_LessOperator type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_LessOperator type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_LessOperator type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_LessOperator type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_LessOperator type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_LessOperator type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_LessOperator type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_LessOperator type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
115: InputStreamTest_Get type parameter std::basic_ifstream<char, std::char_traits<char> > OK
115: InputStreamTest_Eof type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: InputStreamTest_Eof type parameter std::basic_ifstream<char, std::char_traits<char> > OK
165: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_parallel_queue_example.
158/414 Test #164: test_demo_dox_modifier_modified_string_nested .....................................   Passed    0.10 sec
test 170
        Start 170: test_demo_dox_seq_io_fai_index_example

170: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_seq_io_fai_index_example" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seq_io/fai_index_example.cpp.stdout"
170: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
170: Test timeout computed to be: 10000000
115: OutputStreamTest_Open type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: OutputStreamTest_Open type parameter std::basic_ofstream<char, std::char_traits<char> > OK
115: OutputStreamTest_Put type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: OutputStreamTest_Put type parameter std::basic_ofstream<char, std::char_traits<char> > OK
115: InputStreamTest_Tell type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: InputStreamTest_Tell type parameter std::basic_ifstream<char, std::char_traits<char> > OK
115: OutputStreamTest_Tell type parameter std::basic_fstream<char, std::char_traits<char> > OK
115: OutputStreamTest_Tell type parameter std::basic_ofstream<char, std::char_traits<char> > OK
166: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_parallel_splitter_example.
166: Return code was 0.
166: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/parallel/splitter_example.cpp.stdout", "None".
166: Standard output was as expected.
166: Standard error was as expected.
106: StringTestCommon_LessEqualOperator type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
115: **************************************
115:  Total Tests: 213
115:  Skipped:     0
115:  Errors:      0
115: **************************************
159/414 Test #115: test_test_stream ..................................................................   Passed    2.09 sec
test 171
        Start 171: test_demo_dox_sequence_container_view_zip

171: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_sequence_container_view_zip" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/container_view_zip.cpp.stdout"
171: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
171: Test timeout computed to be: 10000000
160/414 Test #166: test_demo_dox_parallel_splitter_example ...........................................   Passed    0.10 sec
test 172
        Start 172: test_demo_dox_sequence_string2

172: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_sequence_string2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/string2.cpp.stdout"
172: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
172: Test timeout computed to be: 10000000
167: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_score_score.
165: Return code was 0.
165: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/parallel/queue_example.cpp.stdout", "None".
165: Standard output was as expected.
165: Standard error was as expected.
167: Return code was 0.
167: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/score/score.cpp.stdout", "None".
167: Standard output was as expected.
167: Standard error was as expected.
168: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_seeds_seeds_chaining.
170: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_seq_io_fai_index_example.
161/414 Test #165: test_demo_dox_parallel_queue_example ..............................................   Passed    0.14 sec
test 173
        Start 173: test_demo_dox_sequence_stringset

173: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_sequence_stringset" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/stringset.cpp.stdout"
173: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
173: Test timeout computed to be: 10000000
169: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_seeds_seeds_extension.
162/414 Test #167: test_demo_dox_score_score .........................................................   Passed    0.11 sec
test 174
        Start 174: test_demo_dox_stream_lexical_cast

174: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_stream_lexical_cast" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/stream/lexical_cast.cpp.stdout"
174: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
174: Test timeout computed to be: 10000000
168: Return code was 0.
168: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_chaining.cpp.stdout", "None".
168: Standard output was as expected.
168: Standard error was as expected.
106: StringTestCommon_LessEqualOperator type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
169: Return code was 0.
169: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seeds/seeds_extension.cpp.stdout", "None".
163/414 Test #168: test_demo_dox_seeds_seeds_chaining ................................................   Passed    0.11 sec
test 175
        Start 175: test_demo_howto_align_gaps_clipping

175: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_align_gaps_clipping" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/align_gaps_clipping.cpp.stdout"
175: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
175: Test timeout computed to be: 10000000
169: Standard output was as expected.
169: Standard error was as expected.
170: Return code was 0.
170: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/seq_io/fai_index_example.cpp.stdout", "None".
170: Standard output was as expected.
170: Standard error was as expected.
171: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_sequence_container_view_zip.
164/414 Test #169: test_demo_dox_seeds_seeds_extension ...............................................   Passed    0.11 sec
test 176
        Start 176: test_demo_howto_custom_file_endings

176: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_custom_file_endings" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp.stdout"
176: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
176: Test timeout computed to be: 10000000
173: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_sequence_stringset.
106: StringTestCommon_LessEqualOperator type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_LessEqualOperator type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_LessEqualOperator type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_LessEqualOperator type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_LessEqualOperator type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_LessEqualOperator type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_LessEqualOperator type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_LessEqualOperator type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_LessEqualOperator type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_LessEqualOperator type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_LessEqualOperator type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_LessEqualOperator type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_LessEqualOperator type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_LessEqualOperator type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_LessEqualOperator type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_LessEqualOperator type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_LessEqualOperator type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_LessEqualOperator type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_LessEqualOperator type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_LessEqualOperator type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
165/414 Test #170: test_demo_dox_seq_io_fai_index_example ............................................   Passed    0.11 sec
test 177
        Start 177: test_demo_howto_filter_similar_sequences

177: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_filter_similar_sequences" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp.stderr"
177: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
177: Test timeout computed to be: 10000000
173: Return code was 0.
173: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/stringset.cpp.stdout", "None".
173: Standard output was as expected.
173: Standard error was as expected.
174: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_stream_lexical_cast.
172: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_dox_sequence_string2.
172: Return code was 0.
172: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/string2.cpp.stdout", "None".
171: Return code was 0.
171: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/sequence/container_view_zip.cpp.stdout", "None".
171: Standard output was as expected.
171: Standard error was as expected.
166/414 Test #173: test_demo_dox_sequence_stringset ..................................................   Passed    0.06 sec
test 178
        Start 178: test_demo_howto_scores_init_score

178: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_scores_init_score" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/init_score.cpp.stdout"
178: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
178: Test timeout computed to be: 10000000
172: Standard output was as expected.
172: Standard error was as expected.
167/414 Test #171: test_demo_dox_sequence_container_view_zip .........................................   Passed    0.09 sec
test 179
        Start 179: test_demo_howto_scores_load_score

179: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_scores_load_score" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/load_score.cpp.stdout"
179: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
179: Test timeout computed to be: 10000000
106: StringTestCommon_GreaterOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
168/414 Test #172: test_demo_dox_sequence_string2 ....................................................   Passed    0.09 sec
test 180
        Start 180: test_demo_tutorial_a_first_example_basic_code

180: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_basic_code" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code.cpp.stdout"
180: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
180: Test timeout computed to be: 10000000
174: Return code was 0.
174: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/dox/stream/lexical_cast.cpp.stdout", "None".
84: stop reader #2 100000
84: throughput: 495359 values/s
84: cap: 30
84: test_parallel_queue_mpsc_fixedsize OK
84: test_parallel_thread_pool_construct OK
84: test_parallel_thread_pool_spawn OK
174: Standard output was as expected.
174: Standard error was as expected.
169/414 Test #174: test_demo_dox_stream_lexical_cast .................................................   Passed    0.08 sec
test 181
        Start 181: test_demo_tutorial_a_first_example_basic_code_detailed

181: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_basic_code_detailed" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code_detailed.cpp.stdout"
181: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
181: Test timeout computed to be: 10000000
176: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_custom_file_endings.
176: Return code was 0.
176: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/custom_file_endings.cpp.stdout", "None".
176: Standard output was as expected.
176: Standard error was as expected.
175: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_align_gaps_clipping.
175: Return code was 0.
175: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/align_gaps_clipping.cpp.stdout", "None".
175: Standard output was as expected.
175: Standard error was as expected.
179: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_scores_load_score.
179: Return code was 0.
179: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/load_score.cpp.stdout", "None".
179: Standard output was as expected.
179: Standard error was as expected.
178: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_scores_init_score.
177: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_howto_filter_similar_sequences.
170/414 Test #175: test_demo_howto_align_gaps_clipping ...............................................   Passed    0.08 sec
test 182
        Start 182: test_demo_tutorial_a_first_example_code_encapsulation

182: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_code_encapsulation" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/code_encapsulation.cpp.stdout"
182: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
182: Test timeout computed to be: 10000000
178: Return code was 0.
178: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/scores/init_score.cpp.stdout", "None".
177: Return code was 0.
177: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp.stdout", "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/howto/filter_similar_sequences.cpp.stderr".
106: StringTestCommon_GreaterOperator type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
180: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_basic_code.
171/414 Test #179: test_demo_howto_scores_load_score .................................................   Passed    0.05 sec
test 183
        Start 183: test_demo_tutorial_a_first_example_final_result

183: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_final_result" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/final_result.cpp.stdout"
183: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
183: Test timeout computed to be: 10000000
178: Standard output was as expected.
178: Standard error was as expected.
177: Standard output was as expected.
177: Standard error was as expected.
180: Return code was 0.
180: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code.cpp.stdout", "None".
180: Standard output was as expected.
180: Standard error was as expected.
172/414 Test #176: test_demo_howto_custom_file_endings ...............................................   Passed    0.10 sec
173/414 Test #177: test_demo_howto_filter_similar_sequences ..........................................   Passed    0.09 sec
174/414 Test #180: test_demo_tutorial_a_first_example_basic_code .....................................   Passed    0.07 sec
test 184
        Start 184: test_demo_tutorial_a_first_example_solution_1

184: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_1.cpp.stdout"
184: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
184: Test timeout computed to be: 10000000
test 185
        Start 185: test_demo_tutorial_a_first_example_solution_2

185: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_2.cpp.stdout"
185: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
185: Test timeout computed to be: 10000000
test 186
        Start 186: test_demo_tutorial_a_first_example_solution_3

186: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_3.cpp.stdout"
186: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
186: Test timeout computed to be: 10000000
175/414 Test #178: test_demo_howto_scores_init_score .................................................   Passed    0.12 sec
182: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_code_encapsulation.
182: Return code was 0.
182: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/code_encapsulation.cpp.stdout", "None".
182: Standard output was as expected.
182: Standard error was as expected.
181: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_basic_code_detailed.
181: Return code was 0.
181: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/basic_code_detailed.cpp.stdout", "None".
181: Standard output was as expected.
181: Standard error was as expected.
106: StringTestCommon_GreaterOperator type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_GreaterOperator type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_GreaterOperator type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_GreaterOperator type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_GreaterOperator type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_GreaterOperator type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_GreaterOperator type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_GreaterOperator type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_GreaterOperator type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_GreaterOperator type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_GreaterOperator type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_GreaterOperator type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_GreaterOperator type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_GreaterOperator type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_GreaterOperator type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_GreaterOperator type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_GreaterOperator type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_GreaterOperator type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_GreaterOperator type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_GreaterOperator type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
183: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_final_result.
183: Return code was 0.
183: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/final_result.cpp.stdout", "None".
183: Standard output was as expected.
183: Standard error was as expected.
184: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_1.
184: Return code was 0.
184: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_1.cpp.stdout", "None".
184: Standard output was as expected.
184: Standard error was as expected.
176/414 Test #182: test_demo_tutorial_a_first_example_code_encapsulation .............................   Passed    0.08 sec
test 187
        Start 187: test_demo_tutorial_a_first_example_solution_4

187: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_4" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_4.cpp.stdout"
187: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
187: Test timeout computed to be: 10000000
test 188
        Start 188: test_demo_tutorial_a_first_example_solution_5

188: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_5" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_5.cpp.stdout"
188: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
188: Test timeout computed to be: 10000000
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
177/414 Test #184: test_demo_tutorial_a_first_example_solution_1 .....................................   Passed    0.07 sec
185: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_2.
178/414 Test #181: test_demo_tutorial_a_first_example_basic_code_detailed ............................   Passed    0.11 sec
179/414 Test #183: test_demo_tutorial_a_first_example_final_result ...................................   Passed    0.08 sec
test 189
        Start 189: test_demo_tutorial_a_first_example_solution_6

189: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_6" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_6.cpp.stdout"
189: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
189: Test timeout computed to be: 10000000
test 190
        Start 190: test_demo_tutorial_alignment_align

190: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_align" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align.cpp.stdout"
190: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
190: Test timeout computed to be: 10000000
test 191
        Start 191: test_demo_tutorial_alignment_align_assignment1

191: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_align_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align_assignment1.cpp.stdout"
191: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
191: Test timeout computed to be: 10000000
185: Return code was 0.
185: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_2.cpp.stdout", "None".
185: Standard output was as expected.
185: Standard error was as expected.
186: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_3.
186: Return code was 0.
186: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_3.cpp.stdout", "None".
186: Standard output was as expected.
186: Standard error was as expected.
187: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_4.
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
180/414 Test #185: test_demo_tutorial_a_first_example_solution_2 .....................................   Passed    0.08 sec
181/414 Test #186: test_demo_tutorial_a_first_example_solution_3 .....................................   Passed    0.07 sec
test 192
        Start 192: test_demo_tutorial_alignment_graph

192: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_graph" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph.cpp.stdout"
192: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
192: Test timeout computed to be: 10000000
test 193
        Start 193: test_demo_tutorial_alignment_graph_assignment1

193: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_graph_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph_assignment1.cpp.stdout"
193: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
193: Test timeout computed to be: 10000000
187: Return code was 0.
187: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_4.cpp.stdout", "None".
187: Standard output was as expected.
187: Standard error was as expected.
188: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_5.
188: Return code was 0.
188: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_5.cpp.stdout", "None".
188: Standard output was as expected.
188: Standard error was as expected.
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
189: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_a_first_example_solution_6.
189: Return code was 0.
189: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/a_first_example/solution_6.cpp.stdout", "None".
182/414 Test #187: test_demo_tutorial_a_first_example_solution_4 .....................................   Passed    0.08 sec
183/414 Test #188: test_demo_tutorial_a_first_example_solution_5 .....................................   Passed    0.07 sec
test 194
        Start 194: test_demo_tutorial_alignment_scoring_scheme_affine_dgs

194: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_affine_dgs" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_affine_dgs.cpp.stdout"
194: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
194: Test timeout computed to be: 10000000
test 195
        Start 195: test_demo_tutorial_alignment_scoring_scheme_matrix

195: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_matrix" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_matrix.cpp.stdout"
195: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
195: Test timeout computed to be: 10000000
189: Standard output was as expected.
189: Standard error was as expected.
190: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_align.
190: Return code was 0.
190: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align.cpp.stdout", "None".
190: Standard output was as expected.
190: Standard error was as expected.
191: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_align_assignment1.
191: Return code was 0.
191: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/align_assignment1.cpp.stdout", "None".
193: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_graph_assignment1.
193: Return code was 0.
193: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph_assignment1.cpp.stdout", "None".
193: Standard output was as expected.
193: Standard error was as expected.
192: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_graph.
184/414 Test #189: test_demo_tutorial_a_first_example_solution_6 .....................................   Passed    0.09 sec
test 196
        Start 196: test_demo_tutorial_alignment_scoring_scheme_simple

196: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_simple" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_simple.cpp.stdout"
196: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
196: Test timeout computed to be: 10000000
191: Standard output was as expected.
191: Standard error was as expected.
192: Return code was 0.
192: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/graph.cpp.stdout", "None".
192: Standard output was as expected.
192: Standard error was as expected.
185/414 Test #190: test_demo_tutorial_alignment_align ................................................   Passed    0.10 sec
186/414 Test #191: test_demo_tutorial_alignment_align_assignment1 ....................................   Passed    0.10 sec
187/414 Test #193: test_demo_tutorial_alignment_graph_assignment1 ....................................   Passed    0.06 sec
test 197
        Start 197: test_demo_tutorial_alphabets_assignment_1

197: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_assignment_1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/assignment_1.cpp.stdout"
197: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
197: Test timeout computed to be: 10000000
test 198
        Start 198: test_demo_tutorial_alphabets_assignment_1_solution

198: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/assignment_1_solution.cpp.stdout"
198: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
198: Test timeout computed to be: 10000000
test 199
        Start 199: test_demo_tutorial_alphabets_example_bitsPerValue

199: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_example_bitsPerValue" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/example_bitsPerValue.cpp.stdout"
199: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
199: Test timeout computed to be: 10000000
194: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_affine_dgs.
194: Return code was 0.
194: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_affine_dgs.cpp.stdout", "None".
194: Standard output was as expected.
194: Standard error was as expected.
195: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_matrix.
195: Return code was 0.
195: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_matrix.cpp.stdout", "None".
195: Standard output was as expected.
195: Standard error was as expected.
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_GreaterEqualOperator type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
188/414 Test #192: test_demo_tutorial_alignment_graph ................................................   Passed    0.11 sec
test 200
        Start 200: test_demo_tutorial_alphabets_example_ordValue

200: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_example_ordValue" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/example_ordValue.cpp.stdout"
200: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
200: Test timeout computed to be: 10000000
196: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_simple.
196: Return code was 0.
196: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alignment/scoring_scheme_simple.cpp.stdout", "None".
189/414 Test #194: test_demo_tutorial_alignment_scoring_scheme_affine_dgs ............................   Passed    0.08 sec
190/414 Test #195: test_demo_tutorial_alignment_scoring_scheme_matrix ................................   Passed    0.08 sec
test 201
        Start 201: test_demo_tutorial_alphabets_example_size

201: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_example_size" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/example_size.cpp.stdout"
201: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
201: Test timeout computed to be: 10000000
test 202
        Start 202: test_demo_tutorial_background_and_motivation_example

202: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_background_and_motivation_example" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/background_and_motivation/example.cpp.stdout"
202: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
202: Test timeout computed to be: 10000000
196: Standard output was as expected.
196: Standard error was as expected.
197: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_assignment_1.
191/414 Test #196: test_demo_tutorial_alignment_scoring_scheme_simple ................................   Passed    0.08 sec
test 203
        Start 203: test_demo_tutorial_basic_techniques_base

203: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basic_techniques_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basic_techniques/base.cpp.stdout"
203: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
203: Test timeout computed to be: 10000000
198: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_assignment_1_solution.
200: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_example_ordValue.
200: Return code was 0.
200: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/example_ordValue.cpp.stdout", "None".
200: Standard output was as expected.
200: Standard error was as expected.
197: Return code was 0.
197: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/assignment_1.cpp.stdout", "None".
197: Standard output was as expected.
197: Standard error was as expected.
198: Return code was 0.
198: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/assignment_1_solution.cpp.stdout", "None".
192/414 Test #200: test_demo_tutorial_alphabets_example_ordValue .....................................   Passed    0.06 sec
test 204
        Start 204: test_demo_tutorial_basics_allocator

204: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basics_allocator" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/allocator.cpp.stdout"
204: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
204: Test timeout computed to be: 10000000
199: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_example_bitsPerValue.
199: Return code was 0.
199: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/example_bitsPerValue.cpp.stdout", "None".
199: Standard output was as expected.
199: Standard error was as expected.
198: Standard output was as expected.
198: Standard error was as expected.
201: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_alphabets_example_size.
193/414 Test #197: test_demo_tutorial_alphabets_assignment_1 .........................................   Passed    0.11 sec
194/414 Test #198: test_demo_tutorial_alphabets_assignment_1_solution ................................   Passed    0.10 sec
test 205
        Start 205: test_demo_tutorial_basics_base

205: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basics_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/base.cpp.stdout"
205: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
205: Test timeout computed to be: 10000000
test 206
        Start 206: test_demo_tutorial_basics_show_alphabets

206: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basics_show_alphabets" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/show_alphabets.cpp.stdout"
206: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
206: Test timeout computed to be: 10000000
201: Return code was 0.
201: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/alphabets/example_size.cpp.stdout", "None".
201: Standard output was as expected.
201: Standard error was as expected.
202: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_background_and_motivation_example.
202: Return code was 0.
202: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/background_and_motivation/example.cpp.stdout", "None".
202: Standard output was as expected.
202: Standard error was as expected.
195/414 Test #199: test_demo_tutorial_alphabets_example_bitsPerValue .................................   Passed    0.10 sec
196/414 Test #201: test_demo_tutorial_alphabets_example_size .........................................   Passed    0.08 sec
test 207
        Start 207: test_demo_tutorial_basics_strings

207: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basics_strings" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/strings.cpp.stdout"
207: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
207: Test timeout computed to be: 10000000
test 208
        Start 208: test_demo_tutorial_bed_io_base

208: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/base.cpp.stdout"
208: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
208: Test timeout computed to be: 10000000
203: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basic_techniques_base.
203: Return code was 0.
203: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basic_techniques/base.cpp.stdout", "None".
203: Standard output was as expected.
203: Standard error was as expected.
205: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basics_base.
204: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basics_allocator.
197/414 Test #202: test_demo_tutorial_background_and_motivation_example ..............................   Passed    0.10 sec
198/414 Test #203: test_demo_tutorial_basic_techniques_base ..........................................   Passed    0.08 sec
test 209
        Start 209: test_demo_tutorial_bed_io_example1

209: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/example1.cpp.stdout"
209: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
209: Test timeout computed to be: 10000000
test 210
        Start 210: test_demo_tutorial_bed_io_solution1

210: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution1.cpp.stdout"
210: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
210: Test timeout computed to be: 10000000
205: Return code was 0.
205: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/base.cpp.stdout", "None".
205: Standard output was as expected.
205: Standard error was as expected.
206: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basics_show_alphabets.
206: Return code was 0.
206: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/show_alphabets.cpp.stdout", "None".
206: Standard output was as expected.
206: Standard error was as expected.
106: StringTestCommon_EqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
207: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_basics_strings.
207: Return code was 0.
207: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/strings.cpp.stdout", "None".
199/414 Test #205: test_demo_tutorial_basics_base ....................................................   Passed    0.06 sec
test 211
        Start 211: test_demo_tutorial_bed_io_solution2

211: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution2.cpp.stdout"
211: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
211: Test timeout computed to be: 10000000
207: Standard output was as expected.
207: Standard error was as expected.
208: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_base.
200/414 Test #206: test_demo_tutorial_basics_show_alphabets ..........................................   Passed    0.07 sec
201/414 Test #207: test_demo_tutorial_basics_strings .................................................   Passed    0.07 sec
test 212
        Start 212: test_demo_tutorial_bed_io_solution3

212: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution3.cpp.stdout"
212: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
212: Test timeout computed to be: 10000000
test 213
        Start 213: test_demo_tutorial_blast_io_read_assignment

213: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_blast_io_read_assignment" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/read_assignment.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/read_assignment.cpp.stderr"
213: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
213: Test timeout computed to be: 10000000
208: Return code was 0.
208: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/base.cpp.stdout", "None".
208: Standard output was as expected.
208: Standard error was as expected.
209: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_example1.
209: Return code was 0.
209: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/example1.cpp.stdout", "None".
209: Standard output was as expected.
209: Standard error was as expected.
210: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_solution1.
106: StringTestCommon_EqualOperator type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
211: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_solution2.
202/414 Test #208: test_demo_tutorial_bed_io_base ....................................................   Passed    0.08 sec
203/414 Test #209: test_demo_tutorial_bed_io_example1 ................................................   Passed    0.08 sec
test 214
        Start 214: test_demo_tutorial_blast_io_write_assignment

214: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_blast_io_write_assignment" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/write_assignment.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/write_assignment.cpp.stderr"
214: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
214: Test timeout computed to be: 10000000
test 215
        Start 215: test_demo_tutorial_consensus_alignment_with_positions

215: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_consensus_alignment_with_positions" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp.stdout"
215: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
215: Test timeout computed to be: 10000000
210: Return code was 0.
210: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution1.cpp.stdout", "None".
210: Standard output was as expected.
210: Standard error was as expected.
211: Return code was 0.
211: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution2.cpp.stdout", "None".
211: Standard output was as expected.
211: Standard error was as expected.
213: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_blast_io_read_assignment.
204: Return code was 0.
204: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/basics/allocator.cpp.stdout", "None".
204: Standard output was as expected.
204: Standard error was as expected.
204/414 Test #210: test_demo_tutorial_bed_io_solution1 ...............................................   Passed    0.10 sec
205/414 Test #211: test_demo_tutorial_bed_io_solution2 ...............................................   Passed    0.08 sec
test 216
        Start 216: test_demo_tutorial_consensus_alignment_without_positions

216: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_consensus_alignment_without_positions" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp.stdout"
216: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
216: Test timeout computed to be: 10000000
test 217
        Start 217: test_demo_tutorial_file_io_overview_example1

217: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_file_io_overview_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/example1.cpp.stdout"
217: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
217: Test timeout computed to be: 10000000
213: Return code was 0.
213: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/read_assignment.cpp.stdout", "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/read_assignment.cpp.stderr".
213: Standard output was as expected.
213: Standard error was as expected.
106: StringTestCommon_EqualOperator type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
212: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_bed_io_solution3.
214: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_blast_io_write_assignment.
214: Return code was 0.
214: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/write_assignment.cpp.stdout", "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/blast_io/write_assignment.cpp.stderr".
206/414 Test #204: test_demo_tutorial_basics_allocator ...............................................   Passed    0.19 sec
207/414 Test #213: test_demo_tutorial_blast_io_read_assignment .......................................   Passed    0.06 sec
test 218
        Start 218: test_demo_tutorial_file_io_overview_solution1

218: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_file_io_overview_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution1.cpp.stdout"
218: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
218: Test timeout computed to be: 10000000
test 219
        Start 219: test_demo_tutorial_file_io_overview_solution2

219: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_file_io_overview_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution2.cpp.stdout"
219: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
219: Test timeout computed to be: 10000000
106: StringTestCommon_EqualOperator type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_EqualOperator type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_EqualOperator type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_EqualOperator type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_EqualOperator type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EqualOperator type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_EqualOperator type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_EqualOperator type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EqualOperator type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EqualOperator type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_EqualOperator type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_EqualOperator type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EqualOperator type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EqualOperator type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_EqualOperator type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_EqualOperator type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EqualOperator type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EqualOperator type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_EqualOperator type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_EqualOperator type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
212: Return code was 0.
212: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/bed_io/solution3.cpp.stdout", "None".
212: Standard output was as expected.
212: Standard error was as expected.
214: Standard output was as expected.
214: Standard error was as expected.
216: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_consensus_alignment_without_positions.
216: Return code was 0.
216: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/without_positions.cpp.stdout", "None".
216: Standard output was as expected.
216: Standard error was as expected.
215: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_consensus_alignment_with_positions.
208/414 Test #214: test_demo_tutorial_blast_io_write_assignment ......................................   Passed    0.07 sec
test 220
        Start 220: test_demo_tutorial_file_io_overview_solution3

220: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_file_io_overview_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution3.cpp.stdout"
220: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
220: Test timeout computed to be: 10000000
215: Return code was 0.
215: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/consensus_alignment/with_positions.cpp.stdout", "None".
215: Standard output was as expected.
215: Standard error was as expected.
217: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_file_io_overview_example1.
209/414 Test #212: test_demo_tutorial_bed_io_solution3 ...............................................   Passed    0.12 sec
210/414 Test #216: test_demo_tutorial_consensus_alignment_without_positions ..........................   Passed    0.06 sec
test 221
        Start 221: test_demo_tutorial_fragment_store_access_aligned_reads

221: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_fragment_store_access_aligned_reads" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp.stdout"
221: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
221: Test timeout computed to be: 10000000
test 222
        Start 222: test_demo_tutorial_fragment_store_access_aligned_reads2

222: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_fragment_store_access_aligned_reads2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp.stdout"
222: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
222: Test timeout computed to be: 10000000
219: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_file_io_overview_solution2.
218: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_file_io_overview_solution1.
211/414 Test #215: test_demo_tutorial_consensus_alignment_with_positions .............................   Passed    0.09 sec
test 223
        Start 223: test_demo_tutorial_fragment_store_base

223: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_fragment_store_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/base.cpp.stdout"
223: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
223: Test timeout computed to be: 10000000
217: Return code was 0.
217: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/example1.cpp.stdout", "None".
217: Standard output was as expected.
217: Standard error was as expected.
219: Return code was 0.
219: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution2.cpp.stdout", "None".
219: Standard output was as expected.
219: Standard error was as expected.
221: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_fragment_store_access_aligned_reads.
212/414 Test #217: test_demo_tutorial_file_io_overview_example1 ......................................   Passed    0.08 sec
test 224
        Start 224: test_demo_tutorial_fragment_store_display_aligned_reads

224: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_fragment_store_display_aligned_reads" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp.stdout"
224: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
224: Test timeout computed to be: 10000000
220: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_file_io_overview_solution3.
222: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_fragment_store_access_aligned_reads2.
223: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_fragment_store_base.
213/414 Test #219: test_demo_tutorial_file_io_overview_solution2 .....................................   Passed    0.07 sec
test 225
        Start 225: test_demo_tutorial_generic_programming_example_hashing

225: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_generic_programming_example_hashing" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/generic_programming/example_hashing.cpp.stdout"
225: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
225: Test timeout computed to be: 10000000
223: Return code was 0.
223: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/base.cpp.stdout", "None".
223: Standard output was as expected.
223: Standard error was as expected.
218: Return code was 0.
218: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution1.cpp.stdout", "None".
218: Standard output was as expected.
218: Standard error was as expected.
106: StringTestCommon_UnequalOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
214/414 Test #223: test_demo_tutorial_fragment_store_base ............................................   Passed    0.04 sec
test 226
        Start 226: test_demo_tutorial_generic_programming_template_subclassing

226: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_generic_programming_template_subclassing" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/generic_programming/template_subclassing.cpp.stdout"
226: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
226: Test timeout computed to be: 10000000
221: Return code was 0.
221: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads.cpp.stdout", "None".
221: Standard output was as expected.
221: Standard error was as expected.
222: Return code was 0.
222: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/access_aligned_reads2.cpp.stdout", "None".
222: Standard output was as expected.
222: Standard error was as expected.
215/414 Test #218: test_demo_tutorial_file_io_overview_solution1 .....................................   Passed    0.10 sec
test 227
        Start 227: test_demo_tutorial_genome_annotations_assignment_1_hint

227: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_1_hint" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_hint.cpp.stdout"
227: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
227: Test timeout computed to be: 10000000
220: Return code was 0.
220: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/file_io_overview/solution3.cpp.stdout", "None".
220: Standard output was as expected.
220: Standard error was as expected.
224: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_fragment_store_display_aligned_reads.
216/414 Test #222: test_demo_tutorial_fragment_store_access_aligned_reads2 ...........................   Passed    0.07 sec
test 228
        Start 228: test_demo_tutorial_genome_annotations_assignment_1_solution

228: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_solution.cpp.stdout"
228: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
228: Test timeout computed to be: 10000000
224: Return code was 0.
224: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/fragment_store/display_aligned_reads.cpp.stdout", "None".
224: Standard output was as expected.
224: Standard error was as expected.
225: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_generic_programming_example_hashing.
217/414 Test #220: test_demo_tutorial_file_io_overview_solution3 .....................................   Passed    0.11 sec
218/414 Test #221: test_demo_tutorial_fragment_store_access_aligned_reads ............................   Passed    0.10 sec
219/414 Test #224: test_demo_tutorial_fragment_store_display_aligned_reads ...........................   Passed    0.06 sec
test 229
        Start 229: test_demo_tutorial_genome_annotations_assignment_2_solution

229: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_2_solution.cpp.stdout"
229: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
229: Test timeout computed to be: 10000000
test 230
        Start 230: test_demo_tutorial_genome_annotations_assignment_3_solution

230: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_3_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_3_solution.cpp.stdout"
230: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
230: Test timeout computed to be: 10000000
test 231
        Start 231: test_demo_tutorial_genome_annotations_assignment_4_solution

231: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_4_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_4_solution.cpp.stdout"
231: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
231: Test timeout computed to be: 10000000
225: Return code was 0.
225: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/generic_programming/example_hashing.cpp.stdout", "None".
225: Standard output was as expected.
225: Standard error was as expected.
226: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_generic_programming_template_subclassing.
226: Return code was 0.
226: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/generic_programming/template_subclassing.cpp.stdout", "None".
226: Standard output was as expected.
226: Standard error was as expected.
106: StringTestCommon_UnequalOperator type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
227: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_1_hint.
227: Return code was 0.
227: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_hint.cpp.stdout", "None".
220/414 Test #225: test_demo_tutorial_generic_programming_example_hashing ............................   Passed    0.07 sec
221/414 Test #226: test_demo_tutorial_generic_programming_template_subclassing .......................   Passed    0.06 sec
test 232
        Start 232: test_demo_tutorial_genome_annotations_base

232: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/base.cpp.stdout"
232: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
232: Test timeout computed to be: 10000000
test 233
        Start 233: test_demo_tutorial_gff_and_gtf_io_base

233: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/base.cpp.stdout"
233: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
233: Test timeout computed to be: 10000000
227: Standard output was as expected.
227: Standard error was as expected.
228: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_1_solution.
222/414 Test #227: test_demo_tutorial_genome_annotations_assignment_1_hint ...........................   Passed    0.07 sec
test 234
        Start 234: test_demo_tutorial_gff_and_gtf_io_example1

234: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example1.cpp.stdout"
234: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
234: Test timeout computed to be: 10000000
228: Return code was 0.
228: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_1_solution.cpp.stdout", "None".
228: Standard output was as expected.
228: Standard error was as expected.
229: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_2_solution.
231: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_4_solution.
106: StringTestCommon_UnequalOperator type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
230: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_3_solution.
231: Return code was 0.
231: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_4_solution.cpp.stdout", "None".
229: Return code was 0.
229: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_2_solution.cpp.stdout", "None".
229: Standard output was as expected.
229: Standard error was as expected.
231: Standard output was as expected.
231: Standard error was as expected.
223/414 Test #228: test_demo_tutorial_genome_annotations_assignment_1_solution .......................   Passed    0.07 sec
test 235
        Start 235: test_demo_tutorial_gff_and_gtf_io_example2

235: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_example2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example2.cpp.stdout"
235: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
235: Test timeout computed to be: 10000000
230: Return code was 0.
230: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/assignment_3_solution.cpp.stdout", "None".
230: Standard output was as expected.
230: Standard error was as expected.
232: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_genome_annotations_base.
224/414 Test #229: test_demo_tutorial_genome_annotations_assignment_2_solution .......................   Passed    0.07 sec
225/414 Test #231: test_demo_tutorial_genome_annotations_assignment_4_solution .......................   Passed    0.06 sec
test 236
        Start 236: test_demo_tutorial_gff_and_gtf_io_solution1

236: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution1.cpp.stdout"
236: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
236: Test timeout computed to be: 10000000
test 237
        Start 237: test_demo_tutorial_gff_and_gtf_io_solution2

237: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution2.cpp.stdout"
237: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
237: Test timeout computed to be: 10000000
232: Return code was 0.
232: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/genome_annotations/base.cpp.stdout", "None".
232: Standard output was as expected.
232: Standard error was as expected.
234: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_example1.
234: Return code was 0.
234: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example1.cpp.stdout", "None".
234: Standard output was as expected.
234: Standard error was as expected.
233: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_base.
233: Return code was 0.
233: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/base.cpp.stdout", "None".
233: Standard output was as expected.
233: Standard error was as expected.
106: StringTestCommon_UnequalOperator type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_UnequalOperator type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_UnequalOperator type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_UnequalOperator type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_UnequalOperator type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_UnequalOperator type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_UnequalOperator type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_UnequalOperator type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_UnequalOperator type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_UnequalOperator type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_UnequalOperator type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_UnequalOperator type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_UnequalOperator type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_UnequalOperator type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_UnequalOperator type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_UnequalOperator type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_UnequalOperator type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_UnequalOperator type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_UnequalOperator type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_UnequalOperator type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Assign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Assign type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Assign type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Assign type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Assign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Assign type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
226/414 Test #230: test_demo_tutorial_genome_annotations_assignment_3_solution .......................   Passed    0.09 sec
227/414 Test #232: test_demo_tutorial_genome_annotations_base ........................................   Passed    0.08 sec
228/414 Test #234: test_demo_tutorial_gff_and_gtf_io_example1 ........................................   Passed    0.06 sec
test 238
        Start 238: test_demo_tutorial_gff_and_gtf_io_solution3

238: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution3.cpp.stdout"
238: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
238: Test timeout computed to be: 10000000
test 239
        Start 239: test_demo_tutorial_graph_graph_algo_scc

239: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_graph_graph_algo_scc" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_algo_scc.cpp.stdout"
239: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
239: Test timeout computed to be: 10000000
test 240
        Start 240: test_demo_tutorial_graph_graph_dijkstra

240: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_graph_graph_dijkstra" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_dijkstra.cpp.stdout"
240: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
240: Test timeout computed to be: 10000000
235: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_example2.
235: Return code was 0.
235: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/example2.cpp.stdout", "None".
235: Standard output was as expected.
235: Standard error was as expected.
236: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution1.
236: Return code was 0.
236: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution1.cpp.stdout", "None".
237: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution2.
229/414 Test #233: test_demo_tutorial_gff_and_gtf_io_base ............................................   Passed    0.11 sec
230/414 Test #235: test_demo_tutorial_gff_and_gtf_io_example2 ........................................   Passed    0.12 sec
test 241
        Start 241: test_demo_tutorial_graph_graph_hmm

241: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_graph_graph_hmm" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_hmm.cpp.stdout"
241: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
241: Test timeout computed to be: 10000000
test 242
        Start 242: test_demo_tutorial_graph_solution_1

242: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_graph_solution_1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/solution_1.cpp.stdout"
242: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
242: Test timeout computed to be: 10000000
236: Standard output was as expected.
236: Standard error was as expected.
237: Return code was 0.
237: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution2.cpp.stdout", "None".
237: Standard output was as expected.
237: Standard error was as expected.
239: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_graph_graph_algo_scc.
239: Return code was 0.
239: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_algo_scc.cpp.stdout", "None".
239: Standard output was as expected.
239: Standard error was as expected.
238: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution3.
238: Return code was 0.
238: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/gff_and_gtf_io/solution3.cpp.stdout", "None".
238: Standard output was as expected.
238: Standard error was as expected.
240: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_graph_graph_dijkstra.
240: Return code was 0.
240: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_dijkstra.cpp.stdout", "None".
240: Standard output was as expected.
240: Standard error was as expected.
106: StringTestCommon_Assign type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Assign type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Assign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Assign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Assign type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Assign type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Assign type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Assign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Assign type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Assign type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Assign type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Assign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Assign type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Assign type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Assign type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Assign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Assign type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Assign type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Assign type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Assign type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Assign type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Assign type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Assign type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Assign type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Assign type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Assign type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Assign type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Assign type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Assign type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Assign type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Assign type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Assign type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Assign type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Assign type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Assign type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Assign type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Assign type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
231/414 Test #236: test_demo_tutorial_gff_and_gtf_io_solution1 .......................................   Passed    0.14 sec
232/414 Test #237: test_demo_tutorial_gff_and_gtf_io_solution2 .......................................   Passed    0.13 sec
233/414 Test #238: test_demo_tutorial_gff_and_gtf_io_solution3 .......................................   Passed    0.11 sec
234/414 Test #239: test_demo_tutorial_graph_graph_algo_scc ...........................................   Passed    0.10 sec
235/414 Test #240: test_demo_tutorial_graph_graph_dijkstra ...........................................   Passed    0.10 sec
test 243
        Start 243: test_demo_tutorial_index_iterators_index_assignment1

243: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp.stdout"
243: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
243: Test timeout computed to be: 10000000
test 244
        Start 244: test_demo_tutorial_index_iterators_index_assignment2

244: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp.stdout"
244: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
244: Test timeout computed to be: 10000000
test 245
        Start 245: test_demo_tutorial_index_iterators_index_bidirectional_search

245: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_bidirectional_search" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp.stdout"
245: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
245: Test timeout computed to be: 10000000
test 246
        Start 246: test_demo_tutorial_index_iterators_index_preorder

246: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_preorder" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp.stdout"
246: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
246: Test timeout computed to be: 10000000
test 247
        Start 247: test_demo_tutorial_index_iterators_index_property_maps

247: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_property_maps" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_property_maps.cpp.stdout"
247: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
247: Test timeout computed to be: 10000000
106: StringTestCommon_OperatorAssign type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_OperatorAssign type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_OperatorAssign type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_OperatorAssign type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_OperatorAssign type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_OperatorAssign type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_OperatorAssign type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_OperatorAssign type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_OperatorAssign type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_OperatorAssign type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_OperatorAssign type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_OperatorAssign type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_OperatorAssign type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_OperatorAssign type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_OperatorAssign type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_OperatorAssign type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_OperatorAssign type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_OperatorAssign type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_OperatorAssign type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_OperatorAssign type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Swap type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Swap type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Swap type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Swap type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Swap type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Swap type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Swap type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Swap type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Swap type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Swap type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Swap type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Swap type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Swap type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Swap type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Swap type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Swap type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Swap type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Swap type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Swap type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Swap type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Swap type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Swap type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Swap type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Swap type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Swap type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Swap type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Swap type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Swap type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Swap type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Swap type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Swap type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Swap type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Swap type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Swap type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Swap type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Swap type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Swap type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Swap type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Swap type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Swap type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Swap type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Swap type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Swap type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Reverse type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reverse type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Reverse type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Reverse type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Reverse type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Reverse type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Reverse type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Reverse type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Reverse type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Reverse type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Reverse type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Reverse type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Reverse type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Reverse type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Reverse type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Reverse type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Reverse type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Reverse type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Reverse type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Reverse type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Reverse type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Reverse type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Reverse type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Reverse type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Reverse type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Reverse type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Reverse type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Reverse type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Reverse type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Reverse type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Reverse type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AssignValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_AssignValue type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_AssignValue type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_AssignValue type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_AssignValue type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_AssignValue type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_AssignValue type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_AssignValue type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_AssignValue type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_AssignValue type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_AssignValue type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_AssignValue type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_AssignValue type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_AssignValue type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_AssignValue type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_AssignValue type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_AssignValue type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_AssignValue type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_AssignValue type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_AssignValue type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Append type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Append type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Append type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Append type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Append type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Append type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
241: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_graph_graph_hmm.
241: Return code was 0.
241: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/graph_hmm.cpp.stdout", "None".
241: Standard output was as expected.
241: Standard error was as expected.
242: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_graph_solution_1.
242: Return code was 0.
242: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/graph/solution_1.cpp.stdout", "None".
242: Standard output was as expected.
242: Standard error was as expected.
243: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_assignment1.
243: Return code was 0.
243: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment1.cpp.stdout", "None".
243: Standard output was as expected.
243: Standard error was as expected.
236/414 Test #241: test_demo_tutorial_graph_graph_hmm ................................................   Passed    0.15 sec
237/414 Test #242: test_demo_tutorial_graph_solution_1 ...............................................   Passed    0.13 sec
test 248
        Start 248: test_demo_tutorial_index_iterators_index_search

248: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_search" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp.stdout"
248: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
248: Test timeout computed to be: 10000000
test 249
        Start 249: test_demo_tutorial_index_iterators_index_search2

249: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_search2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search2.cpp.stdout"
249: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
249: Test timeout computed to be: 10000000
106: StringTestCommon_Append type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
238/414 Test #243: test_demo_tutorial_index_iterators_index_assignment1 ..............................   Passed    0.14 sec
244: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_assignment2.
244: Return code was 0.
244: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_assignment2.cpp.stdout", "None".
244: Standard output was as expected.
244: Standard error was as expected.
245: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_bidirectional_search.
239/414 Test #244: test_demo_tutorial_index_iterators_index_assignment2 ..............................   Passed    0.12 sec
test 250
        Start 250: test_demo_tutorial_index_iterators_iterator_assignment2

250: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_assignment2.cpp.stdout"
250: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
250: Test timeout computed to be: 10000000
test 251
        Start 251: test_demo_tutorial_index_iterators_iterator_solution1

251: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp.stdout"
251: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
251: Test timeout computed to be: 10000000
106: StringTestCommon_Append type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Append type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Append type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Append type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Append type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Append type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Append type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Append type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Append type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Append type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Append type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Append type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Append type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Append type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Append type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Append type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Append type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Append type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Append type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Append type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Append type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Append type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Append type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Append type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Append type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Append type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Append type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Append type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Append type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Append type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Append type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Append type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Append type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Append type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Append type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Append type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
245: Return code was 0.
245: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_bidirectional_search.cpp.stdout", "None".
245: Standard output was as expected.
245: Standard error was as expected.
84: test_parallel_thread_pool_join OK
248: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_search.
248: Return code was 0.
248: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search.cpp.stdout", "None".
248: Standard output was as expected.
248: Standard error was as expected.
247: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_property_maps.
247: Return code was 0.
247: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_property_maps.cpp.stdout", "None".
247: Standard output was as expected.
247: Standard error was as expected.
246: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_preorder.
246: Return code was 0.
246: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_preorder.cpp.stdout", "None".
246: Standard output was as expected.
246: Standard error was as expected.
250: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_assignment2.
240/414 Test #245: test_demo_tutorial_index_iterators_index_bidirectional_search .....................   Passed    0.13 sec
241/414 Test #246: test_demo_tutorial_index_iterators_index_preorder .................................   Passed    0.11 sec
242/414 Test #248: test_demo_tutorial_index_iterators_index_search ...................................   Passed    0.07 sec
test 252
        Start 252: test_demo_tutorial_index_iterators_iterator_solution2

252: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp.stdout"
252: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
252: Test timeout computed to be: 10000000
test 253
        Start 253: test_demo_tutorial_index_iterators_iterator_solution3

253: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp.stdout"
253: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
253: Test timeout computed to be: 10000000
test 254
        Start 254: test_demo_tutorial_indexed_fasta_io_base

254: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/base.cpp.stdout"
254: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
254: Test timeout computed to be: 10000000
250: Return code was 0.
250: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_assignment2.cpp.stdout", "None".
250: Standard output was as expected.
250: Standard error was as expected.
249: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_index_search2.
249: Return code was 0.
249: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/index_search2.cpp.stdout", "None".
249: Standard output was as expected.
249: Standard error was as expected.
68: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexConfigLevelsPrefix<void, unsigned long> > > > OK
243/414 Test #247: test_demo_tutorial_index_iterators_index_property_maps ............................   Passed    0.15 sec
244/414 Test #249: test_demo_tutorial_index_iterators_index_search2 ..................................   Passed    0.12 sec
245/414 Test #250: test_demo_tutorial_index_iterators_iterator_assignment2 ...........................   Passed    0.10 sec
test 255
        Start 255: test_demo_tutorial_indexed_fasta_io_solution1

255: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution1.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution1.cpp.stderr"
255: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
255: Test timeout computed to be: 10000000
test 256
        Start 256: test_demo_tutorial_indexed_fasta_io_solution2

256: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution2.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution2.cpp.stderr"
256: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
256: Test timeout computed to be: 10000000
test 257
        Start 257: test_demo_tutorial_indices_assignment_1

257: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indices_assignment_1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_1.cpp.stdout"
257: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
257: Test timeout computed to be: 10000000
251: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution1.
251: Return code was 0.
251: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution1.cpp.stdout", "None".
251: Standard output was as expected.
251: Standard error was as expected.
252: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution2.
252: Return code was 0.
252: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution2.cpp.stdout", "None".
252: Standard output was as expected.
252: Standard error was as expected.
254: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_base.
254: Return code was 0.
254: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/base.cpp.stdout", "None".
254: Standard output was as expected.
254: Standard error was as expected.
106: StringTestCommon_AppendValue type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_AppendValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_AppendValue type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_AppendValue type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_AppendValue type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_AppendValue type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_AppendValue type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_AppendValue type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_AppendValue type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_AppendValue type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_AppendValue type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_AppendValue type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_AppendValue type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_AppendValue type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_AppendValue type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_AppendValue type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_AppendValue type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_AppendValue type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_AppendValue type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_AppendValue type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_AppendValue type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Back type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Back type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Back type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Back type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Back type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Back type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Back type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
246/414 Test #254: test_demo_tutorial_indexed_fasta_io_base ..........................................   Passed    0.07 sec
test 258
        Start 258: test_demo_tutorial_indices_assignment_2

258: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indices_assignment_2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_2.cpp.stdout"
258: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
258: Test timeout computed to be: 10000000
106: StringTestCommon_Back type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Back type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Back type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Back type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Back type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Back type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Back type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Back type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Back type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Back type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Back type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Back type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Back type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Back type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Back type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Back type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Back type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Back type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Back type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Back type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Back type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Back type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Back type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Back type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Back type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Back type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Back type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Back type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Back type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Back type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Back type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Back type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Back type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Back type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Back type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Back type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Begin type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Begin type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Begin type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Begin type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Begin type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Begin type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
253: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution3.
253: Return code was 0.
253: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/index_iterators/iterator_solution3.cpp.stdout", "None".
253: Standard output was as expected.
253: Standard error was as expected.
256: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_solution2.
256: Return code was 0.
256: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution2.cpp.stdout", "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution2.cpp.stderr".
247/414 Test #251: test_demo_tutorial_index_iterators_iterator_solution1 .............................   Passed    0.15 sec
248/414 Test #252: test_demo_tutorial_index_iterators_iterator_solution2 .............................   Passed    0.12 sec
249/414 Test #253: test_demo_tutorial_index_iterators_iterator_solution3 .............................   Passed    0.10 sec
test 259
        Start 259: test_demo_tutorial_indices_base

259: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indices_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp.stdout"
259: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
259: Test timeout computed to be: 10000000
test 260
        Start 260: test_demo_tutorial_iterators_assignment_1

260: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1.cpp.stdout"
260: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
260: Test timeout computed to be: 10000000
test 261
        Start 261: test_demo_tutorial_iterators_assignment_1_solution

261: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1_solution.cpp.stdout"
261: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
261: Test timeout computed to be: 10000000
106: StringTestCommon_Begin type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Begin type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Begin type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Begin type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Begin type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Begin type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Begin type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Begin type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Begin type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Begin type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Begin type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Begin type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Begin type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Begin type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Begin type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Begin type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Begin type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Begin type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Begin type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Begin type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Begin type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Begin type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Begin type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Begin type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Begin type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Begin type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Begin type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Begin type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Begin type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Begin type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Begin type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Begin type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Begin type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Begin type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Begin type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Begin type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Begin type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_BeginPosition type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_BeginPosition type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_BeginPosition type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_BeginPosition type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_BeginPosition type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_BeginPosition type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_BeginPosition type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_BeginPosition type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_BeginPosition type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_BeginPosition type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_BeginPosition type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_BeginPosition type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_BeginPosition type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_BeginPosition type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_BeginPosition type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_BeginPosition type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_BeginPosition type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_BeginPosition type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_BeginPosition type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Capacity type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Capacity type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Capacity type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Capacity type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Capacity type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Capacity type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Capacity type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Capacity type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Capacity type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Capacity type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Capacity type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Capacity type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Capacity type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Capacity type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Capacity type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Capacity type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Capacity type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Capacity type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Capacity type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Capacity type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Capacity type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Capacity type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Capacity type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Capacity type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Capacity type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Capacity type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Capacity type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Capacity type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Capacity type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Capacity type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Capacity type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Clear type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Clear type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Clear type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Clear type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Clear type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Clear type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Clear type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Clear type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Clear type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Clear type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Clear type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Clear type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Clear type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Clear type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Clear type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Clear type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Clear type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Clear type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Clear type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Clear type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Clear type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Clear type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Clear type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Clear type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Clear type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Clear type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Clear type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Clear type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Clear type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Clear type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Clear type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Clear type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Clear type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Clear type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Clear type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Clear type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Clear type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Clear type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Clear type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Clear type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Clear type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Clear type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Clear type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_End type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_End type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_End type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_End type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_End type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_End type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_End type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_End type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_End type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_End type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_End type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_End type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_End type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_End type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_End type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_End type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_End type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_End type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_End type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_End type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_End type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_End type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_End type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_End type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_End type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_End type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_End type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_End type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_End type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_End type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_End type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_End type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_End type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_End type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_End type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_End type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_End type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_End type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_End type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_End type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_End type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_End type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_End type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
256: Standard output was as expected.
256: Standard error was as expected.
255: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_solution1.
255: Return code was 0.
255: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution1.cpp.stdout", "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indexed_fasta_io/solution1.cpp.stderr".
255: Standard output was as expected.
255: Standard error was as expected.
258: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indices_assignment_2.
258: Return code was 0.
258: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_2.cpp.stdout", "None".
258: Standard output was as expected.
258: Standard error was as expected.
257: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indices_assignment_1.
250/414 Test #255: test_demo_tutorial_indexed_fasta_io_solution1 .....................................   Passed    0.11 sec
251/414 Test #256: test_demo_tutorial_indexed_fasta_io_solution2 .....................................   Passed    0.10 sec
test 262
        Start 262: test_demo_tutorial_iterators_assignment_2_solution

262: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_2_solution.cpp.stdout"
262: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
262: Test timeout computed to be: 10000000
test 263
        Start 263: test_demo_tutorial_iterators_assignment_3_workshop

263: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_3_workshop" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop.cpp.stdout"
263: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
263: Test timeout computed to be: 10000000
106: StringTestCommon_EndPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EndPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_EndPosition type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_EndPosition type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_EndPosition type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_EndPosition type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EndPosition type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_EndPosition type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_EndPosition type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EndPosition type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EndPosition type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_EndPosition type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_EndPosition type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EndPosition type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EndPosition type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_EndPosition type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_EndPosition type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EndPosition type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EndPosition type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_EndPosition type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_EndPosition type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Erase type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Erase type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Erase type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Erase type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Erase type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Erase type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Erase type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Erase type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Erase type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Erase type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Erase type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Erase type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Erase type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Erase type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Erase type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Erase type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Erase type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Erase type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Erase type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Erase type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Erase type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Erase type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Erase type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Erase type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Erase type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Erase type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Erase type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Erase type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Erase type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Erase type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Erase type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Erase type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Erase type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Erase type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Erase type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Erase type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Erase type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Erase type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Erase type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Erase type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Erase type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Erase type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Erase type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
257: Return code was 0.
257: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/assignment_1.cpp.stdout", "None".
257: Standard output was as expected.
257: Standard error was as expected.
252/414 Test #257: test_demo_tutorial_indices_assignment_1 ...........................................   Passed    0.11 sec
253/414 Test #258: test_demo_tutorial_indices_assignment_2 ...........................................   Passed    0.08 sec
test 264
        Start 264: test_demo_tutorial_iterators_assignment_3_workshop_solution

264: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_3_workshop_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop_solution.cpp.stdout"
264: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
264: Test timeout computed to be: 10000000
test 265
        Start 265: test_demo_tutorial_iterators_assignment_4_workshop_solution

265: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_4_workshop_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_4_workshop_solution.cpp.stdout"
265: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
265: Test timeout computed to be: 10000000
106: StringTestCommon_EraseBack type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
259: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_indices_base.
262: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_2_solution.
261: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_1_solution.
262: Return code was 0.
262: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_2_solution.cpp.stdout", "None".
106: StringTestCommon_EraseBack type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_EraseBack type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_EraseBack type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_EraseBack type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_EraseBack type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_EraseBack type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EraseBack type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_EraseBack type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_EraseBack type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EraseBack type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EraseBack type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_EraseBack type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_EraseBack type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EraseBack type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EraseBack type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_EraseBack type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_EraseBack type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_EraseBack type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_EraseBack type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_EraseBack type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_EraseBack type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
260: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_1.
259: Return code was 0.
259: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/indices/base.cpp.stdout", "None".
259: Standard output was as expected.
259: Standard error was as expected.
262: Standard output was as expected.
262: Standard error was as expected.
260: Return code was 0.
260: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1.cpp.stdout", "None".
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<char, seqan::Array<100ul> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<int, seqan::Array<100ul> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<char, seqan::Alloc<void> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<int, seqan::Alloc<void> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::vector<char, std::allocator<char> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::vector<int, std::allocator<int> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::deque<char, std::allocator<char> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::deque<int, std::allocator<int> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::forward_list<char, std::allocator<char> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::forward_list<int, std::allocator<int> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: 1398
106: 1400
106: StringTestCommon_Front type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_GetValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<char, seqan::Array<100ul> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<int, seqan::Array<100ul> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<CountingChar, seqan::Array<100ul> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<char, seqan::Block<4096ul> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<int, seqan::Block<4096ul> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<CountingChar, seqan::Block<4096ul> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<char, seqan::Alloc<void> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<int, seqan::Alloc<void> > SKIPPED
106: StringTestCommon_GetValue type parameter seqan::String<CountingChar, seqan::Alloc<void> > SKIPPED
106: StringTestCommon_GetValue type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > SKIPPED
106: StringTestCommon_GetValue type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > SKIPPED
106: StringTestCommon_GetValue type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > SKIPPED
106: StringTestCommon_GetValue type parameter std::vector<char, std::allocator<char> > SKIPPED
106: StringTestCommon_GetValue type parameter std::vector<int, std::allocator<int> > SKIPPED
106: StringTestCommon_GetValue type parameter std::vector<CountingChar, std::allocator<CountingChar> > SKIPPED
106: StringTestCommon_GetValue type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > SKIPPED
106: StringTestCommon_GetValue type parameter std::deque<char, std::allocator<char> > SKIPPED
106: StringTestCommon_GetValue type parameter std::deque<int, std::allocator<int> > SKIPPED
106: StringTestCommon_GetValue type parameter std::deque<CountingChar, std::allocator<CountingChar> > SKIPPED
106: StringTestCommon_GetValue type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > SKIPPED
106: StringTestCommon_GetValue type parameter std::forward_list<char, std::allocator<char> > SKIPPED
106: StringTestCommon_GetValue type parameter std::forward_list<int, std::allocator<int> > SKIPPED
106: StringTestCommon_GetValue type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > SKIPPED
106: StringTestCommon_GetValue type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > SKIPPED
106: StringTestCommon_GetValue type parameter std::__cxx11::list<char, std::allocator<char> > SKIPPED
106: StringTestCommon_GetValue type parameter std::__cxx11::list<int, std::allocator<int> > SKIPPED
106: StringTestCommon_GetValue type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > SKIPPED
106: StringTestCommon_Insert type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Insert type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Insert type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Insert type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
260: Standard output was as expected.
260: Standard error was as expected.
106: StringTestCommon_Insert type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
261: Return code was 0.
261: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_1_solution.cpp.stdout", "None".
254/414 Test #262: test_demo_tutorial_iterators_assignment_2_solution ................................   Passed    0.06 sec
test 266
        Start 266: test_demo_tutorial_iterators_base

266: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/base.cpp.stdout"
266: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
266: Test timeout computed to be: 10000000
261: Standard output was as expected.
261: Standard error was as expected.
106: StringTestCommon_Insert type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Insert type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
255/414 Test #259: test_demo_tutorial_indices_base ...................................................   Passed    0.12 sec
256/414 Test #260: test_demo_tutorial_iterators_assignment_1 .........................................   Passed    0.11 sec
257/414 Test #261: test_demo_tutorial_iterators_assignment_1_solution ................................   Passed    0.09 sec
test 267
        Start 267: test_demo_tutorial_iterators_sequence_iterator_demo

267: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_sequence_iterator_demo" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/sequence_iterator_demo.cpp.stdout"
267: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
267: Test timeout computed to be: 10000000
test 268
        Start 268: test_demo_tutorial_journaled_set_base

268: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/base.cpp.stdout"
268: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
268: Test timeout computed to be: 10000000
test 269
        Start 269: test_demo_tutorial_journaled_set_example_join

269: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_example_join" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_join.cpp.stdout"
269: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
269: Test timeout computed to be: 10000000
106: StringTestCommon_Insert type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Insert type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Insert type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Insert type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Insert type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Insert type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Insert type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Insert type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Insert type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Insert type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Insert type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Insert type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Insert type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Insert type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Insert type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Insert type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Insert type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Insert type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Insert type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Insert type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Insert type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Insert type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Insert type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Insert type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Insert type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Insert type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Insert type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Insert type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Insert type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Insert type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Insert type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Insert type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Insert type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Insert type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Insert type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Insert type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
264: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_3_workshop_solution.
264: Return code was 0.
264: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop_solution.cpp.stdout", "None".
264: Standard output was as expected.
264: Standard error was as expected.
265: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_4_workshop_solution.
263: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_assignment_3_workshop.
266: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_base.
106: StringTestCommon_InsertValue type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_InsertValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_InsertValue type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_InsertValue type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_InsertValue type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_InsertValue type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_InsertValue type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_InsertValue type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_InsertValue type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_InsertValue type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_InsertValue type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_InsertValue type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_InsertValue type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_InsertValue type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_InsertValue type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_InsertValue type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_InsertValue type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_InsertValue type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_InsertValue type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_InsertValue type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_InsertValue type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Iter type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Iter type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Iter type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Iter type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
265: Return code was 0.
265: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_4_workshop_solution.cpp.stdout", "None".
258/414 Test #264: test_demo_tutorial_iterators_assignment_3_workshop_solution .......................   Passed    0.11 sec
test 270
        Start 270: test_demo_tutorial_journaled_set_example_journal_string_basic

270: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_example_journal_string_basic" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_journal_string_basic.cpp.stdout"
270: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
270: Test timeout computed to be: 10000000
265: Standard output was as expected.
265: Standard error was as expected.
263: Return code was 0.
263: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/assignment_3_workshop.cpp.stdout", "None".
263: Standard output was as expected.
263: Standard error was as expected.
106: StringTestCommon_Iter type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
266: Return code was 0.
266: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/base.cpp.stdout", "None".
259/414 Test #263: test_demo_tutorial_iterators_assignment_3_workshop ................................   Passed    0.14 sec
260/414 Test #265: test_demo_tutorial_iterators_assignment_4_workshop_solution .......................   Passed    0.11 sec
test 271
        Start 271: test_demo_tutorial_journaled_set_example_online_search

271: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_example_online_search" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp.stdout"
271: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
271: Test timeout computed to be: 10000000
test 272
        Start 272: test_demo_tutorial_journaled_set_example_online_search_assignment1_hint

272: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_example_online_search_assignment1_hint" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.stdout"
272: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
272: Test timeout computed to be: 10000000
106: StringTestCommon_Iter type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Iter type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Iter type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Iter type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Iter type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Iter type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Iter type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Iter type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Iter type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Iter type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Iter type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Iter type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Iter type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Iter type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Iter type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Iter type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Iter type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Iter type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Iter type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Iter type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Iter type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Iter type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Iter type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Iter type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Iter type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Iter type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Iter type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Iter type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Iter type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Iter type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Iter type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Iter type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Iter type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Iter type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Iter type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Iter type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Iter type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Iter type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Length type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Length type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Length type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Length type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Length type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Length type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Length type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Length type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Length type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Length type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Length type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Length type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Length type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Length type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Length type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Length type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Length type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Length type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Length type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Length type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Length type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Length type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Length type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Length type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Length type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Length type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Length type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Length type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Length type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Length type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Length type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Length type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Length type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Length type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Length type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Length type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Length type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Length type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Length type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Length type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Length type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Length type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Length type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_MoveValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_MoveValue type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_MoveValue type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_MoveValue type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_MoveValue type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_MoveValue type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_MoveValue type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_MoveValue type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_MoveValue type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_MoveValue type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_MoveValue type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_MoveValue type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_MoveValue type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_MoveValue type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_MoveValue type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_MoveValue type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_MoveValue type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_MoveValue type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_MoveValue type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_MoveValue type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Replace type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Replace type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Replace type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Replace type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
266: Standard output was as expected.
266: Standard error was as expected.
269: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_example_join.
269: Return code was 0.
269: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_join.cpp.stdout", "None".
269: Standard output was as expected.
269: Standard error was as expected.
267: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_iterators_sequence_iterator_demo.
261/414 Test #266: test_demo_tutorial_iterators_base .................................................   Passed    0.12 sec
262/414 Test #269: test_demo_tutorial_journaled_set_example_join .....................................   Passed    0.07 sec
test 273
        Start 273: test_demo_tutorial_journaled_set_solution_online_search_assignment1

273: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp.stdout"
273: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
273: Test timeout computed to be: 10000000
test 274
        Start 274: test_demo_tutorial_journaled_set_solution_online_search_assignment2

274: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp.stdout"
274: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
274: Test timeout computed to be: 10000000
106: StringTestCommon_Replace type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Replace type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
267: Return code was 0.
267: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/iterators/sequence_iterator_demo.cpp.stdout", "None".
270: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_example_journal_string_basic.
270: Return code was 0.
270: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_journal_string_basic.cpp.stdout", "None".
270: Standard output was as expected.
270: Standard error was as expected.
268: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_base.
268: Return code was 0.
268: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/base.cpp.stdout", "None".
268: Standard output was as expected.
268: Standard error was as expected.
263/414 Test #270: test_demo_tutorial_journaled_set_example_journal_string_basic .....................   Passed    0.08 sec
test 275
        Start 275: test_demo_tutorial_journaled_set_solution_online_search_assignment3

275: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp.stdout"
275: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
275: Test timeout computed to be: 10000000
267: Standard output was as expected.
267: Standard error was as expected.
264/414 Test #268: test_demo_tutorial_journaled_set_base .............................................   Passed    0.13 sec
test 276
        Start 276: test_demo_tutorial_journaled_set_solution_online_search_assignment4

276: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment4" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp.stdout"
276: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
276: Test timeout computed to be: 10000000
106: StringTestCommon_Replace type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
271: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_example_online_search.
272: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_example_online_search_assignment1_hint.
274: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment2.
265/414 Test #267: test_demo_tutorial_iterators_sequence_iterator_demo ...............................   Passed    0.17 sec
test 277
        Start 277: test_demo_tutorial_journaled_string_tree_journaled_string_tree_base

277: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.stdout"
277: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
277: Test timeout computed to be: 10000000
272: Return code was 0.
272: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.stdout", "None".
272: Standard output was as expected.
272: Standard error was as expected.
273: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment1.
106: StringTestCommon_Replace type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Replace type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Replace type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Replace type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Replace type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Replace type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Replace type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Replace type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Replace type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Replace type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Replace type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Replace type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Replace type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Replace type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Replace type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Replace type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Replace type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Replace type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Replace type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Replace type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Replace type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Replace type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Replace type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Replace type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Replace type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Replace type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Replace type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Replace type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Replace type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Replace type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Replace type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Replace type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Replace type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Replace type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Replace type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Replace type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Reserve type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Reserve type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Reserve type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Reserve type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Reserve type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Reserve type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Reserve type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Reserve type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Reserve type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Reserve type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Reserve type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Reserve type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Reserve type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Reserve type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Reserve type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Reserve type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Reserve type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Reserve type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Reserve type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Reserve type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Reserve type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Reserve type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Reserve type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Reserve type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Reserve type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Reserve type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Reserve type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Reserve type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Reserve type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Reserve type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Reserve type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Resize type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Resize type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Resize type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Resize type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
266/414 Test #272: test_demo_tutorial_journaled_set_example_online_search_assignment1_hint ...........   Passed    0.10 sec
test 278
        Start 278: test_demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1

278: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.stdout"
278: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
278: Test timeout computed to be: 10000000
106: StringTestCommon_Resize type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Resize type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Resize type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Resize type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Resize type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Resize type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Resize type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Resize type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Resize type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Resize type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Resize type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Resize type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Resize type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Resize type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Resize type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Resize type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Resize type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Resize type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Resize type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Resize type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Resize type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Resize type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Resize type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Resize type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Resize type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Resize type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Resize type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Resize type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Resize type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Resize type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Resize type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Resize type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Resize type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Resize type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Resize type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Resize type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Resize type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Resize type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Resize type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Value type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Value type parameter seqan::String<char, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Value type parameter seqan::String<int, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Value type parameter seqan::String<CountingChar, seqan::External<seqan::ExternalConfigLarge<seqan::File<seqan::Async<void> >, 4194304u, 2u> > > OK
106: StringTestCommon_Value type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Value type parameter seqan::String<char, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Value type parameter seqan::String<int, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Value type parameter seqan::String<CountingChar, seqan::MMap<seqan::MMapConfig<seqan::File<seqan::Async<void> >, unsigned long> > > OK
106: StringTestCommon_Value type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Value type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Value type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Value type parameter seqan::String<char, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Value type parameter seqan::String<int, seqan::Packed<seqan::Alloc<void> > > OK
106: StringTestCommon_Value type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Array<100ul> > OK
106: StringTestCommon_Value type parameter seqan::String<char, seqan::Array<100ul> > OK
106: StringTestCommon_Value type parameter seqan::String<int, seqan::Array<100ul> > OK
106: StringTestCommon_Value type parameter seqan::String<CountingChar, seqan::Array<100ul> > OK
106: StringTestCommon_Value type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Block<4096ul> > OK
106: StringTestCommon_Value type parameter seqan::String<char, seqan::Block<4096ul> > OK
106: StringTestCommon_Value type parameter seqan::String<int, seqan::Block<4096ul> > OK
106: StringTestCommon_Value type parameter seqan::String<CountingChar, seqan::Block<4096ul> > OK
106: StringTestCommon_Value type parameter seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> > OK
106: StringTestCommon_Value type parameter seqan::String<char, seqan::Alloc<void> > OK
106: StringTestCommon_Value type parameter seqan::String<int, seqan::Alloc<void> > OK
106: StringTestCommon_Value type parameter seqan::String<CountingChar, seqan::Alloc<void> > OK
106: StringTestCommon_Value type parameter std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > OK
106: StringTestCommon_Value type parameter std::__cxx11::basic_string<int, std::char_traits<int>, std::allocator<int> > OK
106: StringTestCommon_Value type parameter std::vector<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Value type parameter std::vector<char, std::allocator<char> > OK
106: StringTestCommon_Value type parameter std::vector<int, std::allocator<int> > OK
106: StringTestCommon_Value type parameter std::vector<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Value type parameter std::deque<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Value type parameter std::deque<char, std::allocator<char> > OK
106: StringTestCommon_Value type parameter std::deque<int, std::allocator<int> > OK
106: StringTestCommon_Value type parameter std::deque<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Value type parameter std::forward_list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Value type parameter std::forward_list<char, std::allocator<char> > OK
106: StringTestCommon_Value type parameter std::forward_list<int, std::allocator<int> > OK
106: StringTestCommon_Value type parameter std::forward_list<CountingChar, std::allocator<CountingChar> > OK
106: StringTestCommon_Value type parameter std::__cxx11::list<seqan::SimpleType<unsigned char, seqan::Dna5_>, std::allocator<seqan::SimpleType<unsigned char, seqan::Dna5_> > > OK
106: StringTestCommon_Value type parameter std::__cxx11::list<char, std::allocator<char> > OK
106: StringTestCommon_Value type parameter std::__cxx11::list<int, std::allocator<int> > OK
106: StringTestCommon_Value type parameter std::__cxx11::list<CountingChar, std::allocator<CountingChar> > OK
106: **************************************
106:  Total Tests: 1505
106:  Skipped:     43
106:  Errors:      0
106: **************************************
275: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment3.
276: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment4.
267/414 Test #106: test_test_sequence_v2 .............................................................   Passed    3.86 sec
test 279
        Start 279: test_demo_tutorial_metafunctions_assignment1_solution

279: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_metafunctions_assignment1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/metafunctions/assignment1_solution.cpp.stdout"
279: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
279: Test timeout computed to be: 10000000
277: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base.
279: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_metafunctions_assignment1_solution.
279: Return code was 0.
279: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/metafunctions/assignment1_solution.cpp.stdout", "None".
279: Standard output was as expected.
279: Standard error was as expected.
278: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.
275: Return code was 0.
275: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp.stdout", "None".
275: Standard output was as expected.
275: Standard error was as expected.
268/414 Test #275: test_demo_tutorial_journaled_set_solution_online_search_assignment3 ...............   Passed    0.16 sec
test 280
        Start 280: test_demo_tutorial_metafunctions_base

280: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_metafunctions_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/metafunctions/base.cpp.stdout"
280: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
280: Test timeout computed to be: 10000000
269/414 Test #279: test_demo_tutorial_metafunctions_assignment1_solution .............................   Passed    0.10 sec
test 281
        Start 281: test_demo_tutorial_modifiers_UNUSED_modcomplementdna

281: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_UNUSED_modcomplementdna" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/UNUSED_modcomplementdna.cpp.stdout"
281: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
281: Test timeout computed to be: 10000000
274: Return code was 0.
274: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp.stdout", "None".
274: Standard output was as expected.
274: Standard error was as expected.
270/414 Test #274: test_demo_tutorial_journaled_set_solution_online_search_assignment2 ...............   Passed    0.20 sec
test 282
        Start 282: test_demo_tutorial_modifiers_assignment1

282: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1.cpp.stdout"
282: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
282: Test timeout computed to be: 10000000
280: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_metafunctions_base.
280: Return code was 0.
280: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/metafunctions/base.cpp.stdout", "None".
280: Standard output was as expected.
280: Standard error was as expected.
277: Return code was 0.
277: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.stdout", "None".
277: Standard output was as expected.
277: Standard error was as expected.
271/414 Test #277: test_demo_tutorial_journaled_string_tree_journaled_string_tree_base ...............   Passed    0.16 sec
test 283
        Start 283: test_demo_tutorial_modifiers_assignment1_solution

283: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_assignment1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1_solution.cpp.stdout"
283: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
283: Test timeout computed to be: 10000000
272/414 Test #280: test_demo_tutorial_metafunctions_base .............................................   Passed    0.06 sec
test 284
        Start 284: test_demo_tutorial_modifiers_modreverse

284: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_modreverse" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modreverse.cpp.stdout"
284: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
284: Test timeout computed to be: 10000000
273: Return code was 0.
273: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp.stdout", "None".
273: Standard output was as expected.
273: Standard error was as expected.
282: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_assignment1.
273/414 Test #273: test_demo_tutorial_journaled_set_solution_online_search_assignment1 ...............   Passed    0.27 sec
test 285
        Start 285: test_demo_tutorial_modifiers_modview

285: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_modview" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modview.cpp.stdout"
285: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
285: Test timeout computed to be: 10000000
282: Return code was 0.
282: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1.cpp.stdout", "None".
282: Standard output was as expected.
282: Standard error was as expected.
271: Return code was 0.
271: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/example_online_search.cpp.stdout", "None".
271: Standard output was as expected.
271: Standard error was as expected.
281: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_UNUSED_modcomplementdna.
281: Return code was 0.
281: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/UNUSED_modcomplementdna.cpp.stdout", "None".
281: Standard output was as expected.
281: Standard error was as expected.
278: Return code was 0.
278: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.stdout", "None".
278: Standard output was as expected.
278: Standard error was as expected.
283: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_assignment1_solution.
283: Return code was 0.
283: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/assignment1_solution.cpp.stdout", "None".
283: Standard output was as expected.
283: Standard error was as expected.
274/414 Test #271: test_demo_tutorial_journaled_set_example_online_search ............................   Passed    0.33 sec
275/414 Test #278: test_demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1 ...   Passed    0.21 sec
276/414 Test #282: test_demo_tutorial_modifiers_assignment1 ..........................................   Passed    0.08 sec
277/414 Test #283: test_demo_tutorial_modifiers_assignment1_solution .................................   Passed    0.06 sec
test 286
        Start 286: test_demo_tutorial_modifiers_nested

286: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_nested" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/nested.cpp.stdout"
286: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
286: Test timeout computed to be: 10000000
test 287
        Start 287: test_demo_tutorial_multiple_sequence_alignment_assignment1

287: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/assignment1.cpp.stdout"
287: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
287: Test timeout computed to be: 10000000
test 288
        Start 288: test_demo_tutorial_multiple_sequence_alignment_consensus

288: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_consensus" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/consensus.cpp.stdout"
288: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
288: Test timeout computed to be: 10000000
test 289
        Start 289: test_demo_tutorial_multiple_sequence_alignment_msa

289: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_msa" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/msa.cpp.stdout"
289: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
289: Test timeout computed to be: 10000000
276: Return code was 0.
276: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp.stdout", "None".
276: Standard output was as expected.
276: Standard error was as expected.
278/414 Test #276: test_demo_tutorial_journaled_set_solution_online_search_assignment4 ...............   Passed    0.29 sec
279/414 Test #281: test_demo_tutorial_modifiers_UNUSED_modcomplementdna ..............................   Passed    0.13 sec
test 290
        Start 290: test_demo_tutorial_pairwise_sequence_alignment_alignment_banded

290: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_banded" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.stdout"
290: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
290: Test timeout computed to be: 10000000
test 291
        Start 291: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1

291: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.stdout"
291: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
291: Test timeout computed to be: 10000000
288: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_consensus.
285: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_modview.
285: Return code was 0.
285: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modview.cpp.stdout", "None".
285: Standard output was as expected.
285: Standard error was as expected.
286: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_nested.
286: Return code was 0.
286: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/nested.cpp.stdout", "None".
286: Standard output was as expected.
286: Standard error was as expected.
287: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_assignment1.
289: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_msa.
284: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_modifiers_modreverse.
280/414 Test #286: test_demo_tutorial_modifiers_nested ...............................................   Passed    0.06 sec
test 292
        Start 292: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2

292: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.stdout"
292: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
292: Test timeout computed to be: 10000000
288: Return code was 0.
288: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/consensus.cpp.stdout", "None".
289: Return code was 0.
289: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/msa.cpp.stdout", "None".
289: Standard output was as expected.
289: Standard error was as expected.
281/414 Test #285: test_demo_tutorial_modifiers_modview ..............................................   Passed    0.11 sec
test 293
        Start 293: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3

293: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.stdout"
293: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
293: Test timeout computed to be: 10000000
288: Standard output was as expected.
288: Standard error was as expected.
284: Return code was 0.
284: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/modifiers/modreverse.cpp.stdout", "None".
284: Standard output was as expected.
284: Standard error was as expected.
287: Return code was 0.
287: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/multiple_sequence_alignment/assignment1.cpp.stdout", "None".
287: Standard output was as expected.
287: Standard error was as expected.
282/414 Test #288: test_demo_tutorial_multiple_sequence_alignment_consensus ..........................   Passed    0.08 sec
283/414 Test #289: test_demo_tutorial_multiple_sequence_alignment_msa ................................   Passed    0.08 sec
test 294
        Start 294: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap

294: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.stdout"
294: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
294: Test timeout computed to be: 10000000
test 295
        Start 295: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised

295: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.stdout"
295: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
295: Test timeout computed to be: 10000000
292: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.
290: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_banded.
290: Return code was 0.
290: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.stdout", "None".
284/414 Test #284: test_demo_tutorial_modifiers_modreverse ...........................................   Passed    0.16 sec
285/414 Test #287: test_demo_tutorial_multiple_sequence_alignment_assignment1 ........................   Passed    0.11 sec
test 296
        Start 296: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_standard

296: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.stdout"
296: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
296: Test timeout computed to be: 10000000
test 297
        Start 297: test_demo_tutorial_pairwise_sequence_alignment_alignment_local

297: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_local" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp.stdout"
297: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
297: Test timeout computed to be: 10000000
292: Return code was 0.
292: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.stdout", "None".
292: Standard output was as expected.
292: Standard error was as expected.
290: Standard output was as expected.
290: Standard error was as expected.
295: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.
295: Return code was 0.
295: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.stdout", "None".
295: Standard output was as expected.
295: Standard error was as expected.
294: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.
286/414 Test #290: test_demo_tutorial_pairwise_sequence_alignment_alignment_banded ...................   Passed    0.12 sec
287/414 Test #292: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2 .......   Passed    0.09 sec
288/414 Test #295: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised .......   Passed    0.05 sec
test 298
        Start 298: test_demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1

298: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.stdout"
298: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
298: Test timeout computed to be: 10000000
test 299
        Start 299: test_demo_tutorial_pairwise_sequence_alignment_assignment5

299: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp.stdout"
299: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
299: Test timeout computed to be: 10000000
test 300
        Start 300: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step1

300: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.stdout"
300: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
300: Test timeout computed to be: 10000000
294: Return code was 0.
294: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.stdout", "None".
294: Standard output was as expected.
294: Standard error was as expected.
293: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.
293: Return code was 0.
293: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.stdout", "None".
293: Standard output was as expected.
293: Standard error was as expected.
291: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.
291: Return code was 0.
291: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.stdout", "None".
291: Standard output was as expected.
291: Standard error was as expected.
296: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.
296: Return code was 0.
296: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.stdout", "None".
296: Standard output was as expected.
296: Standard error was as expected.
298: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.
298: Return code was 0.
298: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.stdout", "None".
298: Standard output was as expected.
298: Standard error was as expected.
289/414 Test #293: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3 .......   Passed    0.13 sec
290/414 Test #294: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap ...........   Passed    0.11 sec
test 301
        Start 301: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step2

301: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.stdout"
301: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
301: Test timeout computed to be: 10000000
test 302
        Start 302: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step3

302: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.stdout"
302: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
302: Test timeout computed to be: 10000000
291/414 Test #298: test_demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1 ........   Passed    0.07 sec
299: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5.
299: Return code was 0.
299: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp.stdout", "None".
299: Standard output was as expected.
299: Standard error was as expected.
297: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_local.
300: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.
292/414 Test #291: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1 .......   Passed    0.17 sec
293/414 Test #296: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_standard ..........   Passed    0.11 sec
test 303
        Start 303: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step4

303: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step4" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.stdout"
303: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
303: Test timeout computed to be: 10000000
test 304
        Start 304: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step5

304: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step5" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.stdout"
304: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
304: Test timeout computed to be: 10000000
test 305
        Start 305: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step6

305: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step6" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.stdout"
305: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
305: Test timeout computed to be: 10000000
297: Return code was 0.
297: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp.stdout", "None".
297: Standard output was as expected.
297: Standard error was as expected.
300: Return code was 0.
300: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.stdout", "None".
300: Standard output was as expected.
300: Standard error was as expected.
301: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.
301: Return code was 0.
301: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.stdout", "None".
301: Standard output was as expected.
301: Standard error was as expected.
294/414 Test #297: test_demo_tutorial_pairwise_sequence_alignment_alignment_local ....................   Passed    0.14 sec
295/414 Test #299: test_demo_tutorial_pairwise_sequence_alignment_assignment5 ........................   Passed    0.11 sec
296/414 Test #300: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step1 ..................   Passed    0.09 sec
297/414 Test #301: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step2 ..................   Passed    0.06 sec
test 306
        Start 306: test_demo_tutorial_parsing_command_line_arguments_base

306: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_parsing_command_line_arguments_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/base.cpp.stdout"
306: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
306: Test timeout computed to be: 10000000
test 307
        Start 307: test_demo_tutorial_pattern_matching_assignment1

307: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1.cpp.stdout"
307: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
307: Test timeout computed to be: 10000000
test 308
        Start 308: test_demo_tutorial_pattern_matching_assignment1_solution

308: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1_solution.cpp.stdout"
308: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
308: Test timeout computed to be: 10000000
test 309
        Start 309: test_demo_tutorial_pattern_matching_assignment2

309: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2.cpp.stdout"
309: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
309: Test timeout computed to be: 10000000
302: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.
302: Return code was 0.
302: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.stdout", "None".
302: Standard output was as expected.
302: Standard error was as expected.
303: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.
303: Return code was 0.
303: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.stdout", "None".
303: Standard output was as expected.
303: Standard error was as expected.
304: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.
305: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.
298/414 Test #302: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step3 ..................   Passed    0.11 sec
299/414 Test #303: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step4 ..................   Passed    0.10 sec
test 310
        Start 310: test_demo_tutorial_pattern_matching_assignment2_solution

310: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2_solution.cpp.stdout"
310: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
310: Test timeout computed to be: 10000000
test 311
        Start 311: test_demo_tutorial_pattern_matching_assignment3

311: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3.cpp.stdout"
311: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
311: Test timeout computed to be: 10000000
304: Return code was 0.
304: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.stdout", "None".
304: Standard output was as expected.
304: Standard error was as expected.
305: Return code was 0.
305: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.stdout", "None".
305: Standard output was as expected.
305: Standard error was as expected.
306: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_parsing_command_line_arguments_base.
306: Return code was 0.
306: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/parsing_command_line_arguments/base.cpp.stdout", "None".
306: Standard output was as expected.
306: Standard error was as expected.
307: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment1.
300/414 Test #304: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step5 ..................   Passed    0.10 sec
301/414 Test #305: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step6 ..................   Passed    0.10 sec
test 312
        Start 312: test_demo_tutorial_pattern_matching_assignment3_solution

312: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment3_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3_solution.cpp.stdout"
312: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
312: Test timeout computed to be: 10000000
test 313
        Start 313: test_demo_tutorial_pattern_matching_find_approx

313: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_find_approx" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_approx.cpp.stdout"
313: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
313: Test timeout computed to be: 10000000
302/414 Test #306: test_demo_tutorial_parsing_command_line_arguments_base ............................   Passed    0.11 sec
307: Return code was 0.
307: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1.cpp.stdout", "None".
307: Standard output was as expected.
307: Standard error was as expected.
310: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment2_solution.
310: Return code was 0.
310: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2_solution.cpp.stdout", "None".
310: Standard output was as expected.
310: Standard error was as expected.
309: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment2.
309: Return code was 0.
309: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment2.cpp.stdout", "None".
309: Standard output was as expected.
309: Standard error was as expected.
303/414 Test #307: test_demo_tutorial_pattern_matching_assignment1 ...................................   Passed    0.10 sec
test 314
        Start 314: test_demo_tutorial_pattern_matching_find_exact

314: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_find_exact" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_exact.cpp.stdout"
314: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
314: Test timeout computed to be: 10000000
test 315
        Start 315: test_demo_tutorial_pattern_matching_find_index

315: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_find_index" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index.cpp.stdout"
315: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
315: Test timeout computed to be: 10000000
308: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment1_solution.
308: Return code was 0.
308: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment1_solution.cpp.stdout", "None".
308: Standard output was as expected.
308: Standard error was as expected.
311: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment3.
304/414 Test #308: test_demo_tutorial_pattern_matching_assignment1_solution ..........................   Passed    0.12 sec
305/414 Test #309: test_demo_tutorial_pattern_matching_assignment2 ...................................   Passed    0.10 sec
306/414 Test #310: test_demo_tutorial_pattern_matching_assignment2_solution ..........................   Passed    0.09 sec
test 316
        Start 316: test_demo_tutorial_pattern_matching_find_index_multiple

316: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_find_index_multiple" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp.stdout"
316: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
316: Test timeout computed to be: 10000000
test 317
        Start 317: test_demo_tutorial_q_gram_index_index_assignment5

317: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_q_gram_index_index_assignment5" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment5.cpp.stdout"
317: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
317: Test timeout computed to be: 10000000
test 318
        Start 318: test_demo_tutorial_q_gram_index_index_assignment6

318: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_q_gram_index_index_assignment6" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment6.cpp.stdout"
318: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
318: Test timeout computed to be: 10000000
311: Return code was 0.
311: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3.cpp.stdout", "None".
311: Standard output was as expected.
311: Standard error was as expected.
312: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment3_solution.
312: Return code was 0.
312: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/assignment3_solution.cpp.stdout", "None".
312: Standard output was as expected.
312: Standard error was as expected.
313: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_find_approx.
313: Return code was 0.
313: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_approx.cpp.stdout", "None".
313: Standard output was as expected.
313: Standard error was as expected.
314: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_find_exact.
314: Return code was 0.
314: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_exact.cpp.stdout", "None".
314: Standard output was as expected.
314: Standard error was as expected.
307/414 Test #311: test_demo_tutorial_pattern_matching_assignment3 ...................................   Passed    0.13 sec
308/414 Test #312: test_demo_tutorial_pattern_matching_assignment3_solution ..........................   Passed    0.11 sec
test 319
        Start 319: test_demo_tutorial_q_gram_index_index_qgram

319: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_q_gram_index_index_qgram" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram.cpp.stdout"
319: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
319: Test timeout computed to be: 10000000
test 320
        Start 320: test_demo_tutorial_q_gram_index_index_qgram_hash

320: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_q_gram_index_index_qgram_hash" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram_hash.cpp.stdout"
320: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
320: Test timeout computed to be: 10000000
309/414 Test #314: test_demo_tutorial_pattern_matching_find_exact ....................................   Passed    0.10 sec
317: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_q_gram_index_index_assignment5.
317: Return code was 0.
317: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment5.cpp.stdout", "None".
317: Standard output was as expected.
317: Standard error was as expected.
315: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_find_index.
316: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_pattern_matching_find_index_multiple.
310/414 Test #313: test_demo_tutorial_pattern_matching_find_approx ...................................   Passed    0.12 sec
test 321
        Start 321: test_demo_tutorial_realignment_step1

321: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_realignment_step1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp.stdout"
321: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
321: Test timeout computed to be: 10000000
test 322
        Start 322: test_demo_tutorial_realignment_step2

322: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_realignment_step2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp.stdout"
322: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
322: Test timeout computed to be: 10000000
315: Return code was 0.
315: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index.cpp.stdout", "None".
315: Standard output was as expected.
315: Standard error was as expected.
316: Return code was 0.
316: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/pattern_matching/find_index_multiple.cpp.stdout", "None".
316: Standard output was as expected.
316: Standard error was as expected.
318: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_q_gram_index_index_assignment6.
318: Return code was 0.
318: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_assignment6.cpp.stdout", "None".
318: Standard output was as expected.
318: Standard error was as expected.
319: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_q_gram_index_index_qgram.
311/414 Test #315: test_demo_tutorial_pattern_matching_find_index ....................................   Passed    0.12 sec
312/414 Test #317: test_demo_tutorial_q_gram_index_index_assignment5 .................................   Passed    0.09 sec
313/414 Test #318: test_demo_tutorial_q_gram_index_index_assignment6 .................................   Passed    0.07 sec
test 323
        Start 323: test_demo_tutorial_sam_and_bam_io_base

323: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/base.cpp.stdout"
323: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
323: Test timeout computed to be: 10000000
test 324
        Start 324: test_demo_tutorial_sam_and_bam_io_example1

324: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example1.cpp.stdout"
324: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
324: Test timeout computed to be: 10000000
test 325
        Start 325: test_demo_tutorial_sam_and_bam_io_example2

325: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example2.cpp.stdout"
325: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
325: Test timeout computed to be: 10000000
319: Return code was 0.
319: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram.cpp.stdout", "None".
319: Standard output was as expected.
319: Standard error was as expected.
320: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_q_gram_index_index_qgram_hash.
320: Return code was 0.
320: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/q_gram_index/index_qgram_hash.cpp.stdout", "None".
320: Standard output was as expected.
320: Standard error was as expected.
68: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexConfigLevelsPrefix<void, unsigned long> > > > OK
321: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_realignment_step1.
322: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_realignment_step2.
314/414 Test #316: test_demo_tutorial_pattern_matching_find_index_multiple ...........................   Passed    0.15 sec
315/414 Test #319: test_demo_tutorial_q_gram_index_index_qgram .......................................   Passed    0.11 sec
316/414 Test #320: test_demo_tutorial_q_gram_index_index_qgram_hash ..................................   Passed    0.10 sec
test 326
        Start 326: test_demo_tutorial_sam_and_bam_io_example7

326: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example7" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example7.cpp.stdout"
326: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
326: Test timeout computed to be: 10000000
test 327
        Start 327: test_demo_tutorial_sam_and_bam_io_solution1

327: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution1.cpp.stdout"
327: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
327: Test timeout computed to be: 10000000
test 328
        Start 328: test_demo_tutorial_sam_and_bam_io_solution2

328: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution2.cpp.stdout"
328: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
328: Test timeout computed to be: 10000000
321: Return code was 0.
321: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step1.cpp.stdout", "None".
321: Standard output was as expected.
321: Standard error was as expected.
323: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_base.
323: Return code was 0.
323: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/base.cpp.stdout", "None".
323: Standard output was as expected.
323: Standard error was as expected.
325: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example2.
325: Return code was 0.
325: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example2.cpp.stdout", "None".
325: Standard output was as expected.
325: Standard error was as expected.
317/414 Test #321: test_demo_tutorial_realignment_step1 ..............................................   Passed    0.15 sec
318/414 Test #323: test_demo_tutorial_sam_and_bam_io_base ............................................   Passed    0.12 sec
test 329
        Start 329: test_demo_tutorial_sam_and_bam_io_solution3

329: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution3.cpp.stdout"
329: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
329: Test timeout computed to be: 10000000
test 330
        Start 330: test_demo_tutorial_seed_and_extend_example1

330: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example1.cpp.stdout"
330: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
330: Test timeout computed to be: 10000000
327: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution1.
327: Return code was 0.
327: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution1.cpp.stdout", "None".
327: Standard output was as expected.
327: Standard error was as expected.
326: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example7.
326: Return code was 0.
326: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example7.cpp.stdout", "None".
324: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example1.
324: Return code was 0.
324: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/example1.cpp.stdout", "None".
324: Standard output was as expected.
324: Standard error was as expected.
328: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution2.
328: Return code was 0.
328: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution2.cpp.stdout", "None".
328: Standard output was as expected.
328: Standard error was as expected.
319/414 Test #325: test_demo_tutorial_sam_and_bam_io_example2 ........................................   Passed    0.12 sec
320/414 Test #327: test_demo_tutorial_sam_and_bam_io_solution1 .......................................   Passed    0.09 sec
test 331
        Start 331: test_demo_tutorial_seed_and_extend_example2

331: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example2.cpp.stdout"
331: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
331: Test timeout computed to be: 10000000
test 332
        Start 332: test_demo_tutorial_seed_and_extend_example3

332: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example3.cpp.stdout"
332: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
332: Test timeout computed to be: 10000000
326: Standard output was as expected.
326: Standard error was as expected.
321/414 Test #324: test_demo_tutorial_sam_and_bam_io_example1 ........................................   Passed    0.17 sec
322/414 Test #326: test_demo_tutorial_sam_and_bam_io_example7 ........................................   Passed    0.14 sec
323/414 Test #328: test_demo_tutorial_sam_and_bam_io_solution2 .......................................   Passed    0.12 sec
test 333
        Start 333: test_demo_tutorial_seed_and_extend_example4

333: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example4" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example4.cpp.stdout"
333: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
333: Test timeout computed to be: 10000000
test 334
        Start 334: test_demo_tutorial_seed_and_extend_example5

334: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example5" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example5.cpp.stdout"
334: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
334: Test timeout computed to be: 10000000
test 335
        Start 335: test_demo_tutorial_seed_and_extend_example6

335: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example6" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example6.cpp.stdout"
335: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
335: Test timeout computed to be: 10000000
331: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example2.
330: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example1.
322: Return code was 0.
322: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/realignment/step2.cpp.stdout", "None".
322: Standard output was as expected.
322: Standard error was as expected.
330: Return code was 0.
330: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example1.cpp.stdout", "None".
330: Standard output was as expected.
330: Standard error was as expected.
324/414 Test #322: test_demo_tutorial_realignment_step2 ..............................................   Passed    0.29 sec
test 336
        Start 336: test_demo_tutorial_seed_and_extend_example7

336: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example7" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp.stdout"
336: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
336: Test timeout computed to be: 10000000
331: Return code was 0.
331: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example2.cpp.stdout", "None".
331: Standard output was as expected.
331: Standard error was as expected.
325/414 Test #330: test_demo_tutorial_seed_and_extend_example1 .......................................   Passed    0.15 sec
326/414 Test #331: test_demo_tutorial_seed_and_extend_example2 .......................................   Passed    0.12 sec
test 337
        Start 337: test_demo_tutorial_seed_and_extend_solution1

337: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution1.cpp.stdout"
337: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
337: Test timeout computed to be: 10000000
test 338
        Start 338: test_demo_tutorial_seed_and_extend_solution2

338: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution2.cpp.stdout"
338: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
338: Test timeout computed to be: 10000000
329: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution3.
329: Return code was 0.
329: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sam_and_bam_io/solution3.cpp.stdout", "None".
329: Standard output was as expected.
329: Standard error was as expected.
332: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example3.
332: Return code was 0.
332: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example3.cpp.stdout", "None".
332: Standard output was as expected.
332: Standard error was as expected.
334: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example5.
327/414 Test #329: test_demo_tutorial_sam_and_bam_io_solution3 .......................................   Passed    0.20 sec
test 339
        Start 339: test_demo_tutorial_seed_and_extend_solution3

339: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution3.cpp.stdout"
339: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
339: Test timeout computed to be: 10000000
334: Return code was 0.
334: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example5.cpp.stdout", "None".
334: Standard output was as expected.
334: Standard error was as expected.
336: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example7.
336: Return code was 0.
336: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example7.cpp.stdout", "None".
336: Standard output was as expected.
336: Standard error was as expected.
337: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution1.
335: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example6.
328/414 Test #332: test_demo_tutorial_seed_and_extend_example3 .......................................   Passed    0.18 sec
test 340
        Start 340: test_demo_tutorial_seed_and_extend_solution4

340: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution4" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution4.cpp.stdout"
340: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
340: Test timeout computed to be: 10000000
335: Return code was 0.
335: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example6.cpp.stdout", "None".
335: Standard output was as expected.
335: Standard error was as expected.
329/414 Test #334: test_demo_tutorial_seed_and_extend_example5 .......................................   Passed    0.16 sec
330/414 Test #336: test_demo_tutorial_seed_and_extend_example7 .......................................   Passed    0.10 sec
test 341
        Start 341: test_demo_tutorial_seed_and_extend_solution5

341: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution5" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution5.cpp.stdout"
341: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
341: Test timeout computed to be: 10000000
test 342
        Start 342: test_demo_tutorial_seed_and_extend_solution6

342: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution6" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp.stdout"
342: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
342: Test timeout computed to be: 10000000
337: Return code was 0.
337: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution1.cpp.stdout", "None".
337: Standard output was as expected.
337: Standard error was as expected.
331/414 Test #335: test_demo_tutorial_seed_and_extend_example6 .......................................   Passed    0.16 sec
332/414 Test #337: test_demo_tutorial_seed_and_extend_solution1 ......................................   Passed    0.10 sec
test 343
        Start 343: test_demo_tutorial_seeds_example1

343: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seeds_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seeds/example1.cpp.stdout"
343: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
343: Test timeout computed to be: 10000000
test 344
        Start 344: test_demo_tutorial_sequence_io_base

344: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/base.cpp.stdout"
344: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
344: Test timeout computed to be: 10000000
342: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution6.
342: Return code was 0.
342: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution6.cpp.stdout", "None".
342: Standard output was as expected.
342: Standard error was as expected.
333: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_example4.
340: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution4.
333/414 Test #342: test_demo_tutorial_seed_and_extend_solution6 ......................................   Passed    0.05 sec
test 345
        Start 345: test_demo_tutorial_sequence_io_example1

345: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/example1.cpp.stdout"
345: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
345: Test timeout computed to be: 10000000
333: Return code was 0.
333: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/example4.cpp.stdout", "None".
333: Standard output was as expected.
333: Standard error was as expected.
340: Return code was 0.
340: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution4.cpp.stdout", "None".
341: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution5.
340: Standard output was as expected.
340: Standard error was as expected.
341: Return code was 0.
341: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution5.cpp.stdout", "None".
341: Standard output was as expected.
341: Standard error was as expected.
334/414 Test #340: test_demo_tutorial_seed_and_extend_solution4 ......................................   Passed    0.09 sec
test 346
        Start 346: test_demo_tutorial_sequence_io_solution1

346: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution1.cpp.stdout"
346: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
346: Test timeout computed to be: 10000000
335/414 Test #341: test_demo_tutorial_seed_and_extend_solution5 ......................................   Passed    0.08 sec
test 347
        Start 347: test_demo_tutorial_sequence_io_solution2

347: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution2.cpp.stdout"
347: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
347: Test timeout computed to be: 10000000
343: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seeds_example1.
344: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_base.
345: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_example1.
343: Return code was 0.
343: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seeds/example1.cpp.stdout", "None".
343: Standard output was as expected.
343: Standard error was as expected.
344: Return code was 0.
344: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/base.cpp.stdout", "None".
344: Standard output was as expected.
344: Standard error was as expected.
336/414 Test #333: test_demo_tutorial_seed_and_extend_example4 .......................................   Passed    0.29 sec
test 348
        Start 348: test_demo_tutorial_sequence_io_solution3

348: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution3.cpp.stdout"
348: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
348: Test timeout computed to be: 10000000
345: Return code was 0.
345: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/example1.cpp.stdout", "None".
345: Standard output was as expected.
345: Standard error was as expected.
347: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_solution2.
337/414 Test #343: test_demo_tutorial_seeds_example1 .................................................   Passed    0.12 sec
338/414 Test #344: test_demo_tutorial_sequence_io_base ...............................................   Passed    0.08 sec
339/414 Test #345: test_demo_tutorial_sequence_io_example1 ...........................................   Passed    0.07 sec
test 349
        Start 349: test_demo_tutorial_sequence_io_solution4

349: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_solution4" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution4.cpp.stdout"
349: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
349: Test timeout computed to be: 10000000
test 350
        Start 350: test_demo_tutorial_sequences_assignment_1_solution

350: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_1_solution.cpp.stdout"
350: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
350: Test timeout computed to be: 10000000
test 351
        Start 351: test_demo_tutorial_sequences_assignment_2_solution

351: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_2_solution.cpp.stdout"
351: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
351: Test timeout computed to be: 10000000
347: Return code was 0.
347: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution2.cpp.stdout", "None".
347: Standard output was as expected.
347: Standard error was as expected.
338: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution2.
340/414 Test #347: test_demo_tutorial_sequence_io_solution2 ..........................................   Passed    0.08 sec
test 352
        Start 352: test_demo_tutorial_sequences_assignment_3_solution

352: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_3_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_3_solution.cpp.stdout"
352: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
352: Test timeout computed to be: 10000000
338: Return code was 0.
338: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution2.cpp.stdout", "None".
338: Standard output was as expected.
338: Standard error was as expected.
350: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_1_solution.
350: Return code was 0.
350: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_1_solution.cpp.stdout", "None".
350: Standard output was as expected.
350: Standard error was as expected.
346: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_solution1.
339: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution3.
339: Return code was 0.
339: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/seed_and_extend/solution3.cpp.stdout", "None".
339: Standard output was as expected.
339: Standard error was as expected.
348: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_solution3.
348: Return code was 0.
348: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution3.cpp.stdout", "None".
348: Standard output was as expected.
348: Standard error was as expected.
349: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequence_io_solution4.
349: Return code was 0.
349: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution4.cpp.stdout", "None".
349: Standard output was as expected.
349: Standard error was as expected.
341/414 Test #338: test_demo_tutorial_seed_and_extend_solution2 ......................................   Passed    0.28 sec
342/414 Test #350: test_demo_tutorial_sequences_assignment_1_solution ................................   Passed    0.06 sec
test 353
        Start 353: test_demo_tutorial_sequences_assignment_4_solution

353: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_4_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_4_solution.cpp.stdout"
353: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
353: Test timeout computed to be: 10000000
test 354
        Start 354: test_demo_tutorial_sequences_assignment_5_solution

354: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_5_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_5_solution.cpp.stdout"
354: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
354: Test timeout computed to be: 10000000
346: Return code was 0.
346: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequence_io/solution1.cpp.stdout", "None".
346: Standard output was as expected.
346: Standard error was as expected.
351: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_2_solution.
351: Return code was 0.
351: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_2_solution.cpp.stdout", "None".
351: Standard output was as expected.
351: Standard error was as expected.
343/414 Test #339: test_demo_tutorial_seed_and_extend_solution3 ......................................   Passed    0.30 sec
344/414 Test #346: test_demo_tutorial_sequence_io_solution1 ..........................................   Passed    0.18 sec
345/414 Test #348: test_demo_tutorial_sequence_io_solution3 ..........................................   Passed    0.14 sec
346/414 Test #349: test_demo_tutorial_sequence_io_solution4 ..........................................   Passed    0.12 sec
347/414 Test #351: test_demo_tutorial_sequences_assignment_2_solution ................................   Passed    0.10 sec
test 355
        Start 355: test_demo_tutorial_sequences_assignment_6_solution

355: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_6_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_6_solution.cpp.stdout"
355: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
355: Test timeout computed to be: 10000000
test 356
        Start 356: test_demo_tutorial_sequences_example_comparisons

356: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_comparisons" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_comparisons.cpp.stdout"
356: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
356: Test timeout computed to be: 10000000
test 357
        Start 357: test_demo_tutorial_sequences_example_conversions_copy

357: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_conversions_copy" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_copy.cpp.stdout"
357: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
357: Test timeout computed to be: 10000000
test 358
        Start 358: test_demo_tutorial_sequences_example_conversions_move

358: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_conversions_move" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_move.cpp.stdout"
358: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
358: Test timeout computed to be: 10000000
test 359
        Start 359: test_demo_tutorial_sequences_example_functionality1

359: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_functionality1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality1.cpp.stdout"
359: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
359: Test timeout computed to be: 10000000
353: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_4_solution.
353: Return code was 0.
353: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_4_solution.cpp.stdout", "None".
353: Standard output was as expected.
353: Standard error was as expected.
352: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_3_solution.
352: Return code was 0.
352: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_3_solution.cpp.stdout", "None".
354: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_5_solution.
354: Return code was 0.
354: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_5_solution.cpp.stdout", "None".
354: Standard output was as expected.
354: Standard error was as expected.
355: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_assignment_6_solution.
355: Return code was 0.
355: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/assignment_6_solution.cpp.stdout", "None".
355: Standard output was as expected.
355: Standard error was as expected.
348/414 Test #355: test_demo_tutorial_sequences_assignment_6_solution ................................   Passed    0.09 sec
test 360
        Start 360: test_demo_tutorial_sequences_example_functionality2

360: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_functionality2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality2.cpp.stdout"
360: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
360: Test timeout computed to be: 10000000
352: Standard output was as expected.
352: Standard error was as expected.
349/414 Test #354: test_demo_tutorial_sequences_assignment_5_solution ................................   Passed    0.14 sec
test 361
        Start 361: test_demo_tutorial_sequences_example_segments

361: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_segments" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_segments.cpp.stdout"
361: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
361: Test timeout computed to be: 10000000
350/414 Test #353: test_demo_tutorial_sequences_assignment_4_solution ................................   Passed    0.16 sec
test 362
        Start 362: test_demo_tutorial_sequences_in_depth_assignment_exact_generous_solution

362: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.stdout"
362: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
362: Test timeout computed to be: 10000000
358: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_conversions_move.
351/414 Test #352: test_demo_tutorial_sequences_assignment_3_solution ................................   Passed    0.21 sec
test 363
        Start 363: test_demo_tutorial_sequences_in_depth_base

363: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_in_depth_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/base.cpp.stdout"
363: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
363: Test timeout computed to be: 10000000
358: Return code was 0.
358: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_move.cpp.stdout", "None".
358: Standard output was as expected.
358: Standard error was as expected.
352/414 Test #358: test_demo_tutorial_sequences_example_conversions_move .............................   Passed    0.10 sec
test 364
        Start 364: test_demo_tutorial_sequences_in_depth_example_overflow

364: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_in_depth_example_overflow" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/example_overflow.cpp.stdout"
364: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
364: Test timeout computed to be: 10000000
360: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_functionality2.
357: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_conversions_copy.
361: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_segments.
357: Return code was 0.
357: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_conversions_copy.cpp.stdout", "None".
356: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_comparisons.
357: Standard output was as expected.
357: Standard error was as expected.
359: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_example_functionality1.
362: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.
359: Return code was 0.
359: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality1.cpp.stdout", "None".
361: Return code was 0.
361: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_segments.cpp.stdout", "None".
361: Standard output was as expected.
361: Standard error was as expected.
360: Return code was 0.
360: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_functionality2.cpp.stdout", "None".
360: Standard output was as expected.
360: Standard error was as expected.
356: Return code was 0.
356: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences/example_comparisons.cpp.stdout", "None".
356: Standard output was as expected.
356: Standard error was as expected.
359: Standard output was as expected.
359: Standard error was as expected.
353/414 Test #357: test_demo_tutorial_sequences_example_conversions_copy .............................   Passed    0.16 sec
test 365
        Start 365: test_demo_tutorial_simple_rna_seq_base

365: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/base.cpp.stdout"
365: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
365: Test timeout computed to be: 10000000
354/414 Test #359: test_demo_tutorial_sequences_example_functionality1 ...............................   Passed    0.14 sec
355/414 Test #360: test_demo_tutorial_sequences_example_functionality2 ...............................   Passed    0.10 sec
test 366
        Start 366: test_demo_tutorial_simple_rna_seq_genequant_assignment1

366: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment1.cpp.stdout"
366: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
366: Test timeout computed to be: 10000000
test 367
        Start 367: test_demo_tutorial_simple_rna_seq_genequant_assignment2

367: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp.stdout"
367: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
367: Test timeout computed to be: 10000000
363: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_in_depth_base.
363: Return code was 0.
363: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/base.cpp.stdout", "None".
363: Standard output was as expected.
363: Standard error was as expected.
364: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_sequences_in_depth_example_overflow.
84: test_parallel_thread_pool_destruct OK
84: test_parallel_enumerable_thread_local_construct OK
356/414 Test #356: test_demo_tutorial_sequences_example_comparisons ..................................   Passed    0.21 sec
357/414 Test #361: test_demo_tutorial_sequences_example_segments .....................................   Passed    0.11 sec
test 368
        Start 368: test_demo_tutorial_simple_rna_seq_genequant_assignment3

368: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp.stdout"
368: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
368: Test timeout computed to be: 10000000
test 369
        Start 369: test_demo_tutorial_simple_rna_seq_genequant_assignment4

369: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment4" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp.stdout"
369: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
369: Test timeout computed to be: 10000000
364: Return code was 0.
364: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/example_overflow.cpp.stdout", "None".
364: Standard output was as expected.
364: Standard error was as expected.
84: test_parallel_enumerable_thread_local_local OK
365: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_base.
365: Return code was 0.
365: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/base.cpp.stdout", "None".
365: Standard output was as expected.
365: Standard error was as expected.
358/414 Test #363: test_demo_tutorial_sequences_in_depth_base ........................................   Passed    0.11 sec
359/414 Test #364: test_demo_tutorial_sequences_in_depth_example_overflow ............................   Passed    0.10 sec
test 370
        Start 370: test_demo_tutorial_simple_rna_seq_genequant_assignment5

370: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment5" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp.stdout"
370: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
370: Test timeout computed to be: 10000000
test 371
        Start 371: test_demo_tutorial_simple_rna_seq_genequant_solution1

371: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp.stdout"
371: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
371: Test timeout computed to be: 10000000
84: test_parallel_enumerable_thread_local_enumerate OK
366: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment1.
366: Return code was 0.
366: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment1.cpp.stdout", "None".
366: Standard output was as expected.
366: Standard error was as expected.
360/414 Test #365: test_demo_tutorial_simple_rna_seq_base ............................................   Passed    0.08 sec
361/414 Test #366: test_demo_tutorial_simple_rna_seq_genequant_assignment1 ...........................   Passed    0.07 sec
test 372
        Start 372: test_demo_tutorial_simple_rna_seq_genequant_solution2

372: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp.stdout"
372: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
372: Test timeout computed to be: 10000000
test 373
        Start 373: test_demo_tutorial_simple_rna_seq_genequant_solution3

373: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp.stdout"
373: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
373: Test timeout computed to be: 10000000
84: test_parallel_enumerable_thread_local_combine_unary OK
367: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment2.
367: Return code was 0.
367: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp.stdout", "None".
367: Standard output was as expected.
367: Standard error was as expected.
368: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment3.
368: Return code was 0.
368: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp.stdout", "None".
369: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment4.
362/414 Test #367: test_demo_tutorial_simple_rna_seq_genequant_assignment2 ...........................   Passed    0.08 sec
test 374
        Start 374: test_demo_tutorial_simple_rna_seq_genequant_solution4

374: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution4" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp.stdout"
374: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
374: Test timeout computed to be: 10000000
84: test_parallel_enumerable_thread_local_combine_binary OK
84: **************************************
84:  Total Tests: 29
84:  Skipped:     0
84:  Errors:      0
84: **************************************
368: Standard output was as expected.
368: Standard error was as expected.
370: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment5.
363/414 Test  #84: test_test_parallel ................................................................   Passed    6.44 sec
364/414 Test #368: test_demo_tutorial_simple_rna_seq_genequant_assignment3 ...........................   Passed    0.09 sec
test 375
        Start 375: test_demo_tutorial_simple_rna_seq_genequant_solution5

375: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution5" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp.stdout"
375: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
375: Test timeout computed to be: 10000000
test 376
        Start 376: test_demo_tutorial_simple_rna_seq_interval_tree

376: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_interval_tree" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/interval_tree.cpp.stdout"
376: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
376: Test timeout computed to be: 10000000
371: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution1.
371: Return code was 0.
371: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution1.cpp.stdout", "None".
371: Standard output was as expected.
371: Standard error was as expected.
373: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution3.
374: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution4.
365/414 Test #371: test_demo_tutorial_simple_rna_seq_genequant_solution1 .............................   Passed    0.10 sec
test 377
        Start 377: test_demo_tutorial_string_sets_assignment_1_solution

377: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_1_solution.cpp.stdout"
377: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
377: Test timeout computed to be: 10000000
372: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution2.
369: Return code was 0.
369: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp.stdout", "None".
369: Standard output was as expected.
369: Standard error was as expected.
370: Return code was 0.
370: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp.stdout", "None".
370: Standard output was as expected.
370: Standard error was as expected.
372: Return code was 0.
372: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution2.cpp.stdout", "None".
366/414 Test #369: test_demo_tutorial_simple_rna_seq_genequant_assignment4 ...........................   Passed    0.19 sec
test 378
        Start 378: test_demo_tutorial_string_sets_assignment_2

378: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2.cpp.stdout"
378: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
378: Test timeout computed to be: 10000000
372: Standard output was as expected.
372: Standard error was as expected.
367/414 Test #370: test_demo_tutorial_simple_rna_seq_genequant_assignment5 ...........................   Passed    0.19 sec
test 379
        Start 379: test_demo_tutorial_string_sets_assignment_2_solution

379: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2_solution.cpp.stdout"
379: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
379: Test timeout computed to be: 10000000
376: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_interval_tree.
368/414 Test #372: test_demo_tutorial_simple_rna_seq_genequant_solution2 .............................   Passed    0.18 sec
test 380
        Start 380: test_demo_tutorial_string_sets_assignment_3_workshop_solution

380: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_3_workshop_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_3_workshop_solution.cpp.stdout"
380: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
380: Test timeout computed to be: 10000000
362: Return code was 0.
362: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.stdout", "None".
362: Standard output was as expected.
362: Standard error was as expected.
375: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution5.
373: Return code was 0.
373: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution3.cpp.stdout", "None".
373: Standard output was as expected.
373: Standard error was as expected.
377: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_1_solution.
377: Return code was 0.
377: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_1_solution.cpp.stdout", "None".
377: Standard output was as expected.
377: Standard error was as expected.
376: Return code was 0.
376: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/interval_tree.cpp.stdout", "None".
376: Standard output was as expected.
376: Standard error was as expected.
378: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_2.
378: Return code was 0.
378: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2.cpp.stdout", "None".
378: Standard output was as expected.
378: Standard error was as expected.
374: Return code was 0.
374: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution4.cpp.stdout", "None".
374: Standard output was as expected.
374: Standard error was as expected.
369/414 Test #362: test_demo_tutorial_sequences_in_depth_assignment_exact_generous_solution ..........   Passed    0.42 sec
370/414 Test #373: test_demo_tutorial_simple_rna_seq_genequant_solution3 .............................   Passed    0.25 sec
371/414 Test #376: test_demo_tutorial_simple_rna_seq_interval_tree ...................................   Passed    0.21 sec
372/414 Test #377: test_demo_tutorial_string_sets_assignment_1_solution ..............................   Passed    0.18 sec
373/414 Test #378: test_demo_tutorial_string_sets_assignment_2 .......................................   Passed    0.11 sec
test 381
        Start 381: test_demo_tutorial_string_sets_assignment_4_workshop_solution

381: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_4_workshop_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_4_workshop_solution.cpp.stdout"
381: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
381: Test timeout computed to be: 10000000
test 382
        Start 382: test_demo_tutorial_string_sets_example_functionality

382: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_example_functionality" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality.cpp.stdout"
382: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
382: Test timeout computed to be: 10000000
test 383
        Start 383: test_demo_tutorial_string_sets_example_functionality_2

383: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_example_functionality_2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality_2.cpp.stdout"
383: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
383: Test timeout computed to be: 10000000
test 384
        Start 384: test_demo_tutorial_string_sets_example_iterators

384: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_example_iterators" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_iterators.cpp.stdout"
384: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
384: Test timeout computed to be: 10000000
test 385
        Start 385: test_demo_tutorial_vcf_io_base

385: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/base.cpp.stdout"
385: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
385: Test timeout computed to be: 10000000
375: Return code was 0.
375: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/simple_rna_seq/genequant_solution5.cpp.stdout", "None".
375: Standard output was as expected.
375: Standard error was as expected.
374/414 Test #374: test_demo_tutorial_simple_rna_seq_genequant_solution4 .............................   Passed    0.29 sec
379: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_2_solution.
379: Return code was 0.
379: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_2_solution.cpp.stdout", "None".
379: Standard output was as expected.
379: Standard error was as expected.
380: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_3_workshop_solution.
380: Return code was 0.
380: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_3_workshop_solution.cpp.stdout", "None".
380: Standard output was as expected.
380: Standard error was as expected.
381: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_assignment_4_workshop_solution.
382: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_example_functionality.
375/414 Test #379: test_demo_tutorial_string_sets_assignment_2_solution ..............................   Passed    0.15 sec
test 386
        Start 386: test_demo_tutorial_vcf_io_example1

386: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/example1.cpp.stdout"
386: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
386: Test timeout computed to be: 10000000
test 387
        Start 387: test_demo_tutorial_vcf_io_solution1

387: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution1.cpp.stdout"
387: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
387: Test timeout computed to be: 10000000
376/414 Test #380: test_demo_tutorial_string_sets_assignment_3_workshop_solution .....................   Passed    0.15 sec
381: Return code was 0.
381: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/assignment_4_workshop_solution.cpp.stdout", "None".
381: Standard output was as expected.
381: Standard error was as expected.
382: Return code was 0.
382: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality.cpp.stdout", "None".
382: Standard output was as expected.
382: Standard error was as expected.
384: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_example_iterators.
383: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_string_sets_example_functionality_2.
377/414 Test #375: test_demo_tutorial_simple_rna_seq_genequant_solution5 .............................   Passed    0.29 sec
378/414 Test #381: test_demo_tutorial_string_sets_assignment_4_workshop_solution .....................   Passed    0.07 sec
test 388
        Start 388: test_demo_tutorial_vcf_io_solution2

388: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution2.cpp.stdout"
388: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
388: Test timeout computed to be: 10000000
test 389
        Start 389: test_demo_tutorial_vcf_io_solution3

389: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution3.cpp.stdout"
389: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/demos
389: Test timeout computed to be: 10000000
test 390
        Start 390: app_test_bs_tools

390: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
390: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/bs_tools
390: Test timeout computed to be: 10000000
384: Return code was 0.
384: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_iterators.cpp.stdout", "None".
384: Standard output was as expected.
384: Standard error was as expected.
383: Return code was 0.
383: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/string_sets/example_functionality_2.cpp.stdout", "None".
383: Standard output was as expected.
383: Standard error was as expected.
68: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan::Index<seqan::String<bool, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<void, unsigned long> > > > OK
385: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_base.
385: Return code was 0.
385: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/base.cpp.stdout", "None".
385: Standard output was as expected.
385: Standard error was as expected.
386: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_example1.
379/414 Test #382: test_demo_tutorial_string_sets_example_functionality ..............................   Passed    0.11 sec
380/414 Test #383: test_demo_tutorial_string_sets_example_functionality_2 ............................   Passed    0.10 sec
381/414 Test #384: test_demo_tutorial_string_sets_example_iterators ..................................   Passed    0.10 sec
382/414 Test #385: test_demo_tutorial_vcf_io_base ....................................................   Passed    0.08 sec
test 391
        Start 391: app_test_dfi

391: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/dfi/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
391: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/dfi
391: Test timeout computed to be: 10000000
test 392
        Start 392: app_test_fiona

392: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
392: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/fiona
392: Test timeout computed to be: 10000000
test 393
        Start 393: app_test_gustaf

393: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
393: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/gustaf
393: Test timeout computed to be: 10000000
test 394
        Start 394: app_test_insegt

394: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
394: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/insegt
394: Test timeout computed to be: 10000000
386: Return code was 0.
386: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/example1.cpp.stdout", "None".
386: Standard output was as expected.
386: Standard error was as expected.
388: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_solution2.
388: Return code was 0.
388: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution2.cpp.stdout", "None".
388: Standard output was as expected.
388: Standard error was as expected.
387: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_solution1.
387: Return code was 0.
387: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution1.cpp.stdout", "None".
387: Standard output was as expected.
387: Standard error was as expected.
389: Running /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_vcf_io_solution3.
383/414 Test #386: test_demo_tutorial_vcf_io_example1 ................................................   Passed    0.12 sec
384/414 Test #388: test_demo_tutorial_vcf_io_solution2 ...............................................   Passed    0.09 sec
test 395
        Start 395: app_test_micro_razers

395: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
395: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/micro_razers
395: Test timeout computed to be: 10000000
test 396
        Start 396: app_test_ngs_roi

396: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
396: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/ngs_roi
396: Test timeout computed to be: 10000000
389: Return code was 0.
389: Loading files "/build/reproducible-path/seqan2-2.4.0+dfsg/demos/tutorial/vcf_io/solution3.cpp.stdout", "None".
389: Standard output was as expected.
389: Standard error was as expected.
385/414 Test #387: test_demo_tutorial_vcf_io_solution1 ...............................................   Passed    0.13 sec
386/414 Test #389: test_demo_tutorial_vcf_io_solution3 ...............................................   Passed    0.10 sec
test 397
        Start 397: app_test_pair_align

397: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
397: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/pair_align
397: Test timeout computed to be: 10000000
test 398
        Start 398: test_test_funcs_param_chooser

398: Test command: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/test_funcs_param_chooser
398: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/param_chooser
398: Test timeout computed to be: 10000000
398: TEST SUITE test_param_chooser
398: SEQAN_ENABLE_DEBUG == 1
398: SEQAN_ENABLE_TESTING == 1
398: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET"
398: SEQAN_ASYNC_IO == 1
398: test_param_chooser_quality_distribution_from_prb_file OK
398: test_param_chooser_quality_distribution_from_fastq_file OK
398: test_param_chooser_parse_gapped_params OK
398: test_param_parse_shapes_from_file OK
398: **************************************
398:  Total Tests: 4
398:  Skipped:     0
398:  Errors:      0
398: **************************************
387/414 Test #398: test_test_funcs_param_chooser .....................................................   Passed    0.04 sec
test 399
        Start 399: app_test_rabema

399: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
399: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/rabema
399: Test timeout computed to be: 10000000
68: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<void, unsigned long> > > > OK
394: DELETING TEMP DIR /tmp/tmpbgfgtxa3
394: Executing test for insegt
394: =========================
394: 
394: insegt -ro /tmp/tmpbgfgtxa3/default_readOutput.gff -ao /tmp/tmpbgfgtxa3/default_annoOutput.gff -to /tmp/tmpbgfgtxa3/default_tupleOutput.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/annotations.gff OK
394: insegt -c 2 -ro /tmp/tmpbgfgtxa3/threshold-count2_readOutput.gff -ao /tmp/tmpbgfgtxa3/threshold-count2_annoOutput.gff -to /tmp/tmpbgfgtxa3/threshold-count2_tupleOutput.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/annotations.gff OK
394: insegt -n 3 -ro /tmp/tmpbgfgtxa3/ntuple3_readOutput.gff -ao /tmp/tmpbgfgtxa3/ntuple3_annoOutput.gff -to /tmp/tmpbgfgtxa3/ntuple3_tupleOutput.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/annotations.gff OK
394: insegt -m -ro /tmp/tmpbgfgtxa3/max-tuple_readOutput.gff -ao /tmp/tmpbgfgtxa3/max-tuple_annoOutput.gff -to /tmp/tmpbgfgtxa3/max-tuple_tupleOutput.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/annotations.gff OK
394: insegt -e -ro /tmp/tmpbgfgtxa3/exact-ntuple_readOutput.gff -ao /tmp/tmpbgfgtxa3/exact-ntuple_annoOutput.gff -to /tmp/tmpbgfgtxa3/exact-ntuple_tupleOutput.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/insegt/tests/annotations.gff OK
394: ==============================
394:      total tests: 5
394:     failed tests: 0
394: successful tests: 5
394: ==============================
388/414 Test #394: app_test_insegt ...................................................................   Passed    1.21 sec
test 400
        Start 400: app_test_razers

400: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
400: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers
400: Test timeout computed to be: 10000000
393: DELETING TEMP DIR /tmp/tmpfxil8y49
393: Executing test for gustaf
393: ===============================
393: 
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno_modified_reads_mates1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno_modified_reads_mates2.fa -o /tmp/tmpfxil8y49/adeno_modified_reads_joinedMates.fa -rc OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/reads_simulated_mates1_gold.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/reads_simulated_mates2_gold.fa -o /tmp/tmpfxil8y49/reads_simulated_joined_rc.fa -rc OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/reads_simulated_mates1_gold.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/reads_simulated_mates2_gold.fa -o /tmp/tmpfxil8y49/reads_simulated_joined.fa OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/reads_simulated_joined_gold.fa -o /tmp/tmpfxil8y49/reads_simulated_mates1_rc.fa -o /tmp/tmpfxil8y49/reads_simulated_mates2_rc.fa -rc OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/reads_simulated_joined_gold.fa -o /tmp/tmpfxil8y49/reads_simulated_mates1.fa -o /tmp/tmpfxil8y49/reads_simulated_mates2.fa OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno_modified_reads.fa -gff /tmp/tmpfxil8y49/st2_l100.gff -vcf /tmp/tmpfxil8y49/st2_l100.vcf OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno_modified_reads.fa -gff /tmp/tmpfxil8y49/st1_l30.gff -vcf /tmp/tmpfxil8y49/st1_l30.vcf -st 1 -l 30 OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno_modified_reads.fa -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/stellar.gff -gff /tmp/tmpfxil8y49/st1_l30_m.gff -vcf /tmp/tmpfxil8y49/st1_l30_m.vcf -st 1 OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno_modified_reads.fa -gff /tmp/tmpfxil8y49/st1_l30_ith5.gff -vcf /tmp/tmpfxil8y49/st1_l30_ith5.vcf -st 1 -l 30 -ith 5 -bth 5 OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno_modified_reads.fa -gff /tmp/tmpfxil8y49/st1_l30_gth3.gff -vcf /tmp/tmpfxil8y49/st1_l30_gth3.vcf -st 1 -l 30 -gth 3 OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno_modified_reads_mates1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno_modified_reads_mates2.fa -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/stellar_joinedMates_l30.gff -gff /tmp/tmpfxil8y49/pairedEnd_st1_l30.gff -vcf /tmp/tmpfxil8y49/pairedEnd_st1_l30.vcf -st 1 -mst 1 -ll 1000 -le 100 -rc OK
393: gustaf /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/gustaf/tests/read_reference2.fa -gff /tmp/tmpfxil8y49/reference2_st1_l30.gff -vcf /tmp/tmpfxil8y49/reference2_st1_l30.vcf -st 1 -l 30 OK
393: ==============================
393:      total tests: 12
393:     failed tests: 0
393: successful tests: 12
393: ==============================
389/414 Test #393: app_test_gustaf ...................................................................   Passed    1.67 sec
test 401
        Start 401: app_test_razers3

401: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
401: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3
401: Test timeout computed to be: 10000000
396: DELETING TEMP DIR /tmp/tmp87yx6y_n
396: Executing test for roi_intersect
396: ================================
396: 
396: roi_feature_projection -m projection -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.bed -or /tmp/tmp87yx6y_n/out_small_bed_mprojection_ss.roi OK
396: roi_feature_projection -m projection  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.bed -or /tmp/tmp87yx6y_n/out_small_bed_mprojection.roi OK
396: roi_feature_projection -m projection -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gff -or /tmp/tmp87yx6y_n/out_small_gff_mprojection_ss.roi OK
396: roi_feature_projection -m projection  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gff -or /tmp/tmp87yx6y_n/out_small_gff_mprojection.roi OK
396: roi_feature_projection -m projection -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gtf -or /tmp/tmp87yx6y_n/out_small_gtf_mprojection_ss.roi OK
396: roi_feature_projection -m projection  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gtf -or /tmp/tmp87yx6y_n/out_small_gtf_mprojection.roi OK
396: roi_feature_projection -m union -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.bed -or /tmp/tmp87yx6y_n/out_small_bed_munion_ss.roi OK
396: roi_feature_projection -m union  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.bed -or /tmp/tmp87yx6y_n/out_small_bed_munion.roi OK
396: roi_feature_projection -m union -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gff -or /tmp/tmp87yx6y_n/out_small_gff_munion_ss.roi OK
396: roi_feature_projection -m union  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gff -or /tmp/tmp87yx6y_n/out_small_gff_munion.roi OK
396: roi_feature_projection -m union -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gtf -or /tmp/tmp87yx6y_n/out_small_gtf_munion_ss.roi OK
396: roi_feature_projection -m union  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gtf -or /tmp/tmp87yx6y_n/out_small_gtf_munion.roi OK
396: roi_feature_projection -m difference -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.bed -or /tmp/tmp87yx6y_n/out_small_bed_mdifference_ss.roi OK
396: roi_feature_projection -m difference  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.bed -or /tmp/tmp87yx6y_n/out_small_bed_mdifference.roi OK
396: roi_feature_projection -m difference -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gff -or /tmp/tmp87yx6y_n/out_small_gff_mdifference_ss.roi OK
396: roi_feature_projection -m difference  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gff -or /tmp/tmp87yx6y_n/out_small_gff_mdifference.roi OK
396: roi_feature_projection -m difference -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gtf -or /tmp/tmp87yx6y_n/out_small_gtf_mdifference_ss.roi OK
396: roi_feature_projection -m difference  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gtf -or /tmp/tmp87yx6y_n/out_small_gtf_mdifference.roi OK
396: roi_feature_projection -m intersection -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.bed -or /tmp/tmp87yx6y_n/out_small_bed_mintersection_ss.roi OK
396: roi_feature_projection -m intersection  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.bed -or /tmp/tmp87yx6y_n/out_small_bed_mintersection.roi OK
396: roi_feature_projection -m intersection -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gff -or /tmp/tmp87yx6y_n/out_small_gff_mintersection_ss.roi OK
396: roi_feature_projection -m intersection  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gff -or /tmp/tmp87yx6y_n/out_small_gff_mintersection.roi OK
396: roi_feature_projection -m intersection -ss -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gtf -or /tmp/tmp87yx6y_n/out_small_gtf_mintersection_ss.roi OK
396: roi_feature_projection -m intersection  -ir /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/small.gtf -or /tmp/tmp87yx6y_n/out_small_gtf_mintersection.roi OK
396: bam2roi --strand-specific -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/micro_rna_sorted_2l.bam -of /tmp/tmp87yx6y_n/out_mrna_2l_ss.roi OK
396: bam2roi -if /build/reproducible-path/seqan2-2.4.0+dfsg/apps/ngs_roi/tests/micro_rna_sorted_2l.bam -of /tmp/tmp87yx6y_n/out_mrna_2l.roi OK
396: ==============================
396:      total tests: 26
396:     failed tests: 0
396: successful tests: 26
396: ==============================
390/414 Test #396: app_test_ngs_roi ..................................................................   Passed    2.58 sec
test 402
        Start 402: app_test_razers3_sequential

402: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/run_tests_sequential.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
402: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/razers3
402: Test timeout computed to be: 10000000
68: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan::Index<seqan::String<seqan::SimpleType<unsigned char, seqan::Dna5_>, seqan::Alloc<void> >, seqan::BidirectionalIndex<seqan::FMIndex<void, FMIndexWTConfig<void, unsigned long> > > > OK
68: **************************************
68:  Total Tests: 12
68:  Skipped:     0
68:  Errors:      0
68: **************************************
391/414 Test  #68: test_test_index_bifm ..............................................................   Passed   10.58 sec
test 403
        Start 403: app_test_sak

403: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
403: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak
403: Test timeout computed to be: 10000000
403: DELETING TEMP DIR /tmp/tmp1njxyedq
403: Executing test for sak
403: ======================
403: 
403: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/tests/adeno.fa -o /tmp/tmp1njxyedq/adeno.all.fa
403: OK
403: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/tests/adeno.fa -s 1 -o /tmp/tmp1njxyedq/adeno.seq1.fa
403: OK
403: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/tests/adeno.fa -ss 1-2 -o /tmp/tmp1njxyedq/adeno.seq1-2.fa
403: OK
403: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/tests/adeno.fa -s 3 -o /tmp/tmp1njxyedq/adeno.seq3.fa
403: OK
403: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/tests/adeno.fa -sn gi|9626621 -o /tmp/tmp1njxyedq/adeno.sn.fa
403: OK
403: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/tests/adeno.fa -s 1 -i 5-25 -o /tmp/tmp1njxyedq/adeno.s1i5-25.fa
403: OK
403: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/tests/adeno.fa -ss 1-2 -i 5-25 -o /tmp/tmp1njxyedq/adeno.s1-2i5-25.fa
403: OK
403: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak/tests/adeno.fa -s 1 -rc -o /tmp/tmp1njxyedq/adeno.s1rc.fa
403: OK
403: ==============================
403:      total tests: 8
403:     failed tests: 0
403: successful tests: 8
403: ==============================
392/414 Test #403: app_test_sak ......................................................................   Passed    0.89 sec
test 404
        Start 404: app_test_sam2matrix

404: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
404: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sam2matrix
404: Test timeout computed to be: 10000000
404: DELETING TEMP DIR /tmp/tmpa698mquc
404: Executing test for sam2matrix
404: =============================
404: 
404: sam2matrix -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/tests/ecoli.sam -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/tests/ehec.sam -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sam2matrix/tests/ecoli_0.50_ehec_0.50.fq -rf ecoli.fa -rf ehec.fa -o /tmp/tmpa698mquc/test_sam2matrix.tsv OK
404: ==============================
404:      total tests: 1
404:     failed tests: 0
404: successful tests: 1
404: ==============================
393/414 Test #404: app_test_sam2matrix ...............................................................   Passed    0.62 sec
test 405
        Start 405: app_test_samcat

405: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
405: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/samcat
405: Test timeout computed to be: 10000000
397: Executing test for pair_align
397: =============================
397: 
397: pair_align -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.fa OK
397: pair_align -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.fa OK
397: pair_align -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.fa OK
397: pair_align -a protein -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.protein.fa OK
397: pair_align -a protein -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.protein.fa OK
397: pair_align -a protein -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.protein.fa OK
397: pair_align -m nw -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.mnw.fa OK
397: pair_align -m gotoh -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.mgotoh.fa OK
397: pair_align -m sw -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.msw.fa OK
397: pair_align -m lcs -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.mlcs.fa OK
397: pair_align -m nw -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.mnw.fa OK
397: pair_align -m gotoh -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.mgotoh.fa OK
397: pair_align -m sw -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.msw.fa OK
397: pair_align -m lcs -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.mlcs.fa OK
397: pair_align -m nw -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.mnw.fa OK
397: pair_align -m gotoh -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.mgotoh.fa OK
397: pair_align -m sw -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.msw.fa OK
397: pair_align -m lcs -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.mlcs.fa OK
397: pair_align -g -20 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.g-20.fa OK
397: pair_align -e -5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.e-5.fa OK
397: pair_align -ms 10 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.ms10.fa OK
397: pair_align -mm -8 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.mm-8.fa OK
397: pair_align -g -20 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.g-20.fa OK
397: pair_align -e -5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.e-5.fa OK
397: pair_align -ms 10 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.ms10.fa OK
397: pair_align -mm -8 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.mm-8.fa OK
397: pair_align -g -20 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.g-20.fa OK
397: pair_align -e -5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.e-5.fa OK
397: pair_align -ms 10 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.ms10.fa OK
397: pair_align -mm -8 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.mm-8.fa OK
397: pair_align -ma /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/VTML200I -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.maVTML200.fa OK
397: pair_align -ma /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/VTML200I -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.maVTML200.fa OK
397: pair_align -ma /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/VTML200I -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.maVTML200.fa OK
397: pair_align -lo 5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.lo5.fa OK
397: pair_align -hi 5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.hi5.fa OK
397: pair_align -lo 5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.lo5.fa OK
397: pair_align -hi 5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.hi5.fa OK
397: pair_align -lo 5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.lo5.fa OK
397: pair_align -hi 5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.hi5.fa OK
397: pair_align -c ffff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.cffff.fa OK
397: pair_align -c tttt -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.ctttt.fa OK
397: pair_align -c ffft -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.cffft.fa OK
397: pair_align -c fftf -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.cfftf.fa OK
397: pair_align -c ftff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.cftff.fa OK
397: pair_align -c tfff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.ctfff.fa OK
397: pair_align -c fftt -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.cfftt.fa OK
397: pair_align -c fttf -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.cfttf.fa OK
397: pair_align -c ttff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.cttff.fa OK
397: pair_align -c tfft -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1aab.fa -o /tmp/tmp196r7xv1/1aab.ctfft.fa OK
397: pair_align -c ffff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.cffff.fa OK
397: pair_align -c tttt -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.ctttt.fa OK
397: pair_align -c ffft -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.cffft.fa OK
397: pair_align -c fftf -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.cfftf.fa OK
397: pair_align -c ftff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.cftff.fa OK
397: pair_align -c tfff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.ctfff.fa OK
397: pair_align -c fftt -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.cfftt.fa OK
397: pair_align -c fttf -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.cfttf.fa OK
397: pair_align -c ttff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.cttff.fa OK
397: pair_align -c tfft -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/1ad2.fa -o /tmp/tmp196r7xv1/1ad2.ctfft.fa OK
397: pair_align -c ffff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.cffff.fa OK
397: DELETING TEMP DIR /tmp/tmp196r7xv1
405: DELETING TEMP DIR /tmp/tmpxikzjyzq
405: Executing test for samcat
405: =========================
405: 
405: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/samcat /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/tests/ex1_a1.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/tests/ex1_a2.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/tests/ex1_a3.sam -o /tmp/tmpxikzjyzq/ex1_merged.sam
405: OK
405: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/samcat /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/tests/ex1_a1.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/tests/ex1_a2.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/samcat/tests/ex1_a3.sam -o /tmp/tmpxikzjyzq/ex1_merged.bam
405: OK
405: ==============================
405:      total tests: 2
405:     failed tests: 0
405: successful tests: 2
405: ==============================
397: pair_align -c tttt -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.ctttt.fa OK
397: pair_align -c ffft -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.cffft.fa OK
397: pair_align -c fftf -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.cfftf.fa OK
397: pair_align -c ftff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.cftff.fa OK
397: pair_align -c tfff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.ctfff.fa OK
397: pair_align -c fftt -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.cfftt.fa OK
397: pair_align -c fttf -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.cfttf.fa OK
397: pair_align -c ttff -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.cttff.fa OK
397: pair_align -c tfft -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/2trx.fa -o /tmp/tmp196r7xv1/2trx.ctfft.fa OK
397: pair_align -a dna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/adeno1.fa -o /tmp/tmp196r7xv1/adeno1.fa OK
397: pair_align -a dna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/adeno2.fa -o /tmp/tmp196r7xv1/adeno2.fa OK
397: pair_align -a dna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/adeno3.fa -o /tmp/tmp196r7xv1/adeno3.fa OK
397: pair_align -a rna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/adeno1-rna.fa -o /tmp/tmp196r7xv1/adeno1-rna.fa OK
397: pair_align -a rna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/adeno2-rna.fa -o /tmp/tmp196r7xv1/adeno2-rna.fa OK
397: pair_align -a rna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/pair_align/tests/adeno3-rna.fa -o /tmp/tmp196r7xv1/adeno3-rna.fa OK
397: ==============================
397:      total tests: 75
397:     failed tests: 0
397: successful tests: 75
397: ==============================
394/414 Test #397: app_test_pair_align ...............................................................   Passed    4.77 sec
395/414 Test #405: app_test_samcat ...................................................................   Passed    0.51 sec
test 406
        Start 406: app_test_searchjoin

406: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
406: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/searchjoin
406: Test timeout computed to be: 10000000
test 407
        Start 407: app_test_seqan_tcoffee

407: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
407: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqan_tcoffee
407: Test timeout computed to be: 10000000
401: Executing test for razers3
401: ===========================
401: 
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-tc1.razers OK
401: razers3 -tc 1 -ng /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-ng-tc1.razers OK
401: razers3 -tc 1 -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-r-tc1.razers OK
401: razers3 -tc 1 -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-f-tc1.razers OK
401: razers3 -tc 1 -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i90-tc1.razers OK
401: razers3 -tc 1 -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i91-tc1.razers OK
401: razers3 -tc 1 -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i92-tc1.razers OK
401: razers3 -tc 1 -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i93-tc1.razers OK
401: razers3 -tc 1 -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i94-tc1.razers OK
401: razers3 -tc 1 -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i95-tc1.razers OK
401: razers3 -tc 1 -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i96-tc1.razers OK
401: razers3 -tc 1 -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i97-tc1.razers OK
401: razers3 -tc 1 -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i98-tc1.razers OK
401: razers3 -tc 1 -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i99-tc1.razers OK
401: razers3 -tc 1 -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-i100-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-of0-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-of1-tc1.fa OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-of2-tc1.eland OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-of3-tc1.gff OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-of4-tc1.sam OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-of5-tc1.afg OK
401: razers3 -tc 1 -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-so0-tc1.razers OK
401: razers3 -tc 1 -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads36_1-so1-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-tc1.razers OK
401: razers3 -tc 1 -ng /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-ng-tc1.razers OK
401: razers3 -tc 1 -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-r-tc1.razers OK
401: razers3 -tc 1 -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-f-tc1.razers OK
401: razers3 -tc 1 -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i90-tc1.razers OK
401: razers3 -tc 1 -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i91-tc1.razers OK
401: razers3 -tc 1 -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i92-tc1.razers OK
401: razers3 -tc 1 -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i93-tc1.razers OK
401: razers3 -tc 1 -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i94-tc1.razers OK
401: razers3 -tc 1 -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i95-tc1.razers OK
401: razers3 -tc 1 -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i96-tc1.razers OK
400: Executing test for razers
400: =========================
400: 
400: razers --low-memory /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id.razers OK
400: razers --low-memory -id -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-r.razers OK
400: razers --low-memory -id -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-f.razers OK
400: razers --low-memory -id -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i90.razers OK
400: razers --low-memory -id -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i91.razers OK
400: razers --low-memory -id -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i92.razers OK
400: razers --low-memory -id -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i93.razers OK
400: razers --low-memory -id -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i94.razers OK
400: razers --low-memory -id -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i95.razers OK
400: razers --low-memory -id -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i96.razers OK
400: razers --low-memory -id -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i97.razers OK
400: razers --low-memory -id -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i98.razers OK
400: razers --low-memory -id -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i99.razers OK
400: razers --low-memory -id -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-i100.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-of0.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-of1.fa OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-of2.eland OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-of3.gff OK
400: razers --low-memory -id -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-so0.razers OK
400: razers --low-memory -id -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmp667aziso/se-adeno-reads36_1-id-so1.razers OK
400: razers --low-memory /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id.razers OK
400: razers --low-memory -id -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-r.razers OK
400: razers --low-memory -id -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-f.razers OK
400: razers --low-memory -id -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i90.razers OK
400: razers --low-memory -id -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i91.razers OK
400: razers --low-memory -id -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i92.razers OK
400: razers --low-memory -id -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i93.razers OK
400: razers --low-memory -id -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i94.razers OK
400: razers --low-memory -id -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i95.razers OK
400: razers --low-memory -id -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i96.razers OK
400: razers --low-memory -id -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i97.razers OK
402: Executing test for razers3
402: ===========================
402: 
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-tc0.razers OK
402: razers3 -tc 0 -ng /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-ng-tc0.razers OK
402: razers3 -tc 0 -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-r-tc0.razers OK
402: razers3 -tc 0 -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-f-tc0.razers OK
402: razers3 -tc 0 -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i90-tc0.razers OK
402: razers3 -tc 0 -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i91-tc0.razers OK
402: razers3 -tc 0 -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i92-tc0.razers OK
402: razers3 -tc 0 -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i93-tc0.razers OK
402: razers3 -tc 0 -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i94-tc0.razers OK
402: razers3 -tc 0 -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i95-tc0.razers OK
402: razers3 -tc 0 -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i96-tc0.razers OK
402: razers3 -tc 0 -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i97-tc0.razers OK
402: razers3 -tc 0 -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i98-tc0.razers OK
402: razers3 -tc 0 -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i99-tc0.razers OK
402: razers3 -tc 0 -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-i100-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-of0-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-of1-tc0.fa OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-of2-tc0.eland OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-of3-tc0.gff OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-of4-tc0.sam OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-of5-tc0.afg OK
402: razers3 -tc 0 -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-so0-tc0.razers OK
402: razers3 -tc 0 -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads36_1-so1-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-tc0.razers OK
402: razers3 -tc 0 -ng /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-ng-tc0.razers OK
402: razers3 -tc 0 -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-r-tc0.razers OK
402: razers3 -tc 0 -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-f-tc0.razers OK
402: razers3 -tc 0 -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i90-tc0.razers OK
402: razers3 -tc 0 -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i91-tc0.razers OK
402: razers3 -tc 0 -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i92-tc0.razers OK
402: razers3 -tc 0 -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i93-tc0.razers OK
402: razers3 -tc 0 -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i94-tc0.razers OK
402: razers3 -tc 0 -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i95-tc0.razers OK
402: razers3 -tc 0 -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i96-tc0.razers OK
407: Executing test for seqan_tcoffee
407: ================================
407: 
407: seqan_tcoffee -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.fasta OK
407: seqan_tcoffee -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.fasta OK
407: seqan_tcoffee -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.fasta OK
407: seqan_tcoffee -a protein -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.protein.fasta OK
407: seqan_tcoffee -a protein -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.protein.fasta OK
407: seqan_tcoffee -a protein -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.protein.fasta OK
407: seqan_tcoffee -m global -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.mglobal.fasta OK
407: seqan_tcoffee -m local -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.mlocal.fasta OK
407: seqan_tcoffee -m overlap -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.moverlap.fasta OK
407: seqan_tcoffee -m lcs -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.mlcs.fasta OK
407: seqan_tcoffee -m global -m local -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.mglobal.mlocal.fasta OK
407: seqan_tcoffee -m local -m overlap -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.mlocal.moverlap.fasta OK
407: seqan_tcoffee -m global -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.mglobal.fasta OK
407: seqan_tcoffee -m local -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.mlocal.fasta OK
407: seqan_tcoffee -m overlap -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.moverlap.fasta OK
407: seqan_tcoffee -m lcs -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.mlcs.fasta OK
407: seqan_tcoffee -m global -m local -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.mglobal.mlocal.fasta OK
407: seqan_tcoffee -m local -m overlap -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.mlocal.moverlap.fasta OK
407: seqan_tcoffee -m global -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.mglobal.fasta OK
407: seqan_tcoffee -m local -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.mlocal.fasta OK
407: seqan_tcoffee -m overlap -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.moverlap.fasta OK
407: seqan_tcoffee -m lcs -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.mlcs.fasta OK
407: seqan_tcoffee -m global -m local -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.mglobal.mlocal.fasta OK
407: seqan_tcoffee -m local -m overlap -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.mlocal.moverlap.fasta OK
407: seqan_tcoffee -g -20 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.g-20.fasta OK
407: seqan_tcoffee -e -5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.e-5.fasta OK
407: seqan_tcoffee -ms 10 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.ms10.fasta OK
407: seqan_tcoffee -mm -8 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.mm-8.fasta OK
407: seqan_tcoffee -g -20 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.g-20.fasta OK
407: seqan_tcoffee -e -5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.e-5.fasta OK
407: seqan_tcoffee -ms 10 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.ms10.fasta OK
407: seqan_tcoffee -mm -8 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.mm-8.fasta OK
407: seqan_tcoffee -g -20 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.g-20.fasta OK
407: seqan_tcoffee -e -5 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.e-5.fasta OK
407: seqan_tcoffee -ms 10 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.ms10.fasta OK
407: seqan_tcoffee -mm -8 -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.mm-8.fasta OK
407: seqan_tcoffee -ma /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/VTML200I -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.maVTML200.fasta OK
407: seqan_tcoffee -ma /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/VTML200I -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.maVTML200.fasta OK
407: seqan_tcoffee -ma /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/VTML200I -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.maVTML200.fasta OK
407: seqan_tcoffee -u /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.newick -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.u.fasta OK
407: seqan_tcoffee -u /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.newick -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.u.fasta OK
407: seqan_tcoffee -u /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.newick -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.u.fasta OK
407: seqan_tcoffee -b nj -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.bnj.fasta OK
407: seqan_tcoffee -b min -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.bmin.fasta OK
407: seqan_tcoffee -b max -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.bmax.fasta OK
407: seqan_tcoffee -b avg -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.bavg.fasta OK
407: seqan_tcoffee -b wavg -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmphdoqqwaj/1aab.bwavg.fasta OK
407: seqan_tcoffee -b nj -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.bnj.fasta OK
407: seqan_tcoffee -b min -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.bmin.fasta OK
407: seqan_tcoffee -b max -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.bmax.fasta OK
407: seqan_tcoffee -b avg -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.bavg.fasta OK
407: seqan_tcoffee -b wavg -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmphdoqqwaj/1ad2.bwavg.fasta OK
407: seqan_tcoffee -b nj -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.bnj.fasta OK
401: razers3 -tc 1 -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i97-tc1.razers OK
401: razers3 -tc 1 -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i98-tc1.razers OK
401: razers3 -tc 1 -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i99-tc1.razers OK
401: razers3 -tc 1 -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-i100-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-of0-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-of1-tc1.fa OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-of2-tc1.eland OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-of3-tc1.gff OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-of4-tc1.sam OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-of5-tc1.afg OK
401: razers3 -tc 1 -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-so0-tc1.razers OK
401: razers3 -tc 1 -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpepc56p_v/se-adeno-reads100_1-so1-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-tc1.razers OK
401: razers3 -tc 1 -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-r-tc1.razers OK
401: razers3 -tc 1 -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-f-tc1.razers OK
401: razers3 -tc 1 -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i90-tc1.razers OK
401: razers3 -tc 1 -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i91-tc1.razers OK
401: razers3 -tc 1 -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i92-tc1.razers OK
401: razers3 -tc 1 -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i93-tc1.razers OK
401: razers3 -tc 1 -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i94-tc1.razers OK
401: razers3 -tc 1 -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i95-tc1.razers OK
401: razers3 -tc 1 -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i96-tc1.razers OK
401: razers3 -tc 1 -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i97-tc1.razers OK
401: razers3 -tc 1 -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i98-tc1.razers OK
401: razers3 -tc 1 -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i99-tc1.razers OK
401: razers3 -tc 1 -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-i100-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-of0-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-of1-tc1.fa OK
407: DELETING TEMP DIR /tmp/tmphdoqqwaj
407: seqan_tcoffee -b min -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.bmin.fasta OK
407: seqan_tcoffee -b max -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.bmax.fasta OK
407: seqan_tcoffee -b avg -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.bavg.fasta OK
407: seqan_tcoffee -b wavg -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmphdoqqwaj/2trx.bwavg.fasta OK
407: seqan_tcoffee -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1aab.fasta OK
407: seqan_tcoffee -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/1ad2.fasta OK
407: seqan_tcoffee -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/2trx.fasta OK
407: seqan_tcoffee -a dna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/adeno2.fa -o /tmp/tmphdoqqwaj/adeno2.fasta OK
407: seqan_tcoffee -a dna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/adeno3.fa -o /tmp/tmphdoqqwaj/adeno3.fasta OK
407: seqan_tcoffee -a dna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/adeno4.fa -o /tmp/tmphdoqqwaj/adeno4.fasta OK
407: seqan_tcoffee -a rna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/adeno2-rna.fa -o /tmp/tmphdoqqwaj/adeno2-rna.fasta OK
407: seqan_tcoffee -a rna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/adeno3-rna.fa -o /tmp/tmphdoqqwaj/adeno3-rna.fasta OK
407: seqan_tcoffee -a rna -s /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqan_tcoffee/tests/adeno4-rna.fa -o /tmp/tmphdoqqwaj/adeno4-rna.fasta OK
407: ==============================
407:      total tests: 66
407:     failed tests: 0
407: successful tests: 66
407: ==============================
396/414 Test #407: app_test_seqan_tcoffee ............................................................   Passed    5.69 sec
test 408
        Start 408: app_test_seqcons2

408: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
408: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/seqcons2
408: Test timeout computed to be: 10000000
402: razers3 -tc 0 -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i97-tc0.razers OK
402: razers3 -tc 0 -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i98-tc0.razers OK
402: razers3 -tc 0 -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i99-tc0.razers OK
402: razers3 -tc 0 -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-i100-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-of0-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-of1-tc0.fa OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-of2-tc0.eland OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-of3-tc0.gff OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-of4-tc0.sam OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-of5-tc0.afg OK
402: razers3 -tc 0 -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-so0-tc0.razers OK
402: razers3 -tc 0 -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpnaulwpmf/se-adeno-reads100_1-so1-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-tc0.razers OK
402: razers3 -tc 0 -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-r-tc0.razers OK
402: razers3 -tc 0 -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-f-tc0.razers OK
402: razers3 -tc 0 -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i90-tc0.razers OK
402: razers3 -tc 0 -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i91-tc0.razers OK
402: razers3 -tc 0 -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i92-tc0.razers OK
402: razers3 -tc 0 -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i93-tc0.razers OK
402: razers3 -tc 0 -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i94-tc0.razers OK
402: razers3 -tc 0 -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i95-tc0.razers OK
402: razers3 -tc 0 -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i96-tc0.razers OK
402: razers3 -tc 0 -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i97-tc0.razers OK
402: razers3 -tc 0 -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i98-tc0.razers OK
402: razers3 -tc 0 -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i99-tc0.razers OK
402: razers3 -tc 0 -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-i100-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-of0-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-of1-tc0.fa OK
408: DELETING TEMP DIR /tmp/tmp2_v54sz_
408: Executing test for seqcons2
408: ===========================
408: 
408: seqcons2 -m overlap_consensus -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oc /tmp/tmp2_v54sz_/alns1.overlap_consensus.fa -oa /tmp/tmp2_v54sz_/alns1.overlap_consensus.sam OK
408: seqcons2 -m nop -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oc /tmp/tmp2_v54sz_/alns1.nop.fa -oa /tmp/tmp2_v54sz_/alns1.nop.sam OK
408: seqcons2 -m overlap_consensus -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.overlap_consensus.sam -oc /tmp/tmp2_v54sz_/alns1.overlap_consensus.fa OK
408: seqcons2 -m pos_consensus -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.pos_consensus.sam -oc /tmp/tmp2_v54sz_/alns1.pos_consensus.fa OK
408: seqcons2 -m contig_consensus -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.contig_consensus.sam -oc /tmp/tmp2_v54sz_/alns1.contig_consensus.fa OK
408: seqcons2 -m realign -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.realign.sam -oc /tmp/tmp2_v54sz_/alns1.realign.fa OK
408: seqcons2 -m nop -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.nop.sam -oc /tmp/tmp2_v54sz_/alns1.nop.fa OK
408: seqcons2 -m overlap_consensus -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.overlap_consensus.txt OK
408: seqcons2 -m pos_consensus -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.pos_consensus.txt OK
408: seqcons2 -m contig_consensus -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.contig_consensus.txt OK
408: seqcons2 -m realign -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.realign.txt OK
408: seqcons2 -m nop -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp2_v54sz_/alns1.nop.txt OK
408: seqcons2 -m align_consensus -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/seqs2.fa -oa /tmp/tmp2_v54sz_/seqs2.align_consensus.sam -oc /tmp/tmp2_v54sz_/seqs2.align_consensus.fa OK
408: seqcons2 -m align_consensus -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/seqcons2/tests/seqs2.fa -oa /tmp/tmp2_v54sz_/seqs2.align_consensus.txt OK
408: ==============================
408:      total tests: 14
408:     failed tests: 0
408: successful tests: 14
408: ==============================
397/414 Test #408: app_test_seqcons2 .................................................................   Passed    1.71 sec
test 409
        Start 409: app_test_sgip

409: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
409: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sgip
409: Test timeout computed to be: 10000000
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-of2-tc1.eland OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-of3-tc1.gff OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-of4-tc1.sam OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-of5-tc1.afg OK
401: razers3 -tc 1 -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-so0-tc1.razers OK
401: razers3 -tc 1 -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads36_2-so1-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-tc1.razers OK
401: razers3 -tc 1 -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-r-tc1.razers OK
401: razers3 -tc 1 -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-f-tc1.razers OK
401: razers3 -tc 1 -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i90-tc1.razers OK
401: razers3 -tc 1 -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i91-tc1.razers OK
401: razers3 -tc 1 -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i92-tc1.razers OK
401: razers3 -tc 1 -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i93-tc1.razers OK
401: razers3 -tc 1 -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i94-tc1.razers OK
401: razers3 -tc 1 -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i95-tc1.razers OK
401: razers3 -tc 1 -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i96-tc1.razers OK
401: razers3 -tc 1 -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i97-tc1.razers OK
401: razers3 -tc 1 -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i98-tc1.razers OK
401: razers3 -tc 1 -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i99-tc1.razers OK
401: razers3 -tc 1 -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-i100-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-of0-tc1.razers OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-of1-tc1.fa OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-of2-tc1.eland OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-of3-tc1.gff OK
409: DELETING TEMP DIR /tmp/tmp8qtxb9oo
409: Executing test for sgip
409: =========================
409: 
409: sgip -o /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/r01/iso_r01_m200.A00 -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/r01/iso_r01_m200.B00 -v 2 -i OK
409: sgip -o /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/r01/iso_r01_m200.A01 -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/r01/iso_r01_m200.B01 -v 2 -i OK
409: sgip -o /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/r01/iso_r01_m200.A00 -c /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/r01/iso_r01_m200.B01 -v 2 -i OK
409: sgip -o /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/r01/iso_r01_m200.A00 -v 2 OK
409: sgip -o /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/srg/latin-4 -v 2 OK
409: sgip -o /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/srg/lattice-4 -v 2 OK
409: sgip -o /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/srg/paley-5 -v 2 OK
409: sgip -o /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/srg/sts-7 -v 2 OK
409: sgip -o /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sgip/tests/../example/srg/triang-5 -v 2 OK
409: ==============================
409:      total tests: 9
409:     failed tests: 0
409: successful tests: 9
409: ==============================
398/414 Test #409: app_test_sgip .....................................................................   Passed    1.35 sec
test 410
        Start 410: app_test_snp_store

410: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
410: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/snp_store
410: Test timeout computed to be: 10000000
401: DELETING TEMP DIR /tmp/tmpepc56p_v
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-of2-tc0.eland OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-of3-tc0.gff OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-of4-tc0.sam OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-of5-tc0.afg OK
402: razers3 -tc 0 -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-so0-tc0.razers OK
402: razers3 -tc 0 -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads36_2-so1-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-tc0.razers OK
402: razers3 -tc 0 -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-r-tc0.razers OK
402: razers3 -tc 0 -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-f-tc0.razers OK
402: razers3 -tc 0 -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i90-tc0.razers OK
402: razers3 -tc 0 -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i91-tc0.razers OK
402: razers3 -tc 0 -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i92-tc0.razers OK
402: razers3 -tc 0 -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i93-tc0.razers OK
402: razers3 -tc 0 -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i94-tc0.razers OK
402: razers3 -tc 0 -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i95-tc0.razers OK
402: razers3 -tc 0 -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i96-tc0.razers OK
402: razers3 -tc 0 -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i97-tc0.razers OK
402: razers3 -tc 0 -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i98-tc0.razers OK
402: razers3 -tc 0 -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i99-tc0.razers OK
402: razers3 -tc 0 -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-i100-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-of0-tc0.razers OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-of1-tc0.fa OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-of2-tc0.eland OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-of3-tc0.gff OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-of4-tc1.sam OK
401: razers3 -tc 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-of5-tc1.afg OK
401: razers3 -tc 1 -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-so0-tc1.razers OK
401: razers3 -tc 1 -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpepc56p_v/pe-adeno-reads100_2-so1-tc1.razers OK
401: ==============================
401:      total tests: 92
401:     failed tests: 0
401: successful tests: 92
401: ==============================
399/414 Test #401: app_test_razers3 ..................................................................   Passed   12.44 sec
test 411
        Start 411: app_test_splazers

411: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
411: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/splazers
411: Test timeout computed to be: 10000000
402: DELETING TEMP DIR /tmp/tmpnaulwpmf
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-of4-tc0.sam OK
402: razers3 -tc 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-of5-tc0.afg OK
402: razers3 -tc 0 -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-so0-tc0.razers OK
402: razers3 -tc 0 -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpnaulwpmf/pe-adeno-reads100_2-so1-tc0.razers OK
402: ==============================
402:      total tests: 92
402:     failed tests: 0
402: successful tests: 92
402: ==============================
400/414 Test #402: app_test_razers3_sequential .......................................................   Passed   11.82 sec
test 412
        Start 412: app_test_stellar

412: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
412: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/stellar
412: Test timeout computed to be: 10000000
406: DELETING TEMP DIR /tmp/tmpi03eshds
406: Executing test for searchjoin
406: ===========================
406: 
406: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/geo_database.csv 0 -i geo -t 4 -sl 5 -o /tmp/tmpi03eshds/join_geo_0_5.out OK
406: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/geo_database.csv 1 -i geo -t 4 -sl 5 -o /tmp/tmpi03eshds/join_geo_1_5.out OK
406: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/geo_database.csv 3 -i geo -t 4 -sl 5 -o /tmp/tmpi03eshds/join_geo_3_5.out OK
406: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/dna_database.csv 0 -i dna -t 4 -sl 10 -o /tmp/tmpi03eshds/join_dna_0_10.out OK
406: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/dna_database.csv 8 -i dna -t 4 -sl 10 -o /tmp/tmpi03eshds/join_dna_8_10.out OK
406: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/dna_database.csv 16 -i dna -t 4 -sl 10 -o /tmp/tmpi03eshds/join_dna_16_10.out OK
406: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/s4_search /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/geo_database.csv /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/geo_queries.csv --no-wait -i geo -t 4 -sl 5 -o /tmp/tmpi03eshds/search_geo_5.out OK
406: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/s4_search /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/dna_database.csv /build/reproducible-path/seqan2-2.4.0+dfsg/apps/searchjoin/tests/dna_queries.csv --no-wait -i dna -t 4 -sl 10 -o /tmp/tmpi03eshds/search_dna_10.out OK
406: ==============================
406:      total tests: 8
406:     failed tests: 0
406: successful tests: 8
406: ==============================
401/414 Test #406: app_test_searchjoin ...............................................................   Passed   13.00 sec
test 413
        Start 413: app_test_tree_recon

413: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
413: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/tree_recon
413: Test timeout computed to be: 10000000
413: DELETING TEMP DIR /tmp/tmpoqc10a1m
413: Executing test for tree_recomb
413: ==============================
413: 
413: tree_recomb -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example1.dist -o /tmp/tmpoqc10a1m/example1.dot OK
413: tree_recomb -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example2.dist -o /tmp/tmpoqc10a1m/example2.dot OK
413: tree_recomb -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example3.dist -o /tmp/tmpoqc10a1m/example3.dot OK
413: tree_recomb -b nj -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example1.dist -o /tmp/tmpoqc10a1m/example1.nj.dot OK
413: tree_recomb -b min -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example1.dist -o /tmp/tmpoqc10a1m/example1.min.dot OK
413: tree_recomb -b max -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example1.dist -o /tmp/tmpoqc10a1m/example1.max.dot OK
413: tree_recomb -b wavg -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example1.dist -o /tmp/tmpoqc10a1m/example1.wavg.dot OK
413: tree_recomb -b nj -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example2.dist -o /tmp/tmpoqc10a1m/example2.nj.dot OK
413: tree_recomb -b min -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example2.dist -o /tmp/tmpoqc10a1m/example2.min.dot OK
413: tree_recomb -b max -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example2.dist -o /tmp/tmpoqc10a1m/example2.max.dot OK
413: tree_recomb -b avg -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example2.dist -o /tmp/tmpoqc10a1m/example2.avg.dot OK
413: tree_recomb -b wavg -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example2.dist -o /tmp/tmpoqc10a1m/example2.wavg.dot OK
413: tree_recomb -b nj -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example3.dist -o /tmp/tmpoqc10a1m/example3.nj.dot OK
413: tree_recomb -b min -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example3.dist -o /tmp/tmpoqc10a1m/example3.min.dot OK
413: tree_recomb -b max -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example3.dist -o /tmp/tmpoqc10a1m/example3.max.dot OK
413: tree_recomb -b avg -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example3.dist -o /tmp/tmpoqc10a1m/example3.avg.dot OK
413: tree_recomb -b wavg -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example3.dist -o /tmp/tmpoqc10a1m/example3.wavg.dot OK
413: tree_recomb -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example1.dist -o /tmp/tmpoqc10a1m/example1.dot OK
413: tree_recomb -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example1.dist -o /tmp/tmpoqc10a1m/example1.newick OK
413: tree_recomb -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example2.dist -o /tmp/tmpoqc10a1m/example2.dot OK
413: tree_recomb -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example2.dist -o /tmp/tmpoqc10a1m/example2.newick OK
413: tree_recomb -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example3.dist -o /tmp/tmpoqc10a1m/example3.dot OK
413: tree_recomb -m /build/reproducible-path/seqan2-2.4.0+dfsg/apps/tree_recon/tests/example3.dist -o /tmp/tmpoqc10a1m/example3.newick OK
413: ==============================
413:      total tests: 23
413:     failed tests: 0
413: successful tests: 23
413: ==============================
402/414 Test #413: app_test_tree_recon ...............................................................   Passed    0.76 sec
test 414
        Start 414: app_test_yara

414: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/tests/run_tests.py" "/build/reproducible-path/seqan2-2.4.0+dfsg" "/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu"
414: Working Directory: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/yara
414: Test timeout computed to be: 10000000
414: DELETING TEMP DIR /tmp/tmpi45ren2i
414: Executing test for Yara
414: ==============================
414: 
414: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/yara_indexer /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/tests/input/adeno-genome.fa -o /tmp/tmpi45ren2i/adeno-genome OK
414: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/yara_mapper /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/tests/gold/adeno-genome /build/reproducible-path/seqan2-2.4.0+dfsg/apps/yara/tests/input/adeno-reads_1.fa -o /tmp/tmpi45ren2i/adeno-reads_1.t1.sam --threads 1 OK
414: ==============================
414:      total tests: 2
414:     failed tests: 0
414: successful tests: 2
414: ==============================
403/414 Test #414: app_test_yara .....................................................................   Passed    0.37 sec
411: Executing test for splazers
411: =========================
411: 
411: splazers /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_default.out OK
411: splazers -sm 16 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml16_ep0_es0.out OK
411: splazers -sm 16 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml16_ep0_es1.out OK
411: splazers -sm 16 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml16_ep0_es2.out OK
411: splazers -sm 16 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml16_ep1_es0.out OK
411: splazers -sm 16 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml16_ep1_es1.out OK
411: splazers -sm 16 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml16_ep1_es2.out OK
411: splazers -sm 17 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml17_ep0_es0.out OK
411: splazers -sm 17 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml17_ep0_es1.out OK
411: splazers -sm 17 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml17_ep0_es2.out OK
411: splazers -sm 17 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml17_ep1_es0.out OK
411: splazers -sm 17 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml17_ep1_es1.out OK
411: splazers -sm 17 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml17_ep1_es2.out OK
411: splazers -sm 18 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml18_ep0_es0.out OK
411: splazers -sm 18 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml18_ep0_es1.out OK
411: splazers -sm 18 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml18_ep0_es2.out OK
411: splazers -sm 18 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml18_ep1_es0.out OK
411: splazers -sm 18 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml18_ep1_es1.out OK
411: splazers -sm 18 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml18_ep1_es2.out OK
411: splazers -sm 19 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml19_ep0_es0.out OK
411: splazers -sm 19 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml19_ep0_es1.out OK
411: splazers -sm 19 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml19_ep0_es2.out OK
411: splazers -sm 19 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml19_ep1_es0.out OK
411: splazers -sm 19 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml19_ep1_es1.out OK
411: splazers -sm 19 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml19_ep1_es2.out OK
411: splazers -sm 20 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20_ep0_es0.out OK
411: splazers -sm 20 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20_ep0_es1.out OK
411: splazers -sm 20 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20_ep0_es2.out OK
411: splazers -sm 20 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20_ep1_es0.out OK
411: splazers -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20_ep1_es1.out OK
411: splazers -sm 20 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20_ep1_es2.out OK
411: splazers -sm 21 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml21_ep0_es0.out OK
400: razers --low-memory -id -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i98.razers OK
400: razers --low-memory -id -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i99.razers OK
400: razers --low-memory -id -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-i100.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-of0.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-of1.fa OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-of2.eland OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-of3.gff OK
400: razers --low-memory -id -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-so0.razers OK
400: razers --low-memory -id -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmp667aziso/se-adeno-reads100_1-id-so1.razers OK
400: razers --low-memory /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id.razers OK
400: razers --low-memory -id -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-r.razers OK
400: razers --low-memory -id -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-f.razers OK
400: razers --low-memory -id -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i90.razers OK
400: razers --low-memory -id -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i91.razers OK
400: razers --low-memory -id -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i92.razers OK
400: razers --low-memory -id -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i93.razers OK
400: razers --low-memory -id -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i94.razers OK
400: razers --low-memory -id -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i95.razers OK
400: razers --low-memory -id -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i96.razers OK
400: razers --low-memory -id -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i97.razers OK
400: razers --low-memory -id -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i98.razers OK
400: razers --low-memory -id -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i99.razers OK
400: razers --low-memory -id -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-i100.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-of0.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-of1.fa OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-of2.eland OK
27: test_bam_io_bam_file_bam_file_seek OK
27: test_bam_io_sam_file_issue_489 OK
27: test_bam_io_bam_index_save OK
27: test_bam_io_bam_index_open OK
27: **************************************
27:  Total Tests: 107
27:  Skipped:     0
27:  Errors:      0
27: **************************************
404/414 Test  #27: test_test_bam_io ..................................................................   Passed   28.96 sec
411: splazers -sm 21 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml21_ep0_es1.out OK
411: splazers -sm 21 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml21_ep0_es2.out OK
411: splazers -sm 21 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml21_ep1_es0.out OK
411: splazers -sm 21 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml21_ep1_es1.out OK
411: splazers -sm 21 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml21_ep1_es2.out OK
411: splazers -sm 22 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml22_ep0_es0.out OK
411: splazers -sm 22 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml22_ep0_es1.out OK
411: splazers -sm 22 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml22_ep0_es2.out OK
411: splazers -sm 22 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml22_ep1_es0.out OK
411: splazers -sm 22 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml22_ep1_es1.out OK
411: splazers -sm 22 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml22_ep1_es2.out OK
411: splazers -sm 23 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml23_ep0_es0.out OK
411: splazers -sm 23 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml23_ep0_es1.out OK
411: splazers -sm 23 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml23_ep0_es2.out OK
411: splazers -sm 23 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml23_ep1_es0.out OK
411: splazers -sm 23 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml23_ep1_es1.out OK
411: splazers -sm 23 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml23_ep1_es2.out OK
411: splazers -sm 24 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml24_ep0_es0.out OK
411: splazers -sm 24 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml24_ep0_es1.out OK
411: splazers -sm 24 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml24_ep0_es2.out OK
411: splazers -sm 24 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml24_ep1_es0.out OK
411: splazers -sm 24 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml24_ep1_es1.out OK
411: splazers -sm 24 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml24_ep1_es2.out OK
411: splazers -sm 25 -ep 0 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml25_ep0_es0.out OK
411: splazers -sm 25 -ep 0 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml25_ep0_es1.out OK
411: splazers -sm 25 -ep 0 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml25_ep0_es2.out OK
411: splazers -sm 25 -ep 1 -es 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml25_ep1_es0.out OK
411: splazers -sm 25 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml25_ep1_es1.out OK
411: splazers -sm 25 -ep 1 -es 2 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml25_ep1_es2.out OK
411: splazers -r -id -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-r_ep1_es1.out OK
411: splazers -f -id -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-f_ep1_es1.out OK
411: splazers -i 90 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i90_ep1_es1.out OK
78: test_journaled_string_tree_find_horspool OK
395: DELETING TEMP DIR /tmp/tmp1dmhr5n6
395: Executing test for micro_razers
395: ===============================
395: 
395: micro_razers /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_default.razers OK
395: micro_razers -sL 14 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl14.razers OK
395: micro_razers -sL 14 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl14.sam OK
395: micro_razers -sL 14 -sE /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl14_se.razers OK
395: micro_razers -sL 15 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl15.razers OK
395: micro_razers -sL 15 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl15.sam OK
395: micro_razers -sL 15 -sE /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl15_se.razers OK
395: micro_razers -sL 16 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl16.razers OK
395: micro_razers -sL 16 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl16.sam OK
395: micro_razers -sL 16 -sE /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl16_se.razers OK
395: micro_razers -sL 17 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl17.razers OK
395: micro_razers -sL 17 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl17.sam OK
395: micro_razers -sL 17 -sE /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl17_se.razers OK
395: micro_razers -sL 18 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl18.razers OK
395: micro_razers -sL 18 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl18.sam OK
395: micro_razers -sL 18 -sE /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl18_se.razers OK
395: micro_razers -sL 19 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl19.razers OK
395: micro_razers -sL 19 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl19.sam OK
395: micro_razers -sL 19 -sE /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl19_se.razers OK
395: micro_razers -sL 20 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl20.razers OK
395: micro_razers -sL 20 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl20.sam OK
395: micro_razers -sL 20 -sE /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl20_se.razers OK
395: micro_razers -sL 18 -m 20 -pa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmp1dmhr5n6/se-adeno-reads36_1_sl18_m20_pa.razers OK
395: ==============================
395:      total tests: 23
395:     failed tests: 0
395: successful tests: 23
395: ==============================
405/414 Test #395: app_test_micro_razers .............................................................   Passed   25.65 sec
411: DELETING TEMP DIR /tmp/tmpe0hlb3p4
411: splazers -i 91 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i91_ep1_es1.out OK
411: splazers -i 92 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i92_ep1_es1.out OK
411: splazers -i 93 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i93_ep1_es1.out OK
411: splazers -i 94 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i94_ep1_es1.out OK
411: splazers -i 95 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i95_ep1_es1.out OK
411: splazers -i 96 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i96_ep1_es1.out OK
411: splazers -i 97 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i97_ep1_es1.out OK
411: splazers -i 98 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i98_ep1_es1.out OK
411: splazers -i 99 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-i99_ep1_es1.out OK
411: splazers -of 3 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-of3_ep1_es1.out OK
411: splazers -of 4 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-of4_ep1_es1.out OK
411: splazers -so 0 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-so0_ep1_es1.out OK
411: splazers -so 1 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpe0hlb3p4/se-adeno-reads100_1_mml20-so1_ep1_es1.out OK
411: splazers -an /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/splazers/tests/adeno-reads-pe.sam -o /tmp/tmpe0hlb3p4/anchored_adeno_example100.out -ll 300 -le 90 OK
411: ==============================
411:      total tests: 78
411:     failed tests: 0
411: successful tests: 78
411: ==============================
406/414 Test #411: app_test_splazers .................................................................   Passed   12.57 sec
390: DELETING TEMP DIR /tmp/tmp1c3g7n7c
390: Executing test for bs_tools
390: =========================
390: 
390: bisar -e3 4 -e4 5 -o /tmp/tmp1c3g7n7c/reads_se_N6000_0.CT_GA.verified.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.fastq
390: OK
390: bisar -gas -4.5 -ges -2.0 -der 0.001 -bsc 0.99 -gmr 0.5 -i 0.8 -rn 0.001 -pms 0.9 -e3 4 -e4 5 -o /tmp/tmp1c3g7n7c/reads_se_N6000_1.CT_GA.verified.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.fastq
390: OK
390: bisar -nse -nsi -nsd -gas -4.5 -ges -2.0 -der 0.001 -bsc 0.99 -gmr 0.5 -i 0.8 -rn 0.001 -pms 0.9 -e3 4 -e4 5 -o /tmp/tmp1c3g7n7c/reads_se_N6000_2.CT_GA.verified.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.fastq
390: OK
390: bisar -nse -nsi -nsd -gas -4.5 -ges -2.0 -der 0.001 -bsc 0.99 -gmr 0.2 -i 0.8 -rn 0.001 -pms 0.9 -e3 4 -e4 5 -o /tmp/tmp1c3g7n7c/reads_se_N6000_3.CT_GA.verified.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.fastq
390: OK
390: bisar -nse -nsi -nsd -gas -4.5 -ges -2.0 -der 0.001 -bsc 0.99 -gmr 0.8 -i 0.8 -rn 0.001 -pms 0.9 -e3 4 -e4 5 -o /tmp/tmp1c3g7n7c/reads_se_N6000_4.CT_GA.verified.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000.fastq
390: OK
390: bisar -e3 4 -e4 5 -o /tmp/tmp1c3g7n7c/reads_pe_N6000_0.CT_GA.verified.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_pe_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_pe_N6000.L.fastq /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_pe_N6000.R.fastq
390: OK
390: casbar -nec -mc 6 -msc 5 -mpc 0.5 -hes 0.005 -o /tmp/tmp1c3g7n7c/snps_se_0.vcf -b /tmp/tmp1c3g7n7c/meths_se_0.bed /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000_2.CT_GA.verified.pos_so.sam
390: OK
390: casbar -nec -mc 2 -msc 3 -mpc 0.5 -hes 0.005 -o /tmp/tmp1c3g7n7c/snps_se_1.vcf -b /tmp/tmp1c3g7n7c/meths_se_1.bed /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_se_N6000_2.CT_GA.verified.pos_so.sam
390: OK
390: casbar -nec -mc 6 -msc 5 -mpc 0.5 -hes 0.005 -o /tmp/tmp1c3g7n7c/snps_pe_0.vcf -b /tmp/tmp1c3g7n7c/meths_pe_0.bed /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/bs_tools/tests/reads_pe_N6000_0.CT_GA.verified.pos_so.sam
390: OK
390: ==============================
390:      total tests: 9
390:     failed tests: 0
390: successful tests: 9
390: ==============================
407/414 Test #390: app_test_bs_tools .................................................................   Passed   28.72 sec
410: DELETING TEMP DIR /tmp/tmpm_gn8pz_
410: Executing test for snp_store
410: =========================
410: 
410: snp_store /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-reads2.gff -o /tmp/tmpm_gn8pz_/snps_default.vcf -id /tmp/tmpm_gn8pz_/indels_default.gff OK
410: snp_store /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-reads2.sam -re -o /tmp/tmpm_gn8pz_/snps_realign.vcf -id /tmp/tmpm_gn8pz_/indels_realign.gff OK
410: snp_store /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-reads2.sam -it 1 -re -oa -mp 1 -m maq -hq -o /tmp/tmpm_gn8pz_/snps_realign_m1mp1oa.vcf -id /tmp/tmpm_gn8pz_/indels_realign_m1mp1oa.gff OK
410: snp_store /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-reads2.gff -it 2 -re -oa -mp 1 -hq -o /tmp/tmpm_gn8pz_/snps_realign_m0mp1oa.vcf -id /tmp/tmpm_gn8pz_/indels_realign_m0mp1oa.gff OK
410: snp_store /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/snp_store/tests/human-reads2.sam -it 1 -ipt 0.1 -osc -re -oa -hq -o /tmp/tmpm_gn8pz_/snps_realign_m0mp1oa_it1ipt01.vcf -id /tmp/tmpm_gn8pz_/indels_realign_m0mp1oa_it1ipt01.gff OK
410: ==============================
410:      total tests: 5
410:     failed tests: 0
410: successful tests: 5
410: ==============================
408/414 Test #410: app_test_snp_store ................................................................   Passed   18.94 sec
400: DELETING TEMP DIR /tmp/tmp667aziso
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-of3.gff OK
400: razers --low-memory -id -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-so0.razers OK
400: razers --low-memory -id -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmp667aziso/pe-adeno-reads36_2-id-so1.razers OK
400: razers --low-memory /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id.razers OK
400: razers --low-memory -id -r /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-r.razers OK
400: razers --low-memory -id -f /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-f.razers OK
400: razers --low-memory -id -i 90 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i90.razers OK
400: razers --low-memory -id -i 91 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i91.razers OK
400: razers --low-memory -id -i 92 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i92.razers OK
400: razers --low-memory -id -i 93 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i93.razers OK
400: razers --low-memory -id -i 94 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i94.razers OK
400: razers --low-memory -id -i 95 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i95.razers OK
400: razers --low-memory -id -i 96 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i96.razers OK
400: razers --low-memory -id -i 97 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i97.razers OK
400: razers --low-memory -id -i 98 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i98.razers OK
400: razers --low-memory -id -i 99 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i99.razers OK
400: razers --low-memory -id -i 100 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-i100.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-of0.razers OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-of1.fa OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-of2.eland OK
400: razers --low-memory -id /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-of3.gff OK
400: razers --low-memory -id -so 0 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-so0.razers OK
400: razers --low-memory -id -so 1 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmp667aziso/pe-adeno-reads100_2-id-so1.razers OK
400: ==============================
400:      total tests: 84
400:     failed tests: 0
400: successful tests: 84
400: ==============================
409/414 Test #400: app_test_razers ...................................................................   Passed   35.55 sec
412: Executing test for stellar
412: =========================
412: 
412: stellar -e 0.1 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmp6qvs3u0v/e-1.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq1_e-1.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq2_e-1.fa
412: OK
412: stellar -e 0.05 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmp6qvs3u0v/5e-2.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq1_5e-2.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq2_5e-2.fa
412: OK
412: stellar -e 0.025 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmp6qvs3u0v/25e-3.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq1_25e-3.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq2_25e-3.fa
412: OK
412: stellar -e 0.075 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmp6qvs3u0v/75e-3.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq1_75e-3.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq2_75e-3.fa
412: OK
412: stellar -e 0.0001 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmp6qvs3u0v/e-4.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq1_e-4.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq2_e-4.fa
412: OK
412: stellar -e 0.05 -l 20 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmp6qvs3u0v/minLen20.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq1_5e-2.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq2_5e-2.fa
412: OK
412: stellar -e 0.05 -l 150 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmp6qvs3u0v/minLen150.gff /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq1_5e-2.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq2_5e-2.fa
412: OK
412: stellar -e 0.05 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmp6qvs3u0v/5e-2.txt /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq1_5e-2.fa /build/reproducible-path/seqan2-2.4.0+dfsg/apps/stellar/tests/512_simSeq2_5e-2.fa
412: OK
412: ==============================
412:      total tests: 8
412:     failed tests: 0
412: successful tests: 8
412: ==============================
410/414 Test #412: app_test_stellar ..................................................................   Passed   24.77 sec
78: test_journaled_string_tree_find_shiftand OK
392: DELETING TEMP DIR /tmp/tmpm6mmgk7y
392: Executing test for fiona
392: ========================
392: 
392: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/compute_gain -g /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/genome.10k.fa --pre /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/reads.illumina.sam --post /tmp/tmpm6mmgk7y/reads.illumina.corrected.i1.fa
392: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/fiona_illumina -nt 1 -i 1 -g 10000 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/reads.illumina.fq /tmp/tmpm6mmgk7y/reads.illumina.corrected.i1.fa
392: OK
392: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/compute_gain -g /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/genome.10k.fa --pre /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/reads.illumina.sam --post /tmp/tmpm6mmgk7y/reads.illumina.corrected.i2.fa
392: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/fiona_illumina -nt 1 -i 2 -g 10000 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/reads.illumina.fq /tmp/tmpm6mmgk7y/reads.illumina.corrected.i2.fa
392: OK
392: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/compute_gain -g /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/genome.10k.fa --pre /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/reads.454.sam --post /tmp/tmpm6mmgk7y/reads.454.corrected.i1.fa
392: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/fiona -nt 1 -i 1 -g 10000 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/reads.454.fq /tmp/tmpm6mmgk7y/reads.454.corrected.i1.fa
392: OK
392: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/compute_gain -g /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/genome.10k.fa --pre /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/reads.454.sam --post /tmp/tmpm6mmgk7y/reads.454.corrected.i2.fa
392: /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/fiona -nt 1 -i 2 -g 10000 /build/reproducible-path/seqan2-2.4.0+dfsg/apps/fiona/tests/reads.454.fq /tmp/tmpm6mmgk7y/reads.454.corrected.i2.fa
392: OK
392: ==============================
392:      total tests: 4
392:     failed tests: 0
392: successful tests: 4
392: ==============================
411/414 Test #392: app_test_fiona ....................................................................   Passed   58.80 sec
78: test_journaled_string_tree_find_shiftor OK
391: DELETING TEMP DIR /tmp/tmp4uxnx6hp
391: Executing test for dfi
391: ======================
391: 
391: dfi /tmp/tmp4uxnx6hp/datasets/bbe.fa /tmp/tmp4uxnx6hp/datasets/kjv.fa --support 0.002 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/bbe.fa /tmp/tmp4uxnx6hp/datasets/kjv.fa --minmax 155 31102 --minmax 1 15551 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.002 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --minmax 10 2000 --minmax 1 1500 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.0005 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.001 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.01 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.1 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.5 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.9 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 1 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.002 --growth 1 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.002 --growth 2 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/CompWindows.fa /tmp/tmp4uxnx6hp/datasets/CompNonWindows.fa --support 0.002 --growth 5 -m OK
391: dfi /tmp/tmp4uxnx6hp/datasets/fasta1.fa /tmp/tmp4uxnx6hp/datasets/fasta2.fa --support 1 --growth 2 OK
391: ==============================
391:      total tests: 15
391:     failed tests: 0
391: successful tests: 15
391: ==============================
412/414 Test #391: app_test_dfi ......................................................................   Passed   76.23 sec
78: test_journaled_string_tree_find_myers OK
78: **************************************
78:  Total Tests: 4
78:  Skipped:     0
78:  Errors:      0
78: **************************************
413/414 Test  #78: test_journaled_string_tree_find ...................................................   Passed   95.99 sec
399: DELETING TEMP DIR /tmp/tmpikrhabz7
399: Executing test for rabema
399: =========================
399: 
399: rabema_prepare_sam -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/gold-adeno-hamming-08.sam -o /tmp/tmpikrhabz7/gold-adeno-hamming-08.by_qname.sam OK
399: rabema_prepare_sam -i /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/gold-adeno-edit-08.sam -o /tmp/tmpikrhabz7/gold-adeno-edit-08.by_qname.sam OK
399: rabema_build_gold_standard --distance-metric hamming -e 8 -o /tmp/tmpikrhabz7/gold-adeno-hamming-08.gsi --reference /tmp/tmpikrhabz7/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/gold-adeno-hamming-08.by_coordinate.sam OK
399: rabema_build_gold_standard --distance-metric edit -e 8 -o /tmp/tmpikrhabz7/gold-adeno-edit-08.gsi --reference /tmp/tmpikrhabz7/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/gold-adeno-edit-08.by_coordinate.sam OK
399: rabema_evaluate --distance-metric hamming -e 8 --reference /tmp/tmpikrhabz7/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/razers2-adeno-hamming-08.sam --in-gsi /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/gold-adeno-hamming-08.gsi OK
399: rabema_evaluate --distance-metric hamming -e 8 --reference /tmp/tmpikrhabz7/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/razers2-adeno-hamming-04.sam --in-gsi /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/gold-adeno-hamming-08.gsi OK
399: rabema_evaluate --distance-metric edit -e 8 --reference /tmp/tmpikrhabz7/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/razers2-adeno-edit-08.sam --in-gsi /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/gold-adeno-edit-08.gsi OK
399: rabema_evaluate --distance-metric edit -e 8 --reference /tmp/tmpikrhabz7/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/razers2-adeno-edit-04.sam --in-gsi /build/reproducible-path/seqan2-2.4.0+dfsg/apps/rabema/tests/gold-adeno-edit-08.gsi OK
399: ==============================
399:      total tests: 8
399:     failed tests: 0
399: successful tests: 8
399: ==============================
414/414 Test #399: app_test_rabema ...................................................................   Passed   89.88 sec

100% tests passed, 0 tests failed out of 414

Total Test time (real) =  98.89 sec
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
	rm -fr -- /tmp/dh-xdg-rundir-t4h0XVha
   create-stamp debian/debhelper-build-stamp
   dh_prep
	rm -f -- debian/seqan-apps.substvars debian/libseqan2-dev.substvars
	rm -fr -- debian/.debhelper/generated/seqan-apps/ debian/seqan-apps/ debian/tmp/ debian/.debhelper/generated/libseqan2-dev/ debian/libseqan2-dev/
	rm -f debian/seqan-apps.debhelper.log
   debian/rules override_dh_auto_install-indep
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
dh_auto_install --indep -B build --destdir=/build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/
	install -m0755 -d /build/reproducible-path/seqan2-2.4.0\+dfsg/debian/libseqan2-dev
	cd build && make -j12 install DESTDIR=/build/reproducible-path/seqan2-2.4.0\+dfsg/debian/libseqan2-dev AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/build'
/usr/bin/cmake -S/build/reproducible-path/seqan2-2.4.0+dfsg -B/build/reproducible-path/seqan2-2.4.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/build'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/build'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/share/doc/seqan/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/share/doc/seqan/README.rst
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/share/doc/seqan/CHANGELOG.rst
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/share/pkgconfig/seqan-2.pc
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/share/cmake/seqan/seqan-config.cmake
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/align_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/align_cols.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/align_config.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/align_interface_wrapper.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/align_iterator_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/align_metafunctions.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/align_traceback.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/aligned_sequence_concept.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/alignment_algorithm_tags.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/alignment_operations.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_algorithm_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_align_simd_helper.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_band.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_cell.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_cell_affine.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_cell_dynamic.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_cell_linear.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_context.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_formula.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_formula_affine.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_formula_dynamic.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_formula_linear.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_matrix.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_matrix_navigator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_matrix_navigator_score_matrix.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_matrix_navigator_score_matrix_sparse.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_matrix_navigator_trace_matrix.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_matrix_sparse.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_meta_info.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_profile.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_scout.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_scout_simd.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_setup.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_trace_segment.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_traceback_adaptor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/dp_traceback_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/evaluate_alignment.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/fragment.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/gap_anchor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/gapped_value_type.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/gaps_anchor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/gaps_array.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/gaps_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/gaps_iterator_anchor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/gaps_iterator_array.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/gaps_iterator_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/global_alignment_banded.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/global_alignment_hirschberg_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/global_alignment_myers_hirschberg_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/global_alignment_myers_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/global_alignment_specialized.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/global_alignment_unbanded.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/local_alignment_banded.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/local_alignment_banded_waterman_eggert_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/local_alignment_enumeration.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/local_alignment_enumeration_banded.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/local_alignment_enumeration_unbanded.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/local_alignment_unbanded.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/local_alignment_waterman_eggert_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align/matrix_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_extend.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_extend/align_extend.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_extend/align_extend_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_extend/dp_scout_xdrop.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/async_wave_execution_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/dp_kernel_adaptor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/dp_parallel_execution_policies.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/dp_parallel_scout.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/dp_parallel_scout_simd.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/dp_settings.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/dp_traits.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/parallel_align_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_alignment_executor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_alignment_result.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_alignment_scheduler.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_alignment_task.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_alignment_thread_local_storage.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_task.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_task_event.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_task_executor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_task_queue.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_task_scheduler.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_parallel/wavefront_task_util.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_profile.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_profile/add_to_profile.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_profile/score_profile_seq.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_split.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_split/align_split_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/align_split/dp_scout_split.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/alignment_free.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/alignment_free/af_d2.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/alignment_free/af_d2star.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/alignment_free/af_d2z.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/alignment_free/af_n2.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/alignment_free/alignment_free_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/alignment_free/alignment_free_comparison.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/alignment_free/kmer_functions.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/arg_parse_argument.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/arg_parse_ctd_support.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/arg_parse_doc.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/arg_parse_exceptions.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/arg_parse_option.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/arg_parse_parse.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/arg_parse_type_support.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/arg_parse_version_check.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/argument_parser.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/tool_doc.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/arg_parse/xml_support.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/bam_alignment_record.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/bam_alignment_record_util.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/bam_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/bam_header_record.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/bam_index_bai.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/bam_io_context.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/bam_sam_conversion.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/bam_scanner_cache.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/bam_tags_dict.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/cigar.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/read_bam.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/read_sam.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/write_bam.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bam_io/write_sam.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/aggregate_concept.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/allocator_chunkpool.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/allocator_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/allocator_multipool.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/allocator_simple.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/allocator_singlepool.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/allocator_to_std.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_adapt_builtins.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_bio.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_concept.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_math.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_profile.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_qualities.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_residue.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_residue_funcs.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_residue_tabs.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_simple_type.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/alphabet_storage.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/array_construct_destruct.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_aggregate.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_allocator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_alphabet.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_concept.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_container.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_debug.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_device.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_exception.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_functors.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_fundamental.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_math.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_metaprogramming.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_parallelism.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_proxy.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_smart_pointer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_stream.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_tangle.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_type.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/basic_view.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/boost_preprocessor_subset.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/builtin_functions.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/concept_checking.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/container_concept.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/debug_helper.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/debug_test_system.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/fundamental_chunking.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/fundamental_comparison.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/fundamental_concepts.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/fundamental_conversion.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/fundamental_metafunctions.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/fundamental_tags.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/fundamental_transport.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/holder_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/holder_simple.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/holder_tristate.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/hosted_type_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_adapt_pointer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_adapt_std.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_adaptor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_concept.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_counting.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_position.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_range.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/iterator_zip.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/macro_deprecated.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/math_functions.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/math_log_space_value.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/metaprogramming_control.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/metaprogramming_enable_if.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/metaprogramming_logic.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/metaprogramming_math.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/metaprogramming_type.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/metaprogramming_type_algebra.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/pair_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/pair_bit_compressed.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/pair_packed.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/profiling.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/property_map_concept.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/proxy_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/proxy_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/test_system.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/triple_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/triple_packed.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/tuple_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/tuple_bit_compressed.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/basic/volatile_ptr.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bed_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bed_io/bed_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bed_io/bed_record.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bed_io/read_bed.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/bed_io/write_bed.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast/blast_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast/blast_io_context.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast/blast_record.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast/blast_report_out.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast/blast_statistics.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast/blast_tabular.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast/blast_tabular_in.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast/blast_tabular_lowlevel.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/blast/blast_tabular_out.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/consensus_aligner.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/consensus_aligner_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/consensus_alignment_options.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/consensus_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/consensus_builder.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/consensus_library.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/consensus_realign.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/consensus_score.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/overlap_info_computation.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/consensus/overlapper.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/file/file_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/file/file_cstyle.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/file/file_forwards.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/file/file_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/file/file_mapping.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/file/file_page.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/file/string_external.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/file/string_mmap.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_abndm.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_ahocorasick.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_begin.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_bndm.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_bom.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_hamming_simple.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_horspool.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_lambda.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_multi.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_multiple_bfam.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_multiple_shiftand.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_myers_ukkonen.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_pattern_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_pex.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_score.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_set_horspool.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_shiftand.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_shiftor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_simple.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_wild_shiftand.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/find/find_wumanber.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/gff_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/gff_io/gff_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/gff_io/gff_io_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/all_pairs_shortest_path.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/bellman_ford.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/bipartite_matching.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/breadth_first_search.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/connected_components.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/depth_first_search.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/dijkstra.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/floyd_warshall.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/ford_fulkerson.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/graph_algorithm_heap_tree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/graph_algorithm_hmm.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/graph_algorithm_lis_his.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/kruskal.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/maximum_weighted_matching.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/path_growing.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/prim.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/single_source_shortest_path.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/strongly_connected_compnents.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/topological_sort.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/transitive_closure.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/weakly_connected_components.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_algorithms/weighted_bipartite_matching.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_algorithm_refine_align.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_algorithm_refine_aligngraph.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_algorithm_refine_annotation.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_algorithm_refine_exact.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_algorithm_refine_exact_iterative.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_algorithm_refine_fragment.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_algorithm_refine_inexact.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_algorithm_refine_scoring.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_impl_align.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_align/graph_impl_align_adapt.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa/graph_align_tcoffee_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa/graph_align_tcoffee_distance.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa/graph_align_tcoffee_guidetree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa/graph_align_tcoffee_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa/graph_align_tcoffee_kmer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa/graph_align_tcoffee_library.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa/graph_align_tcoffee_msa.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa/graph_align_tcoffee_progressive.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_msa/graph_align_tcoffee_refinement.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_drawing.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_edgestump.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_idmanager.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_impl_automaton.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_impl_directed.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_impl_hmm.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_impl_oracle.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_impl_tree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_impl_trie.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_impl_undirected.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_impl_wordgraph.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_iterator_adjacency.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_iterator_bfs.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_iterator_dfs.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_iterator_edge.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_iterator_outedge.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_iterator_vertex.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/graph_utility_parsing.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/property_map_generic.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/property_map_internal.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/graph_types/property_map_internal_pointer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find2_backtracking.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find2_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find2_functors.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find2_index.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find2_index_approx.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find2_index_multi.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find2_vstree_factory.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_backtracking.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_index.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_index_approx.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_index_binary.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_index_esa.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_index_lambda.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_index_qgram.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_pigeonhole.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_quasar.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/find_swift.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_bidirectional.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_bidirectional_stree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_bifm.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_bifm_stree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_bwt.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_childtab.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_device.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_dfi.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_esa_algs.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_esa_algs_multi.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_esa_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_esa_drawing.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_esa_stree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_compressed_sa.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_compressed_sa_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_dox.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_lf_table.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_rank_dictionary_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_rank_dictionary_levels.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_rank_dictionary_naive.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_rank_dictionary_wt.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_right_array_binary_tree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_right_array_binary_tree_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_sparse_string.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_fm_stree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_forwards.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_lcp.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_lcp_tree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_pizzachili.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_pizzachili_find.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_pizzachili_string.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_qgram.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_qgram_bucketrefinement.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_qgram_openaddressing.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_qgram_stree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_sa_btree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_sa_bwtwalk.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_sa_lss.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_sa_mm.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_sa_qsort.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_sa_stree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_sa_truncated.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_shawarma.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_shims.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_skew3.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_skew7.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_skew7_multi.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_view.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/index_wotd.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/pipe_merger3.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/pipe_merger7.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/pizzachili_api.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/pump_extender3.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/pump_extender7.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/pump_lcp_core.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/pump_separator7.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/radix.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/repeat_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/shape_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/shape_gapped.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/shape_minimizer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/shape_onegapped.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/shape_predefined.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/index/shape_threshold.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/journal_alignment_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/journal_alignment_traceback_adaptor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/journaled_set_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/journaled_set_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/journaled_set_join.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/journaled_set_join_config.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/journaled_set_join_global_align_compact.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/journaled_set_join_global_align_manhatten.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/journaled_set_journal_trace_descriptor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_set/score_biaffine.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/delta_map.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/delta_map_entry.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/delta_map_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/delta_store.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/journaled_string_tree_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/journaled_string_tree_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/journaled_string_tree_sequence_buffer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/journaled_string_tree_traverser.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/journaled_string_tree_traverser_node.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/journaled_string_tree_traverser_util.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/jst_extension_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/jst_extension_horspool.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/jst_extension_myers_ukkonen.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/jst_extension_shiftand.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/jst_extension_shiftor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/observable.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/journaled_string_tree/stack_observer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/map.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/map/map_adapter_stl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/map/map_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/map/map_chooser.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/map/map_skiplist.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/map/map_vector.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/map/sumlist.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/map/sumlist_mini.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/map/sumlist_skip.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/math.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/math/math_common_factor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/math/math_operators.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/math/math_rational.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/accumulators.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/bit_twiddling.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/bit_twiddling_functors.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/dequeue.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/edit_environment.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/interval_tree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/map.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/memset.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/name_store_cache.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/priority_type_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/priority_type_heap.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/set.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/svg.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/terminal.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/misc/union_find.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/cyclic_shape.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_alphabet.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_alphabet_expansion.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_cyclic_shape.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_functors.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_padding.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_position.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_reverse.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_shortcuts.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_string.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/modifier/modifier_view.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/enumerable_thread_local.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/enumerable_thread_local_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_algorithms.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_atomic_misc.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_atomic_primitives.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_lock.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_macros.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_queue.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_queue_suspendable.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_resource_pool.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_sequence.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_serializer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_splitting.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_tags.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parallel/parallel_thread_pool.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parse_lm.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parse_lm/local_match_store.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parse_lm/parse_blastn_tabular.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parse_lm/parse_lastz_general.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/parse_lm/parse_stellar_gff.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_caster.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_counter.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_echoer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_edit_environment.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_filter.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_joiner.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_namer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_sampler.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_shifter.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_source.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pipe_tupler.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pool_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pool_mapper.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/pipe/pool_sorter.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/platform.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/random.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/random/random_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/random/random_beta.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/random/random_util.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/realign.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/realign/realign_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/realign/realign_helper_functions.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_base_late.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_buchfink11_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_buchfink11_tables.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_cannata10_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_cannata10_tables.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_cluster_red_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_cluster_red_tables_20_to_n_b62.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_cluster_red_tables_22_to_n_b62.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_cluster_red_tables_24_to_n_b62.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_li10_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_li10_tables.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_murphy10_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_murphy10_tables.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_murphy5_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_murphy5_tables.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_solis10_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/reduced_aminoacid/reduced_aminoacid_solis10_tables.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/bpseq_read_write.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/connect_read_write.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/dot_bracket_read_write.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/ebpseq_read_write.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/rna_header.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/rna_io_context.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/rna_record.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/rna_struct_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/stockholm_read_write.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/rna_io/vienna_read_write.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/roi_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/roi_io/read_roi.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/roi_io/roi_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/roi_io/roi_io_context.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/roi_io/roi_record.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/roi_io/write_roi.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/score.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/score/score_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/score/score_edit.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/score/score_matrix.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/score/score_matrix_data.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/score/score_matrix_dyn.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/score/score_matrix_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/score/score_simd_wrapper.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/score/score_simple.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/banded_chain_alignment.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/banded_chain_alignment_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/banded_chain_alignment_profile.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/banded_chain_alignment_scout.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/banded_chain_alignment_traceback.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/basic_iter_indirect.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_combination.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_extension.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_global_chaining.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_global_chaining_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_global_chaining_gusfield.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_seed_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_seed_chained.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_seed_diagonal.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_seed_set_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_seed_set_non_scored.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_seed_set_scored.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_seed_set_unordered.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seeds/seeds_seed_simple.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seq_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seq_io/bam_sam.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seq_io/fai_index.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seq_io/fasta_fastq.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seq_io/genomic_region.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seq_io/read_embl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seq_io/read_genbank.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/seq_io/sequence_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/adapt_array_pointer.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/adapt_stl_container.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/container_view.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/container_view_zip.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/iter_concat_virtual.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/segment_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/segment_infix.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/segment_prefix.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/segment_suffix.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/segment_utils.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/sequence_concatenator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/sequence_forwards.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/sequence_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/sequence_lexical.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/sequence_shortcuts.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_alloc.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_array.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_block.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_cstyle.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_packed.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_packed_old.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_set_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_set_concat_direct.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_set_dependent_generous.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_set_dependent_tight.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_set_owner.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_set_segment.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence/string_set_view.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence_journaled.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence_journaled/journal_entries_sorted_array.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence_journaled/journal_entry.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence_journaled/sequence_journaled.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence_journaled/sequence_journaled_iterator.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/sequence_journaled/sequence_journaled_iterator_fast.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simd.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simd/simd_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simd/simd_base_seqan_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simd/simd_base_seqan_impl_avx2.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simd/simd_base_seqan_impl_avx512.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simd/simd_base_seqan_impl_sse4.2.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simd/simd_base_seqan_interface.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simd/simd_base_umesimd_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simple_intervals_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simple_intervals_io/simple_intervals_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/simple_intervals_io/simple_intervals_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/statistics.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/statistics/statistics_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/statistics/statistics_markov_model.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_align.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_align_intervals.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_all.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_annotation.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_contig.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_intervaltree.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_io_gff.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_io_sam.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_io_ucsc.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_library.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_matepair.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/store/store_read.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/adapt_ios.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/buffered_stream.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/file_stream.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/formatted_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/guess_format.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/iostream_bgzf.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/iostream_bzip2.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/iostream_bzip2_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/iostream_zip.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/iostream_zip_impl.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/iostream_zutil.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/iter_stream.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/lexical_cast.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/stream_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/stream_compressor.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/tokenization.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/stream/virtual_stream.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/system.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/system/file_async.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/system/file_directory.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/system/file_forwards.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/system/file_sync.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/system/system_base.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/system/system_event_win.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/system/system_forwards.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/tabix_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/tabix_io/tabix_index_tbi.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/translation.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/translation/translation.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/translation/translation_tables.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/ucsc_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/ucsc_io/ucsc_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/ucsc_io/ucsc_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/ucsc_io/ucsc_record.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/vcf_io.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/vcf_io/read_vcf.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/vcf_io/vcf_file.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/vcf_io/vcf_header.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/vcf_io/vcf_header_record.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/vcf_io/vcf_io_context.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/vcf_io/vcf_record.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/vcf_io/write_vcf.h
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/include/seqan/version.h
make[2]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/build'
rm -Rf /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev/usr/share/doc/seqan
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
   dh_auto_install -Nlibseqan2-dev
	install -m0755 -d /build/reproducible-path/seqan2-2.4.0\+dfsg/debian/tmp
	cd obj-x86_64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/seqan2-2.4.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/seqan2-2.4.0+dfsg -B/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/alf
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/alf/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/alf/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/alf/example/small.fasta
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/bisar
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/casbar
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/four2three
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/bs_tools/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/bs_tools/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/dfi
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/dfi/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/dfi/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/dfi/example/fasta1.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/dfi/example/fasta2.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/fiona
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/fiona_illumina
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/compute_gain
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/fiona/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/fiona/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/fiona/example/reads.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/fx_bam_coverage
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/fx_tools/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/fx_tools/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/gustaf
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/gustaf_mate_joining
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/gustaf/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/gustaf/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/gustaf/example/adeno.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/gustaf/example/adeno_modified.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/gustaf/example/adeno_modified_reads.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/gustaf/example/stellar.gff
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/insegt
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/insegt/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/insegt/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/insegt/example/annoOutput.gff
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/insegt/example/annotations.gff
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/insegt/example/readOutput.gff
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/insegt/example/tupleOutput.gff
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/mason_frag_sequencing
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/mason_genome
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/mason_materializer
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/mason_methylation
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/mason_simulator
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/mason_splicing
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/mason_variator
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/README.mason_frag_sequencing
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/README.mason_genome
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/README.mason_materializer
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/README.mason_methylation
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/README.mason_simulator
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/README.mason_splicing
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/README.mason_variator
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/mason2/example/adeno_virus.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/micro_razers
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/micro_razers/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/micro_razers/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/micro_razers/example/genome.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/micro_razers/example/reads.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/micro_razers/example/reads.fa.result
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/bam2roi
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/roi_feature_projection
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/roi_plot_thumbnails
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/bed_sort.sh
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/gff_sort.sh
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/roi_sort.sh
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/roi_plot_9.sh
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/plot.awk
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/ps2pswLinks.gawk
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/ngs_roi/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/ngs_roi/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/ngs_roi/example/dmel.bed
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/ngs_roi/example/dmel.gtf
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/ngs_roi/example/example.bam
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/ngs_roi/R/ngsroi_0.1.tar.gz
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/ngs_roi/R/ngsroi_0.1.zip
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/pair_align
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/pair_align/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/pair_align/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/param_chooser
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/param_chooser/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/param_chooser/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/rabema_prepare_sam
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/rabema_build_gold_standard
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/rabema_evaluate
-- Up-to-date: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/rabema_prepare_sam
-- Up-to-date: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/rabema_build_gold_standard
-- Up-to-date: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/rabema_evaluate
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/rabema/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/rabema/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/razers
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers/example/genome.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers/example/reads.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers/example/reads2.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/razers3
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers3/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers3/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers3/example/genome.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers3/example/reads.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/razers3/example/reads2.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/rep_sep
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/rep_sep/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/rep_sep/README
Change Dir: '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile sak_doc
gmake[2]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
gmake[2]: warning: jobserver unavailable: using -j1.  Add '+' to parent make rule.
/usr/bin/cmake -S/build/reproducible-path/seqan2-2.4.0+dfsg -B/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/gmake  -f CMakeFiles/Makefile2 sak_doc
gmake[3]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/cmake -S/build/reproducible-path/seqan2-2.4.0+dfsg -B/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/CMakeFiles 1
/usr/bin/gmake  -f CMakeFiles/Makefile2 apps/sak/CMakeFiles/sak_doc.dir/all
gmake[4]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/gmake  -f CMakeFiles/seqan_library.dir/build.make CMakeFiles/seqan_library.dir/depend
gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/CMakeFiles/seqan_library.dir/DependInfo.cmake "--color="
gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/gmake  -f CMakeFiles/seqan_library.dir/build.make CMakeFiles/seqan_library.dir/build
gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
gmake[5]: Nothing to be done for 'CMakeFiles/seqan_library.dir/build'.
gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  0%] Built target seqan_library
/usr/bin/gmake  -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/depend
gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak/CMakeFiles/sak.dir/DependInfo.cmake "--color="
gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/gmake  -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/build
gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
gmake[5]: Nothing to be done for 'apps/sak/CMakeFiles/sak.dir/build'.
gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[  0%] Built target sak
/usr/bin/gmake  -f apps/sak/CMakeFiles/sak_doc.dir/build.make apps/sak/CMakeFiles/sak_doc.dir/depend
gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.4.0+dfsg /build/reproducible-path/seqan2-2.4.0+dfsg/apps/sak /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak/CMakeFiles/sak_doc.dir/DependInfo.cmake "--color="
gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/gmake  -f apps/sak/CMakeFiles/sak_doc.dir/build.make apps/sak/CMakeFiles/sak_doc.dir/build
gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[100%] Generating README.sak.txt
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak && ../../bin/sak --export-help=txt > README.sak.txt
[100%] Generating sak.1
cd /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/apps/sak && ../../bin/sak --export-help=man > sak.1
gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
[100%] Built target sak_doc
gmake[4]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
/usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0
gmake[3]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
gmake[2]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'

-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/sak
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sak/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sak/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sak/README.sak.txt
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/man/man1/sak.1
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/sam2matrix
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sam2matrix/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sam2matrix/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/samcat
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/samcat/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/samcat/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/s4_search
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/s4_join
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/searchjoin/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/searchjoin/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/seqan_tcoffee
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/seqan_tcoffee/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/seqan_tcoffee/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/seqan_tcoffee/example/seq.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/seqcons2
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/seqcons2/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/seqcons2/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/sgip
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/example/iso_m2D_m196.A01
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/example/iso_r01_m200.A00
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/example/iso_r01_m200.A01
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/example/iso_r01_m200.B00
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/example/iso_r01_m200.B01
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/example/latin-4
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/example/lattice-4
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/sgip/example/sts-7
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/snp_store
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/snp_store/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/snp_store/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/snp_store/example/exampleGenome.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/snp_store/example/exampleReads.gff
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/splazers
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/splazers/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/splazers/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/splazers/example/genome.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/splazers/example/reads.fa
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/splazers/example/reads.fa.result
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/stellar
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/stellar/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/stellar/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/stellar/example/NC_001474.fasta
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/stellar/example/NC_001477.fasta
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/stellar/example/reads.fasta
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/tree_recon
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/tree_recon/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/tree_recon/README
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/tree_recon/example/example.dist
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/yara_indexer
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/bin/yara_mapper
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/yara/LICENSE
-- Installing: /build/reproducible-path/seqan2-2.4.0+dfsg/debian/tmp/usr/share/doc/yara/README.rst
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu'
	rm -f debian/libseqan2-dev.debhelper.log
   debian/rules override_dh_install-arch
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
dh_install --arch
	install -m0755 -d debian/seqan-apps/usr/lib/seqan
	cp --reflink=auto -a debian/tmp/usr/bin debian/seqan-apps/usr/lib/seqan/
	install -m0755 -d debian/seqan-apps/usr/share/doc/seqan-apps
	cp --reflink=auto -a debian/tmp/usr/share/doc/alf debian/tmp/usr/share/doc/bs_tools debian/tmp/usr/share/doc/dfi debian/tmp/usr/share/doc/fiona debian/tmp/usr/share/doc/fx_tools debian/tmp/usr/share/doc/gustaf debian/tmp/usr/share/doc/insegt debian/tmp/usr/share/doc/mason2 debian/tmp/usr/share/doc/micro_razers debian/tmp/usr/share/doc/ngs_roi debian/tmp/usr/share/doc/pair_align debian/tmp/usr/share/doc/param_chooser debian/tmp/usr/share/doc/rabema debian/tmp/usr/share/doc/razers debian/tmp/usr/share/doc/razers3 debian/tmp/usr/share/doc/rep_sep debian/tmp/usr/share/doc/sak debian/tmp/usr/share/doc/sam2matrix debian/tmp/usr/share/doc/samcat debian/tmp/usr/share/doc/searchjoin debian/tmp/usr/share/doc/seqan_tcoffee debian/tmp/usr/share/doc/seqcons2 debian/tmp/usr/share/doc/sgip debian/tmp/usr/share/doc/snp_store debian/tmp/usr/share/doc/splazers debian/tmp/usr/share/doc/stellar debian/tmp/usr/share/doc/tree_recon debian/tmp/usr/share/doc/yara debian/seqan-apps/usr/share/doc/seqan-apps/
# Delete additional LICENSE files
find /build/reproducible-path/seqan2-2.4.0+dfsg/debian/seqan-apps -type f -name LICENSE -delete || /bin/true
find /build/reproducible-path/seqan2-2.4.0+dfsg/debian/seqan-apps/usr/lib/seqan/bin -type f \
	-name "*.sh" | xargs chmod a+x
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
	rm -f debian/seqan-apps.debhelper.log
   debian/rules override_dh_install-indep
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
dh_install --indep
# Delete additional LICENSE and compiled Python files
if [ -d /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev ] ; then \
    find /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev -type f -name LICENSE -delete ; \
    find /build/reproducible-path/seqan2-2.4.0+dfsg/debian/libseqan2-dev -type f -name "*.pyc" -delete ; \
fi
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
   dh_installdocs
	install -p -m0644 debian/README.Debian debian/seqan-apps/usr/share/doc/seqan-apps/README.Debian
	install -p -m0644 debian/copyright debian/seqan-apps/usr/share/doc/seqan-apps/copyright
	install -m0755 -d debian/libseqan2-dev/usr/share/doc/libseqan2-dev
	install -m0755 -d debian/libseqan2-dev/usr/share/doc/libseqan2-dev
	cp --reflink=auto -a ./README.rst debian/libseqan2-dev/usr/share/doc/libseqan2-dev
	chmod -R u\+rw,go=rX debian/libseqan2-dev/usr/share/doc
	install -p -m0644 debian/copyright debian/libseqan2-dev/usr/share/doc/libseqan2-dev/copyright
   dh_installchangelogs
	install -m0755 -d debian/libseqan2-dev/usr/share/doc/libseqan2-dev
	install -p -m0644 debian/.debhelper/generated/libseqan2-dev/dh_installchangelogs.dch.trimmed debian/libseqan2-dev/usr/share/doc/libseqan2-dev/changelog.Debian
	install -p -m0644 ./CHANGELOG.rst debian/libseqan2-dev/usr/share/doc/libseqan2-dev/changelog
	install -m0755 -d debian/seqan-apps/usr/share/doc/seqan-apps
	install -p -m0644 debian/.debhelper/generated/seqan-apps/dh_installchangelogs.dch.trimmed debian/seqan-apps/usr/share/doc/seqan-apps/changelog.Debian
	install -p -m0644 ./CHANGELOG.rst debian/seqan-apps/usr/share/doc/seqan-apps/changelog
	rm -f debian/libseqan2-dev.debhelper.log
   debian/rules override_dh_installman-arch
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
dh_link --arch
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/yara_mapper
	ln -s ../lib/seqan/bin/yara_mapper debian/seqan-apps/usr/bin/yara_mapper
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/yara_indexer
	ln -s ../lib/seqan/bin/yara_indexer debian/seqan-apps/usr/bin/yara_indexer
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/tree_recon
	ln -s ../lib/seqan/bin/tree_recon debian/seqan-apps/usr/bin/tree_recon
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/stellar
	ln -s ../lib/seqan/bin/stellar debian/seqan-apps/usr/bin/stellar
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/splazers
	ln -s ../lib/seqan/bin/splazers debian/seqan-apps/usr/bin/splazers
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/snp_store
	ln -s ../lib/seqan/bin/snp_store debian/seqan-apps/usr/bin/snp_store
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/seqan_tcoffee
	ln -s ../lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/bin/seqan_tcoffee
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/sak
	ln -s ../lib/seqan/bin/sak debian/seqan-apps/usr/bin/sak
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/razers3
	ln -s ../lib/seqan/bin/razers3 debian/seqan-apps/usr/bin/razers3
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/razers
	ln -s ../lib/seqan/bin/razers debian/seqan-apps/usr/bin/razers
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/rabema_prepare_sam
	ln -s ../lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/bin/rabema_prepare_sam
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/rabema_evaluate
	ln -s ../lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/bin/rabema_evaluate
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/rabema_build_gold_standard
	ln -s ../lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/bin/rabema_build_gold_standard
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/pair_align
	ln -s ../lib/seqan/bin/pair_align debian/seqan-apps/usr/bin/pair_align
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/micro_razers
	ln -s ../lib/seqan/bin/micro_razers debian/seqan-apps/usr/bin/micro_razers
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/mason_methylation
	ln -s ../lib/seqan/bin/mason_methylation debian/seqan-apps/usr/bin/mason_methylation
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/mason_materializer
	ln -s ../lib/seqan/bin/mason_materializer debian/seqan-apps/usr/bin/mason_materializer
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/mason_genome
	ln -s ../lib/seqan/bin/mason_genome debian/seqan-apps/usr/bin/mason_genome
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/mason_frag_sequencing
	ln -s ../lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/bin/mason_frag_sequencing
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/insegt
	ln -s ../lib/seqan/bin/insegt debian/seqan-apps/usr/bin/insegt
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/gustaf
	ln -s ../lib/seqan/bin/gustaf debian/seqan-apps/usr/bin/gustaf
	install -m0755 -d debian/seqan-apps/usr/bin
	rm -f debian/seqan-apps/usr/bin/alf
	ln -s ../lib/seqan/bin/alf debian/seqan-apps/usr/bin/alf
if [ -d /build/reproducible-path/seqan2-2.4.0+dfsg/debian/seqan-apps/usr/bin ] ; then \
	find /build/reproducible-path/seqan2-2.4.0+dfsg/debian/seqan-apps/usr/bin -type l -xtype l -delete ; \
fi
/build/reproducible-path/seqan2-2.4.0+dfsg/debian/generate_manpages
dh_installman --arch
	install -m0755 -d debian/seqan-apps/usr/share/man/man1/
	install -p -m0644 debian/tmp/usr/share/man/man1/sak.1 debian/seqan-apps/usr/share/man/man1/sak.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/alf.1 debian/seqan-apps/usr/share/man/man1/gustaf.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/insegt.1 debian/seqan-apps/usr/share/man/man1/mason_frag_sequencing.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/mason_genome.1 debian/seqan-apps/usr/share/man/man1/mason_materializer.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/mason_methylation.1 debian/seqan-apps/usr/share/man/man1/micro_razers.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/pair_align.1 debian/seqan-apps/usr/share/man/man1/rabema_build_gold_standard.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/rabema_evaluate.1 debian/seqan-apps/usr/share/man/man1/rabema_prepare_sam.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/razers.1 debian/seqan-apps/usr/share/man/man1/razers3.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/snp_store.1 debian/seqan-apps/usr/share/man/man1/splazers.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/sak.1 debian/seqan-apps/usr/share/man/man1/seqan_tcoffee.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/yara_indexer.1 debian/seqan-apps/usr/share/man/man1/yara_mapper.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/stellar.1 debian/seqan-apps/usr/share/man/man1/tree_recon.1
	mv debian/seqan-apps/usr/share/man/man1/mason_methylation.1.dh-new debian/seqan-apps/usr/share/man/man1/mason_methylation.1
	mv debian/seqan-apps/usr/share/man/man1/micro_razers.1.dh-new debian/seqan-apps/usr/share/man/man1/micro_razers.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/mason_methylation.1 debian/seqan-apps/usr/share/man/man1/micro_razers.1
	mv debian/seqan-apps/usr/share/man/man1/pair_align.1.dh-new debian/seqan-apps/usr/share/man/man1/pair_align.1
	mv debian/seqan-apps/usr/share/man/man1/rabema_build_gold_standard.1.dh-new debian/seqan-apps/usr/share/man/man1/rabema_build_gold_standard.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/pair_align.1 debian/seqan-apps/usr/share/man/man1/rabema_build_gold_standard.1
	mv debian/seqan-apps/usr/share/man/man1/razers.1.dh-new debian/seqan-apps/usr/share/man/man1/razers.1
	mv debian/seqan-apps/usr/share/man/man1/razers3.1.dh-new debian/seqan-apps/usr/share/man/man1/razers3.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/razers.1 debian/seqan-apps/usr/share/man/man1/razers3.1
	mv debian/seqan-apps/usr/share/man/man1/insegt.1.dh-new debian/seqan-apps/usr/share/man/man1/insegt.1
	mv debian/seqan-apps/usr/share/man/man1/mason_frag_sequencing.1.dh-new debian/seqan-apps/usr/share/man/man1/mason_frag_sequencing.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/insegt.1 debian/seqan-apps/usr/share/man/man1/mason_frag_sequencing.1
	mv debian/seqan-apps/usr/share/man/man1/rabema_evaluate.1.dh-new debian/seqan-apps/usr/share/man/man1/rabema_evaluate.1
	mv debian/seqan-apps/usr/share/man/man1/rabema_prepare_sam.1.dh-new debian/seqan-apps/usr/share/man/man1/rabema_prepare_sam.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/rabema_evaluate.1 debian/seqan-apps/usr/share/man/man1/rabema_prepare_sam.1
	mv debian/seqan-apps/usr/share/man/man1/alf.1.dh-new debian/seqan-apps/usr/share/man/man1/alf.1
	mv debian/seqan-apps/usr/share/man/man1/gustaf.1.dh-new debian/seqan-apps/usr/share/man/man1/gustaf.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/alf.1 debian/seqan-apps/usr/share/man/man1/gustaf.1
	mv debian/seqan-apps/usr/share/man/man1/mason_genome.1.dh-new debian/seqan-apps/usr/share/man/man1/mason_genome.1
	mv debian/seqan-apps/usr/share/man/man1/mason_materializer.1.dh-new debian/seqan-apps/usr/share/man/man1/mason_materializer.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/mason_genome.1 debian/seqan-apps/usr/share/man/man1/mason_materializer.1
	mv debian/seqan-apps/usr/share/man/man1/yara_indexer.1.dh-new debian/seqan-apps/usr/share/man/man1/yara_indexer.1
	mv debian/seqan-apps/usr/share/man/man1/yara_mapper.1.dh-new debian/seqan-apps/usr/share/man/man1/yara_mapper.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/yara_indexer.1 debian/seqan-apps/usr/share/man/man1/yara_mapper.1
	mv debian/seqan-apps/usr/share/man/man1/snp_store.1.dh-new debian/seqan-apps/usr/share/man/man1/snp_store.1
	mv debian/seqan-apps/usr/share/man/man1/splazers.1.dh-new debian/seqan-apps/usr/share/man/man1/splazers.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/snp_store.1 debian/seqan-apps/usr/share/man/man1/splazers.1
	mv debian/seqan-apps/usr/share/man/man1/stellar.1.dh-new debian/seqan-apps/usr/share/man/man1/stellar.1
	mv debian/seqan-apps/usr/share/man/man1/tree_recon.1.dh-new debian/seqan-apps/usr/share/man/man1/tree_recon.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/stellar.1 debian/seqan-apps/usr/share/man/man1/tree_recon.1
	mv debian/seqan-apps/usr/share/man/man1/sak.1.dh-new debian/seqan-apps/usr/share/man/man1/sak.1
	mv debian/seqan-apps/usr/share/man/man1/seqan_tcoffee.1.dh-new debian/seqan-apps/usr/share/man/man1/seqan_tcoffee.1
	chmod 0644 -- debian/seqan-apps/usr/share/man/man1/sak.1 debian/seqan-apps/usr/share/man/man1/seqan_tcoffee.1
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
   dh_installman -Nseqan-apps
   dh_perl
	rm -f debian/seqan-apps.debhelper.log
   debian/rules override_dh_link-arch
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
dh_link --arch
	rm -f debian/seqan-apps/usr/bin/splazers
	ln -s ../lib/seqan/bin/splazers debian/seqan-apps/usr/bin/splazers
	rm -f debian/seqan-apps/usr/bin/yara_indexer
	ln -s ../lib/seqan/bin/yara_indexer debian/seqan-apps/usr/bin/yara_indexer
	rm -f debian/seqan-apps/usr/bin/rabema_build_gold_standard
	ln -s ../lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/bin/rabema_build_gold_standard
	rm -f debian/seqan-apps/usr/bin/seqan_tcoffee
	ln -s ../lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/bin/seqan_tcoffee
	rm -f debian/seqan-apps/usr/bin/rabema_evaluate
	ln -s ../lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/bin/rabema_evaluate
	rm -f debian/seqan-apps/usr/bin/sak
	ln -s ../lib/seqan/bin/sak debian/seqan-apps/usr/bin/sak
	rm -f debian/seqan-apps/usr/bin/gustaf
	ln -s ../lib/seqan/bin/gustaf debian/seqan-apps/usr/bin/gustaf
	rm -f debian/seqan-apps/usr/bin/insegt
	ln -s ../lib/seqan/bin/insegt debian/seqan-apps/usr/bin/insegt
	rm -f debian/seqan-apps/usr/bin/razers3
	ln -s ../lib/seqan/bin/razers3 debian/seqan-apps/usr/bin/razers3
	rm -f debian/seqan-apps/usr/bin/alf
	ln -s ../lib/seqan/bin/alf debian/seqan-apps/usr/bin/alf
	rm -f debian/seqan-apps/usr/bin/mason_methylation
	ln -s ../lib/seqan/bin/mason_methylation debian/seqan-apps/usr/bin/mason_methylation
	rm -f debian/seqan-apps/usr/bin/stellar
	ln -s ../lib/seqan/bin/stellar debian/seqan-apps/usr/bin/stellar
	rm -f debian/seqan-apps/usr/bin/razers
	ln -s ../lib/seqan/bin/razers debian/seqan-apps/usr/bin/razers
	rm -f debian/seqan-apps/usr/bin/mason_frag_sequencing
	ln -s ../lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/bin/mason_frag_sequencing
	rm -f debian/seqan-apps/usr/bin/mason_genome
	ln -s ../lib/seqan/bin/mason_genome debian/seqan-apps/usr/bin/mason_genome
	rm -f debian/seqan-apps/usr/bin/tree_recon
	ln -s ../lib/seqan/bin/tree_recon debian/seqan-apps/usr/bin/tree_recon
	rm -f debian/seqan-apps/usr/bin/rabema_prepare_sam
	ln -s ../lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/bin/rabema_prepare_sam
	rm -f debian/seqan-apps/usr/bin/yara_mapper
	ln -s ../lib/seqan/bin/yara_mapper debian/seqan-apps/usr/bin/yara_mapper
	rm -f debian/seqan-apps/usr/bin/pair_align
	ln -s ../lib/seqan/bin/pair_align debian/seqan-apps/usr/bin/pair_align
	rm -f debian/seqan-apps/usr/bin/snp_store
	ln -s ../lib/seqan/bin/snp_store debian/seqan-apps/usr/bin/snp_store
	rm -f debian/seqan-apps/usr/bin/micro_razers
	ln -s ../lib/seqan/bin/micro_razers debian/seqan-apps/usr/bin/micro_razers
	rm -f debian/seqan-apps/usr/bin/mason_materializer
	ln -s ../lib/seqan/bin/mason_materializer debian/seqan-apps/usr/bin/mason_materializer
	rm -f debian/seqan-apps/usr/bin/yara_mapper
	ln -s ../lib/seqan/bin/yara_mapper debian/seqan-apps/usr/bin/yara_mapper
	rm -f debian/seqan-apps/usr/bin/yara_indexer
	ln -s ../lib/seqan/bin/yara_indexer debian/seqan-apps/usr/bin/yara_indexer
	rm -f debian/seqan-apps/usr/bin/tree_recon
	ln -s ../lib/seqan/bin/tree_recon debian/seqan-apps/usr/bin/tree_recon
	rm -f debian/seqan-apps/usr/bin/stellar
	ln -s ../lib/seqan/bin/stellar debian/seqan-apps/usr/bin/stellar
	rm -f debian/seqan-apps/usr/bin/splazers
	ln -s ../lib/seqan/bin/splazers debian/seqan-apps/usr/bin/splazers
	rm -f debian/seqan-apps/usr/bin/snp_store
	ln -s ../lib/seqan/bin/snp_store debian/seqan-apps/usr/bin/snp_store
	rm -f debian/seqan-apps/usr/bin/seqan_tcoffee
	ln -s ../lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/bin/seqan_tcoffee
	rm -f debian/seqan-apps/usr/bin/sak
	ln -s ../lib/seqan/bin/sak debian/seqan-apps/usr/bin/sak
	rm -f debian/seqan-apps/usr/bin/razers3
	ln -s ../lib/seqan/bin/razers3 debian/seqan-apps/usr/bin/razers3
	rm -f debian/seqan-apps/usr/bin/razers
	ln -s ../lib/seqan/bin/razers debian/seqan-apps/usr/bin/razers
	rm -f debian/seqan-apps/usr/bin/rabema_prepare_sam
	ln -s ../lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/bin/rabema_prepare_sam
	rm -f debian/seqan-apps/usr/bin/rabema_evaluate
	ln -s ../lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/bin/rabema_evaluate
	rm -f debian/seqan-apps/usr/bin/rabema_build_gold_standard
	ln -s ../lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/bin/rabema_build_gold_standard
	rm -f debian/seqan-apps/usr/bin/pair_align
	ln -s ../lib/seqan/bin/pair_align debian/seqan-apps/usr/bin/pair_align
	rm -f debian/seqan-apps/usr/bin/micro_razers
	ln -s ../lib/seqan/bin/micro_razers debian/seqan-apps/usr/bin/micro_razers
	rm -f debian/seqan-apps/usr/bin/mason_methylation
	ln -s ../lib/seqan/bin/mason_methylation debian/seqan-apps/usr/bin/mason_methylation
	rm -f debian/seqan-apps/usr/bin/mason_materializer
	ln -s ../lib/seqan/bin/mason_materializer debian/seqan-apps/usr/bin/mason_materializer
	rm -f debian/seqan-apps/usr/bin/mason_genome
	ln -s ../lib/seqan/bin/mason_genome debian/seqan-apps/usr/bin/mason_genome
	rm -f debian/seqan-apps/usr/bin/mason_frag_sequencing
	ln -s ../lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/bin/mason_frag_sequencing
	rm -f debian/seqan-apps/usr/bin/insegt
	ln -s ../lib/seqan/bin/insegt debian/seqan-apps/usr/bin/insegt
	rm -f debian/seqan-apps/usr/bin/gustaf
	ln -s ../lib/seqan/bin/gustaf debian/seqan-apps/usr/bin/gustaf
	rm -f debian/seqan-apps/usr/bin/alf
	ln -s ../lib/seqan/bin/alf debian/seqan-apps/usr/bin/alf
# Some binaries (eg. splazer) are not built in 32-bit architectures so
# remove their (broken) symlinks.
if [ -d /build/reproducible-path/seqan2-2.4.0+dfsg/debian/seqan-apps/usr/bin ] ; then \
    find /build/reproducible-path/seqan2-2.4.0+dfsg/debian/seqan-apps/usr/bin -type l -xtype l -delete ; \
fi
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
   dh_link -Nseqan-apps
   dh_strip_nondeterminism
	Using 1705323437 as canonical time
	Normalizing debian/seqan-apps/usr/share/doc/seqan-apps/ngs_roi/R/ngsroi_0.1.tar.gz using File::StripNondeterminism::handlers::gzip
	Normalizing debian/seqan-apps/usr/share/doc/seqan-apps/ngs_roi/R/ngsroi_0.1.zip using File::StripNondeterminism::handlers::zip
   dh_compress
	cd debian/seqan-apps
	cd debian/libseqan2-dev
	chmod a-x usr/share/doc/libseqan2-dev/changelog usr/share/doc/libseqan2-dev/changelog.Debian
	gzip -9nf usr/share/doc/libseqan2-dev/changelog usr/share/doc/libseqan2-dev/changelog.Debian
	chmod a-x usr/share/doc/seqan-apps/alf/README usr/share/doc/seqan-apps/changelog usr/share/doc/seqan-apps/changelog.Debian usr/share/doc/seqan-apps/dfi/README usr/share/doc/seqan-apps/fiona/example/reads.fa usr/share/doc/seqan-apps/gustaf/README usr/share/doc/seqan-apps/gustaf/example/adeno.fa usr/share/doc/seqan-apps/gustaf/example/adeno_modified.fa usr/share/doc/seqan-apps/insegt/README usr/share/doc/seqan-apps/mason2/README.mason_methylation usr/share/doc/seqan-apps/mason2/README.mason_simulator usr/share/doc/seqan-apps/mason2/README.mason_variator usr/share/doc/seqan-apps/mason2/example/adeno_virus.fa usr/share/doc/seqan-apps/micro_razers/README usr/share/doc/seqan-apps/ngs_roi/README usr/share/doc/seqan-apps/ngs_roi/example/dmel.bed usr/share/doc/seqan-apps/ngs_roi/example/dmel.gtf usr/share/doc/seqan-apps/ngs_roi/example/example.bam usr/share/doc/seqan-apps/rabema/README usr/share/doc/seqan-apps/razers/README usr/share/doc/seqan-apps/razers3/README usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A00 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A01 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B00 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B01 usr/share/doc/seqan-apps/snp_store/README usr/share/doc/seqan-apps/snp_store/example/exampleGenome.fa usr/share/doc/seqan-apps/splazers/README usr/share/doc/seqan-apps/stellar/README usr/share/doc/seqan-apps/stellar/example/NC_001474.fasta usr/share/doc/seqan-apps/stellar/example/NC_001477.fasta usr/share/doc/seqan-apps/yara/README.rst usr/share/man/man1/alf.1 usr/share/man/man1/gustaf.1 usr/share/man/man1/insegt.1 usr/share/man/man1/mason_frag_sequencing.1 usr/share/man/man1/mason_genome.1 usr/share/man/man1/mason_materializer.1 usr/share/man/man1/mason_methylation.1 usr/share/man/man1/micro_razers.1 usr/share/man/man1/pair_align.1 usr/share/man/man1/rabema_build_gold_standard.1 usr/share/man/man1/rabema_evaluate.1 usr/share/man/man1/rabema_prepare_sam.1 usr/share/man/man1/razers.1 usr/share/man/man1/razers3.1 usr/share/man/man1/sak.1 usr/share/man/man1/seqan_tcoffee.1 usr/share/man/man1/snp_store.1 usr/share/man/man1/splazers.1 usr/share/man/man1/stellar.1 usr/share/man/man1/tree_recon.1 usr/share/man/man1/yara_indexer.1 usr/share/man/man1/yara_mapper.1
	gzip -9nf usr/share/doc/seqan-apps/alf/README usr/share/doc/seqan-apps/changelog usr/share/doc/seqan-apps/changelog.Debian usr/share/doc/seqan-apps/dfi/README usr/share/doc/seqan-apps/fiona/example/reads.fa usr/share/doc/seqan-apps/gustaf/README usr/share/doc/seqan-apps/gustaf/example/adeno.fa usr/share/doc/seqan-apps/gustaf/example/adeno_modified.fa usr/share/doc/seqan-apps/insegt/README usr/share/doc/seqan-apps/mason2/README.mason_methylation usr/share/doc/seqan-apps/mason2/README.mason_simulator usr/share/doc/seqan-apps/mason2/README.mason_variator usr/share/doc/seqan-apps/mason2/example/adeno_virus.fa usr/share/doc/seqan-apps/micro_razers/README usr/share/doc/seqan-apps/ngs_roi/README usr/share/doc/seqan-apps/ngs_roi/example/dmel.bed usr/share/doc/seqan-apps/ngs_roi/example/dmel.gtf usr/share/doc/seqan-apps/ngs_roi/example/example.bam usr/share/doc/seqan-apps/rabema/README usr/share/doc/seqan-apps/razers/README usr/share/doc/seqan-apps/razers3/README usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A00 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A01 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B00 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B01 usr/share/doc/seqan-apps/snp_store/README usr/share/doc/seqan-apps/snp_store/example/exampleGenome.fa usr/share/doc/seqan-apps/splazers/README usr/share/doc/seqan-apps/stellar/README usr/share/doc/seqan-apps/stellar/example/NC_001474.fasta usr/share/doc/seqan-apps/stellar/example/NC_001477.fasta usr/share/doc/seqan-apps/yara/README.rst usr/share/man/man1/alf.1 usr/share/man/man1/gustaf.1 usr/share/man/man1/insegt.1 usr/share/man/man1/mason_frag_sequencing.1 usr/share/man/man1/mason_genome.1 usr/share/man/man1/mason_materializer.1 usr/share/man/man1/mason_methylation.1 usr/share/man/man1/micro_razers.1 usr/share/man/man1/pair_align.1 usr/share/man/man1/rabema_build_gold_standard.1 usr/share/man/man1/rabema_evaluate.1 usr/share/man/man1/rabema_prepare_sam.1 usr/share/man/man1/razers.1 usr/share/man/man1/razers3.1 usr/share/man/man1/sak.1 usr/share/man/man1/seqan_tcoffee.1 usr/share/man/man1/snp_store.1 usr/share/man/man1/splazers.1 usr/share/man/man1/stellar.1 usr/share/man/man1/tree_recon.1 usr/share/man/man1/yara_indexer.1 usr/share/man/man1/yara_mapper.1
	cd '/build/reproducible-path/seqan2-2.4.0+dfsg'
	cd '/build/reproducible-path/seqan2-2.4.0+dfsg'
	rm -f debian/seqan-apps.debhelper.log
   debian/rules override_dh_fixperms-arch
make[1]: Entering directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
dh_fixperms --arch
	find debian/seqan-apps ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/seqan-apps/usr/share/doc -type f -a -true -a ! -regex 'debian/seqan-apps/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/seqan-apps/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/seqan-apps/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/seqan-apps -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/seqan-apps/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
	find debian/seqan-apps/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
for bin in `ls /build/reproducible-path/seqan2-2.4.0+dfsg/debian/seqan-apps/usr/lib/seqan/bin/*.sh` ; do \
    chmod +x /build/reproducible-path/seqan2-2.4.0+dfsg/debian/seqan-apps/usr/lib/seqan/bin/`basename ${bin}` ; \
done
make[1]: Leaving directory '/build/reproducible-path/seqan2-2.4.0+dfsg'
   dh_fixperms -Nseqan-apps
	find debian/libseqan2-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/libseqan2-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libseqan2-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libseqan2-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/libseqan2-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/libseqan2-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
   dh_missing
   dh_dwz -a
	install -m0755 -d debian/seqan-apps/usr/lib/debug/.dwz/x86_64-linux-gnu
	dwz -mdebian/seqan-apps/usr/lib/debug/.dwz/x86_64-linux-gnu/seqan-apps.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/seqan-apps.debug -- debian/seqan-apps/usr/lib/seqan/bin/alf debian/seqan-apps/usr/lib/seqan/bin/bam2roi debian/seqan-apps/usr/lib/seqan/bin/bisar debian/seqan-apps/usr/lib/seqan/bin/casbar debian/seqan-apps/usr/lib/seqan/bin/compute_gain debian/seqan-apps/usr/lib/seqan/bin/dfi debian/seqan-apps/usr/lib/seqan/bin/fiona debian/seqan-apps/usr/lib/seqan/bin/fiona_illumina debian/seqan-apps/usr/lib/seqan/bin/four2three debian/seqan-apps/usr/lib/seqan/bin/fx_bam_coverage debian/seqan-apps/usr/lib/seqan/bin/gustaf debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining debian/seqan-apps/usr/lib/seqan/bin/insegt debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/lib/seqan/bin/mason_genome debian/seqan-apps/usr/lib/seqan/bin/mason_materializer debian/seqan-apps/usr/lib/seqan/bin/mason_methylation debian/seqan-apps/usr/lib/seqan/bin/mason_simulator debian/seqan-apps/usr/lib/seqan/bin/mason_splicing debian/seqan-apps/usr/lib/seqan/bin/mason_variator debian/seqan-apps/usr/lib/seqan/bin/micro_razers debian/seqan-apps/usr/lib/seqan/bin/pair_align debian/seqan-apps/usr/lib/seqan/bin/param_chooser debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/lib/seqan/bin/razers debian/seqan-apps/usr/lib/seqan/bin/razers3 debian/seqan-apps/usr/lib/seqan/bin/rep_sep debian/seqan-apps/usr/lib/seqan/bin/roi_feature_projection debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails debian/seqan-apps/usr/lib/seqan/bin/s4_join debian/seqan-apps/usr/lib/seqan/bin/s4_search debian/seqan-apps/usr/lib/seqan/bin/sak debian/seqan-apps/usr/lib/seqan/bin/sam2matrix debian/seqan-apps/usr/lib/seqan/bin/samcat debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/lib/seqan/bin/seqcons2 debian/seqan-apps/usr/lib/seqan/bin/sgip debian/seqan-apps/usr/lib/seqan/bin/snp_store debian/seqan-apps/usr/lib/seqan/bin/splazers debian/seqan-apps/usr/lib/seqan/bin/stellar debian/seqan-apps/usr/lib/seqan/bin/tree_recon debian/seqan-apps/usr/lib/seqan/bin/yara_indexer debian/seqan-apps/usr/lib/seqan/bin/yara_mapper
	objcopy --compress-debug-sections debian/seqan-apps/usr/lib/debug/.dwz/x86_64-linux-gnu/seqan-apps.debug
	chmod 0644 -- debian/seqan-apps/usr/lib/debug/.dwz/x86_64-linux-gnu/seqan-apps.debug
   dh_strip -a
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0d
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0d/b9622231b90ca08689a4de4e5c80a36beabbe0.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0d/b9622231b90ca08689a4de4e5c80a36beabbe0.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0d/b9622231b90ca08689a4de4e5c80a36beabbe0.debug debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ed
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/fx_bam_coverage debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ed/d91a62f8fa2a9d556864fe5ed5467c9b236e52.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ed/d91a62f8fa2a9d556864fe5ed5467c9b236e52.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/fx_bam_coverage
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ed/d91a62f8fa2a9d556864fe5ed5467c9b236e52.debug debian/seqan-apps/usr/lib/seqan/bin/fx_bam_coverage
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c1
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/bisar debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c1/f8a70b3138647f56854d761deb552d8dc20779.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c1/f8a70b3138647f56854d761deb552d8dc20779.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/bisar
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c1/f8a70b3138647f56854d761deb552d8dc20779.debug debian/seqan-apps/usr/lib/seqan/bin/bisar
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d0
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/param_chooser debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d0/f36310b05f4506a186fa9f475716c82423f5cd.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d0/f36310b05f4506a186fa9f475716c82423f5cd.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/param_chooser
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d0/f36310b05f4506a186fa9f475716c82423f5cd.debug debian/seqan-apps/usr/lib/seqan/bin/param_chooser
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/40
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_materializer debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/40/b82f32d54ea6cf7d18242319e4c236a8be8ee7.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/40/b82f32d54ea6cf7d18242319e4c236a8be8ee7.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_materializer
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/40/b82f32d54ea6cf7d18242319e4c236a8be8ee7.debug debian/seqan-apps/usr/lib/seqan/bin/mason_materializer
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/86
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/samcat debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/86/690d253590d0483ba2b977e5ccd72b543477c9.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/86/690d253590d0483ba2b977e5ccd72b543477c9.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/samcat
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/86/690d253590d0483ba2b977e5ccd72b543477c9.debug debian/seqan-apps/usr/lib/seqan/bin/samcat
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/05
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/fiona_illumina debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/05/628e7336862f3b7d07c2dcb865590519b47898.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/05/628e7336862f3b7d07c2dcb865590519b47898.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/fiona_illumina
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/05/628e7336862f3b7d07c2dcb865590519b47898.debug debian/seqan-apps/usr/lib/seqan/bin/fiona_illumina
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/b2
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/seqcons2 debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/b2/9d5082ef44ff3287c6a1adb482d8dbfb7f17bf.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/b2/9d5082ef44ff3287c6a1adb482d8dbfb7f17bf.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/seqcons2
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/b2/9d5082ef44ff3287c6a1adb482d8dbfb7f17bf.debug debian/seqan-apps/usr/lib/seqan/bin/seqcons2
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/83
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/micro_razers debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/83/01085bb7e52026488180a7eda6e99f2194a38a.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/83/01085bb7e52026488180a7eda6e99f2194a38a.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/micro_razers
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/83/01085bb7e52026488180a7eda6e99f2194a38a.debug debian/seqan-apps/usr/lib/seqan/bin/micro_razers
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/7c
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/7c/65aa59bccf0a653364408b89f0baacbca1b983.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/7c/65aa59bccf0a653364408b89f0baacbca1b983.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/7c/65aa59bccf0a653364408b89f0baacbca1b983.debug debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e6
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_simulator debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e6/11e5736e55fe1cef54f26fdd3cfd70b4dd0dfc.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e6/11e5736e55fe1cef54f26fdd3cfd70b4dd0dfc.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_simulator
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e6/11e5736e55fe1cef54f26fdd3cfd70b4dd0dfc.debug debian/seqan-apps/usr/lib/seqan/bin/mason_simulator
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/27
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/snp_store debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/27/42c6bedc34e7d565a0e96f4cb68d328609235b.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/27/42c6bedc34e7d565a0e96f4cb68d328609235b.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/snp_store
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/27/42c6bedc34e7d565a0e96f4cb68d328609235b.debug debian/seqan-apps/usr/lib/seqan/bin/snp_store
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ec
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/pair_align debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ec/09b52df22cd6d6836ce351a8207f87b5df1281.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ec/09b52df22cd6d6836ce351a8207f87b5df1281.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/pair_align
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ec/09b52df22cd6d6836ce351a8207f87b5df1281.debug debian/seqan-apps/usr/lib/seqan/bin/pair_align
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/38
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_splicing debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/38/5ce89870632f74f866df16fe5d09391812bc50.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/38/5ce89870632f74f866df16fe5d09391812bc50.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_splicing
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/38/5ce89870632f74f866df16fe5d09391812bc50.debug debian/seqan-apps/usr/lib/seqan/bin/mason_splicing
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/7f
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/yara_mapper debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/7f/20e38368430f2fb3b12e7056e17e30d84a15a8.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/7f/20e38368430f2fb3b12e7056e17e30d84a15a8.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/yara_mapper
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/7f/20e38368430f2fb3b12e7056e17e30d84a15a8.debug debian/seqan-apps/usr/lib/seqan/bin/yara_mapper
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/33
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/fiona debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/33/6a82d09f4be0806a9ee14cba21667b3e35190c.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/33/6a82d09f4be0806a9ee14cba21667b3e35190c.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/fiona
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/33/6a82d09f4be0806a9ee14cba21667b3e35190c.debug debian/seqan-apps/usr/lib/seqan/bin/fiona
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ba
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/rabema_prepare_sam debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ba/fbca320a6b02155f596e5e5434648666ff24c7.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ba/fbca320a6b02155f596e5e5434648666ff24c7.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/rabema_prepare_sam
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ba/fbca320a6b02155f596e5e5434648666ff24c7.debug debian/seqan-apps/usr/lib/seqan/bin/rabema_prepare_sam
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/35
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_variator debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/35/8bfdd21a6e862563560b54135f131c0e6c6a86.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/35/8bfdd21a6e862563560b54135f131c0e6c6a86.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_variator
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/35/8bfdd21a6e862563560b54135f131c0e6c6a86.debug debian/seqan-apps/usr/lib/seqan/bin/mason_variator
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a8
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/tree_recon debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a8/b19facedbe8ecd31710bd8b2842b2dbb97ad45.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a8/b19facedbe8ecd31710bd8b2842b2dbb97ad45.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/tree_recon
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a8/b19facedbe8ecd31710bd8b2842b2dbb97ad45.debug debian/seqan-apps/usr/lib/seqan/bin/tree_recon
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a6
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_genome debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a6/aaa7bb1c4e8fe9dba00a61e5b3ed35b3ebb603.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a6/aaa7bb1c4e8fe9dba00a61e5b3ed35b3ebb603.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_genome
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a6/aaa7bb1c4e8fe9dba00a61e5b3ed35b3ebb603.debug debian/seqan-apps/usr/lib/seqan/bin/mason_genome
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/19
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/rep_sep debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/19/38540ef6048539bd746f397604f72c8c44a490.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/19/38540ef6048539bd746f397604f72c8c44a490.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/rep_sep
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/19/38540ef6048539bd746f397604f72c8c44a490.debug debian/seqan-apps/usr/lib/seqan/bin/rep_sep
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/30
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/30/47b392dc768626c564c02c7d953503726a4238.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/30/47b392dc768626c564c02c7d953503726a4238.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/30/47b392dc768626c564c02c7d953503726a4238.debug debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/49
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/compute_gain debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/49/656046490405561434c5161cb617693768ef70.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/49/656046490405561434c5161cb617693768ef70.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/compute_gain
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/49/656046490405561434c5161cb617693768ef70.debug debian/seqan-apps/usr/lib/seqan/bin/compute_gain
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/5c
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/razers debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/5c/5c2f251b779c7f5583ea5196088ab740b965d7.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/5c/5c2f251b779c7f5583ea5196088ab740b965d7.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/razers
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/5c/5c2f251b779c7f5583ea5196088ab740b965d7.debug debian/seqan-apps/usr/lib/seqan/bin/razers
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ed
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/stellar debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ed/ded244e0f450bafa1a8a8b696e39298b448178.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ed/ded244e0f450bafa1a8a8b696e39298b448178.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/stellar
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ed/ded244e0f450bafa1a8a8b696e39298b448178.debug debian/seqan-apps/usr/lib/seqan/bin/stellar
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/eb
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/roi_feature_projection debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/eb/9728b5c730a893699f440dc2646b0c07ad540d.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/eb/9728b5c730a893699f440dc2646b0c07ad540d.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/roi_feature_projection
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/eb/9728b5c730a893699f440dc2646b0c07ad540d.debug debian/seqan-apps/usr/lib/seqan/bin/roi_feature_projection
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a7
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/four2three debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a7/8272a235f82ace4efca57842e8c3d6b29afb63.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a7/8272a235f82ace4efca57842e8c3d6b29afb63.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/four2three
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a7/8272a235f82ace4efca57842e8c3d6b29afb63.debug debian/seqan-apps/usr/lib/seqan/bin/four2three
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/50
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_methylation debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/50/952003233466681460aa8591e8737130789cce.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/50/952003233466681460aa8591e8737130789cce.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_methylation
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/50/952003233466681460aa8591e8737130789cce.debug debian/seqan-apps/usr/lib/seqan/bin/mason_methylation
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/14
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/bam2roi debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/14/347110adb2077511fce2067822bbf33ef71b1f.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/14/347110adb2077511fce2067822bbf33ef71b1f.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/bam2roi
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/14/347110adb2077511fce2067822bbf33ef71b1f.debug debian/seqan-apps/usr/lib/seqan/bin/bam2roi
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/07
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/alf debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/07/94c5f7e18a039666ab2c65a408b519ed45eff7.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/07/94c5f7e18a039666ab2c65a408b519ed45eff7.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/alf
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/07/94c5f7e18a039666ab2c65a408b519ed45eff7.debug debian/seqan-apps/usr/lib/seqan/bin/alf
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ad
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/casbar debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ad/d4b038ac3f0931630dcb6ac6b4cabd663a8ae8.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ad/d4b038ac3f0931630dcb6ac6b4cabd663a8ae8.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/casbar
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ad/d4b038ac3f0931630dcb6ac6b4cabd663a8ae8.debug debian/seqan-apps/usr/lib/seqan/bin/casbar
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c3
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/dfi debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c3/6963ce17a4d95aa8bbf48ded4c65b54660f008.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c3/6963ce17a4d95aa8bbf48ded4c65b54660f008.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/dfi
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c3/6963ce17a4d95aa8bbf48ded4c65b54660f008.debug debian/seqan-apps/usr/lib/seqan/bin/dfi
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/22
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/s4_search debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/22/83ffd80d69e0ad2a1edd532378fd3e4f42ec4a.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/22/83ffd80d69e0ad2a1edd532378fd3e4f42ec4a.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/s4_search
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/22/83ffd80d69e0ad2a1edd532378fd3e4f42ec4a.debug debian/seqan-apps/usr/lib/seqan/bin/s4_search
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/21
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/razers3 debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/21/a7b7016fb65dfca9f5f959bf9b7f2bd838c710.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/21/a7b7016fb65dfca9f5f959bf9b7f2bd838c710.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/razers3
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/21/a7b7016fb65dfca9f5f959bf9b7f2bd838c710.debug debian/seqan-apps/usr/lib/seqan/bin/razers3
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6b
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/insegt debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6b/15839cbfeab4236e79c252cfa8de07aec2df56.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6b/15839cbfeab4236e79c252cfa8de07aec2df56.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/insegt
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6b/15839cbfeab4236e79c252cfa8de07aec2df56.debug debian/seqan-apps/usr/lib/seqan/bin/insegt
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d7
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/s4_join debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d7/4dac4d0dedfdf05a8eb80da43161388af572c0.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d7/4dac4d0dedfdf05a8eb80da43161388af572c0.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/s4_join
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d7/4dac4d0dedfdf05a8eb80da43161388af572c0.debug debian/seqan-apps/usr/lib/seqan/bin/s4_join
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/37
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/sgip debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/37/3e35dfc65fbda498efcee391c9fa81444fa24e.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/37/3e35dfc65fbda498efcee391c9fa81444fa24e.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/sgip
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/37/3e35dfc65fbda498efcee391c9fa81444fa24e.debug debian/seqan-apps/usr/lib/seqan/bin/sgip
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/dc
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/gustaf debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/dc/f10b5844d08870f88a57f667ae8fc8ecba6d88.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/dc/f10b5844d08870f88a57f667ae8fc8ecba6d88.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/gustaf
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/dc/f10b5844d08870f88a57f667ae8fc8ecba6d88.debug debian/seqan-apps/usr/lib/seqan/bin/gustaf
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/43
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/sak debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/43/fc3ebaa9b4324877803b8aceb60d6ba9c25751.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/43/fc3ebaa9b4324877803b8aceb60d6ba9c25751.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/sak
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/43/fc3ebaa9b4324877803b8aceb60d6ba9c25751.debug debian/seqan-apps/usr/lib/seqan/bin/sak
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/17
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/17/a9cf47321344ba9e280fb962b643aafd216ba6.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/17/a9cf47321344ba9e280fb962b643aafd216ba6.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/17/a9cf47321344ba9e280fb962b643aafd216ba6.debug debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e9
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e9/0d6d5f43d8dbe83f32079d046acdb559fcbca6.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e9/0d6d5f43d8dbe83f32079d046acdb559fcbca6.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e9/0d6d5f43d8dbe83f32079d046acdb559fcbca6.debug debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a9
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a9/0114852b8c5b404eea20da755481333c011e1f.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a9/0114852b8c5b404eea20da755481333c011e1f.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a9/0114852b8c5b404eea20da755481333c011e1f.debug debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/57
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/yara_indexer debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/57/c62413d3eccc97421d9650f820f93c89aa6010.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/57/c62413d3eccc97421d9650f820f93c89aa6010.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/yara_indexer
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/57/c62413d3eccc97421d9650f820f93c89aa6010.debug debian/seqan-apps/usr/lib/seqan/bin/yara_indexer
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/b8
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/splazers debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/b8/8c2448a978b7d57714295cc8e7bb4ab1cb3ab7.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/b8/8c2448a978b7d57714295cc8e7bb4ab1cb3ab7.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/splazers
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/b8/8c2448a978b7d57714295cc8e7bb4ab1cb3ab7.debug debian/seqan-apps/usr/lib/seqan/bin/splazers
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/20
	objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/sam2matrix debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/20/71261d3dd9f28b1e0e4ff9078c96c7c9518063.debug
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/20/71261d3dd9f28b1e0e4ff9078c96c7c9518063.debug
	strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/sam2matrix
	objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/20/71261d3dd9f28b1e0e4ff9078c96c7c9518063.debug debian/seqan-apps/usr/lib/seqan/bin/sam2matrix
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.dwz
	cp --reflink=auto -a debian/seqan-apps/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.dwz
	rm -fr debian/seqan-apps/usr/lib/debug/.dwz
	rmdir -p --ignore-fail-on-non-empty debian/seqan-apps/usr/lib/debug
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/share/doc
	ln -s seqan-apps debian/.debhelper/seqan-apps/dbgsym-root/usr/share/doc/seqan-apps-dbgsym
	install -m0755 -d debian/.debhelper/seqan-apps
   dh_makeshlibs -a
	rm -f debian/seqan-apps/DEBIAN/shlibs
   dh_shlibdeps -a
	install -m0755 -d debian/seqan-apps/DEBIAN
	dpkg-shlibdeps -Tdebian/seqan-apps.substvars debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining debian/seqan-apps/usr/lib/seqan/bin/fx_bam_coverage debian/seqan-apps/usr/lib/seqan/bin/bisar debian/seqan-apps/usr/lib/seqan/bin/param_chooser debian/seqan-apps/usr/lib/seqan/bin/mason_materializer debian/seqan-apps/usr/lib/seqan/bin/samcat debian/seqan-apps/usr/lib/seqan/bin/fiona_illumina debian/seqan-apps/usr/lib/seqan/bin/seqcons2 debian/seqan-apps/usr/lib/seqan/bin/micro_razers debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails debian/seqan-apps/usr/lib/seqan/bin/mason_simulator debian/seqan-apps/usr/lib/seqan/bin/snp_store debian/seqan-apps/usr/lib/seqan/bin/pair_align debian/seqan-apps/usr/lib/seqan/bin/mason_splicing debian/seqan-apps/usr/lib/seqan/bin/yara_mapper debian/seqan-apps/usr/lib/seqan/bin/fiona debian/seqan-apps/usr/lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/lib/seqan/bin/mason_variator debian/seqan-apps/usr/lib/seqan/bin/tree_recon debian/seqan-apps/usr/lib/seqan/bin/mason_genome debian/seqan-apps/usr/lib/seqan/bin/rep_sep debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/lib/seqan/bin/compute_gain debian/seqan-apps/usr/lib/seqan/bin/razers debian/seqan-apps/usr/lib/seqan/bin/stellar debian/seqan-apps/usr/lib/seqan/bin/roi_feature_projection debian/seqan-apps/usr/lib/seqan/bin/four2three debian/seqan-apps/usr/lib/seqan/bin/mason_methylation debian/seqan-apps/usr/lib/seqan/bin/bam2roi debian/seqan-apps/usr/lib/seqan/bin/alf debian/seqan-apps/usr/lib/seqan/bin/casbar debian/seqan-apps/usr/lib/seqan/bin/dfi debian/seqan-apps/usr/lib/seqan/bin/s4_search debian/seqan-apps/usr/lib/seqan/bin/razers3 debian/seqan-apps/usr/lib/seqan/bin/insegt debian/seqan-apps/usr/lib/seqan/bin/s4_join debian/seqan-apps/usr/lib/seqan/bin/sgip debian/seqan-apps/usr/lib/seqan/bin/gustaf debian/seqan-apps/usr/lib/seqan/bin/sak debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/lib/seqan/bin/yara_indexer debian/seqan-apps/usr/lib/seqan/bin/splazers debian/seqan-apps/usr/lib/seqan/bin/sam2matrix
   dh_installdeb
	install -m0755 -d debian/seqan-apps/DEBIAN
	install -m0755 -d debian/libseqan2-dev/DEBIAN
   dh_gencontrol
	install -m0755 -d debian/seqan-apps/DEBIAN
	echo misc:Depends= >> debian/seqan-apps.substvars
	echo misc:Pre-Depends= >> debian/seqan-apps.substvars
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/DEBIAN
	dpkg-gencontrol -pseqan-apps -ldebian/changelog -Tdebian/seqan-apps.substvars -cdebian/control -Pdebian/.debhelper/seqan-apps/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=seqan-apps-dbgsym "-DDepends=seqan-apps (= \${binary:Version})" "-DDescription=debug symbols for seqan-apps" "-DBuild-Ids=05628e7336862f3b7d07c2dcb865590519b47898 0794c5f7e18a039666ab2c65a408b519ed45eff7 0db9622231b90ca08689a4de4e5c80a36beabbe0 14347110adb2077511fce2067822bbf33ef71b1f 17a9cf47321344ba9e280fb962b643aafd216ba6 1938540ef6048539bd746f397604f72c8c44a490 2071261d3dd9f28b1e0e4ff9078c96c7c9518063 21a7b7016fb65dfca9f5f959bf9b7f2bd838c710 2283ffd80d69e0ad2a1edd532378fd3e4f42ec4a 2742c6bedc34e7d565a0e96f4cb68d328609235b 3047b392dc768626c564c02c7d953503726a4238 336a82d09f4be0806a9ee14cba21667b3e35190c 358bfdd21a6e862563560b54135f131c0e6c6a86 373e35dfc65fbda498efcee391c9fa81444fa24e 385ce89870632f74f866df16fe5d09391812bc50 40b82f32d54ea6cf7d18242319e4c236a8be8ee7 43fc3ebaa9b4324877803b8aceb60d6ba9c25751 49656046490405561434c5161cb617693768ef70 50952003233466681460aa8591e8737130789cce 57c62413d3eccc97421d9650f820f93c89aa6010 5c5c2f251b779c7f5583ea5196088ab740b965d7 6b15839cbfeab4236e79c252cfa8de07aec2df56 7c65aa59bccf0a653364408b89f0baacbca1b983 7f20e38368430f2fb3b12e7056e17e30d84a15a8 8301085bb7e52026488180a7eda6e99f2194a38a 86690d253590d0483ba2b977e5ccd72b543477c9 a6aaa7bb1c4e8fe9dba00a61e5b3ed35b3ebb603 a78272a235f82ace4efca57842e8c3d6b29afb63 a8b19facedbe8ecd31710bd8b2842b2dbb97ad45 a90114852b8c5b404eea20da755481333c011e1f add4b038ac3f0931630dcb6ac6b4cabd663a8ae8 b29d5082ef44ff3287c6a1adb482d8dbfb7f17bf b88c2448a978b7d57714295cc8e7bb4ab1cb3ab7 bafbca320a6b02155f596e5e5434648666ff24c7 c1f8a70b3138647f56854d761deb552d8dc20779 c36963ce17a4d95aa8bbf48ded4c65b54660f008 d0f36310b05f4506a186fa9f475716c82423f5cd d74dac4d0dedfdf05a8eb80da43161388af572c0 dcf10b5844d08870f88a57f667ae8fc8ecba6d88 e611e5736e55fe1cef54f26fdd3cfd70b4dd0dfc e90d6d5f43d8dbe83f32079d046acdb559fcbca6 eb9728b5c730a893699f440dc2646b0c07ad540d ec09b52df22cd6d6836ce351a8207f87b5df1281 edd91a62f8fa2a9d556864fe5ed5467c9b236e52 edded244e0f450bafa1a8a8b696e39298b448178" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
	install -m0755 -d debian/libseqan2-dev/DEBIAN
	echo misc:Depends= >> debian/libseqan2-dev.substvars
	echo misc:Pre-Depends= >> debian/libseqan2-dev.substvars
	dpkg-gencontrol -plibseqan2-dev -ldebian/changelog -Tdebian/libseqan2-dev.substvars -cdebian/control -Pdebian/libseqan2-dev
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/DEBIAN/control
	dpkg-gencontrol -pseqan-apps -ldebian/changelog -Tdebian/seqan-apps.substvars -cdebian/control -Pdebian/seqan-apps
	chmod 0644 -- debian/libseqan2-dev/DEBIAN/control
	chmod 0644 -- debian/seqan-apps/DEBIAN/control
   dh_md5sums
	install -m0755 -d debian/seqan-apps/DEBIAN
	install -m0755 -d debian/libseqan2-dev/DEBIAN
	cd debian/seqan-apps >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	cd debian/libseqan2-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/libseqan2-dev/DEBIAN/md5sums
	chmod 0644 -- debian/seqan-apps/DEBIAN/md5sums
	install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/DEBIAN
	cd debian/.debhelper/seqan-apps/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/DEBIAN/md5sums
   dh_builddeb
	dpkg-deb --root-owner-group --build debian/seqan-apps ..
	dpkg-deb --root-owner-group --build debian/.debhelper/seqan-apps/dbgsym-root ..
	dpkg-deb --root-owner-group --build debian/libseqan2-dev ..
dpkg-deb: building package 'libseqan2-dev' in '../libseqan2-dev_2.4.0+dfsg-16_all.deb'.
dpkg-deb: building package 'seqan-apps-dbgsym' in '../seqan-apps-dbgsym_2.4.0+dfsg-16_amd64.deb'.
dpkg-deb: building package 'seqan-apps' in '../seqan-apps_2.4.0+dfsg-16_amd64.deb'.
 dpkg-genbuildinfo --build=binary -O../seqan2_2.4.0+dfsg-16_amd64.buildinfo
 dpkg-genchanges --build=binary -O../seqan2_2.4.0+dfsg-16_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: user script /srv/workspace/pbuilder/1262419/tmp/hooks/B01_cleanup starting
I: user script /srv/workspace/pbuilder/1262419/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/1262419 and its subdirectories
I: Current time: Sun May 19 14:13:47 +14 2024
I: pbuilder-time-stamp: 1716077627